Jatropha Genome Database

JcCA0116171.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0116171.10 - phase: 0 
         (268 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29709.m001210 malic enzyme, putative                                  473   e-134
30174.m008988 malic enzyme, putative                                  326   8e-90
29794.m003406 malic enzyme, putative                                  196   1e-50
30146.m003510 malic enzyme, putative                                  190   5e-49
29912.m005447 malic enzyme, putative                                  189   1e-48

>29709.m001210 malic enzyme, putative
          Length = 626

 Score =  473 bits (1218), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 229/259 (88%), Positives = 236/259 (91%), Gaps = 3/259 (1%)

Query: 1   MSNFSKQIRASSSLINRLKQKMTNPDVLTQTSRSFTTTEGHRPTIVHKRSLDILHDPWFN 60
           MSNFS QIRAS+SLI RLK ++ NP +L Q SRSFTTTEGHRPTIVHKRSLDILHDPWFN
Sbjct: 1   MSNFSNQIRASASLIKRLKDRLANPALLNQ-SRSFTTTEGHRPTIVHKRSLDILHDPWFN 59

Query: 61  KGTAFSMTEXXXXXXXXXXPPNVMSPEQQIERFMADLKRLEVHARDGPSDPNYLAKWRIL 120
           KGTAFSMTE          PPN+MS EQQIERFMADLKRLEVHARDGPSDPN LAKWRIL
Sbjct: 60  KGTAFSMTERDRLDLRGLLPPNIMSSEQQIERFMADLKRLEVHARDGPSDPNALAKWRIL 119

Query: 121 NRLHDRNETMYYKVLIANIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSAADRGEMMS 180
           NRLHDRNETMYYKVLIANIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSAADRGEMMS
Sbjct: 120 NRLHDRNETMYYKVLIANIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSAADRGEMMS 179

Query: 181 MVYNWPAEQVDMIVVTDGSRILGLGDLGVQGIGIAIGKLDLYVAAAGINPQRVLPVMIDV 240
           MVYNWPAEQVDMIVVTDGSRILGLGDLGVQGIGIAIGKLDLYVAAAGINPQRVLPVMIDV
Sbjct: 180 MVYNWPAEQVDMIVVTDGSRILGLGDLGVQGIGIAIGKLDLYVAAAGINPQRVLPVMIDV 239

Query: 241 GTNNEKLLKNPLCKYFSVQ 259
           GTNNEKLLK+PL  Y  +Q
Sbjct: 240 GTNNEKLLKDPL--YLGLQ 256


>30174.m008988 malic enzyme, putative
          Length = 602

 Score =  326 bits (835), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 156/221 (70%), Positives = 178/221 (80%), Gaps = 1/221 (0%)

Query: 32  SRSFTTTEGHRPTIVHKRSLDILHDPWFNKGTAFSMTEXXXXXXXXXXPPNVMSPEQQIE 91
           SR F+T     P IVHKR  DILHDPWFNK T F +TE          PP V+S E Q +
Sbjct: 14  SRRFSTAI-PGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGLRGLLPPRVISFEHQYD 72

Query: 92  RFMADLKRLEVHARDGPSDPNYLAKWRILNRLHDRNETMYYKVLIANIEEYAPIVYTPTV 151
           RFM   + LE + +  P     LAKWRILNRLHDRNET+YY+VLI NI+++API+YTPTV
Sbjct: 73  RFMESYRSLEKNTQGQPDSVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTV 132

Query: 152 GLVCQNYSGLFRRPRGMYFSAADRGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVQG 211
           GLVCQNYSGLFRRPRGMYFSA D+GEMMSM+YNWPAEQVDMIV+TDGSRILGLGDLGVQG
Sbjct: 133 GLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAEQVDMIVLTDGSRILGLGDLGVQG 192

Query: 212 IGIAIGKLDLYVAAAGINPQRVLPVMIDVGTNNEKLLKNPL 252
           IGI IGKLD+YVAAAGINPQR+LPVM+DVGTNN+KLL++ L
Sbjct: 193 IGIPIGKLDMYVAAAGINPQRILPVMLDVGTNNQKLLEDRL 233


