Jatropha Genome Database

JcCA0079611.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0079611.20 + phase: 0 /partial
         (392 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29630.m000833 alpha-amylase, putative                                 798   0.0  
29736.m002033 alpha-amylase, putative                                 504   e-143
30170.m014309 alpha-amylase, putative                                 414   e-116
30170.m013878 pentatricopeptide repeat-containing protein, putative   392   e-109
30170.m013877 alpha-amylase, putative                                 379   e-105

>29630.m000833 alpha-amylase, putative
          Length = 972

 Score =  798 bits (2061), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/392 (92%), Positives = 377/392 (96%)

Query: 1   FQGFNWESWRRRWYVELAPKAADLYQSGVTAVWFPPPTESVAPQGYMPSDLYNLNSAYGT 60
           FQGFNWESWRR+WYVELA K ADL Q GVTAVW PPPTESVAPQGYMPSDLYNLNSAYGT
Sbjct: 581 FQGFNWESWRRQWYVELATKMADLSQCGVTAVWLPPPTESVAPQGYMPSDLYNLNSAYGT 640

Query: 61  EEELKYCIEEMHSHDLLALGDVVLNHRCAQKQSPNGVWNIFGGKISWGPEAIVCDDPNFQ 120
           EEELKYCIEEMHSHD+LALGDVVLNHRCAQKQSPNGVWNIFGGK++WGPEAIVCDDPNFQ
Sbjct: 641 EEELKYCIEEMHSHDILALGDVVLNHRCAQKQSPNGVWNIFGGKLAWGPEAIVCDDPNFQ 700

Query: 121 GRGNPSSGDIFHAAPNIDHSQDFVRKDIKVWLNWLRSHICFDGWRLDFVRGFSGTYFKEY 180
           G GNPSSGDIFHAAPNIDHSQDFVR+DIK WLNWLR+HI FDGWRLDFVRGFSGTY KEY
Sbjct: 701 GCGNPSSGDIFHAAPNIDHSQDFVRRDIKEWLNWLRNHIGFDGWRLDFVRGFSGTYVKEY 760

Query: 181 IEASDPAFAIGEYWDSLAYENGSLCYNQDAHRQRIVNWINATGGTSSAFDVTTKGILHSA 240
           IE S+PAFAIGEYWDSLAYE+GSLCYNQDAHRQRI+NWINATGGTSSAFDVTTKGILHSA
Sbjct: 761 IETSNPAFAIGEYWDSLAYEHGSLCYNQDAHRQRIINWINATGGTSSAFDVTTKGILHSA 820

Query: 241 LHNQYWRLIDPQGKPTGVMGWWPSRAVTFLENHDTGSTQGHWPFPRDKLMQGYAYILTHP 300
           LHNQYWRLIDPQGKPTGVMGWWPSRAVTFLENHDTGSTQGHWPFPRDKL QGYAYILTHP
Sbjct: 821 LHNQYWRLIDPQGKPTGVMGWWPSRAVTFLENHDTGSTQGHWPFPRDKLAQGYAYILTHP 880

Query: 301 GTPTIFYDHFYDFGIRDVITELVEARKRADIHCRSSVKIYHANNEGYVAQIGDTLVMKLG 360
           GTP IFYDHFYDFG+RD+ITELVEARKRA IHCRSSVKIYHANNEGYVAQIGDTLVMKLG
Sbjct: 881 GTPVIFYDHFYDFGVRDIITELVEARKRAGIHCRSSVKIYHANNEGYVAQIGDTLVMKLG 940

Query: 361 HFDWNPSKEINLDGSWQKFVDKGSDYQVWLRQ 392
            FDWNPSKE NLDGSWQKFVDKG+DYQ+WLRQ
Sbjct: 941 DFDWNPSKENNLDGSWQKFVDKGADYQLWLRQ 972


>29736.m002033 alpha-amylase, putative
          Length = 900

 Score =  504 bits (1297), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 244/391 (62%), Positives = 294/391 (75%), Gaps = 8/391 (2%)

