Jatropha Genome Database

JcCA0078521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0078521.10 - phase: 0 /pseudo/partial
         (320 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29785.m000952 histidinol-phosphate aminotransferase, putative         358   1e-99
29908.m006160 Aminotransferase ybdL, putative                          52   3e-07

>29785.m000952 histidinol-phosphate aminotransferase, putative
          Length = 423

 Score =  358 bits (920), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 178/215 (82%), Positives = 187/215 (86%), Gaps = 11/215 (5%)

Query: 3   PLSPILPFEVLSAKLGRKPEDIIKLDANENPYGPPPEVFEALGSLKFPYIYPDPQSRGLR 62
           P  PILPFEVLSA LGRKPEDI+KLDANENPYGPPPE  EALGSLKFPYIYPDP+SR LR
Sbjct: 76  PYQPILPFEVLSASLGRKPEDIVKLDANENPYGPPPEATEALGSLKFPYIYPDPESRRLR 135

Query: 63  EALAQDSGLESDYILVGI-----------CTLDPGDKIVDCPPTFTMYQFDAAVNGAEVI 111
           EALA+DS LES++ILVG            CTLDPGDKIVDCPPTFTMY+FDAAVNGAEVI
Sbjct: 136 EALAKDSDLESNHILVGCGADELIDLIMRCTLDPGDKIVDCPPTFTMYEFDAAVNGAEVI 195

Query: 112 KVLRKPDFSLNVELISDVVRQENPKCIFLTSPNNPDGSIINDEDLLKILDLPILVVLDEA 171
           KV+RKPDFSLNVELI D V +E PKCIFLTSPNNPDGSII+DEDLLKIL LPILVVLDEA
Sbjct: 196 KVMRKPDFSLNVELIVDAVLREKPKCIFLTSPNNPDGSIISDEDLLKILQLPILVVLDEA 255

Query: 172 YIEFSGLESRMKWVKKHDNLIVLRTFSKRAAFGEL 206
           YIEFSGLESRMKWVKKHDNLIVLRTFSKRA    L
Sbjct: 256 YIEFSGLESRMKWVKKHDNLIVLRTFSKRAGLAGL 290


>29908.m006160 Aminotransferase ybdL, putative
          Length = 462

 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 71/141 (50%), Gaps = 21/141 (14%)

Query: 51  YIYPDPQSRGLREALAQDSGL----ESDYILVGICT----------LDPGDKIVDCPPTF 96
           Y  PD  S  + +   +D+GL    E +  +   CT          +DPGD+++   P +
Sbjct: 139 YGVPDFNS-AIVDRFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLIDPGDEVILFAPFY 197

Query: 97  TMYQFDAAVNGAEVIKV-LRKPDFSLNVELISDVVRQENPKCIFLTSPNNPDGSIINDED 155
             Y+   ++ GA++  V L+ PDF++ ++ +  ++ + N + I + +P+NP G +   E+
Sbjct: 198 DSYEATLSMAGAKIKCVTLQPPDFAVPIDELKSIISK-NTRAILINTPHNPTGKMFTREE 256

Query: 156 LLKI----LDLPILVVLDEAY 172
           L  I    ++  +LV  DE Y
Sbjct: 257 LTTIASCCIENDVLVFTDEVY 277