Jatropha Genome Database

JcCA0076441.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0076441.10 + phase: 0 
         (219 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29678.m000505 acetolactate synthase, putative                         210   3e-55
29929.m004506 acetolactate synthase, putative                         165   1e-41

>29678.m000505 acetolactate synthase, putative
          Length = 493

 Score =  210 bits (535), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 111/166 (66%), Positives = 118/166 (71%), Gaps = 4/166 (2%)

Query: 38  TCTTNHYHRRRKLVVSATAADNHNNXXXXXX---XXXXXXXXXXRRHTISVFVGDESGMI 94
           + +TNHY  RRK +VSATA D+H +                   RRHTISVFVGDESGMI
Sbjct: 46  STSTNHYQPRRKFIVSATA-DSHKDDTVLSSNGSVPAAATLSKVRRHTISVFVGDESGMI 104

Query: 95  NRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTXXXXXXXXXXXXXXXXXXXXXDLSS 154
           NRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGT                     DLSS
Sbjct: 105 NRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTERVLQQVVEQLQKLVNVMKVEDLSS 164

Query: 155 EPQVERELMLIKVNADPNYRAEIKWLVEIFRAKIVDISEHSVTIEV 200
           EPQVERELMLIKVNADP+YRAEI WLV IFRAKIVDISEHS+TIEV
Sbjct: 165 EPQVERELMLIKVNADPSYRAEIMWLVGIFRAKIVDISEHSLTIEV 210



 Score = 94.0 bits (232), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 50/124 (40%), Positives = 73/124 (58%), Gaps = 2/124 (1%)

Query: 79  RRHTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKAL--FTIVVSGTXXXXXXX 136
           R HT+S+ V D  G++N + G+FARRGYN++SLAVG ++ + L   T VV GT       
Sbjct: 322 RSHTLSMLVNDSPGVLNIVTGIFARRGYNVQSLAVGHSETEGLSRITTVVPGTDESISKL 381

Query: 137 XXXXXXXXXXXXXXDLSSEPQVERELMLIKVNADPNYRAEIKWLVEIFRAKIVDISEHSV 196
                         DL+  P  ERELMLIK+  +   R ++  +  IFRAK VD+S+H++
Sbjct: 382 VQQLYKLIDLHEVRDLTHLPFAERELMLIKIAVNAAARRDVLDIASIFRAKAVDVSDHTI 441

Query: 197 TIEV 200
           T+E+
Sbjct: 442 TLEL 445


>29929.m004506 acetolactate synthase, putative
          Length = 531

 Score =  165 bits (418), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 83/120 (69%), Positives = 92/120 (76%)

Query: 81  HTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTXXXXXXXXXXX 140
           HTISVFVGDESG+INRIAGVFARRG+NIESLAV LN+DKALFTIVV GT           
Sbjct: 126 HTISVFVGDESGIINRIAGVFARRGFNIESLAVCLNEDKALFTIVVRGTDNVLRQVVEQL 185

Query: 141 XXXXXXXXXXDLSSEPQVERELMLIKVNADPNYRAEIKWLVEIFRAKIVDISEHSVTIEV 200
                     D+S EPQVERELMLIK+NADP  R EI WLV+IFRAK+VDISEH++TIEV
Sbjct: 186 NKLVSVIKVEDISREPQVERELMLIKLNADPMTRHEIMWLVDIFRAKVVDISEHTLTIEV 245



 Score = 87.8 bits (216), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 2/122 (1%)

Query: 81  HTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKAL--FTIVVSGTXXXXXXXXX 138
           HT+S+ V D  G++N I GV +RRGYNI+SLAVG  + + L   T V+ GT         
Sbjct: 362 HTLSMLVNDSPGVLNMITGVISRRGYNIQSLAVGSAEREGLSRITTVIPGTNESIGKLVL 421

Query: 139 XXXXXXXXXXXXDLSSEPQVERELMLIKVNADPNYRAEIKWLVEIFRAKIVDISEHSVTI 198
                       D++  P  ERELMLIK+  +   R ++  +  IFRAK VD+S+H++T+
Sbjct: 422 QLHKLIDMHEVRDITHVPFAERELMLIKIAVNTAARRDVLDIASIFRAKAVDVSDHTITL 481

Query: 199 EV 200
           E+
Sbjct: 482 EL 483