Jatropha Genome Database

JcCA0080851.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0080851.10 - phase: 0 
         (91 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29596.m000699 mads box protein, putative                               88   7e-19
30174.m008934 mads box protein, putative                               87   2e-18
29804.m001536 mads box protein, putative                               86   3e-18
29648.m001978 mads box protein, putative                               85   6e-18
29908.m005982 mads box protein, putative                               85   8e-18
30147.m014133 mads box protein, putative                               84   2e-17
30138.m003939 mads box protein, putative                               80   1e-16
29907.m000663 mads box protein, putative                               80   3e-16
29693.m002039 mads box protein, putative                               79   4e-16
30221.m002218 mads box protein, putative                               78   8e-16
30170.m013776 mads box protein, putative                               78   1e-15
29838.m001690 mads box protein, putative                               76   3e-15
29782.m000119 Floral homeotic protein DEFICIENS, putative              76   3e-15
30138.m004061 mads box protein, putative                               71   1e-13
29693.m002042 mads box protein, putative                               68   8e-13
28830.m000229 mads box protein, putative                               68   1e-12
30099.m001672 mads box protein, putative                               68   1e-12
27866.m000233 mads box protein, putative                               65   6e-12
29613.m000367 mads box protein, putative                               65   6e-12
29838.m001672 mads box protein, putative                               65   9e-12
28348.m000077 mads box protein, putative                               64   1e-11
29813.m001508 mads box protein, putative                               63   3e-11
29693.m002041 mads box protein, putative                               62   5e-11
30099.m001671 mads box protein, putative                               61   1e-10
29739.m003627 mads box protein, putative                               60   3e-10
29912.m005524 mads box protein, putative                               55   1e-08
27893.m000228 mads box protein, putative                               54   1e-08
30190.m010925 conserved hypothetical protein                           51   1e-07
28180.m000391 mads box protein, putative                               50   2e-07
29838.m001673 mads box protein, putative                               47   2e-06
29653.m000299 mads box protein, putative                               45   8e-06

>29596.m000699 mads box protein, putative
          Length = 262

 Score = 88.2 bits (217), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 38/60 (63%), Positives = 52/60 (86%)

Query: 1  MGRRKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSS 60
          MGR K+ ++RI++ +SR VTFSKRRNGL+KKA+EL ILCD E+GV++FS+ G+LY+F SS
Sbjct: 1  MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVVIFSSTGKLYDFSSS 60


>30174.m008934 mads box protein, putative
          Length = 244

 Score = 86.7 bits (213), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 38/61 (62%), Positives = 52/61 (85%)

Query: 1  MGRRKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSS 60
          MGR +VE+KRIE++ +R VTFSKRRNGL+KKA EL +LCD E+ +I+FS+ G+LYEF ++
Sbjct: 1  MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGNA 60

Query: 61 G 61
          G
Sbjct: 61 G 61


>29804.m001536 mads box protein, putative
          Length = 266

 Score = 85.9 bits (211), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 37/61 (60%), Positives = 51/61 (83%)

Query: 1  MGRRKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSS 60
          MGR K+ ++RI++ +SR VTFSKRRNGL+KKAREL ILCD E+GVI+FS+  +LY++ S+
Sbjct: 28 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKARELSILCDAEVGVIIFSSTSKLYDYAST 87

Query: 61 G 61
           
Sbjct: 88 S 88


>29648.m001978 mads box protein, putative
          Length = 234

 Score = 85.1 bits (209), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 33/61 (54%), Positives = 52/61 (85%)

Query: 1  MGRRKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSS 60
          MGR ++E+KRIE+ S+R VT+SKRRNG+IKKA+E+ +LCD E+ +I+F++ G+++E+CS 
Sbjct: 1  MGRGRIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAEVSLIIFASSGKMHEYCSP 60

Query: 61 G 61
           
Sbjct: 61 S 61


>29908.m005982 mads box protein, putative
          Length = 347

 Score = 84.7 bits (208), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 2/62 (3%)

