Jatropha Genome Database

JcCA0078121.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0078121.10 + phase: 0 /partial
         (164 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m009049 longevity assurance factor, putative                    241   1e-64
36771.m000012 longevity assurance factor, putative                    228   1e-60
29801.m003184 longevity assurance factor, putative                    113   5e-26
30138.m003858 hypothetical protein                                     87   4e-18

>30174.m009049 longevity assurance factor, putative
          Length = 308

 Score =  241 bits (615), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 114/164 (69%), Positives = 132/164 (80%)

Query: 1   MGFIDHVKSIEWENESYPAYEDYIVLPLFALFFPSVRFFLDRFVFEKVAKRLIFGKGYRT 60
           MG +     I WE+ESYP   D+  +P FALFFPSVR FLD +VFEK+A+RLIFGK   +
Sbjct: 1   MGVVGTNGFINWESESYPEAIDFSAVPFFALFFPSVRLFLDTYVFEKLARRLIFGKASTS 60

Query: 61  LDVETDERKKKIRKFKESAWKCVYFLSGEILALTVTYNEPWFTNTKYFWVGPGNQVWPDQ 120
            DV T E +KKI KFKESAWK +YF S EILAL+V+YNEPWFTNTKYFWVGP +Q+WPDQ
Sbjct: 61  TDVATHENRKKINKFKESAWKYIYFSSAEILALSVSYNEPWFTNTKYFWVGPEDQIWPDQ 120

Query: 121 KMKLKLKGVYMYAAGFYTYSIFALIFWETRRSDFGVTGSHHVAT 164
           K+KLKLKG YM+ AGFY YSIFALIFWETRRSDF V+ +HHVAT
Sbjct: 121 KLKLKLKGHYMFVAGFYIYSIFALIFWETRRSDFAVSMAHHVAT 164


>36771.m000012 longevity assurance factor, putative
          Length = 265

 Score =  228 bits (581), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 103/121 (85%), Positives = 116/121 (95%)

Query: 44  VFEKVAKRLIFGKGYRTLDVETDERKKKIRKFKESAWKCVYFLSGEILALTVTYNEPWFT 103
           + +KVA RLIFG+G++ LDVE+DERKKKI+KFKESAWKC+YFLSGE+LAL+VTYNEPWFT
Sbjct: 1   MLQKVASRLIFGRGHQNLDVESDERKKKIQKFKESAWKCMYFLSGEVLALSVTYNEPWFT 60

Query: 104 NTKYFWVGPGNQVWPDQKMKLKLKGVYMYAAGFYTYSIFALIFWETRRSDFGVTGSHHVA 163
           NTKYFWVGPG+QVWPDQKMKLKLK VYMYAAGFYTYSIFALIFWETRRSDFGV+ SHH+A
Sbjct: 61  NTKYFWVGPGDQVWPDQKMKLKLKAVYMYAAGFYTYSIFALIFWETRRSDFGVSMSHHIA 120

Query: 164 T 164
           T
Sbjct: 121 T 121


>29801.m003184 longevity assurance factor, putative
          Length = 315

 Score =  113 bits (282), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 90/158 (56%), Gaps = 7/158 (4%)

Query: 7   VKSIEWENESYPAYEDYIVLPLFALFFPSVRFFLDRFVFEKVAKRLIFGKGYRTLDVETD 66
           + SI  +N S   +  ++ L  F+  F   RFFLD+F+F ++A   +  K      ++ +
Sbjct: 1   MASILIDNGSPSPWHFFVALS-FSFGFVVARFFLDKFIFRRLAIWFVHKKKGPLKKID-E 58

Query: 67  ERKKKIRKFKESAWKCVYFLSGEILALTVTYNEPWFTNTKYFWVGPGNQVWPDQKMKLKL 126
             +  I K  ES WK  Y+ + E   L + YNEPWFT+TK ++ G     WP+Q++K+ L
Sbjct: 59  ATQATIAKCTESMWKLTYYATVEFCVLYINYNEPWFTDTKQYFNG-----WPNQELKISL 113

Query: 127 KGVYMYAAGFYTYSIFALIFWETRRSDFGVTGSHHVAT 164
           K  YM   GFY YSI AL+ WETRR DF V  SHHV T
Sbjct: 114 KLFYMCQCGFYMYSIAALLLWETRRKDFAVMMSHHVIT 151


>30138.m003858 hypothetical protein
          Length = 64

 Score = 86.7 bits (213), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 42/60 (70%), Positives = 47/60 (78%)

Query: 1  MGFIDHVKSIEWENESYPAYEDYIVLPLFALFFPSVRFFLDRFVFEKVAKRLIFGKGYRT 60
          MG +D+VKSIEWE ESYPAYEDYIVLPLFALFFP+VRFFLDRFVF+     L     + T
Sbjct: 1  MGVLDYVKSIEWEYESYPAYEDYIVLPLFALFFPTVRFFLDRFVFQVRVDCLTLESTWMT 60