Jatropha Genome Database

JcCA0101681.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0101681.10 + phase: 1 /pseudo/partial
         (262 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29762.m000496 ubiquitin-activating enzyme E1, putative                439   e-124

>29762.m000496 ubiquitin-activating enzyme E1, putative
          Length = 467

 Score =  439 bits (1130), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 209/233 (89%), Positives = 221/233 (94%)

Query: 22  IVEHQEALRTYNALEIFSQYDIIVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLT 81
           IVEHQEALRT NALEIFSQYDIIVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLT
Sbjct: 165 IVEHQEALRTSNALEIFSQYDIIVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLT 224

Query: 82  VYNYKGGPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALEAIKIASDIGEPLSG 141
           VYNYKGGPCYRCLFPTPPP+TACQRCADSGVLGVVPGIIGCLQALEAIKIASDIGEPLSG
Sbjct: 225 VYNYKGGPCYRCLFPTPPPSTACQRCADSGVLGVVPGIIGCLQALEAIKIASDIGEPLSG 284

Query: 142 RMLLLDALSARIRIVKIRSRSLNCEVCGETAAFNQKQFRDFDYEKFTQSPLSTAPPKLNL 201
           RMLL DALSARIRIVKIR RSL CEVCGE +AF QKQFRDFDYEKFTQ+PLS AP KL+L
Sbjct: 285 RMLLFDALSARIRIVKIRGRSLQCEVCGENSAFTQKQFRDFDYEKFTQTPLSMAPLKLDL 344

Query: 202 LSAGSRITSKDFNEKIVKGEGHVLLDVRPAHHFKIVALPNALNIPLASLEAKV 254
           L A SRI S++FNEK++KGE HVL+DVRPAHHFKIVALPNALNIPL+SLEA++
Sbjct: 345 LPADSRINSREFNEKVIKGETHVLVDVRPAHHFKIVALPNALNIPLSSLEARL 397