Jatropha Genome Database

JcCA0075411.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0075411.10 + phase: 0 
         (679 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m014105 conserved hypothetical protein                         1120   0.0  
30108.m000240 conserved hypothetical protein                          473   e-133

>30147.m014105 conserved hypothetical protein
          Length = 799

 Score = 1120 bits (2898), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 542/684 (79%), Positives = 604/684 (88%), Gaps = 6/684 (0%)

Query: 1   MSQLLSAFSIPKTALKLDNLVGDIEDAVSSAMSKKLRKPSSTQNSEEMRLLAIETLRKTE 60
           +++L +  +  +TALKLD LVGDIED VSS M+K LRK SST+NSEEMR+LAIETL +TE
Sbjct: 117 VARLETVRAYAETALKLDTLVGDIEDGVSSVMNKNLRKHSSTRNSEEMRVLAIETLGETE 176

Query: 61  SFLTSITKAHPQWTHLVLAVDHRVDRALAILRPQAIADHRALLTSLGWPPPLSTLTSSNL 120
           + LT ITK  PQWTH+V AVDHRVDRALAILRPQAIADHRALL SLGWPPPLSTLTSSNL
Sbjct: 177 NVLTLITKTRPQWTHIVSAVDHRVDRALAILRPQAIADHRALLASLGWPPPLSTLTSSNL 236

Query: 121 DTGKSTEVPSPLFTMQGDLKNQYCENFLALCHLQELQRRRKSRQLEGHNTEVALHQPLWA 180
           DTGKSTEVP+PLFTMQGDLKN YCENFLALC LQEL RRRK RQLEGH  E ALHQ LWA
Sbjct: 237 DTGKSTEVPNPLFTMQGDLKNLYCENFLALCQLQELLRRRKYRQLEGHYKEAALHQSLWA 296

Query: 181 IEELVNPISVACQRHFSKWINKLEFIFALVYKITSDYVDTMDELLQPLVDEARLVGYSCR 240
           IEELVNP+S+ACQRHF KWI+K EFIF+LVYKIT DYVDTMDELLQPLVDEARLVGYSCR
Sbjct: 297 IEELVNPLSIACQRHFPKWIDKPEFIFSLVYKITKDYVDTMDELLQPLVDEARLVGYSCR 356

Query: 241 EEWISAMVTSLSTYLAKEVFTIYVGQLDEESVAGVQSQG-ISWLHLIDLMIAFDKRIQSL 299
           EEWISAMVTSLS YLAKE+F  Y  QL EESVAGVQSQ  IS LHL+DLMIAFDK+I+SL
Sbjct: 357 EEWISAMVTSLSIYLAKEIFPTYASQLGEESVAGVQSQARISLLHLVDLMIAFDKQIKSL 416

Query: 300 MSHSGIMASLQEDENLQKISSLSIFCDRPDWLDLWAEIELSDIVEKLKPEVDDDRNWTMK 359
           +SHSGIM ++Q DENLQKISSLS+F DRPDWLDLW E+ELS+ +EKLKP VDD+RNWT K
Sbjct: 417 ISHSGIMFTIQMDENLQKISSLSVFGDRPDWLDLWTELELSETLEKLKPVVDDERNWTTK 476

Query: 360 IEGTALLSGPENYKSPVVSVAFLRRISLLVDRCRSLPTISLRSRFLRLAGAPVIRRFLDF 419
           I+G A LSGPENYKSP+VS AF+  +SL+VDRCRSLP+ SLRSRFLRL GAPV++RFLD 
Sbjct: 477 IQGAAPLSGPENYKSPMVSTAFIWHLSLVVDRCRSLPSTSLRSRFLRLVGAPVLQRFLDC 536

Query: 420 ALLRCQEAEGLTALTDDDALIKVANSINAARYFESVLKEWCEDIFFLEMGFDHGDQLGIS 479
            LLRCQEAEGLTALTDDDA+IKVANS+NAARYFESVLKEWCED+FFLEMG DHGDQLGIS
Sbjct: 537 VLLRCQEAEGLTALTDDDAVIKVANSLNAARYFESVLKEWCEDLFFLEMGSDHGDQLGIS 596

Query: 480 ITNNEAREEPV----SGIFDEEIRKLEEFRKEWVEKISVVILRGFDARCRDYVKNRRQWQ 535
             + +  E P+    SGIFDEEIRKLE F+KEWVEKISVV+LRGFDAR RDY+KNRRQWQ
Sbjct: 597 TNDIDNSEAPIDGDFSGIFDEEIRKLEAFQKEWVEKISVVVLRGFDARSRDYMKNRRQWQ 656

Query: 536 EKGEEGWTVSKNLVGALDHLQGKMAIMEENLNAMDFVGVWRSLAAGVDRLLFNGVLMSNV 595
           EKGEEGWTVSKNLVGALD+LQGKM ++E++LN +DFVGVWRSLA+G+D LLFNGVL+SNV
Sbjct: 657 EKGEEGWTVSKNLVGALDYLQGKMKVVEQDLNGIDFVGVWRSLASGMDHLLFNGVLLSNV 716

Query: 596 KFHDCGIERFNNDMEVLFGVFGAWCLRPEGFFPKVSDGMKLLKMGEEQLRDNLAGGEKWL 655
           KFHD GIERF  D+EVLFGVFG WCLRPEGFFPK+SD +KLLKM EEQL D+L GGEKW+
Sbjct: 717 KFHDSGIERFGRDLEVLFGVFGTWCLRPEGFFPKISDSLKLLKMEEEQL-DSLEGGEKWM 775

