Jatropha Genome Database

JcCA0074421.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0074421.20 - phase: 0 /partial
         (131 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29784.m000362 aconitase, putative                                     214   7e-57
29600.m000550 aconitase, putative                                     201   6e-53
27777.m000279 aconitase, putative                                     198   6e-52

>29784.m000362 aconitase, putative
          Length = 900

 Score =  214 bits (546), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 101/112 (90%), Positives = 106/112 (94%)

Query: 20  AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKTGEDADTLGLTGHERYSIDLPNSV 79
           AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFK GEDA+T GLTGHERY+IDLP+SV
Sbjct: 789 AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETFGLTGHERYNIDLPSSV 848

Query: 80  SEIRPGQDVKVLTDNGKSFTCTLRFDTEVELAYFDHGGILQYVIRNLIHAKH 131
           +EIRPGQDV V TDNGKSFTCTLRFDTEVELAYFDHGGIL +VIRNLI AKH
Sbjct: 849 AEIRPGQDVTVTTDNGKSFTCTLRFDTEVELAYFDHGGILPFVIRNLIQAKH 900


>29600.m000550 aconitase, putative
          Length = 997

 Score =  201 bits (512), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 93/111 (83%), Positives = 103/111 (92%)

Query: 20  AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKTGEDADTLGLTGHERYSIDLPNSV 79
           AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFK G+DADTLGL+GHERY+IDLP+++
Sbjct: 887 AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGQDADTLGLSGHERYTIDLPSNI 946

Query: 80  SEIRPGQDVKVLTDNGKSFTCTLRFDTEVELAYFDHGGILQYVIRNLIHAK 130
           SEI+PGQDV V TDNGKSFTCT RFDTEVEL YF+HGGIL YVIRNL+  +
Sbjct: 947 SEIKPGQDVTVTTDNGKSFTCTARFDTEVELEYFNHGGILPYVIRNLMKTE 997


>27777.m000279 aconitase, putative
          Length = 997

 Score =  198 bits (503), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 93/107 (86%), Positives = 98/107 (91%)

Query: 20  AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKTGEDADTLGLTGHERYSIDLPNSV 79
           AKGPMLLGVKAVIAKSFERIHR NLVGMGIIPLCFK GEDADTLGLTGHERY+IDLP+ +
Sbjct: 888 AKGPMLLGVKAVIAKSFERIHRGNLVGMGIIPLCFKPGEDADTLGLTGHERYTIDLPDKI 947

Query: 80  SEIRPGQDVKVLTDNGKSFTCTLRFDTEVELAYFDHGGILQYVIRNL 126
           SEIRPGQ+V V TD GKSF C +RFDTEVELAYFDHGGIL YVIRNL
Sbjct: 948 SEIRPGQEVGVKTDTGKSFACRVRFDTEVELAYFDHGGILPYVIRNL 994