Jatropha Genome Database

JcCA0080591.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0080591.10 - phase: 0 
         (243 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30169.m006270 glyceraldehyde 3-phosphate dehydrogenase, putative      332   8e-92
30147.m013783 glyceraldehyde 3-phosphate dehydrogenase, putative      211   3e-55
30190.m010986 glyceraldehyde 3-phosphate dehydrogenase, putative      148   3e-36
30170.m013796 glyceraldehyde 3-phosphate dehydrogenase, putative      144   4e-35
30131.m006931 glyceraldehyde 3-phosphate dehydrogenase, putative      133   1e-31
30147.m013787 glyceraldehyde 3-phosphate dehydrogenase, putative       98   3e-21
47543.m000013 glyceraldehyde 3-phosphate dehydrogenase, putative       65   4e-11

>30169.m006270 glyceraldehyde 3-phosphate dehydrogenase, putative
          Length = 426

 Score =  332 bits (852), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 177/251 (70%), Positives = 192/251 (76%), Gaps = 8/251 (3%)

Query: 1   MAFSSLLRSTTAAPXXXXXXXXXX-------XXXXXRF-KDLKSSKSIFXXXXXXXXXXX 52
           MAFS +LRST  +P                       F +DLK+SKS F           
Sbjct: 1   MAFSCILRSTATSPLIEASRSDLSPSPSDPLQASSVNFNRDLKASKSFFGTSVPTASSSL 60

Query: 53  QACCTRSFQPIKATATEMPPTILKSRNDGKTKIGINGFGRIGRLVMRIATFRDDIDVVAV 112
           +AC  RS QPIKAT TEMPPTILKSR+DG+TKIGINGFGRIGRLV+RIAT RDD+DVVAV
Sbjct: 61  EACSARSLQPIKATVTEMPPTILKSRSDGRTKIGINGFGRIGRLVLRIATLRDDVDVVAV 120

Query: 113 NDPFIDTKYMAYMFKYDSTHGGYKGSIKVLDESTLEINGKQIKVSSKRDPAEIPWGDYGA 172
           NDPFIDTKYMAYM KYDSTHG +KG IKV+DESTLEINGKQIKVSSKRDPAEIPWGD+GA
Sbjct: 121 NDPFIDTKYMAYMLKYDSTHGLFKGHIKVVDESTLEINGKQIKVSSKRDPAEIPWGDHGA 180

Query: 173 EYVVESSGVFTTIDXXXXXXXXXXXXVVISAPSADAPMFVVGVNEKTYKPNMDVVSNASC 232
           EYVVE+SGVFTTID            VVISAPSADAPMFVVGVNE+TYKPNMD+VSNASC
Sbjct: 181 EYVVEASGVFTTIDKASAHKKGGAKKVVISAPSADAPMFVVGVNEQTYKPNMDIVSNASC 240

Query: 233 TTNCLAPLAKV 243
           TTNCLAPLAKV
Sbjct: 241 TTNCLAPLAKV 251


>30147.m013783 glyceraldehyde 3-phosphate dehydrogenase, putative
          Length = 337

 Score =  211 bits (536), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 100/163 (61%), Positives = 120/163 (73%), Gaps = 1/163 (0%)

Query: 82  KTKIGINGFGRIGRLVMRIATFRDDIDVVAVNDPFIDTKYMAYMFKYDSTHGGYKG-SIK 140
           K KIGINGFGRIGRLV R+A  RDD+++VAVNDPFI T+YM YMFKYD+ HG +K   +K
Sbjct: 3   KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTEYMTYMFKYDTVHGQWKHHELK 62

Query: 141 VLDESTLEINGKQIKVSSKRDPAEIPWGDYGAEYVVESSGVFTTIDXXXXXXXXXXXXVV 200
           + D+ TL    K + V   R+P EIPW + GAEY+VES+GVFT  D            V+
Sbjct: 63  IKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYIVESTGVFTDKDKAAAHLKGGAKKVI 122

Query: 201 ISAPSADAPMFVVGVNEKTYKPNMDVVSNASCTTNCLAPLAKV 243
           ISAPS DAPMFVVGVNEK Y P++ ++SNASCTTNCLAPLAKV
Sbjct: 123 ISAPSKDAPMFVVGVNEKEYTPDLHIISNASCTTNCLAPLAKV 165


>30190.m010986 glyceraldehyde 3-phosphate dehydrogenase, putative
          Length = 295

 Score =  148 bits (373), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 73/123 (59%), Positives = 86/123 (69%), Gaps = 1/123 (0%)

Query: 122 MAYMFKYDSTHGGYKGS-IKVLDESTLEINGKQIKVSSKRDPAEIPWGDYGAEYVVESSG 180
           M YMFKYD+ HG +K   IKV D+ TL    K + V   R+P EIPWG  GA+YVVES+G
Sbjct: 1   MTYMFKYDTVHGQWKHHDIKVKDDKTLLFGDKAVTVFGFRNPEEIPWGQSGADYVVESTG 60