Query: 1   FQGFNWESWRR-RWYVELAPKAADLYQSGVTAVWFPPPTESVAPQGYMPSDLYNLNSAYG 59
            QGFNWES +  RW++EL  KAA++   G T +W PPPTESV+P+GYMP DLYNLNS YG
Sbjct: 513 LQGFNWESNKSGRWHMELKEKAAEISSLGFTVIWLPPPTESVSPEGYMPKDLYNLNSRYG 572

Query: 60  TEEELKYCIEEMHSHDLLALGDVVLNHRCAQKQSPNGVWNIFGGKISWGPEAIVCDDPNF 119
           + +ELK  ++ +H   L  LGD VLNHRCA  Q+ NGVWNIFGG+++W   AIV DDP+F
Sbjct: 573 SIDELKDLVKSLHRVGLKVLGDAVLNHRCAHFQNQNGVWNIFGGRLNWDDRAIVADDPHF 632

Query: 120 QGRGNPSSGDIFHAAPNIDHSQDFVRKDIKVWLNWLRSHICFDGWRLDFVRGFSGTYFKE 179
           QGRG+ SSGD FHAAPNIDHSQDFVR+D+K WL WLR  I ++GWRLDFVRGF G Y K+
Sbjct: 633 QGRGSKSSGDNFHAAPNIDHSQDFVRQDLKEWLCWLRDEIGYNGWRLDFVRGFWGGYVKD 692

Query: 180 YIEASDPAFAIGEYWDSLAYENGSLCYNQDAHRQRIVNWINATGGTSSAFDVTTKGILHS 239
           Y+EA++P FA+GEYWDSL+Y  G + +NQDAHRQRI++WINAT GT+ AFDVTTKGILHS
Sbjct: 693 YMEATEPYFAVGEYWDSLSYTYGEMDHNQDAHRQRIIDWINATNGTAGAFDVTTKGILHS 752

Query: 240 ALHN-QYWRLIDPQGKPTGVMGWWPSRAVTFLENHDTGSTQGHWPFPRDKLMQGYAYILT 298
           AL   +YWRL D +GKP GV+GWWPSRAVTF+ENHDTGSTQGHW FP  K MQGYAYILT
Sbjct: 753 ALDRCEYWRLSDQKGKPPGVVGWWPSRAVTFIENHDTGSTQGHWRFPNGKEMQGYAYILT 812

Query: 299 HPGTPTIFYDHFYDFGIRDVITELVEARKRADIHCRSSVKIYHANNEGYVAQIGDTLVMK 358
           HPGTPT+FYDH +    R  I  L+  RKR +IHCRSSVKI  A  + Y A I + + MK
Sbjct: 813 HPGTPTVFYDHIFSH-YRSEIASLISLRKRNEIHCRSSVKITKAERDVYAAIIEEKVAMK 871

Query: 359 LGHFDWNPSKEINLDGSWQKFVDKGSDYQVW 389
           +G   + P    N    W   ++ G DY+VW
Sbjct: 872 IGPGHYEPPSGKN----WSMAIE-GKDYKVW 897


>30170.m014309 alpha-amylase, putative
          Length = 398

 Score =  414 bits (1065), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/395 (51%), Positives = 266/395 (67%), Gaps = 14/395 (3%)

Query: 1   FQGFNWESWRRRWYVELAPKAADLYQSGVTAVWFPPPTESVAPQGYMPSDLYNLNSAYGT 60
            Q FNWES +  W+  L  K  D+ +SG T+ W PPP++S++P+GY+P +LY+LNS YG+
Sbjct: 14  LQAFNWESHKHDWWRNLERKVPDIAKSGFTSAWLPPPSQSLSPEGYLPQNLYSLNSVYGS 73

Query: 61  EEELKYCIEEMHSHDLLALGDVVLNHRCAQKQSPNGVWNIFGG-KISWGPEAI-VCDDPN 118
           E  LK  +++M  +++ A+ D+V+NHR    +   G++N + G  I W   A+ +C    
Sbjct: 74  EHLLKALLQKMKQYNVRAMADIVINHRIGTTKGHGGMYNRYDGIPIPWDERAVTLCTG-- 131

Query: 119 FQGRGNPSSGDIFHAAPNIDHSQDFVRKDIKVWLNWLRSHICFDGWRLDFVRGFSGTYFK 178
             G GN S+GD F+  PNIDH+Q FVRKDI  WL WLR+ + F  +R DF RG+S  Y K
Sbjct: 132 --GLGNRSTGDNFNGVPNIDHTQHFVRKDIIGWLKWLRNVVGFQDFRFDFARGYSAKYVK 189

