Jatropha Genome Database

JcCA0098081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0098081.10 - phase: 0 /partial
         (129 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30026.m001510 trehalose-6-phosphate synthase, putative                194   7e-51
29607.m000232 trehalose-6-phosphate synthase, putative                 80   4e-16

>30026.m001510 trehalose-6-phosphate synthase, putative
          Length = 915

 Score =  194 bits (494), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 94/128 (73%), Positives = 108/128 (84%)

Query: 2   MLRDEDIYTFFEPELPNEPPAKARCRSLDPVTSHLPKVPCSRSRSKAHLNKQRSMSTLER 61
           + +DEDIYTFFEPELP E PA AR RS D + S LPK+PC +SRSKAHL KQRS+STLE+
Sbjct: 788 LAKDEDIYTFFEPELPIESPAVARSRSPDHLVSPLPKIPCGKSRSKAHLKKQRSLSTLEK 847

Query: 62  NKVGTPAWRPIQHDRIKMHEGSSVLDLKAENYFSCAVSRKRSNARYLLGTSDDVVILLKE 121
           + +G+ AWRPI  +RI +HEGSSVLDLK ENYFSCAVSRKRSNARYLLGTS+DVV LLKE
Sbjct: 848 SSIGSAAWRPIVRERISVHEGSSVLDLKGENYFSCAVSRKRSNARYLLGTSEDVVTLLKE 907

Query: 122 LADSLTFS 129
           LADS + S
Sbjct: 908 LADSSSLS 915


>29607.m000232 trehalose-6-phosphate synthase, putative
          Length = 927

 Score = 79.7 bits (195), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 69/137 (50%), Gaps = 31/137 (22%)

Query: 4   RDEDIYTFFEPELPNEPPAKARCRSLDPVTS----HLPKVPCSRSRSKAHL--------- 50
           +DED+YTFFEPELP++     R +  D + S       K+P SR+ SK            
Sbjct: 798 KDEDVYTFFEPELPSDGIGITRTKQTDGLKSPGERRPSKLPASRTGSKPSQGKTSRPSPN 857

Query: 51  ----NKQRSMSTLERNKVGTPAWRPIQHDRIKMHEGSSVLDLKAENYFSCAVSRKRSNAR 106
               N   S  ++ R      +W              +VLDLK +NYFSCAV R R++AR
Sbjct: 858 SDKRNNNHSCGSVRRQSPEKISW--------------NVLDLKGDNYFSCAVGRTRTSAR 903

Query: 107 YLLGTSDDVVILLKELA 123
           YLL + DDVV  L++LA
Sbjct: 904 YLLQSPDDVVSFLRKLA 920