Jatropha Genome Database

JcCA0076041.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0076041.10 - phase: 0 /partial
         (78 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29942.m000731 aspartate kinase, putative                               99   5e-22

>29942.m000731 aspartate kinase, putative
          Length = 376

 Score = 98.6 bits (244), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 50/78 (64%), Positives = 56/78 (71%)

Query: 1   MDVXXXXXXXXXXXXXXINLDNIEIESLYPDEMGPHAMSVEKFLGSGIALLDNNIQERVK 60
           MDV              INLD+I+IESLYPDEMGP  MSVE+FL  G+ LLDN+IQERVK
Sbjct: 234 MDVARKALILARLLGRRINLDSIKIESLYPDEMGPDVMSVEEFLDGGVMLLDNDIQERVK 293

Query: 61  KASLNQNVLRYVCVIEGS 78
           +ASL  NVLRYVCVIE S
Sbjct: 294 RASLKGNVLRYVCVIEDS 311