Query: 1  MGRRKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSS 60
          MGR K+E+KRIE+ ++R VTFSKRRNGLIKKA EL ILCD++I +I+FS  GRL  F  S
Sbjct: 1  MGRVKLEIKRIENTTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSPSGRLSHF--S 58

Query: 61 GR 62
          GR
Sbjct: 59 GR 60


>30147.m014133 mads box protein, putative
          Length = 213

 Score = 83.6 bits (205), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 38/60 (63%), Positives = 48/60 (80%)

Query: 1  MGRRKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSS 60
          M R K++M+RIE+ +SR VTFSKRRNGL+KKA EL +LCD E+ VI+FS  GRL EF S+
Sbjct: 1  MVRGKIQMRRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLSEFASN 60


>30138.m003939 mads box protein, putative
          Length = 244

 Score = 80.5 bits (197), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 34/61 (55%), Positives = 49/61 (80%)

Query: 1  MGRRKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSS 60
          MGR +V++KRIE++ +R VTFSKRR GL+KKA E+ +LCD E+ +IVFST G+L+E+ + 
Sbjct: 1  MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60

Query: 61 G 61
           
Sbjct: 61 S 61


>29907.m000663 mads box protein, putative
          Length = 205

 Score = 79.7 bits (195), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 35/61 (57%), Positives = 46/61 (75%)

Query: 1  MGRRKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSS 60
          M R KV+MKRIE+   R VTF KRR+GL+KKA+EL +LCD EIG+ +FS  G+LY+  + 
Sbjct: 1  MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGLFIFSAHGKLYDLATK 60

Query: 61 G 61
          G
Sbjct: 61 G 61


>29693.m002039 mads box protein, putative
          Length = 172

 Score = 79.3 bits (194), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 35/57 (61%), Positives = 43/57 (75%)

Query: 1  MGRRKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEF 57
          MGRRK+EMK ++D SSR VTFSKRR GL KKA EL  LC  +I ++VFS GG+ + F
Sbjct: 1  MGRRKIEMKMVKDTSSRQVTFSKRRTGLFKKANELATLCAAQIAIVVFSPGGKPFSF 57


>30221.m002218 mads box protein, putative
          Length = 233

 Score = 78.2 bits (191), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 32/59 (54%), Positives = 49/59 (83%)

Query: 1  MGRRKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCS 59
          MGR K+ +KRIE++++R VTFSKRR GL+KK  EL +LCD +IG+I+FS+ G++ ++C+
Sbjct: 1  MGRGKIPIKRIENQTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKMCQYCT 59


>30170.m013776 mads box protein, putative
          Length = 230

 Score = 77.8 bits (190), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/57 (63%), Positives = 47/57 (82%)

Query: 1  MGRRKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEF 57
          MGR K+++KRIE+ ++R VTFSKRRNGLIKKA EL +LCDV++ +I+FS  GRL  F
Sbjct: 1  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDVDVALIMFSPSGRLSLF 57


>29838.m001690 mads box protein, putative
          Length = 61

 Score = 76.3 bits (186), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 47/60 (78%)

Query: 1  MGRRKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSS 60
          M R+K+++K+I++ ++R VTFSKRR GL KKA EL  LCD EI ++VFS  G+L+E+ SS
Sbjct: 1  MTRQKIQIKKIDNITARQVTFSKRRRGLFKKAYELSTLCDAEIALLVFSATGKLFEYASS 60


>29782.m000119 Floral homeotic protein DEFICIENS, putative
          Length = 235

 Score = 75.9 bits (185), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 34/62 (54%), Positives = 49/62 (79%), Gaps = 1/62 (1%)

Query: 1  MGRRKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGR-LYEFCS 59
          MGR K+E+K+IE+ ++R VT+SKRRNG+ KKA+EL +LCD ++ +I+FS  GR  +EF S
Sbjct: 1  MGRGKIEIKKIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNSGRKFHEFIS 60

Query: 60 SG 61
           G
Sbjct: 61 PG 62


>30138.m004061 mads box protein, putative
          Length = 363

 Score = 70.9 bits (172), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/53 (56%), Positives = 44/53 (83%)

