Jatropha Genome Database

JcCA0081161.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0081161.20 - phase: 0 
         (367 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29841.m002921 homoserine kinase, putative                             602   e-173
29841.m002917 hypothetical protein                                    120   1e-27

>29841.m002921 homoserine kinase, putative
          Length = 367

 Score =  602 bits (1552), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 296/366 (80%), Positives = 327/366 (89%), Gaps = 1/366 (0%)

Query: 3   AICFLSPVKPITFSSSVH-SKRSPLFRCNFSLPTITTTEPEPVYTSVRSFAPATVANLGP 61
           AICF SP+KPI+ S S H +K  PL RCNFSLPTITTTEPEPV+TSV+SFAPATVANLGP
Sbjct: 2   AICFYSPLKPISLSPSTHFTKPQPLLRCNFSLPTITTTEPEPVFTSVKSFAPATVANLGP 61

Query: 62  GFDFLGCAVDGLGDFVSVRIDPSVHPGEISISDITGNHACKKLSKDPLRNCAGISAIATM 121
           GFDFLGCAVDGLGDFV+V +DPSVHPGEISI++I+G HA KKLSK+PL NCAGI+ IATM
Sbjct: 62  GFDFLGCAVDGLGDFVTVTVDPSVHPGEISIAEISGTHASKKLSKNPLWNCAGIAGIATM 121

Query: 122 KMLNIRSVGLSLTLEKGLPXXXXXXXXXXXXXXXXXXXNEIFGGKLEVKDLILAGLESEA 181
           KMLN+RSVGLSLTLEKGLP                   NEIFGGKL+VK+L+LAGLESEA
Sbjct: 122 KMLNVRSVGLSLTLEKGLPLGSGLGSSAASAAAAAVAVNEIFGGKLDVKELVLAGLESEA 181

Query: 182 KVSGYHADNIAPAIMGGFVLINSYDPLELMSLKFPGEKELFFVLVTPEFEAPTKKMRAAL 241
           KVSGYHADNIAPAIMGGFVLI +Y+PLELM LKFP EK+LFFVLV+P+FEAPTKKMRAAL
Sbjct: 182 KVSGYHADNIAPAIMGGFVLIKNYEPLELMRLKFPVEKDLFFVLVSPDFEAPTKKMRAAL 241

Query: 242 PEEIGMPHHVWNCSQAGALVASVLQGDLMGLGKALSNDKIVEPKRAPLIPGMEEVKKAAI 301
           P EIGMPHHVWNCSQAGALVASVLQGDL+GLGKALS+DKIVEPKRAPLIPGMEEVKKAAI
Sbjct: 242 PAEIGMPHHVWNCSQAGALVASVLQGDLVGLGKALSSDKIVEPKRAPLIPGMEEVKKAAI 301

Query: 302 RAGAFGCTISGAGPTAVAVIDNEERGKEIGERMVEAFLKEGNLKAVSLVKRLDRVGARLI 361
            AGAFGCTISGAGPTAVAVID+EERG EIGE+MV+AFLKEGNLKAV++VKRLDR+GARL+
Sbjct: 302 AAGAFGCTISGAGPTAVAVIDDEERGTEIGEKMVDAFLKEGNLKAVAMVKRLDRIGARLV 361

Query: 362 GSVPAR 367
           G+VP R
Sbjct: 362 GNVPNR 367


>29841.m002917 hypothetical protein
          Length = 76

 Score =  120 bits (300), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 58/76 (76%), Positives = 66/76 (86%)

Query: 247 MPHHVWNCSQAGALVASVLQGDLMGLGKALSNDKIVEPKRAPLIPGMEEVKKAAIRAGAF 306
           M H+  NCSQAGALVA VLQGDL+GLGK LSNDK+VEPKRA L+PGMEEVKK+AI  GAF
Sbjct: 1   MRHYFRNCSQAGALVAFVLQGDLVGLGKTLSNDKVVEPKRARLVPGMEEVKKSAIAPGAF 60

Query: 307 GCTISGAGPTAVAVID 322
           G T+SGAGPT VAV++
Sbjct: 61  GYTVSGAGPTTVAVVN 76