Jatropha Genome Database

JcCA0080721.40
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0080721.40 - phase: 2 /pseudo/partial
         (176 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m008954 Adenosine 3'-phospho 5'-phosphosulfate transporter...   130   5e-31
30190.m011117 Adenosine 3'-phospho 5'-phosphosulfate transporter...   129   6e-31

>30174.m008954 Adenosine 3'-phospho 5'-phosphosulfate transporter,
           putative
          Length = 350

 Score =  130 bits (326), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 62/81 (76%), Positives = 67/81 (82%)

Query: 4   VLPVMVMGAFIPGLRRKYPAHEYISAVXXXXXXXXXXXADAKTSPNFSIIGVVMISGALI 63
           VLPVMVMGAFIPGLRR+YP HEY+SA+           ADAKTSPNF  IGVVMISGALI
Sbjct: 120 VLPVMVMGAFIPGLRRRYPVHEYVSALLLVVGLILFTLADAKTSPNFHTIGVVMISGALI 179

Query: 64  MDSFLGNLQEAIFTMNPETTQ 84
           MD+FLGNLQEAIFT+NPETTQ
Sbjct: 180 MDAFLGNLQEAIFTINPETTQ 200


>30190.m011117 Adenosine 3'-phospho 5'-phosphosulfate transporter,
           putative
          Length = 348

 Score =  129 bits (325), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 61/81 (75%), Positives = 67/81 (82%)

Query: 4   VLPVMVMGAFIPGLRRKYPAHEYISAVXXXXXXXXXXXADAKTSPNFSIIGVVMISGALI 63
           VLPVM+MGAFIPGLRRKYP HEYISA+           ADA+TSPNFS+IGV+MI GALI
Sbjct: 120 VLPVMIMGAFIPGLRRKYPFHEYISALLLVVGLILFTLADAQTSPNFSMIGVIMICGALI 179

Query: 64  MDSFLGNLQEAIFTMNPETTQ 84
           MDS +GNLQEAIFTMNPETTQ
Sbjct: 180 MDSLMGNLQEAIFTMNPETTQ 200