Jatropha Genome Database

JcCA0075381.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0075381.10 + phase: 0 
         (359 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29698.m000067 bacteriochlorophyll synthase, putative                  299   1e-81
27553.m000325 bacteriochlorophyll synthase, putative                  102   4e-22
29601.m000449 bacteriochlorophyll synthase, putative                   60   2e-09

>29698.m000067 bacteriochlorophyll synthase, putative
          Length = 432

 Score =  299 bits (765), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 151/294 (51%), Positives = 200/294 (68%), Gaps = 7/294 (2%)

Query: 64  NPLYQFSRPHXXX-------XXXXXXXXXXLLPVETITELSPTFFMGLLKALVPSVLMNI 116
           +  Y+FSRPH                    LL ++ +++LSP F  G+L+A+  +++MNI
Sbjct: 111 DAFYRFSRPHTVIGTVKFNISHALSIISVSLLAIQKLSDLSPLFLTGVLEAVAAALMMNI 170

Query: 117 YVVGLNQLFDIEIDKVNKPYLPLASGNFSKEIGITIVSISLFMSLGMGIMFESPPVVAAL 176
           Y+VGLNQL DIEIDKVNKPYLPLASG +S  +G+ IV+    MS  +G +  S P+  AL
Sbjct: 171 YIVGLNQLTDIEIDKVNKPYLPLASGEYSVGMGVMIVTSFSIMSFWLGWIVGSWPLFWAL 230

Query: 177 LISFVLGSVYSVELPFMRWKKQAFLAATCILIVRAIVVQLAFFAHMQKFVLGKPIVITKS 236
            ISF+LG+ YSV LP  RWK+ AF+AA CIL VRA++VQLAF+ HMQ  V  +P V ++ 
Sbjct: 231 FISFILGTAYSVNLPLFRWKRFAFVAAMCILAVRAVIVQLAFYLHMQIHVYRRPAVFSRP 290

Query: 237 LVFAVAFMCFFSAVIALFKDIPDVDGDRDFGIRSFSVSLGQERVFWLCVNMXXXXXXXXX 296
           L+FA AFM FFS VIALFKDIPD++GD+ FGIRSF+V LGQERVFW+C+++         
Sbjct: 291 LIFATAFMSFFSVVIALFKDIPDIEGDKIFGIRSFTVRLGQERVFWICISLLEIAYGVAI 350

Query: 297 XXXXSCSLGPSKLITMLGHCTLALVLWMQAQSVDLSSNNSITCFYMFIWKLFYA 350
               + S   SK IT+LGH  LAL+LW +A+SVDL S  +IT  YMFIWK+ ++
Sbjct: 351 LVGAASSYTWSKCITVLGHVILALMLWNRAKSVDLKSKAAITSCYMFIWKVMHS 404


>27553.m000325 bacteriochlorophyll synthase, putative
          Length = 373

 Score =  102 bits (253), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 105/188 (55%), Gaps = 8/188 (4%)

Query: 104 LLKA---LVPSVLMNIYVVGLNQLFDIEIDKVNKPYLPLASGNFSKEIG-ITIVSISLFM 159
           LLKA   L   +  N Y+VG+NQ++DI IDKVNKPYLP+A+G+ S +   + ++  S+  
Sbjct: 142 LLKAVSGLFALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWLLVIFFSVTG 201

Query: 160 SLGMGIMFESPPVVAALLISFVLGSVYSVELPFMRWKKQAFLAATCILIVRAIVVQLAFF 219
            L +G+ F  P + +   +   LG++YS+  P  R K+ A  A   I +VR  ++    +
Sbjct: 202 ILMVGLNF-GPFITSLYCLGLFLGTIYSI--PPFRMKRFAVAAFLIIAMVRGFLLNFGVY 258

Query: 220 AHMQKFVLGKPIVITKSLVFAVAFMCFFSAVIALFKDIPDVDGDRDFGIRSFSVSLGQER 279
            H  +  LG     +  + F   F+  F+ VIA+ KD+PDV+GDR + I + + SLG   
Sbjct: 259 -HATRAALGLSFEWSSPVAFITTFVTLFALVIAITKDLPDVEGDRKYKISTLATSLGVRN 317

Query: 280 VFWLCVNM 287
           + +L   +
Sbjct: 318 IAFLGTGL 325


>29601.m000449 bacteriochlorophyll synthase, putative
          Length = 344

 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 16/176 (9%)

Query: 117 YVVGLNQLFDIEIDKVNKPYLPLASGNFSKEIGITIVSISLFMSLGMGIMFES------P 170
           Y   +N  +D EID +N+PY P+ SG  S+   IT + + L   LG+G + +       P
Sbjct: 107 YTQTINDYYDREIDAINEPYRPIPSGAISESEVITQIWVLLLGGLGLGGLLDVWAGHDFP 166

Query: 171 PVVAALLISFVLGSVYSVELPFMRWKKQAFLAATCILIVRAIVVQLAFFAHMQKFVLGKP 230
            V    L   +L  +YS   P ++ K+  ++       + A  + L ++A    F    P
Sbjct: 167 IVFYLALGGSLLSYIYSA--PPLKLKQNGWIGN---FALGASYISLPWWAGQALFGTLTP 221

Query: 231 IVITKSLVFAVAFMCFFSAVIALFKDIPDVDGDRDFGIRSFSVSLGQERVFWLCVN 286
            +I  +L++++A +      IA+  D   ++GDR  G++S  V+ G E   W+CV 
Sbjct: 222 DIIVLTLLYSIAGLG-----IAIVNDFKSIEGDRAMGLQSLPVAFGAETAKWICVG 272