Query: 1  MGRRKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGR 53
          MGR K+++KR+E  S+R VT+SKRRNG++KKA+EL ILCD+ I +++FS  G+
Sbjct: 1  MGRVKLKIKRLESTSNRQVTYSKRRNGILKKAKELSILCDIHIVLLMFSPTGK 53


>29693.m002042 mads box protein, putative
          Length = 220

 Score = 68.2 bits (165), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 41/56 (73%)

Query: 2  GRRKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEF 57
          GR+K+ MKRIE+   R +TFSKRR+G+ KKA EL  LC  E+G++VFS  G+ + F
Sbjct: 9  GRQKITMKRIENEEDRLITFSKRRSGIYKKASELITLCGAEVGILVFSPAGKPFSF 64


>28830.m000229 mads box protein, putative
          Length = 197

 Score = 67.8 bits (164), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 30/57 (52%), Positives = 40/57 (70%)

Query: 1  MGRRKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEF 57
          MGR+K +M  I+  S+R V+FSKRR G+ KKA EL  LC VE  V++FS GG+ + F
Sbjct: 1  MGRKKTQMSLIQGESARQVSFSKRRTGIFKKASELCTLCAVEAAVVIFSPGGKAFTF 57


>30099.m001672 mads box protein, putative
          Length = 217

 Score = 67.8 bits (164), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 42/60 (70%)

Query: 2  GRRKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSSG 61
          GR+K++M ++ + S+  VTFSKRR+GL KKA EL  LC  EI +IVFS G +++ F   G
Sbjct: 7  GRQKIDMVKMPNESNLQVTFSKRRSGLFKKASELSTLCGAEIAIIVFSPGKKVFSFGHPG 66


>27866.m000233 mads box protein, putative
          Length = 217

 Score = 65.1 bits (157), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 41/56 (73%)

Query: 2  GRRKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEF 57
          GR+K+E+K IE +S+  VTFSKRR GL KKA EL +LC  ++ V+ FS G +++ F
Sbjct: 13 GRQKIEIKPIEGKSNLQVTFSKRRAGLFKKASELSLLCGAQVAVLAFSPGKKVFAF 68


>29613.m000367 mads box protein, putative
          Length = 183

 Score = 65.1 bits (157), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/57 (52%), Positives = 40/57 (70%)

Query: 1  MGRRKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEF 57
          +GR+K+ +++I  +S   VTFSKRR GL KKA EL  LC VEI +IVFS  G+ + F
Sbjct: 6  LGRQKIAIEKISKKSHLQVTFSKRRAGLFKKASELCTLCGVEIAIIVFSPAGKAFSF 62


>29838.m001672 mads box protein, putative
          Length = 207

 Score = 64.7 bits (156), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 39/56 (69%)

Query: 2  GRRKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEF 57
          GR+++EM +I   S+R VTFSKRR G+ KKA EL  LC  EI +IVFS G R + F
Sbjct: 8  GRQRIEMVKISKESNRLVTFSKRRYGVFKKASELSTLCGAEISIIVFSPGKRAFSF 63


>28348.m000077 mads box protein, putative
          Length = 215

 Score = 63.9 bits (154), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 43/54 (79%)

Query: 2  GRRKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLY 55
          GR+K+E+K++E+ + R+VTFSKR++G+ KKA EL  LC  EI V++FS  G+++
Sbjct: 17 GRQKIEIKKLENVNRRYVTFSKRKHGIFKKATELSTLCGAEIAVVLFSGHGKVF 70


>29813.m001508 mads box protein, putative
          Length = 360

 Score = 62.8 bits (151), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/53 (47%), Positives = 43/53 (81%)

Query: 1  MGRRKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGR 53
          MGR K+++K++E+ + R  T+ KR++G+IKKA+EL ILCD++I +++FS  G+
Sbjct: 1  MGRVKLKIKKLENTNGRQATYGKRKHGIIKKAKELSILCDIDIILLMFSPTGK 53


