Jatropha Genome Database

JcCA0074951.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0074951.10 + phase: 2 /pseudo
         (151 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27524.m000291 conserved hypothetical protein                          127   2e-30
30066.m000747 conserved hypothetical protein                           57   3e-09
28108.m000145 conserved hypothetical protein                           53   6e-08

>27524.m000291 conserved hypothetical protein
          Length = 190

 Score =  127 bits (319), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 61/81 (75%), Positives = 65/81 (80%)

Query: 70  EACLLAGATKNAYHTKYRGMIYAQNFSCETLRKXXXXXXXXXXXXTMILNVYYYMYFSKA 129
           EACL+AGATKNAYHTKYRGMIYAQNFSCE+LRK            TM+LNVYYYMYFSKA
Sbjct: 109 EACLIAGATKNAYHTKYRGMIYAQNFSCESLRKGVFIAGAVFVVATMVLNVYYYMYFSKA 168

Query: 130 TAPQAASKANRTSSNVGMAGY 150
           TAPQ A KA RTSS+VGM GY
Sbjct: 169 TAPQTAHKAKRTSSSVGMTGY 189


>30066.m000747 conserved hypothetical protein
          Length = 140

 Score = 57.4 bits (137), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 37/60 (61%)

Query: 70  EACLLAGATKNAYHTKYRGMIYAQNFSCETLRKXXXXXXXXXXXXTMILNVYYYMYFSKA 129
           EACLLAG+ +NAYHTKYRG+   ++ SC T+RK            +M+ ++ YY   S+A
Sbjct: 45  EACLLAGSARNAYHTKYRGIYGGEHLSCTTIRKGVFAAGAALTLLSMLGSILYYWSHSRA 104


>28108.m000145 conserved hypothetical protein
          Length = 184

 Score = 52.8 bits (125), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 35/60 (58%)

Query: 70  EACLLAGATKNAYHTKYRGMIYAQNFSCETLRKXXXXXXXXXXXXTMILNVYYYMYFSKA 129
           E CLLAG+ +NAYHTKYR +       C+ LRK            T+I++ +YY+ +SKA
Sbjct: 106 EVCLLAGSVRNAYHTKYRTVFSDNPPDCQMLRKGVFGAGAAFSLFTLIVSQFYYVCYSKA 165