Jatropha Genome Database

JcCA0113151.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0113151.10 + phase: 1 /partial
         (296 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30146.m003510 malic enzyme, putative                                  545   e-155
29912.m005447 malic enzyme, putative                                  512   e-146
29794.m003406 malic enzyme, putative                                  496   e-141
29709.m001210 malic enzyme, putative                                  240   5e-64
30174.m008988 malic enzyme, putative                                  221   3e-58

>30146.m003510 malic enzyme, putative
          Length = 641

 Score =  545 bits (1404), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 261/291 (89%), Positives = 273/291 (93%)

Query: 6   RGRILEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACL 65
           +GRILEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKL+LYTALGGVRPS+CL
Sbjct: 217 KGRILEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCL 276

Query: 66  PVTIDVGTNNEKLLNDEFYIGLRQRRATGQEYSELLHEFMTAVKKNYGERILVQFEDFAN 125
           PVTIDVGTNNEKLLNDEFYIGLRQRRATGQEY+ELLHEFMTAVK+NYGER+LVQFEDFAN
Sbjct: 277 PVTIDVGTNNEKLLNDEFYIGLRQRRATGQEYAELLHEFMTAVKQNYGERVLVQFEDFAN 336

Query: 126 HNAFDLLAKYGTTHLVFNDDIQGTASVVXXXXXXXXXXXXXXXXDHKFLFLGAGEAGTGI 185
           HNAFDLLAKYGTTHLVFNDDIQGTASVV                DH+FLFLGAGEAGTGI
Sbjct: 337 HNAFDLLAKYGTTHLVFNDDIQGTASVVLAGLVAALKLVGGSLADHRFLFLGAGEAGTGI 396

Query: 186 AELIALEMSKENNMPVEETRKKIWLVDSKGLIVSSRMDSLQHFKKPWAHDHEPMKTLLDA 245
           AELIALEMSK+ NMPVEETRKKIWLVDSKGLIVSSRMDSLQHFK+PWAH+HEP+KTLLDA
Sbjct: 397 AELIALEMSKQTNMPVEETRKKIWLVDSKGLIVSSRMDSLQHFKRPWAHEHEPIKTLLDA 456

Query: 246 VNDIKPTVLIGTSGVGRTFTKEVVEAMASFYERPIILALSNPTSQSECTAE 296
           VNDIKPTVLIGTSGVGRTFTKEVVEAMASF E+PIILALSNPTSQSECTAE
Sbjct: 457 VNDIKPTVLIGTSGVGRTFTKEVVEAMASFNEKPIILALSNPTSQSECTAE 507


>29912.m005447 malic enzyme, putative
          Length = 591

 Score =  512 bits (1318), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 243/291 (83%), Positives = 264/291 (90%)

Query: 6   RGRILEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACL 65
           +G+IL+VL+NWPE++IQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACL
Sbjct: 167 KGKILDVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACL 226

Query: 66  PVTIDVGTNNEKLLNDEFYIGLRQRRATGQEYSELLHEFMTAVKKNYGERILVQFEDFAN 125
           P+TIDVGTNNEKLLNDEFYIGLRQRRATGQEYSELL EFMTAVK+NYGE++L+QFEDFAN
Sbjct: 227 PITIDVGTNNEKLLNDEFYIGLRQRRATGQEYSELLQEFMTAVKQNYGEKVLIQFEDFAN 286

Query: 126 HNAFDLLAKYGTTHLVFNDDIQGTASVVXXXXXXXXXXXXXXXXDHKFLFLGAGEAGTGI 185
           HNAF+LLAKYGTTHLVFNDDIQGTASVV                DH FLFLGAGEAGTGI
Sbjct: 287 HNAFELLAKYGTTHLVFNDDIQGTASVVLAGVIAALKLLGGSLSDHTFLFLGAGEAGTGI 346

Query: 186 AELIALEMSKENNMPVEETRKKIWLVDSKGLIVSSRMDSLQHFKKPWAHDHEPMKTLLDA 245
           AELIALEMSK  N P+EETRKKIWLVDSKGLIVSSR DSLQHFK+PWAH+HEP+K LLDA
Sbjct: 347 AELIALEMSKRTNAPLEETRKKIWLVDSKGLIVSSRKDSLQHFKQPWAHEHEPVKNLLDA 406

Query: 246 VNDIKPTVLIGTSGVGRTFTKEVVEAMASFYERPIILALSNPTSQSECTAE 296
           V  IKPTVLIG+SGVGRTFTKEV+EAMAS  E+P+IL+LSNPTSQSECTAE
Sbjct: 407 VKAIKPTVLIGSSGVGRTFTKEVIEAMASLNEKPLILSLSNPTSQSECTAE 457


>29794.m003406 malic enzyme, putative
          Length = 588

 Score =  496 bits (1276), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 236/291 (81%), Positives = 263/291 (90%)

Query: 6   RGRILEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACL 65
           +G+ILEVL+NWPE+NIQVIVVTDGERILGLGDLGCQGMGIPVGKL+LYTALGG+RPSACL
Sbjct: 164 KGKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACL 223

Query: 66  PVTIDVGTNNEKLLNDEFYIGLRQRRATGQEYSELLHEFMTAVKKNYGERILVQFEDFAN 125
           PVTIDVGTNNE+LLNDEFYIGLRQRRATGQEY+ELL EFMTA K+NYGE++LVQFEDFAN
Sbjct: 224 PVTIDVGTNNEQLLNDEFYIGLRQRRATGQEYAELLEEFMTAAKQNYGEKVLVQFEDFAN 283