Query: 181 VFTTIDXXXXXXXXXXXXVVISAPSADAPMFVVGVNEKTYKPNMDVVSNASCTTNCLAPL 240
           VFT  D            V+ISAPS DAPMFV+GVNEK YK ++++VSNASCTTNCLAPL
Sbjct: 61  VFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVMGVNEKDYKSDLNIVSNASCTTNCLAPL 120

Query: 241 AKV 243
           AKV
Sbjct: 121 AKV 123


>30170.m013796 glyceraldehyde 3-phosphate dehydrogenase, putative
          Length = 458

 Score =  144 bits (363), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 79/187 (42%), Positives = 111/187 (59%), Gaps = 11/187 (5%)

Query: 67  ATEMPPTI-----LKSRNDGKTKIGINGFGRIGRLVMRIATFRDD--IDVVAVNDPFIDT 119
           A +M P +      ++    K K+ INGFGRIGR  +R    R D  +DV+ VND     
Sbjct: 65  AAQMAPKVATSTPTRAETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVIVVNDSG-GV 123

Query: 120 KYMAYMFKYDSTHGGYKGSIKVLDESTLEINGKQIKVSSKRDPAEIPWGDYGAEYVVESS 179
           K  +++ KYDS  G +K  +K++D +T+ ++GK IKV S RDP ++PW + G + V+E +
Sbjct: 124 KNASHLLKYDSMLGTFKADVKIVDNTTISVDGKPIKVVSNRDPLKLPWAELGIDIVIEGT 183

Query: 180 GVFTTIDXXXXXXXXXXXXVVISAPS--ADAPMFVVGVNEKTYKPNM-DVVSNASCTTNC 236
           GVF                V+I+AP+  AD P +VVGVNEK Y   + ++VSNASCTTNC
Sbjct: 184 GVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYSHEVANIVSNASCTTNC 243

Query: 237 LAPLAKV 243
           LAP  KV
Sbjct: 244 LAPFVKV 250


>30131.m006931 glyceraldehyde 3-phosphate dehydrogenase, putative
          Length = 404

 Score =  133 bits (334), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/171 (41%), Positives = 100/171 (58%), Gaps = 4/171 (2%)

Query: 76  KSRNDGKTKIGINGFGRIGRLVMRIATFRDD--IDVVAVNDPFIDTKYMAYMFKYDSTHG 133
           K+  + K K+ INGFGRIGR  +R    R D  +DV+A+ND     K  +++ KYDST G
Sbjct: 63  KTVAEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTG-GVKQASHLLKYDSTLG 121

Query: 134 GYKGSIKVLDESTLEINGKQIKVSSKRDPAEIPWGDYGAEYVVESSGVFTTIDXXXXXXX 193
            +   +K +    + ++GK I+V S R+PA +PW D G + V+E +GVF   +       
Sbjct: 122 IFDADVKPVGTDGISVDGKVIQVVSDRNPANLPWKDLGIDLVIEGTGVFVDREGAGKHIQ 181

Query: 194 XXXXXVVISAPS-ADAPMFVVGVNEKTYKPNMDVVSNASCTTNCLAPLAKV 243
                V+I+AP   D P +VVGVN   Y  +  ++SNASCTTNCLAP  KV
Sbjct: 182 AGAKKVLITAPGKGDIPTYVVGVNADGYSADEPIISNASCTTNCLAPFVKV 232


>30147.m013787 glyceraldehyde 3-phosphate dehydrogenase, putative
          Length = 72

 Score = 98.2 bits (243), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/70 (62%), Positives = 55/70 (78%), Gaps = 1/70 (1%)

Query: 81  GKTKIGINGFGRIGRLVMRIATFRDDIDVVAVNDPFIDTKYMAYMFKYDSTHGGYK-GSI 139
           GK KIGINGFGRIGRLV R+A  RDD+++VAVNDPFI T+YM YMFKYD+ HG +K   +
Sbjct: 2   GKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTEYMTYMFKYDTVHGQWKHHEL 61

Query: 140 KVLDESTLEI 149
           K+ D+ T  +
Sbjct: 62  KIKDDKTTSL 71


>47543.m000013 glyceraldehyde 3-phosphate dehydrogenase, putative
          Length = 206

 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 27/34 (79%), Positives = 31/34 (91%)

Query: 210 MFVVGVNEKTYKPNMDVVSNASCTTNCLAPLAKV 243
           MFVVGVNEK Y P++ ++SNASCTTNCLAPLAKV
Sbjct: 1   MFVVGVNEKEYTPDLHIISNASCTTNCLAPLAKV 34