Jatropha Genome Database

JcCA0111951.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0111951.10 + phase: 0 /partial
         (308 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m014487 conserved hypothetical protein                          459   e-130
29903.m000183 conserved hypothetical protein                          323   8e-89
30170.m014059 conserved hypothetical protein                           55   5e-08
29907.m000629 conserved hypothetical protein                           54   1e-07

>30147.m014487 conserved hypothetical protein
          Length = 545

 Score =  459 bits (1181), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 231/273 (84%), Positives = 243/273 (89%), Gaps = 1/273 (0%)

Query: 20  VLGRKKASENG-GGPDPSRKSFNSSRPGGLTGERTVKRLRLSKALTVPESTSIYDACRRM 78
           +LGRKK+S+NG    D +RKSF SSRPGGLTGERTVKRLRLSKALTVPE+T+I +ACRRM
Sbjct: 20  MLGRKKSSDNGLASSDSARKSFASSRPGGLTGERTVKRLRLSKALTVPETTTIQEACRRM 79

Query: 79  AARRVDALLLTDSNALLCGILTDKDIATRVIAREVNLEETPISKVMTRNPVFVLSDTLAV 138
           AARRVDALLLTDSNALLCGILTDKDIATRVIARE+NLEETP+SKVMTRNPVFVLSDTLAV
Sbjct: 80  AARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPVFVLSDTLAV 139

Query: 139 EALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERXXXXXXXXXXXXXXXXXNW 198
           EALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMER                 NW
Sbjct: 140 EALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKNW 199

Query: 199 GTSFSGPNTFIETLRERMFRPSLSTIVPENSKVVTVSPTETVLAATKKMLEFRTSSAVVI 258
           GT+FSGPNTFIETLRERMFRPSLSTI+PENSKVVTV PTETVLA TKKMLE R+SSAVVI
Sbjct: 200 GTTFSGPNTFIETLRERMFRPSLSTILPENSKVVTVLPTETVLAVTKKMLESRSSSAVVI 259

Query: 259 VDSKPRGILTSKDILMRVIAQNLPPDSTLVEKV 291
           VD KPRGILTSKDILMRVIAQNLP DSTL EKV
Sbjct: 260 VDQKPRGILTSKDILMRVIAQNLPSDSTLAEKV 292



 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 68/118 (57%), Gaps = 4/118 (3%)

Query: 60  SKALTVPESTSIYDACRRM-AARRVDALLLTDSNALLCGILTDKDIATRVIAREVNLEET 118
           SK +TV  + ++    ++M  +R   A+++ D      GILT KDI  RVIA+ +  + T
Sbjct: 230 SKVVTVLPTETVLAVTKKMLESRSSSAVVIVDQKPR--GILTSKDILMRVIAQNLPSDST 287

Query: 119 PISKVMTRNPVFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIA 175
              KVMT NP     DT  V+AL  M  GKF HLPV++ +G V+A++D+    + A+A
Sbjct: 288 LAEKVMTPNPECATIDTPIVDALHTMHDGKFLHLPVLDRDGNVVAVVDVIHITHAAVA 345


>29903.m000183 conserved hypothetical protein
          Length = 546

 Score =  323 bits (827), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 155/246 (63%), Positives = 193/246 (78%)

Query: 50  GERTVKRLRLSKALTVPESTSIYDACRRMAARRVDALLLTDSNALLCGILTDKDIATRVI 109
           GERTVK+LRLSKALT+PE T++ DACRRMAARRVDA+LLTD+NALL GI+TDKDI+ RVI
Sbjct: 57  GERTVKKLRLSKALTIPEGTTVSDACRRMAARRVDAVLLTDANALLSGIVTDKDISARVI 116

Query: 110 AREVNLEETPISKVMTRNPVFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKC 169
           A  +  E+T +SK+MTRNP+FV SD+LA++ALQKMVQGKFRHLPVVENGEVIALLDI KC
Sbjct: 117 AEGLRPEQTIVSKIMTRNPIFVASDSLAIDALQKMVQGKFRHLPVVENGEVIALLDITKC 176

Query: 170 LYDAIARMERXXXXXXXXXXXXXXXXXNWGTSFSGPNTFIETLRERMFRPSLSTIVPENS 229
           LYDAI+RME+                  WG++FS P  FIETLRERMF+PSLSTI+ E +
Sbjct: 177 LYDAISRMEKVAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIIGEQT 236

Query: 230 KVVTVSPTETVLAATKKMLEFRTSSAVVIVDSKPRGILTSKDILMRVIAQNLPPDSTLVE 289
           KV   SP++ V  A K+M + + +S +++  +K +GILTSKDILMRV+A N+ P+ TLVE
Sbjct: 237 KVAIASPSDPVYVAAKRMRDLQVNSVIIVTGNKIQGILTSKDILMRVVAHNISPELTLVE 296

Query: 290 KVYLSS 295
           KV  S+
Sbjct: 297 KVMTSN 302



 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 67/112 (59%), Gaps = 2/112 (1%)

Query: 68  STSIYDACRRMAARRVDALLLTDSNALLCGILTDKDIATRVIAREVNLEETPISKVMTRN 127
           S  +Y A +RM   +V+++++   N +  GILT KDI  RV+A  ++ E T + KVMT N
Sbjct: 244 SDPVYVAAKRMRDLQVNSVIIVTGNKIQ-GILTSKDILMRVVAHNISPELTLVEKVMTSN 302

Query: 128 PVFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARME 178
           P     +T  ++AL  M  GKF HLPVV+ +G   A +D+ +  + AI+ +E
Sbjct: 303 PECATLETTILDALHIMHDGKFLHLPVVDKDGSATACVDVLQITHAAISMVE 354


>30170.m014059 conserved hypothetical protein
          Length = 205

 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 4/100 (4%)

Query: 70  SIYDACRRMAARRVDALL-LTDSNALLCGILTDKDIATRVIAREVNLEETPISKVMTRNP 128
           ++YDA + MA   + +LL L      L GI+T++D   +VIA   +   T ++++MT   
Sbjct: 80  TVYDAVKNMAENNIGSLLVLKPGEKHLAGIITERDYLRKVIAEGRSCHYTRVAEIMTDEN 139

Query: 129 --VFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDI 166
             V V SDT  + A+Q M     RH+PV++ G ++ ++ +
Sbjct: 140 RLVTVTSDTTILRAMQLMTDHHIRHVPVID-GRIVGMISM 178


>29907.m000629 conserved hypothetical protein
          Length = 206

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 57/110 (51%), Gaps = 4/110 (3%)

Query: 70  SIYDACRRMAARRVDALLLT--DSNALLCGILTDKDIATRVIAREVNLEETPISKVMTRN 127
           ++YDA + M    V AL++        + GI+T++D   ++I +  + + T +  +MT  
Sbjct: 80  TVYDAVKSMTHHNVGALVVVKPGEQKSIAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 139

Query: 128 P--VFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIA 175
              + V  DT  + A+Q M   + RH+PV+ + +++ +L I   +   +A
Sbjct: 140 NKLITVTPDTKVLRAMQLMTDNRIRHIPVINDKDMVGMLSIGDVVRAVVA 189