Jatropha Genome Database

JcCA0098341.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0098341.10 + phase: 1 /pseudo/partial
         (121 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29698.m000067 bacteriochlorophyll synthase, putative                  186   2e-48

>29698.m000067 bacteriochlorophyll synthase, putative
          Length = 432

 Score =  186 bits (473), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 88/99 (88%), Positives = 93/99 (93%)

Query: 23  KDIPDIEGDKIFGIQSFTVRLGQERVFWICISLLEIAYGVAILVGAASSYTWSKCVTVVG 82
           KDIPDIEGDKIFGI+SFTVRLGQERVFWICISLLEIAYGVAILVGAASSYTWSKC+TV+G
Sbjct: 309 KDIPDIEGDKIFGIRSFTVRLGQERVFWICISLLEIAYGVAILVGAASSYTWSKCITVLG 368

Query: 83  HAILAAILWNRAKSVDLKSKAAITSCYMFIWKVSQSLTD 121
           H ILA +LWNRAKSVDLKSKAAITSCYMFIWKV  S  +
Sbjct: 369 HVILALMLWNRAKSVDLKSKAAITSCYMFIWKVMHSYAN 407