>29794.m003406 malic enzyme, putative
          Length = 588

 Score =  196 bits (497), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 93/198 (46%), Positives = 127/198 (64%), Gaps = 10/198 (5%)

Query: 53  ILHDPWFNKGTAFSMTEXXXXXXXXXXPPNVMSPEQQIERFMADLKRLEVHARDGPSDPN 112
           +L DP  NKG AF+  E          PP ++S E Q +R M +L++ +V          
Sbjct: 52  LLRDPRHNKGLAFNEKERDAHYLRGLLPPAILSQEHQEKRLMHNLRQYQVP--------- 102

Query: 113 YLAKWRILNRLHDRNETMYYKVLIANIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSA 172
            L ++  +  L +RNE ++YK+LI N+EE  P+VYTPTVG  CQ Y  +FRRP+G+Y S 
Sbjct: 103 -LQRYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISL 161

Query: 173 ADRGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVQGIGIAIGKLDLYVAAAGINPQR 232
            ++G+++ ++ NWP   + +IVVTDG RILGLGDLG QG+GI +GKL LY A  GI P  
Sbjct: 162 KEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSA 221

Query: 233 VLPVMIDVGTNNEKLLKN 250
            LPV IDVGTNNE+LL +
Sbjct: 222 CLPVTIDVGTNNEQLLND 239


>30146.m003510 malic enzyme, putative
          Length = 641

 Score =  190 bits (483), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 91/198 (45%), Positives = 126/198 (63%), Gaps = 10/198 (5%)

Query: 53  ILHDPWFNKGTAFSMTEXXXXXXXXXXPPNVMSPEQQIERFMADLKRLEVHARDGPSDPN 112
           +L DP  NKG AF+  E          PP ++S E Q+++ M  +++ ++          
Sbjct: 105 LLRDPHHNKGLAFNDKERDAHYLRGLLPPAIVSQELQVKKMMHIIRQYQLP--------- 155

Query: 113 YLAKWRILNRLHDRNETMYYKVLIANIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSA 172
            L K+  +  L +RNE ++YK+LI N+EE  PIVYTPTVG  CQ Y  +F RP+G+Y S 
Sbjct: 156 -LQKYMAMMDLQERNEKLFYKLLIQNVEEMLPIVYTPTVGEACQKYGSIFGRPQGLYISL 214

Query: 173 ADRGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVQGIGIAIGKLDLYVAAAGINPQR 232
            ++G ++ ++ NWP + + +IVVTDG RILGLGDLG QG+GI +GKL LY A  G+ P  
Sbjct: 215 KEKGRILEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSS 274

Query: 233 VLPVMIDVGTNNEKLLKN 250
            LPV IDVGTNNEKLL +
Sbjct: 275 CLPVTIDVGTNNEKLLND 292


>29912.m005447 malic enzyme, putative
          Length = 591

 Score =  189 bits (479), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 90/198 (45%), Positives = 125/198 (63%), Gaps = 10/198 (5%)

Query: 53  ILHDPWFNKGTAFSMTEXXXXXXXXXXPPNVMSPEQQIERFMADLKRLEVHARDGPSDPN 112
           +L DP  NKG AFS  E          PP V + + Q ++ M  +++ ++          
Sbjct: 55  LLRDPRHNKGLAFSEKERDAHYLRGLLPPVVATQQLQEKKLMHTIRQYQLP--------- 105

Query: 113 YLAKWRILNRLHDRNETMYYKVLIANIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSA 172
            L K+  +  L +RNE ++YK+LI N+EE  PIVYTPTVG  CQ Y  +F+RP+G+Y S 
Sbjct: 106 -LQKYMAMMELEERNERLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIFKRPQGLYISL 164

Query: 173 ADRGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVQGIGIAIGKLDLYVAAAGINPQR 232
            ++G+++ ++ NWP   + +IVVTDG RILGLGDLG QG+GI +GKL LY A  G+ P  
Sbjct: 165 KEKGKILDVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSA 224

Query: 233 VLPVMIDVGTNNEKLLKN 250
            LP+ IDVGTNNEKLL +
Sbjct: 225 CLPITIDVGTNNEKLLND 242