Jatropha Genome Database

JcCA0116061.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0116061.10 - phase: 0 /partial
         (180 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m014132 oxidoreductase, acting on paired donors, with inco...   279   5e-76

>30147.m014132 oxidoreductase, acting on paired donors, with
           incorporation or reduction of molecular oxygen,
           2-oxoglutarate as one donor, and, putative
          Length = 239

 Score =  279 bits (714), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 135/169 (79%), Positives = 149/169 (88%), Gaps = 6/169 (3%)

Query: 9   TKKRKMGERREDGIGGKNSSSKTKWPLIKPKKNLQITRIKDTDLFTVQNFFTPAESKAFI 68
           T+KRK+ +       GKNSSSK+ WPLIKPKKNL+ITR+K+TDLF VQ+F T  ESK+F+
Sbjct: 6   TRKRKVADY------GKNSSSKSNWPLIKPKKNLEITRLKETDLFIVQDFLTCGESKSFV 59

Query: 69  KAAESIGFVHQGSLGPTRGEAYRDNDRVSSNDSALANAVWESGLNKLFSDIKIRGKVAVG 128
           KAAE+ GFVHQGSLGPT+GEAYRDNDR+S NDS LA  VWESGLN LFSDIKIRGKVAVG
Sbjct: 60  KAAEATGFVHQGSLGPTKGEAYRDNDRISVNDSLLAKNVWESGLNNLFSDIKIRGKVAVG 119

Query: 129 LNPNIRFYRYKVGQRFGRHIDESVDLGDGKRTHYTLLIYLSGDSKAKIK 177
           LNPNIRFYRYKVGQRFG+HIDESVDLGDGKRTHYTLLIYLSGDSKAK K
Sbjct: 120 LNPNIRFYRYKVGQRFGQHIDESVDLGDGKRTHYTLLIYLSGDSKAKTK 168