Jatropha Genome Database

JcCA0074421.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0074421.10 + phase: 1 /pseudo/partial
         (124 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29784.m000363 prolyl 4-hydroxylase alpha subunit, putative             97   2e-21
30170.m014285 prolyl 4-hydroxylase alpha subunit, putative             87   2e-18
29822.m003440 prolyl 4-hydroxylase alpha subunit, putative             70   2e-13
29726.m003953 prolyl 4-hydroxylase alpha subunit, putative             66   3e-12
29888.m000316 prolyl 4-hydroxylase alpha subunit, putative             62   5e-11
32128.m000014 prolyl 4-hydroxylase alpha subunit, putative             53   3e-08
28152.m000892 prolyl 4-hydroxylase alpha subunit, putative             49   4e-07
29172.m000217 prolyl 4-hydroxylase alpha subunit, putative             46   4e-06

>29784.m000363 prolyl 4-hydroxylase alpha subunit, putative
          Length = 287

 Score = 97.4 bits (241), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 41/43 (95%), Positives = 43/43 (100%)

Query: 1   HGEGLQVLHYEVGQKYEPHFDYFNDEFNTRNGGQRIATLLMYL 43
           HGEGLQVLHYEVGQKYEPHFDYFNDEFNT+NGGQR+ATLLMYL
Sbjct: 159 HGEGLQVLHYEVGQKYEPHFDYFNDEFNTKNGGQRVATLLMYL 201


>30170.m014285 prolyl 4-hydroxylase alpha subunit, putative
          Length = 289

 Score = 87.4 bits (215), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 38/43 (88%), Positives = 40/43 (93%)

Query: 1   HGEGLQVLHYEVGQKYEPHFDYFNDEFNTRNGGQRIATLLMYL 43
           HGEGLQVLHYEVGQKYE H+DYF DEFNT+NGGQR ATLLMYL
Sbjct: 161 HGEGLQVLHYEVGQKYEAHYDYFLDEFNTKNGGQRTATLLMYL 203


>29822.m003440 prolyl 4-hydroxylase alpha subunit, putative
          Length = 311

 Score = 70.1 bits (170), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 29/43 (67%), Positives = 36/43 (83%)

Query: 1   HGEGLQVLHYEVGQKYEPHFDYFNDEFNTRNGGQRIATLLMYL 43
           +GE +Q+LHYE GQKYEPHFDYF+D+ N   GG R+AT+LMYL
Sbjct: 132 NGESMQILHYEHGQKYEPHFDYFHDKANQELGGHRVATVLMYL 174


>29726.m003953 prolyl 4-hydroxylase alpha subunit, putative
          Length = 297

 Score = 66.2 bits (160), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 1   HGEGLQVLHYEVGQKYEPHFDYFNDEFNTRNGGQRIATLLMYL 43
           +GE LQVL YE GQKY+PH+DYF D+ N   GG R+AT+LMYL
Sbjct: 119 NGEDLQVLRYEHGQKYDPHYDYFADKINIARGGHRMATVLMYL 161


>29888.m000316 prolyl 4-hydroxylase alpha subunit, putative
          Length = 165

 Score = 62.4 bits (150), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 27/43 (62%), Positives = 33/43 (76%)

Query: 1  HGEGLQVLHYEVGQKYEPHFDYFNDEFNTRNGGQRIATLLMYL 43
          +GE +QVL YE  Q Y PH DYF+D FN + GGQR+AT+LMYL
Sbjct: 44 NGELVQVLRYEKSQFYRPHHDYFSDTFNLKRGGQRVATMLMYL 86


>32128.m000014 prolyl 4-hydroxylase alpha subunit, putative
          Length = 318

 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 5/48 (10%)

Query: 1   HGEGLQVLHYEVGQKYEPHFDYFNDE-----FNTRNGGQRIATLLMYL 43
           H E LQ+L+Y +G +Y PHFDYF  +         +GGQRIAT++MYL
Sbjct: 202 HAEPLQILNYGLGGEYLPHFDYFEPQQPGLPSPLESGGQRIATVVMYL 249


>28152.m000892 prolyl 4-hydroxylase alpha subunit, putative
          Length = 286

 Score = 49.3 bits (116), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 20/43 (46%), Positives = 27/43 (62%)

Query: 1   HGEGLQVLHYEVGQKYEPHFDYFNDEFNTRNGGQRIATLLMYL 43
           HGE   +L YE+GQKY+ H+D FN         QR+A+ L+YL
Sbjct: 162 HGEAFNILRYEIGQKYDSHYDSFNPAEYGPQMSQRVASFLLYL 204


>29172.m000217 prolyl 4-hydroxylase alpha subunit, putative
          Length = 290

 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 26/43 (60%)

Query: 1   HGEGLQVLHYEVGQKYEPHFDYFNDEFNTRNGGQRIATLLMYL 43
           +GE   +L YE+GQKY  H+D FN         QR+A+ L+YL
Sbjct: 166 NGEAFNILRYEIGQKYNSHYDAFNPAEYGPQKSQRVASFLLYL 208