Jatropha Genome Database

JcCA0074011.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0074011.10 - phase: 0 /pseudo
         (768 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30040.m000267 conserved hypothetical protein                         1243   0.0  
30131.m006948 conserved hypothetical protein                          316   3e-86

>30040.m000267 conserved hypothetical protein
          Length = 1020

 Score = 1243 bits (3216), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/744 (83%), Positives = 649/744 (87%), Gaps = 23/744 (3%)

Query: 2   APINNSHPDGGDGGNDATEVRFSEFCKTGLCLDEDTCKEALQLFKETKHLLSANISSIGN 61
           A   N H DG  G ND  EVRF++FCK GL + ED  +EA++LFK TKHLL ANIS+IGN
Sbjct: 9   ASTKNLHHDGV-GENDTIEVRFTDFCKIGLSVSEDAYEEAIKLFKGTKHLLLANISAIGN 67

Query: 62  G-----------------TRLSEKXXXXXXXXXXXXGLTLCQILRCAKLNIVDFFKELPQ 104
           G                  RLSEK            GLTLCQILR AKLNIVDFFKELPQ
Sbjct: 68  GMPEEAERFWFAFVSYSVKRLSEKIRDNMQQRPDDNGLTLCQILRRAKLNIVDFFKELPQ 127

Query: 105 YVVKAGPILSNMYGADWENRLEAKELQANFVHLSILSRHYKRAYRELFLTSDANVDKQSA 164
           YVVKAGPILS MYG DWENRLEAKELQANFVHLSILSRHYKRAYRELFLTSDANVDKQSA
Sbjct: 128 YVVKAGPILSTMYGVDWENRLEAKELQANFVHLSILSRHYKRAYRELFLTSDANVDKQSA 187

Query: 165 VSSETAYLSEYHRFGWLLFLALRVHAFSRFKDLVTCTNGLVSVLAVLMIHVPVHCRNFNL 224
               TAY+S+YHRFGWLLFLALRVHAFSRFKDLVTCTNGLVSVLA+L+IHVPV  RNFNL
Sbjct: 188 ----TAYMSDYHRFGWLLFLALRVHAFSRFKDLVTCTNGLVSVLAILIIHVPVRFRNFNL 243

Query: 225 NDSQWFVKKGDKGVDLLASLCNKYDTSEDELRKTMEKTNNLIADLLKKKPRLAPECKNEN 284
           NDSQ FVKKGDKGVDLLASLCNKYDTSEDELRKTMEKTNNLIAD+LKKKP +A E KNEN
Sbjct: 244 NDSQRFVKKGDKGVDLLASLCNKYDTSEDELRKTMEKTNNLIADILKKKPHMASEYKNEN 303

Query: 285 LDDINPDGLIYYEDLMEESSLQTSLSILEKDYDDAIRCKGELDERVFINDEDXXXXXXXX 344
           LD+IN DGLIYYEDLMEESSL++SL ILEKDY+DAIRCKGELDERVFIN+ED        
Sbjct: 304 LDNINTDGLIYYEDLMEESSLRSSLDILEKDYEDAIRCKGELDERVFINEEDSLLGSGSL 363

Query: 345 XXXAINVTGTKRKFDQMSSPTKTITSPLSCHQSPASHANGIFGSTNPKMAATPVSTAMTT 404
              AI+VTGTKRKFDQ+SSPTKTITSPLS H+SPASH NGI GSTN +MAATPVSTAMTT
Sbjct: 364 SGGAISVTGTKRKFDQISSPTKTITSPLSPHRSPASHTNGILGSTNSRMAATPVSTAMTT 423

Query: 405 AKWLRTVISPLPSKPSAQLERFLASCDRDVTNDVIRRAQIMLEAIFPSSALGERCVTGSL 464
           AKWLRTVISPLPSKPS QLERFLASCDRDVTNDVIRRA I+LEAIFPS+ALGERCVTGSL
Sbjct: 424 AKWLRTVISPLPSKPSPQLERFLASCDRDVTNDVIRRAHIILEAIFPSNALGERCVTGSL 483

Query: 465 QSTKLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQILHATNLTSLLTNERFHRCMLACSA 524
           QST LMDNIWAEQRRLEALKLYYRVLEAMCTAEAQILHATNLTSLLTNERFHRCMLACSA
Sbjct: 484 QSTNLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQILHATNLTSLLTNERFHRCMLACSA 543