Query: 179 EYIEASDPAFAIGEYWDSLAYENGSLCYNQDAHRQRIVNWINATGGTSSAFDVTTKGILH 238
           EYIEA+ P F+IGEYWDS  Y    L Y+QD+HRQRIVNWI+ TG  S+AFD TTKGIL 
Sbjct: 190 EYIEAAKPIFSIGEYWDSCNYSGTYLEYSQDSHRQRIVNWIDCTGQLSAAFDFTTKGILQ 249

Query: 239 SALHNQYWRLIDPQGKPTGVMGWWPSRAVTFLENHDTGSTQGHWPFPRDKLMQGYAYILT 298
            A+  Q WRL D +GKP GVMGWWPSRAVTF++NHDTGSTQGHWPFP   +M+GYAYILT
Sbjct: 250 EAVKGQLWRLRDSKGKPPGVMGWWPSRAVTFIDNHDTGSTQGHWPFPSHHIMEGYAYILT 309

Query: 299 HPGTPTIFYDHFYDFG--IRDVITELVEARKRADIHCRSSVKIYHANNEGYVAQIGDTLV 356
           HPG PT+FYDHFYD+G  I + I +L++ RKR DI+ RSS++I  A    Y A IG+ + 
Sbjct: 310 HPGIPTVFYDHFYDWGNSIHEQIVKLIDIRKRQDINSRSSIRILEAQPNLYSAIIGEKVC 369

Query: 357 MKLGHFDWNPSKEINLDGSWQKFVDKGSDYQVWLR 391
           MK+G   W+PS      G        G  Y VW +
Sbjct: 370 MKIGDGSWSPS------GREWTLATSGHRYAVWQK 398


>30170.m013878 pentatricopeptide repeat-containing protein, putative
          Length = 1113

 Score =  392 bits (1007), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 199/405 (49%), Positives = 262/405 (64%), Gaps = 21/405 (5%)

Query: 1   FQGFNWESWRRR--WYVELAPKAADLYQSGVTAVWFPPPTESVAPQGYMPSDLYNLN-SA 57
           FQGFNWES  +   WY  L     D+  +G+T VW PPP++SV+PQGYMP  LY+LN S 
Sbjct: 29  FQGFNWESCNKGGGWYNLLKNSILDIANAGITHVWLPPPSQSVSPQGYMPGRLYDLNASR 88

Query: 58  YGTEEELKYCIEEMHSHDLLALGDVVLNHRCAQKQSPNGVWNIFGG-----KISWGPEAI 112
           YGT++ELK  I   H   +  L D+V+NHR A+K+   G+W IF G     ++ WGP  I
Sbjct: 89  YGTQDELKSLIRAFHHKGIKCLADIVINHRTAEKKDERGIWCIFEGGTDDDRLDWGPSFI 148

Query: 113 VCDDPNFQ-GRGNPSSGDIFHAAPNIDHSQDFVRKDIKVWLNWLRSHICFDGWRLDFVRG 171
            CDD  F  G GNP +G+ +  AP+IDH    V+K++  W+NWL+  I F GWR DF +G
Sbjct: 149 CCDDTVFSDGTGNPDTGEDYPPAPDIDHLNPRVQKELSDWMNWLKLEIGFGGWRFDFAKG 208

Query: 172 FSGTYFKEYIEASDPAFAIGEYWDSLAY-ENGSLCYNQDAHRQRIVNWINATGGTSSAFD 230
           +S T  K Y+E   P FA+GE WDSL+Y ++    YNQDAHR  + +WI A+GG  +AFD
Sbjct: 209 YSPTIMKIYMEQIPPGFAVGEKWDSLSYGQDWKPDYNQDAHRNALKDWIQASGGVITAFD 268

Query: 231 VTTKGILHSALHNQYWRLIDPQGKPTGVMGWWPSRAVTFLENHDTGSTQGHWPFPRDKLM 290
            TTKGIL +A+  + WRLID  G P G++G  P  AVTF++NHDTGSTQ  WPFP DK+M
Sbjct: 269 FTTKGILQAAVQGELWRLIDSNGNPPGLIGIMPQNAVTFIDNHDTGSTQQLWPFPSDKVM 328

