Jatropha Genome Database

JcCA0079711.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0079711.20 - phase: 2 /partial
         (130 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29598.m000471 calcium ion binding protein, putative                   149   4e-37

>29598.m000471 calcium ion binding protein, putative
          Length = 327

 Score =  149 bits (375), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 74/105 (70%), Positives = 89/105 (84%)

Query: 26  QLLNNEEKVKNVMEKVLQEKHSKKNDQKDTEIIRGFLEENGKELGLPPSEANEAVMLLYD 85
           +LL  E+K+ NV EK+LQ+K  KK  Q + EIIR FLEENGKELGLP SEANEAV+LLYD
Sbjct: 223 KLLMTEKKLNNVTEKMLQDKRGKKAGQNNAEIIRDFLEENGKELGLPASEANEAVVLLYD 282

Query: 86  AVFAEVECGKCIAESEDEFRELVKEILKNFAQQLQANPVYCDLDN 130
           AVF++++  KC AESEDEF+ELVKEIL+ FA+QL+ANPVYCDLDN
Sbjct: 283 AVFSDIKNEKCAAESEDEFKELVKEILEKFAEQLEANPVYCDLDN 327