Jatropha Genome Database

JcCA0071331.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0071331.20 - phase: 0 /partial
         (76 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30182.m000131 Ribose-phosphate pyrophosphokinase, putative            142   3e-35
27504.m000631 Ribose-phosphate pyrophosphokinase, putative            117   1e-27

>30182.m000131 Ribose-phosphate pyrophosphokinase, putative
          Length = 326

 Score =  142 bits (359), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 69/75 (92%), Positives = 71/75 (94%)

Query: 1   KVLAAHGAAKVSAYVTHGVFPNRSWERFTQKSDGSGSAFAYFWITDSCPLTVKSIANKPP 60
           KVLAAHGAAKVSAYVTHGVFP RSWERFT KS+GS SAFAYFWITDSCPLTVK+IANK P
Sbjct: 251 KVLAAHGAAKVSAYVTHGVFPKRSWERFTHKSNGSESAFAYFWITDSCPLTVKAIANKAP 310

Query: 61  FEVLSLAGSIADALQ 75
           FEVLSLAGSIADALQ
Sbjct: 311 FEVLSLAGSIADALQ 325


>27504.m000631 Ribose-phosphate pyrophosphokinase, putative
          Length = 407

 Score =  117 bits (293), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 55/77 (71%), Positives = 62/77 (80%), Gaps = 1/77 (1%)

Query: 1   KVLAAHGAAKVSAYVTHGVFPNRSWERFTQKSDGS-GSAFAYFWITDSCPLTVKSIANKP 59
           KVLA HGAA++SAYVTHG+FPNRSWERF   + G  G+   YFWITDSCP TV+ + NKP
Sbjct: 331 KVLADHGAARISAYVTHGIFPNRSWERFEFDNGGHPGNGLTYFWITDSCPSTVREVMNKP 390

Query: 60  PFEVLSLAGSIADALQI 76
           PFEVLSLA SIA ALQI
Sbjct: 391 PFEVLSLASSIAAALQI 407