Jatropha Genome Database

JcCA0075831.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0075831.10 - phase: 0 
         (235 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m013795 nucleoside diphosphate kinase, putative                 366   e-102
29709.m001170 nucleoside diphosphate kinase, putative                 178   2e-45
30190.m010843 nucleoside diphosphate kinase, putative                 172   1e-43
32353.m000039 nucleoside diphosphate kinase, putative                  92   1e-19
29158.m000194 nucleoside diphosphate kinase, putative                  83   1e-16
30147.m014343 Nucleoside diphosphate kinase B, putative                68   4e-12

>30147.m013795 nucleoside diphosphate kinase, putative
          Length = 242

 Score =  366 bits (939), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 189/242 (78%), Positives = 200/242 (82%), Gaps = 7/242 (2%)

Query: 1   MEAVGVVGSGGLCVPASSI-------NRSSTHTTYSLSFVPGNKLGLRSSHLAAFHSPSH 53
           MEAVGV+G G  CV +SSI       + + + +T SLS+    KL LR+SHLAAFHSPS 
Sbjct: 1   MEAVGVLGGGAPCVYSSSILLRSSTDSTTYSTSTSSLSYAQCKKLNLRTSHLAAFHSPSR 60

Query: 54  LFSYSPSRPYNAKHRKPTKTHIFLPHLVASLEQVEETYIMVKPDGVQRGLVGEIISRFEX 113
           LF +S SR YNAK R  TKTHIFLPHLVASLEQVEETYIMVKPDGVQRGLVGEIISRFE 
Sbjct: 61  LFCHSHSRSYNAKSRNSTKTHIFLPHLVASLEQVEETYIMVKPDGVQRGLVGEIISRFEK 120

Query: 114 XXXXXXXXXXXQCPKELAEEHYKDLKARPFFPKLINYITSGPVVCMAWEGVGVVASARKL 173
                      QCPKELAEEHYKDLKARPFFPKLI+YITSGPVVCMAWEGVGVVASARKL
Sbjct: 121 KGFKLTGLKLFQCPKELAEEHYKDLKARPFFPKLIDYITSGPVVCMAWEGVGVVASARKL 180

Query: 174 IGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIALWFKEGEICQWTPALASWF 233
           IGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKRE+ALWFKEGEICQW PALA W 
Sbjct: 181 IGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREVALWFKEGEICQWPPALAPWL 240

Query: 234 RE 235
           RE
Sbjct: 241 RE 242


>29709.m001170 nucleoside diphosphate kinase, putative
          Length = 148

 Score =  178 bits (452), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 82/149 (55%), Positives = 103/149 (69%), Gaps = 1/149 (0%)

Query: 87  VEETYIMVKPDGVQRGLVGEIISRFEXXXXXXXXXXXXQCPKELAEEHYKDLKARPFFPK 146
           +E+T+IM+KPDGVQRGLVGEIISRFE               +  AE+HY DL A+PFF  
Sbjct: 1   MEQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKGLKLITVDRSFAEQHYADLSAKPFFSG 60

Query: 147 LINYITSGPVVCMAWEGVGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSP 206
           L++YI SGPVV M WEG  VV + R +IG+T+P Q+ PGTIRGD A+  GRNV+HGSDS 
Sbjct: 61  LVDYIISGPVVAMVWEGKNVVTTGRTIIGATNPAQSAPGTIRGDFAIDIGRNVIHGSDSV 120

Query: 207 ENGKREIALWFKEGEICQWTPALASWFRE 235
           E+ ++EIALWF EG +  W  +L  W  E
Sbjct: 121 ESARKEIALWFPEGPVS-WESSLKHWIYE 148


>30190.m010843 nucleoside diphosphate kinase, putative
          Length = 236

 Score =  172 bits (436), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 77/148 (52%), Positives = 99/148 (66%)

Query: 86  QVEETYIMVKPDGVQRGLVGEIISRFEXXXXXXXXXXXXQCPKELAEEHYKDLKARPFFP 145
           ++E T+I +KPDGVQRGL+ EI++RFE               KE A++HY DLK RPFF 
Sbjct: 85  EMERTFIAIKPDGVQRGLIAEIVARFERKGFKLVGIKVVVPSKEFAQKHYHDLKERPFFS 144

Query: 146 KLINYITSGPVVCMAWEGVGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDS 205
            L ++++SGPV+ M WEG GV+   RKLIG+TDP ++EPGTIRGDLAV  GRN++HGSD 
Sbjct: 145 GLCDFLSSGPVIAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDG 204

Query: 206 PENGKREIALWFKEGEICQWTPALASWF 233
           PE  K EI LWFK  E+  +      W 
Sbjct: 205 PETAKDEINLWFKPEELVSYASNAEKWI 232


>32353.m000039 nucleoside diphosphate kinase, putative
          Length = 139

 Score = 92.4 bits (228), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 74/136 (54%)

Query: 88  EETYIMVKPDGVQRGLVGEIISRFEXXXXXXXXXXXXQCPKELAEEHYKDLKARPFFPKL 147
           E T+ ++KPD  +R + G+I +  E               +  A++ Y+    RPF+ +L
Sbjct: 3   ERTFSIIKPDATRRNITGKINAVIEEAGLRIVAQRRVHLTEAQAKKFYEVHAERPFYGEL 62

Query: 148 INYITSGPVVCMAWEGVGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPE 207
           +  +T+ PVV    EG G VA  R+++G+T+P  A  GTIR   A+  G N VHGSDS E
Sbjct: 63  VAQMTAEPVVVQVLEGEGAVAKYREVMGATNPDNAAEGTIRKLFALSIGENSVHGSDSLE 122

Query: 208 NGKREIALWFKEGEIC 223
           N   EIA +F + +I 
Sbjct: 123 NAGIEIAQFFTDADIV 138


>29158.m000194 nucleoside diphosphate kinase, putative
          Length = 187

 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)

Query: 88  EETYIMVKPDGVQRGLVGEIISRFEXXXXXXXXXXXXQCPKELAEEH----YKDLKARPF 143
           E+T  M+KPDG    L+G    R +            +   +L E+     Y +  ++ F
Sbjct: 31  EKTLAMIKPDG----LLGNYTERIKEVILQSGFSIVTEIITQLDEDRASIFYAEHSSKSF 86

Query: 144 FPKLINYITSGPVVCMAWEGVGVVASARKLIGSTDPLQAE---PGTIRGDLAVQTGRNVV 200
           F  LI Y+TSGPV+ M  +    V+  R LIG TD  +A+   P ++R    + + RN V
Sbjct: 87  FSSLIKYMTSGPVLAMVLKKENAVSDWRTLIGPTDARKAKITHPDSVRAMCGLDSERNCV 146

Query: 201 HGSDSPENGKREIALWFKE 219
           HGSDS E+ +RE++ +F+E
Sbjct: 147 HGSDSLESAQREVSFFFRE 165


>30147.m014343 Nucleoside diphosphate kinase B, putative
          Length = 86

 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 1/70 (1%)

Query: 166 VVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIALWFKEGEICQW 225
           ++  + K++G+T P ++ PGTI GD AV+  R+++HGSDS EN ++  ALWF  G +  W
Sbjct: 18  ILNDSEKIVGATKPSESAPGTIPGDFAVEVERSIIHGSDSVENARKGKALWFPAGTV-NW 76

Query: 226 TPALASWFRE 235
             +L SW  E
Sbjct: 77  QSSLRSWIYE 86