Query: 291 QGYAYILTHPGTPTIFYDHFYDFGIRDVITELVEARKRADIHCRSSVKIYHANNEGYVAQ 350
           QGYAYILTHPG PTIFYDHF+D+G+++ I++L   RK   I  RS +KI  A ++ Y+A 
Sbjct: 329 QGYAYILTHPGIPTIFYDHFFDWGLKEQISKLASIRKNYGIDSRSGMKILAAESDLYMAA 388

Query: 351 IGDTLVMKLG-HFDWN---PSKEINLDGSWQKFVDKGSDYQVWLR 391
           I D ++MK+G   D     PSKE  +  S       G  Y VW++
Sbjct: 389 INDNVIMKIGPRMDLGNLLPSKEFQVATS-------GESYAVWVK 426


>30170.m013877 alpha-amylase, putative
          Length = 422

 Score =  379 bits (973), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 192/406 (47%), Positives = 261/406 (64%), Gaps = 21/406 (5%)

Query: 1   FQGFNWESWRRR--WYVELAPKAADLYQSGVTAVWFPPPTESVAPQGYMPSDLYNLN-SA 57
           FQGFNWES  +   WY  L     D+  +G+T VW PP ++SVAPQGYMP  LY+L+ S 
Sbjct: 23  FQGFNWESCNKEGGWYNSLKNFVPDIASAGITHVWLPPSSQSVAPQGYMPGRLYDLSVSK 82

Query: 58  YGTEEELKYCIEEMHSHDLLALGDVVLNHRCAQKQSPNGVWNIFGG-----KISWGPEAI 112
           YG ++ELK  I+ +H   +  L D+V+NHR A+KQ   G+W IF G     ++ WGP  I
Sbjct: 83  YGNQDELKSLIQALHQKGIKCLADIVINHRTAEKQDERGIWCIFEGGTADDRLDWGPSFI 142

Query: 113 VCDDPNFQ-GRGNPSSGDIFHAAPNIDHSQDFVRKDIKVWLNWLRSHICFDGWRLDFVRG 171
             DD  +  G+GNP +G  F  AP+IDH    V++++  W+NWL+S I FDGWR D+V+G
Sbjct: 143 CRDDTAYSDGKGNPDTGGDFEPAPDIDHLNPRVQQELSDWMNWLKSEIGFDGWRFDYVKG 202

Query: 172 FSGTYFKEYIEASDPAFAIGEYWDSLAY-ENGSLCYNQDAHRQRIVNWINATGGTSSAFD 230
           ++ +  K Y+  + P FA+GE WDSL+Y ++    YNQD HR  + +WI A GG  +AFD
Sbjct: 203 YAPSITKIYMGKTTPDFAVGEKWDSLSYGQDRKPDYNQDGHRNALKDWIQAAGGVITAFD 262

Query: 231 VTTKGILHSALHNQYWRLIDPQGKPTGVMGWWPSRAVTFLENHDTGSTQGHWPFPRDKLM 290
            TTKGIL +A+  + WRL D  G P G++G  P  AVTF++NHDTGSTQ  WPFP DK+M
Sbjct: 263 FTTKGILQAAVQGELWRLKDSNGNPPGLIGTMPQNAVTFIDNHDTGSTQQLWPFPSDKVM 322

Query: 291 QGYAYILTHPGTPTIFYDHFYDFGIRDVITELVEARKRADIHCRSSVKIYHANNEGYVAQ 350
           QGYAYILTHPG P+IFYDHF+D+G+++ I+ L   RK   I  +S VKI  A ++ Y+A 
Sbjct: 323 QGYAYILTHPGIPSIFYDHFFDWGLKEPISRLASIRKSYGIDSKSRVKIVAAESDLYMAA 382

Query: 351 IGDTLVMKLG-HFDWN---PSKEINLDGSWQKFVDKGSDYQVWLRQ 392
           I D ++MK+G   D     PSKE  +  S       G  Y VW+++
Sbjct: 383 INDNVIMKIGPKMDLGNLLPSKEFQVATS-------GESYAVWVKK 421