>29693.m002041 mads box protein, putative
          Length = 239

 Score = 62.4 bits (150), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 39/57 (68%)

Query: 2  GRRKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFC 58
          GR+K+EMK+IE+   R +TFSKRR+G+ KKA EL  L   E+  +V+S  G+ + F 
Sbjct: 12 GRQKIEMKKIENEDDRLITFSKRRSGIYKKASELVTLTGAELAFLVYSPAGKPFSFA 68


>30099.m001671 mads box protein, putative
          Length = 226

 Score = 61.2 bits (147), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 39/57 (68%)

Query: 1  MGRRKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEF 57
          +GR+K+ +++I  ++   VTFSKRR GL KKA EL  LC VEI ++VFS   + + F
Sbjct: 26 LGRQKIAIEKISKKTHLQVTFSKRRAGLFKKASELCTLCGVEIAILVFSPANKAFSF 82


>29739.m003627 mads box protein, putative
          Length = 62

 Score = 59.7 bits (143), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 41/53 (77%)

Query: 1  MGRRKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGR 53
          MGRRK+++ R+E   +R V +SKR+ G++KK +EL  LCDV++G+I+FS  G+
Sbjct: 1  MGRRKLKILRLESVKARQVKYSKRKLGVLKKGKELATLCDVDLGLIMFSPSGK 53


>29912.m005524 mads box protein, putative
          Length = 338

 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/49 (48%), Positives = 34/49 (69%)

Query: 1  MGRRKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFS 49
          MGR K+ M+ I +  SR +T+ KR+ GL KK +E  ILCDV+  +I+FS
Sbjct: 1  MGRGKLNMELISNEKSRMITYHKRKKGLTKKVQEFHILCDVDACIIIFS 49


>27893.m000228 mads box protein, putative
          Length = 349

 Score = 54.3 bits (129), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/46 (52%), Positives = 33/46 (71%)

Query: 4  RKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFS 49
          RK  MK++E +  R V+F+KRRNGL  KA EL +LCD ++ V+V S
Sbjct: 5  RKRPMKKLESQKQRSVSFTKRRNGLFNKAAELFMLCDAQLAVLVAS 50


>30190.m010925 conserved hypothetical protein
          Length = 386

 Score = 50.8 bits (120), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/49 (42%), Positives = 33/49 (67%)

Query: 1  MGRRKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFS 49
          MG  +++M+ IE  S+R +T+ KR+  L+KK  E  ILC VE  +I+F+
Sbjct: 1  MGHSRIKMELIEKESTRMLTYQKRKKSLVKKVSEFSILCGVEACLIIFA 49


>28180.m000391 mads box protein, putative
          Length = 328

 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 1/55 (1%)

Query: 4  RKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGR-LYEF 57
          RK+ MK+ E +  R V+F+KRR GL  KA EL +LCD ++ ++V S   R +Y F
Sbjct: 5  RKLPMKKRETKKQRSVSFTKRRYGLFNKAAELFMLCDAQLALLVSSPCSRKVYSF 59


>29838.m001673 mads box protein, putative
          Length = 214

 Score = 46.6 bits (109), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 34/59 (57%)

Query: 2  GRRKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSS 60
          G +  EM  I   S+  VTF  RR G+ +KA E+ IL   E+ ++VF  G +++ FC +
Sbjct: 7  GSQGFEMVNISKESNLLVTFLNRRFGVSRKADEVSILSGAEVTIVVFLPGNKVFSFCHT 65


>29653.m000299 mads box protein, putative
          Length = 166

 Score = 44.7 bits (104), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 9/59 (15%)

Query: 5  KVEMKRIED-RSSRHVTFSKRRNGLIKKARELPILCDV-----EIGVIVFSTGGRLYEF 57
          K+E+K+I+D ++   VTFSKRR GL KKA E    C++     E+ +I FS  GR + F
Sbjct: 29 KIEIKKIQDNKTGLIVTFSKRRTGLFKKAME---FCNLDGGGAEVALITFSPSGRPFSF 84