Jatropha Genome Database
- JcCA0091211.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0091211.10 - phase: 0 /pseudo/partial
(243 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30128.m008586 DNA replication licensing factor MCM2, putative 290 4e-79
29693.m002033 DNA replication licensing factor MCM3, putative 96 1e-20
30076.m004661 DNA replication licensing factor MCM7, putative 76 1e-14
29737.m001249 DNA replication licensing factor MCM5, putative 73 2e-13
29806.m000936 Minichromosome maintenance protein MCM, putative 71 6e-13
29805.m001487 DNA replication licensing factor MCM8, putative 62 3e-10
>30128.m008586 DNA replication licensing factor MCM2, putative
Length = 930
Score = 290 bits (742), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 143/157 (91%), Positives = 146/157 (92%), Gaps = 7/157 (4%)
Query: 80 RNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIYTNNFDLSLNTKN 139
RNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIYTNNFDLSLNTKN
Sbjct: 391 RNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIYTNNFDLSLNTKN 450
Query: 140 GFPVFATVIEANHVTKKQDLFSAYKLTQEDKEEIEKLAKDPRIGERIIKSIAPSIYGHED 199
GFPVFATVIEANHVTKKQDLFSAYKLTQEDKEEIEKLAKDPRIGERIIKSIAPSIYGHED
Sbjct: 451 GFPVFATVIEANHVTKKQDLFSAYKLTQEDKEEIEKLAKDPRIGERIIKSIAPSIYGHED 510
Query: 200 IKTAIALAMFGGQEKNVRRXDTGSE---GTVNVLLMG 233
IKTA+ALAMFGGQEKNV G G +NVLL+G
Sbjct: 511 IKTALALAMFGGQEKNVE----GKHRLRGDINVLLLG 543
>29693.m002033 DNA replication licensing factor MCM3, putative
Length = 769
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 92/154 (59%), Gaps = 3/154 (1%)
Query: 80 RNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIYTNNFDLSLNTKN 139
+++Q L++QE P G+LPR ++I+ +DL+D +PG+ + + GIY S + N
Sbjct: 184 KDHQTLSMQEVPENSAPGQLPRTVDIIVEDDLVDSCKPGDRVAIVGIYKALPGRSKGSVN 243
Query: 140 GFPVFATVIEANHVTKKQDLFSAYKLTQEDKEEIEKLAKDPRIGERIIKSIAPSIYGHED 199
G VF TV+ AN+V+ +A + ED + I+K+A+ + + S+APSIYGH
Sbjct: 244 G--VFRTVVIANNVSLLNKEANAPIYSPEDLKNIKKIAERDDAFDLLGNSLAPSIYGHSW 301
Query: 200 IKTAIALAMFGGQEKNVRRXDTGSEGTVNVLLMG 233
IK A+ L M GG EKN++ T G +N++++G
Sbjct: 302 IKKAVILLMLGGVEKNLKN-GTHLRGDINMMMVG 334
>30076.m004661 DNA replication licensing factor MCM7, putative
Length = 718
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 1/152 (0%)
Query: 82 YQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIYTNNFDLSLNTKNGF 141
+Q+ +QE VP G +PR V +L PG+ +E++GI+
Sbjct: 226 FQEAKIQELAEHVPKGHIPRSMSVHFRGELTRKVVPGDVVEISGIFLPIPYTGFRALRAG 285
Query: 142 PVFATVIEANHVTKKQDLFSAYKLTQEDKEEIEKLAKDPRIGERIIKSIAPSIYGHEDIK 201
V T +EA VT + + Y+L +++E+I +LA+D I ++ +S+AP IYGHEDIK
Sbjct: 286 LVADTYLEAMSVTHFKKKYEEYELRGDEEEQIARLAEDGDIYNKLAQSLAPEIYGHEDIK 345
Query: 202 TAIALAMFGGQEKNVRRXDTGSEGTVNVLLMG 233
A+ L + G + ++ G +++ LMG
Sbjct: 346 KALLLLLVGAPHRKLKD-GMKIRGDLHLCLMG 376
>29737.m001249 DNA replication licensing factor MCM5, putative
Length = 723
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 5/157 (3%)
Query: 81 NYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIYT--NNFDLSLNTK 138
+ Q L LQE+P VP G LPR + + L+ PG + + GIY+ + S + +
Sbjct: 220 DQQTLKLQENPEDVPTGELPRNMLLSVDRHLVQRIVPGTRLTIIGIYSIFQAANSSTSHR 279
Query: 139 NGFPVFATVIEANHVTKKQDLFSA--YKLTQEDKEEIEKLAKDPRIGERIIKSIAPSIYG 196
V I + + + S TQE+ EE ++ A + E I IAPSI+G
Sbjct: 280 GAVAVRQPYIRVVGIEEINEANSQGHTAFTQEETEEFKRFASRTDVYESICSKIAPSIFG 339
Query: 197 HEDIKTAIALAMFGGQEKNVRRXDTGSEGTVNVLLMG 233
E +K A+A +FGG KN+ G +NVLL+G
Sbjct: 340 EEQVKKAVACLLFGGARKNLPD-GVKLRGDINVLLLG 375
>29806.m000936 Minichromosome maintenance protein MCM, putative
Length = 644
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 85/158 (53%), Gaps = 8/158 (5%)
Query: 81 NYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIYTNNFDLSLNTKNG 140
+YQ++ +QES ++ G +PR VIL +DL+D + G+++ VTGI T + S + K+
Sbjct: 204 DYQEIKIQESTQVLGVGVIPRSIPVILTDDLVDIVKAGDDVIVTGILTAKW--SPDLKDV 261
Query: 141 FPVFATVIEANHVTKKQDLFSAYKLTQEDKEEIEKLAKD----PRIGER-IIKSIAPSIY 195
V+ ANHV + +L S + ++ + E+ D P G I++ I P ++
Sbjct: 262 RCNLDPVLVANHVRRSNELKSDIDIPRDVIMKFEQFWSDLKDTPLKGRNTILQGICPQVF 321
Query: 196 GHEDIKTAIALAMFGGQEKNVRRXDTGSEGTVNVLLMG 233
G +K A+AL + GG + +V T G ++LL+G
Sbjct: 322 GLFTVKLAVALTLIGGVQ-HVDASGTKIRGESHLLLVG 358
>29805.m001487 DNA replication licensing factor MCM8, putative
Length = 757
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 28/181 (15%)
Query: 81 NYQKLTLQE--SPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIY--TNNF-DLSL 135
++QK+ +QE GR+PR E L DL+D PG+ + VTGI NN+ D+
Sbjct: 221 DFQKIRIQELLRSEDHEEGRVPRTVECELTEDLVDACIPGDVVTVTGIIRTINNYVDIGG 280
Query: 136 NTKNG-----FPVFATVI---------------EANHVTKKQDLFSAYKLTQEDKEEIEK 175
G + ++ VI +A + +L + + +D E I K
Sbjct: 281 GKSKGKNQGFYYLYLEVISIKNSKSQSTSSDMQDARSNARATELSDLFSFSPKDLEFIVK 340
Query: 176 LAKD--PRIGERIIKSIAPSIYGHEDIKTAIALAMFGGQEK-NVRRXDTGSEGTVNVLLM 232
+++ + ++++SI PSIYGHE +K I LA+FGG K ++ + G ++V+++
Sbjct: 341 FSEEYGSDVLRQLVQSICPSIYGHELVKAGITLALFGGVRKHSMDQNKVPVRGDIHVIIV 400
Query: 233 G 233
G
Sbjct: 401 G 401