Jatropha Genome Database

JcCA0116921.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0116921.10 - phase: 0 /partial
         (195 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29986.m001664 aspartate ammonia lyase, putative                       341   1e-94

>29986.m001664 aspartate ammonia lyase, putative
          Length = 470

 Score =  341 bits (874), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 164/170 (96%), Positives = 168/170 (98%)

Query: 1   AAHDAFVESSGALNTIATSLMKVANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT 60
           AAHDAFVESSGALNTIATSLMK+AND+RLLGSGPRCGLGELILPENEPGSSIMPGKVNPT
Sbjct: 300 AAHDAFVESSGALNTIATSLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT 359

Query: 61  QCEALTMVCAQGMGNHVAITVGGSNGHFELNVFKPMIASNLLHSVRLLGDASASFEKNCV 120
           QCEALTMVCAQ MGNHVA+TVGGSNGHFELNVFKPMIASNLLHSVRLLGDASASFEKNCV
Sbjct: 360 QCEALTMVCAQVMGNHVAVTVGGSNGHFELNVFKPMIASNLLHSVRLLGDASASFEKNCV 419

Query: 121 RGIQANRERISKLLHESLMLVTALNPKIGYDNAAAVAKLAHKEGSTLKVI 170
           RGIQANRERISKLLHESLMLVT+LNPKIGYDNAAAVAKLAHKEGSTLK I
Sbjct: 420 RGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKLAHKEGSTLKGI 469