Jatropha Genome Database

JcCA0078611.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0078611.10 - phase: 2 /TE/partial
         (1269 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28574.m000034 conserved hypothetical protein                           72   2e-12
30202.m000249 conserved hypothetical protein                           68   4e-11
29669.m000842 conserved hypothetical protein                           60   6e-09
28331.m000097 conserved hypothetical protein                           58   4e-08
29823.m000212 hypothetical protein                                     55   3e-07
30152.m002416 conserved hypothetical protein                           54   6e-07
29766.m000122 conserved hypothetical protein                           52   3e-06
29506.m000168 conserved hypothetical protein                           51   4e-06
30065.m001147 conserved hypothetical protein                           51   4e-06

>28574.m000034 conserved hypothetical protein
          Length = 110

 Score = 72.0 bits (175), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 6/88 (6%)

Query: 139 VIEYFTQLKILWDELLNFRPIPTCSYATPCSCGAIGVFKTFMENDCVIRFLKGLNDQYAH 198
           +I +FT+LK LWDE       P      PC C A    KT++E+   ++FL GL +Q+A+
Sbjct: 1   MIAFFTKLKTLWDEKDALNAFP------PCHCEAASQIKTYLESQKTMQFLMGLGEQFAN 54

Query: 199 VKSQAMMLDHLPSMNKFFSLVIQQERQL 226
           V S  + +D LP +NK +S+ ++ E+Q+
Sbjct: 55  VHSMVISMDALPEINKAYSMALRHEKQV 82


>30202.m000249 conserved hypothetical protein
          Length = 253

 Score = 67.8 bits (164), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/103 (31%), Positives = 61/103 (59%), Gaps = 4/103 (3%)

Query: 139 VIEYFTQLKILWDELLNFRPIPTCSYATPCSCGAIGVFKTFMENDCVIRFLKGLNDQYAH 198
           V ++FT L  +W EL NFR +P C+Y + C+      +    + D + +FL GL+  +  
Sbjct: 143 VDDFFTDLNGIWKELRNFRLLPHCTYGS-CNQSYFQTYIDLQQKDYIFKFLNGLDGFFQG 201

Query: 199 VKSQAMMLDHLPSMNKFFSLVIQQERQL---LYTSTSESKALL 238
           ++SQ M+++  PS+++ +S+V+++E Q    L + TS   A++
Sbjct: 202 LRSQIMIMNQFPSVDQAYSMVLRKESQRSIHLQSQTSNDAAIM 244


>29669.m000842 conserved hypothetical protein
          Length = 207

 Score = 60.1 bits (144), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 2/76 (2%)

Query: 21  SNPYFLHLNENPALVIVSPVLFGSNYLSWAKAIKMALISKKKMVFVNGSMPPPSXAD--L 78
           S+P   H +++  +++ S  L G NY  W +AIK+AL  K K+ FV GS  PPS      
Sbjct: 27  SDPNHTHHSDHTGMILFSKTLNGDNYPGWKRAIKLALNLKNKLRFVEGSCEPPSKEKHPD 86

Query: 79  RYSTXERCNTMILSWI 94
            Y +  RCN M+ SWI
Sbjct: 87  SYGSWSRCNDMVHSWI 102


>28331.m000097 conserved hypothetical protein
          Length = 125

 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 46/78 (58%)

Query: 17 LQNPSNPYFLHLNENPALVIVSPVLFGSNYLSWAKAIKMALISKKKMVFVNGSMPPPSXA 76
            + S+PYFLH  EN + VI++P L   NY SW  +  +A+  + K  F+NGS   P   
Sbjct: 19 FDDASSPYFLHHTENHSSVILTPELTAINYTSWRSSFLLAISIRNKQDFLNGSTIKPPIQ 78

Query: 77 DLRYSTXERCNTMILSWI 94
          D  + + +RCN ++++W+
Sbjct: 79 DPIFQSWKRCNNLLIAWL 96


>29823.m000212 hypothetical protein
          Length = 215

 Score = 54.7 bits (130), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 43/172 (25%)

Query: 15  DHLQNPSNPYFLHLNENPALVIVSPVLFGSNYLSWAKAIKMALISKKKMVFVNGSMPPPS 74
           +  ++PS+P+FLH  EN + VIVSP L   N+ SW ++  + +  + K V ++   P   
Sbjct: 19  NPFKDPSSPFFLHHAENHSPVIVSPELTSMNFASWKRSFLLVVSIRNKQVSISKPAP--- 75

Query: 75  XADLRYSTXERCNTMILSWITKYIMDXXGIXCMEXFARSFPSRXCITNLKSPRRNFXFKQ 134
             D  Y    RCN ++++W+ + I                                    
Sbjct: 76  -KDPLYLPWIRCNNLMVAWLLRSI-----------------------------------S 99

Query: 135 GQLSVIEYFTQ---LKILWDELLNFRPIPTCSYATPCSCGAIGVFKTFMEND 183
             +S   ++ +   L  +W+EL NFRP P C+    C+     VF    + D
Sbjct: 100 APISSTVFYMEEANLNGIWEELRNFRPHPHCACGK-CNPSCFQVFIDIQQKD 150


>30152.m002416 conserved hypothetical protein
          Length = 147

 Score = 53.5 bits (127), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 15/119 (12%)

Query: 149 LWDELLNFRPIPTCSYATPCSCGAIGVFKTFMENDCVIRFLKGLNDQYAHVKSQAMMLDH 208
           LW+EL+   PIP C+      CGA          + +++FL GLND   ++++Q + +D 
Sbjct: 4   LWNELVCLMPIPICT------CGAAKGVADITSFNRLMQFLMGLNDSSDNMRNQVLEMDP 57

Query: 209 LPSMNKFFSLVIQQERQ----LLYTSTSESKALLNKSFRPNTSFN-----NSYGNKNGT 258
            PS N  +S+V + E+Q     ++  T E  A++ ++    T+        S+  +NG+
Sbjct: 58  FPSANIAYSMVFRVEKQREVPTIFPKTDEIVAMMIRAQNFKTTGKGGAGRGSWSGRNGS 116


>29766.m000122 conserved hypothetical protein
          Length = 206

 Score = 51.6 bits (122), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 28/48 (58%)

Query: 141 EYFTQLKILWDELLNFRPIPTCSYATPCSCGAIGVFKTFMENDCVIRF 188
           +YFTQLKILWDE LN R +P CS    C C A+ + K   E    I +
Sbjct: 38  DYFTQLKILWDEYLNLRMVPVCSCNPQCHCDALKIVKDHQEAQANISY 85


>29506.m000168 conserved hypothetical protein
          Length = 128

 Score = 50.8 bits (120), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 18/71 (25%), Positives = 46/71 (64%)

Query: 29  NENPALVIVSPVLFGSNYLSWAKAIKMALISKKKMVFVNGSMPPPSXADLRYSTXERCNT 88
           N++P + ++S ++  +NY+ W++++K+AL +K K+ ++NG +  P+    +Y   ++ + 
Sbjct: 37  NDSPGMPLISTLMNENNYIPWSRSVKLALGAKDKLGYINGEIAKPASTAKKYKMWKKTDC 96

Query: 89  MILSWITKYIM 99
           ++ +WI   I+
Sbjct: 97  LVAAWILSSIL 107


>30065.m001147 conserved hypothetical protein
          Length = 201

 Score = 50.8 bits (120), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 54/97 (55%), Gaps = 4/97 (4%)

Query: 158 PIPTCSYATPCSCGAIGVFKTFMENDCVIRFLKGLNDQYAHVKSQAMMLDHLPSMNKFFS 217
           P+P C   + C+C       T    + +++ L GLND Y  V+SQ ++++ LP +N  +S
Sbjct: 8   PMPEC-VCSHCTCEVSKKVSTLNGRNRIMQLLMGLNDGYEAVRSQVLLMEPLPGINNVYS 66

Query: 218 LVIQQER-QLLYTSTSESKALLNKSFRPNTSFNNSYG 253
           ++++ E+ +++Y    +     ++S+R ++  N  YG
Sbjct: 67  MILRIEKLRIVYNFVLDHAK--SQSYRKDSGENKVYG 101