Query: 656 KENGIRNLGAAEAEKIINSRVFMS 679
           KENGIR+L  AEA KI+NSRVFMS
Sbjct: 776 KENGIRHLSVAEAAKILNSRVFMS 799


>30108.m000240 conserved hypothetical protein
          Length = 829

 Score =  473 bits (1218), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 271/675 (40%), Positives = 407/675 (60%), Gaps = 59/675 (8%)

Query: 14  ALKLDNLVGDIEDAVSSA-------MSKKLRKPSSTQNS----------------EEMRL 50
           AL+L+ LVGD+EDA+ +         +K L    ST  S                +E+ L
Sbjct: 142 ALQLEALVGDLEDAIYTIGDSHAKFSAKLLTSMISTVKSAFPLPQYFGTQDFGLKQEILL 201

Query: 51  LAIETLRKTESFLTSITKAHPQWTHLVLAVDHRVDRALAILRPQAIADHRALLTSLGWPP 110
            AI+ +   E  L ++ K HP+W+HL+ +VD RVD++LA++RPQ +ADHRALL SLGWPP
Sbjct: 202 RAIKVMNNIEDILVTVVKVHPKWSHLLESVDVRVDKSLAVVRPQILADHRALLASLGWPP 261

Query: 111 PLSTLTSSNLDTGKSTEVPSPLFTMQGDLKNQYCENFLALCHLQELQRRRKSRQLEGHNT 170
            L T   S +DTG+ T  P+PL  M+GD +  Y ++FL LC LQ LQ RR+ RQ   HN 
Sbjct: 262 KLLT---SKVDTGEITSFPNPLVLMEGDKRKCYSQSFLGLCALQHLQTRREDRQ---HNI 315

Query: 171 --EVALHQPLWAIEELVNPISVACQRHFSKWINKLEFIFALVYKITSDYVDTMDELLQPL 228
             +      LWAI+ELV+PI+   + HFSKW+ + EF+FALVY+IT D++  +D++LQPL
Sbjct: 316 FGQKECTMRLWAIDELVSPIASRMEYHFSKWVEQPEFMFALVYRITRDFIVGVDDVLQPL 375

Query: 229 VDEARLVGYSCREEWISAMVTSLSTYLAKEVFTIYVGQLDEESVAGVQSQGISWLHLIDL 288
           +D ARLV YS RE W+ AMV  LS +L+K V +    +  E+  A V+    SWLHLID 
Sbjct: 376 IDRARLVSYSAREAWVLAMVQMLSEFLSKSVVSELAKRYKEKH-AKVEVAS-SWLHLIDH 433

Query: 289 MIAFDKRIQSLMSHS--GIMASLQEDENLQKISSLSIFCDRPDWLDLWAEIELSDIVEKL 346
           ++AFDKR+QSL+S      + S + DE  + +S L IFCDRPDWL +WA+IEL D  +KL
Sbjct: 434 IVAFDKRMQSLVSSEIHFFLESERHDEPSRGVSVLKIFCDRPDWLKIWAKIELKDAWKKL 493

Query: 347 KPEVDDDRNWTMKIEGTA-----------LLSGPENYKSPVVSVAFLRRISLLVDRCRSL 395
           K ++ D+  W++  +               L+  E+Y++P+V+ + ++    +++RC++L
Sbjct: 494 KLDLKDETAWSIDKKCGVNFQLSAETEQFFLATREDYRAPLVTESAIKISWEMIERCQTL 553

Query: 396 PTISLRSRFLRLAGAPVIRRFLDFALLRCQEAEGLTALTDDDALIKVANSINAARYFESV 455
           P + LR RF+R      +  FL+  +LRC+  E     + DDALIKV  SINAARY ES 
Sbjct: 554 PDVLLRVRFIRSTAGKFLWHFLNVLVLRCKNTE-FPIDSPDDALIKVCVSINAARYIESK 612

Query: 456 LKEWCEDIFFLEMGFDHGDQLGISITNNEAREEPVSGIFDEEIRKLEEFRKEWVEKISVV 515
           L+EW +D+ FLEM       L I+  +N A +   +  F EE++ + E    W+  I   
Sbjct: 613 LQEWSDDVNFLEMRIAER-ALDINRNDNGADD---NSFFREEVKSMLELETNWLMDIITC 668

Query: 516 ILRGFDARCRDYVKNRRQWQEKGEEGWT-------VSKNLVGALDHLQGKMAIMEENLNA 568
           +L  F+A   +Y++N +Q+ E+G    T       +S ++V ALD ++ ++ I++ +LN 
Sbjct: 669 LLHHFEALSWEYLQNAKQF-EQGRGNLTSAVTDLAISTDIVEALDTIKSELRILKLSLNP 727

Query: 569 MDFVGVWRSLAAGVDRLLFNGVLMSNVKFHDCGIERFNNDMEVLFGVFGAWCLRPEGFFP 628
            DF  +WRS+A G+D  + + +L+S++ F   GI +F  DM+ LF VF  +C RP+ FFP
Sbjct: 728 KDFFDLWRSVADGLDHFISSSILVSDILFSSFGINQFEADMQALFFVFQPFCARPDAFFP 787

Query: 629 KVSDGMKLLKMGEEQ 643
            + + ++LLKM  E+
Sbjct: 788 CIRETIRLLKMSREE 802