Query: 126 HNAFDLLAKYGTTHLVFNDDIQGTASVVXXXXXXXXXXXXXXXXDHKFLFLGAGEAGTGI 185
           HNAF+LLAKY ++HLVFNDDIQGTASVV                +HKFLFLGAGEAGTGI
Sbjct: 284 HNAFELLAKYSSSHLVFNDDIQGTASVVLAGLLAALKLVGGTLSNHKFLFLGAGEAGTGI 343

Query: 186 AELIALEMSKENNMPVEETRKKIWLVDSKGLIVSSRMDSLQHFKKPWAHDHEPMKTLLDA 245
           AELIA E+SK+   P+EETRKKIWLVDSKGLIVSSR +SLQHFKKPWAH+HEP+K LLDA
Sbjct: 344 AELIAREISKQTKAPIEETRKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHEPVKGLLDA 403

Query: 246 VNDIKPTVLIGTSGVGRTFTKEVVEAMASFYERPIILALSNPTSQSECTAE 296
           V  +KPTVLIG+SGVG+TFTKEVV+AMASF E+P+ILALSNPTSQSECTAE
Sbjct: 404 VKALKPTVLIGSSGVGKTFTKEVVQAMASFNEKPLILALSNPTSQSECTAE 454


>29709.m001210 malic enzyme, putative
          Length = 626

 Score =  240 bits (613), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 134/306 (43%), Positives = 182/306 (59%), Gaps = 17/306 (5%)

Query: 6   RGRILEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACL 65
           RG ++ ++ NWP + + +IVVTDG RILGLGDLG QG+GI +GKL LY A  G+ P   L
Sbjct: 174 RGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVQGIGIAIGKLDLYVAAAGINPQRVL 233

Query: 66  PVTIDVGTNNEKLLNDEFYIGLRQRRATGQEYSELLHEFMTAVKKNYGERILVQFEDFAN 125
           PV IDVGTNNEKLL D  Y+GL++ R  G EY  ++ EFM AV   +   ++VQFEDF +
Sbjct: 234 PVMIDVGTNNEKLLKDPLYLGLQEHRLDGDEYVAVIDEFMEAVFTRW-PNVIVQFEDFQS 292

Query: 126 HNAFDLLAKYGTTHLVFNDDIQGTASVVXXXXXXXXXXXXXXXXD---HKFLFLGAGEAG 182
             AF LL +Y  T+ +FNDD+QGTA V                 D    K +  GAG AG
Sbjct: 293 KWAFKLLQRYRNTYRMFNDDVQGTAGVAIAGLLGAVRAKGRPMIDFPKQKIVVAGAGSAG 352

Query: 183 TGI---AELIALEMSKENNMPVEETRKKIWLVDSKGLIVSSRMDSLQHFKKPWAH----- 234
            G+   A      M   N    E  R + W+VD+KGLI   R ++L    +P+A      
Sbjct: 353 IGVLNDARKTMARMLGNNASAFESARSQFWVVDAKGLITEER-ENLDSEVQPFARRIKEA 411

Query: 235 DHEPMK---TLLDAVNDIKPTVLIGTSGVGRTFTKEVVEAM-ASFYERPIILALSNPTSQ 290
           + + ++   +L++ V ++KP VL+G S VG  F+KEV+EA+ +S   RP I A+SNPT  
Sbjct: 412 NRQGLREGASLVEVVREVKPDVLLGLSAVGGLFSKEVLEALKSSTSTRPAIFAMSNPTKN 471

Query: 291 SECTAE 296
           +ECTAE
Sbjct: 472 AECTAE 477


>30174.m008988 malic enzyme, putative
          Length = 602

 Score =  221 bits (564), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 124/300 (41%), Positives = 173/300 (57%), Gaps = 12/300 (4%)

Query: 6   RGRILEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACL 65
           +G ++ ++ NWP + + +IV+TDG RILGLGDLG QG+GIP+GKL +Y A  G+ P   L
Sbjct: 156 KGEMMSMIYNWPAEQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDMYVAAAGINPQRIL 215

Query: 66  PVTIDVGTNNEKLLNDEFYIGLRQRRATGQEYSELLHEFMTAVKKNYGERILVQFEDFAN 125
           PV +DVGTNN+KLL D  Y+GLRQ R  G+EY  ++ EFM AV   +  + +VQFEDF  
Sbjct: 216 PVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVFTRW-PKAIVQFEDFQM 274

Query: 126 HNAFDLLAKYGTTHLVFNDDIQGTASVVXXXXXXXXXXXXXXXXD---HKFLFLGAGEAG 182
             AF+ L +Y     +FNDDIQGTA V                 D    K + +GAG AG
Sbjct: 275 KWAFETLQRYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGRPLSDFVKQKIVVVGAGSAG 334

Query: 183 TGIAELIALEMSKENNMPVEETRKKIWLVDSKGLIVSSRMDSLQHFKKPWAHDHEPMK-- 240
            G+  +    +S+ +           +L+D  GLI   R  ++     P+A D + ++  
Sbjct: 335 LGVLNMAIQAVSRMSGNNEASVNNNFFLLDKDGLITKER-KNIDPAAAPFAKDLKDVEGL 393

Query: 241 ----TLLDAVNDIKPTVLIGTSGVGRTFTKEVVEAMA-SFYERPIILALSNPTSQSECTA 295
               TL++ V  +KP VL+G SGVG  F  EV++AM  S   +P I A+SNPT  +ECTA
Sbjct: 394 REGATLVEVVKKLKPHVLLGLSGVGGIFNDEVLKAMRDSDCIKPAIFAMSNPTMNAECTA 453