Jatropha Genome Database

JcCA0088501.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0088501.10 + phase: 2 /partial
         (96 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29827.m002661 9-cis-epoxycarotenoid dioxygenase, putative             171   5e-44
29693.m001992 9-cis-epoxycarotenoid dioxygenase, putative              88   9e-19
30202.m000262 9-cis-epoxycarotenoid dioxygenase, putative              84   2e-17
29864.m001501 9-cis-epoxycarotenoid dioxygenase, putative              78   9e-16
29904.m002987 9-cis-epoxycarotenoid dioxygenase, putative              70   1e-13
29794.m003375 9-cis-epoxycarotenoid dioxygenase, putative              63   3e-11
29794.m003376 9-cis-epoxycarotenoid dioxygenase, putative              56   3e-09

>29827.m002661 9-cis-epoxycarotenoid dioxygenase, putative
          Length = 618

 Score =  171 bits (434), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 78/95 (82%), Positives = 91/95 (95%)

Query: 1   KGDRRECTVAARIYGERCYGGEPFFVARQPENPEAEEDDGYLVSYVHDEINGESKFLVMD 60
           KGDR+ECTVA+R++G +CYGGEPFFVAR+P+N +AEEDDG++VSYVHDEI GESKFLVMD
Sbjct: 524 KGDRQECTVASRMFGPKCYGGEPFFVAREPDNIDAEEDDGFVVSYVHDEIAGESKFLVMD 583

Query: 61  AKSPNLDIVAAVKLPRRVPYGFHGLFVXESDLKKL 95
           A+SPNLDIVAAV+LPRRVPYGFHGLFV E+DLKKL
Sbjct: 584 ARSPNLDIVAAVRLPRRVPYGFHGLFVRENDLKKL 618


>29693.m001992 9-cis-epoxycarotenoid dioxygenase, putative
          Length = 607

 Score = 87.8 bits (216), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 42/84 (50%), Positives = 59/84 (70%), Gaps = 4/84 (4%)

Query: 9   VAARIYGERCYGGEPFFVARQPENPEAEEDDGYLVSYVHDEINGESKFLVMDAKSPNLDI 68
           V   IYG++ +GGEPFF+ R P +   EEDDGY++++VHDE   +S+  +++A   NL +
Sbjct: 524 VKKYIYGDKKFGGEPFFLPRDPNS--EEEDDGYVLAFVHDEKKCKSELQIVNAT--NLQL 579

Query: 69  VAAVKLPRRVPYGFHGLFVXESDL 92
            A+VKLP RVPYGFHG F+   DL
Sbjct: 580 EASVKLPSRVPYGFHGTFIDSEDL 603


>30202.m000262 9-cis-epoxycarotenoid dioxygenase, putative
          Length = 603

 Score = 83.6 bits (205), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/94 (45%), Positives = 59/94 (62%), Gaps = 5/94 (5%)

Query: 1   KGDRRECTVAARIYGERCYGGEPFFVARQPENPEAEEDDGYLVSYVHDEINGESKFLVMD 60
           K D     V   +YG+  YGGEP F+   P +  A+ED GY++ +VHDE   +S+  +++
Sbjct: 513 KVDLNTGEVHKYVYGDSKYGGEPMFL---PSSDSAQEDSGYILCFVHDEKEWKSELQIVN 569

Query: 61  AKSPNLDIVAAVKLPRRVPYGFHGLFVXESDLKK 94
           A   NL + A VKLP RVPYGFHG F+  SDL+K
Sbjct: 570 AM--NLKLEATVKLPSRVPYGFHGTFINASDLQK 601


>29864.m001501 9-cis-epoxycarotenoid dioxygenase, putative
          Length = 536

 Score = 77.8 bits (190), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 6/97 (6%)

Query: 3   DRRECTVAARI-----YGERCYGGEPFFVARQPENPEAEEDDGYLVSYVHDEINGESKFL 57
           D+++  V   +      G   +G E  FV R+P    +EEDDGYL+ +V+DE  G+S   
Sbjct: 437 DKKKLEVGGNVKGIFDLGPGRFGSEAVFVPREP-GTSSEEDDGYLILFVYDENTGKSSVN 495

Query: 58  VMDAKSPNLDIVAAVKLPRRVPYGFHGLFVXESDLKK 94
           V+DAK+ + D VA ++LP RVPYGFH  FV E  L++
Sbjct: 496 VIDAKTMSADPVAVIELPHRVPYGFHAFFVTEEQLQE 532


>29904.m002987 9-cis-epoxycarotenoid dioxygenase, putative
          Length = 618

 Score = 70.5 bits (171), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 60/109 (55%), Gaps = 18/109 (16%)

Query: 1   KGDRRECTVAARIYGERCYGGEPFFVARQPENPEA----------------EEDDGYLVS 44
           K D     V   +YG+  YGGEPFFVA+  E  E                 EE +GY++ 
Sbjct: 507 KVDLETKEVTKFMYGKGRYGGEPFFVAKNREGEEEEDDDDDGKKIGNVINDEEGEGYIMG 566

Query: 45  YVHDEINGESKFLVMDAKSPNLDIVAAVKLPRRVPYGFHGLFVXESDLK 93
           +V DEI   S+ ++++A    ++ VA+V LP RVPYGFHG FV E +LK
Sbjct: 567 FVRDEIKERSELVIVNATG--MEQVASVSLPTRVPYGFHGTFVSEDELK 613


>29794.m003375 9-cis-epoxycarotenoid dioxygenase, putative
          Length = 577

 Score = 62.8 bits (151), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 2/63 (3%)

Query: 25  FVARQPENPEAEEDDGYLVSYVHDEINGESKFLVMDAKSPNLDIVAAVKLPRRVPYGFHG 84
           FV +    PE  EDDG+++++VH+E    SK  ++DAK    + VA   LP RVPYGFHG
Sbjct: 509 FVPKTASTPE--EDDGWIITFVHNEDTNVSKAYIIDAKKFTAEPVAKFTLPSRVPYGFHG 566

Query: 85  LFV 87
           +F+
Sbjct: 567 VFL 569


>29794.m003376 9-cis-epoxycarotenoid dioxygenase, putative
          Length = 469

 Score = 56.2 bits (134), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/51 (49%), Positives = 37/51 (72%)

Query: 37  EDDGYLVSYVHDEINGESKFLVMDAKSPNLDIVAAVKLPRRVPYGFHGLFV 87
           EDDG++V++VH+E    S+  ++DAK+ +   VA + LP RVPYGFHG F+
Sbjct: 413 EDDGWIVTFVHNEDTELSEVCIIDAKNFSDKPVAKITLPCRVPYGFHGAFM 463