Query: 525 ELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLES 584
           ELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLES
Sbjct: 544 ELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLES 603

Query: 585 MVWEKGSSMYNSLTVARPSLSAEINRLGLLAEPMPSLDAIAMHINFXXXXXXXXXXXQKH 644
           MVWEKGSSMYNSLTVARPSLSAEINRLGLLAEPMPSLDAIA+HINF            KH
Sbjct: 604 MVWEKGSSMYNSLTVARPSLSAEINRLGLLAEPMPSLDAIAVHINFSSGGLPPLSSVSKH 663

Query: 645 ELCPGQNGDIRSPKRPCPDYRSVLVERNSFTSPVKDRLLAFSNLKSKL-PPPLQSAFASP 703
           E+ PGQNGDIRSPKRPC DYRSVLVERNSFTSPVKDRLLAF+NLKSKL PPPLQSAFASP
Sbjct: 664 EISPGQNGDIRSPKRPCTDYRSVLVERNSFTSPVKDRLLAFTNLKSKLPPPPLQSAFASP 723

Query: 704 TRPNPGGGGETCAETGINVFFSKV 727
           TRPNPGGGGETCAETGIN+FFSK+
Sbjct: 724 TRPNPGGGGETCAETGINIFFSKI 747


>30131.m006948 conserved hypothetical protein
          Length = 612

 Score =  316 bits (809), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 183/380 (48%), Positives = 238/380 (62%), Gaps = 32/380 (8%)

Query: 350 NVTGTKRKFDQMSSPTKTITSPLSCHQSPASHANGIFGSTNPKMAATPVSTAMTTAKWLR 409
           ++   KRK  +    T+   +      SPASHA G           + +  A  T KWL 
Sbjct: 22  DIKAVKRKIGE----TEFTEAAFPVLHSPASHATG----------RSVLVGAQVTRKWLE 67

Query: 410 TVISPLPSKPSAQLERFLA-SCDRDVTNDVIRRAQIMLEAIFPSSALGERCVTGSLQSTK 468
           TVISPLPSKPSA+LER L    D+ + ++V+ RA ++L A+FP     +R    SLQ   
Sbjct: 68  TVISPLPSKPSAELERMLGIHDDKSILDEVMTRANVVLSALFP-----KRQTVSSLQDVN 122

Query: 469 LMDNIWAEQRRLEALKLYYRVLEAMCTAEAQILHATN-LTSLLTNERFHRCMLACSAELV 527
           LM+++W+EQRR EALKLYYRVLE++C +EA   + ++ L+ LL+NERFHRC+LACSAELV
Sbjct: 123 LMESMWSEQRRSEALKLYYRVLESVCQSEAGKSNTSDHLSGLLSNERFHRCLLACSAELV 182

Query: 528 LATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVW 587
            A      ML   + ERTG+TAFDLSKVIESFI HE +LPRELRRHLNS+EE+LLE  VW
Sbjct: 183 SAAQTGTGMLLSVIFERTGVTAFDLSKVIESFIIHEPTLPRELRRHLNSMEEQLLERRVW 242

Query: 588 EKGSSMYNSLTVARPSLSAEINRLGLLAEPMPSLDAIAMHINFXXXXXXXXXXXQKHELC 647
           EKGSS+YNSL VARP+LS EIN L LLA+PMPSL+ ++                QKH+L 
Sbjct: 243 EKGSSLYNSLVVARPALSDEINSLQLLAQPMPSLETVSPTY---FGGLLCSTILQKHKLS 299

Query: 648 PGQNGDIRSPKRPCPDYRSVLVERNSFTSPVKDRLLAFSNLKSKLPPPLQSAFASPTRPN 707
             Q+    SPKRPC ++  V+++ NS   P  D   AFS  ++K  P      ASP+  +
Sbjct: 300 QAQDRGTISPKRPCTEHADVVLKHNSTYCPKTDCPTAFSTPQTKQTP------ASPS--S 351

Query: 708 PGGGGETCAETGINVFFSKV 727
                 TC++T INV FSK+
Sbjct: 352 SLQNIPTCSDTAINVLFSKM 371