Jatropha Genome Database

JcCA0078491.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0078491.20 - phase: 0 
         (221 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29983.m003305 serine palmitoyltransferase I, putative                 330   4e-91
30131.m006861 serine palmitoyltransferase, putative                    80   5e-16

>29983.m003305 serine palmitoyltransferase I, putative
          Length = 482

 Score =  330 bits (845), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 156/185 (84%), Positives = 167/185 (90%)

Query: 35  DEGVHWGIQNGLYLSRSTIVYFKHNDMESLQNVLEKVTAENKRAKKLRRYIIVEAVYQNS 94
           DEGVHWGIQNGLYLSRSTIVYFKHNDMESLQN LEK+TAE KRAK+LRRYI+VEAVYQNS
Sbjct: 200 DEGVHWGIQNGLYLSRSTIVYFKHNDMESLQNTLEKITAEKKRAKQLRRYIVVEAVYQNS 259

Query: 95  GQIAPLDEIIRLKEKYHFRVLLEESNSIGVLGRSGKGLTEYYGVPVEKIDIITAAMGHAL 154
           GQIAPL+EII+LKEKY FRVLL+ESNS GVLGR G+GLTEYYGVPVEKIDIITAAMGHAL
Sbjct: 260 GQIAPLNEIIKLKEKYRFRVLLDESNSFGVLGRFGRGLTEYYGVPVEKIDIITAAMGHAL 319

Query: 155 ATEGGFCTGTARIIDHQRLSSSGYTFXXXXXXXXXXXXITAIDVIEDNPALVTKLKENIA 214
           ATEGGFCTG+AR+IDHQRLSSSGY F            ITAIDV+EDNPAL+TKLKENIA
Sbjct: 320 ATEGGFCTGSARVIDHQRLSSSGYVFSASLPPYLASAAITAIDVLEDNPALITKLKENIA 379

Query: 215 VLWKG 219
           VLWKG
Sbjct: 380 VLWKG 384


>30131.m006861 serine palmitoyltransferase, putative
          Length = 488

 Score = 80.5 bits (197), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 82/164 (50%), Gaps = 3/164 (1%)

Query: 39  HWGIQNGLYLSRSTIVYFKHNDMESLQNVL-EKVTAENKRAKKL--RRYIIVEAVYQNSG 95
           H  I NG   S +TI  F+HN    L+ VL E++     R  +   +  +IVE +Y   G
Sbjct: 195 HNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIADGQPRTHRPWKKIMVIVEGIYSMEG 254

Query: 96  QIAPLDEIIRLKEKYHFRVLLEESNSIGVLGRSGKGLTEYYGVPVEKIDIITAAMGHALA 155
           ++  L EII + +KY     L+E++SIG +G++G+G+ E  GV    +DI+      +  
Sbjct: 255 ELCKLPEIIAICKKYKAFTYLDEAHSIGAVGKTGRGVCELLGVDTADVDIMMGTFTKSFG 314

Query: 156 TEGGFCTGTARIIDHQRLSSSGYTFXXXXXXXXXXXXITAIDVI 199
           + GG+  G+  +I + + +   + +            I++I VI
Sbjct: 315 SCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISSIKVI 358