Jatropha Genome Database

JcCA0068161.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0068161.10 + phase: 0 /pseudo/partial
         (291 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29986.m001664 aspartate ammonia lyase, putative                       529   e-151

>29986.m001664 aspartate ammonia lyase, putative
          Length = 470

 Score =  529 bits (1362), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 249/276 (90%), Positives = 258/276 (93%)

Query: 1   MATGVVARRLXXXXXXXXXXXXLRFASWRLYSTAFREERDTFGPIQVPSDKLWGAQTQRS 60
           MA G +ARR+            LR+ASWRLYSTAFREERDTFGPIQVP+DKLWGAQTQRS
Sbjct: 1   MAMGTIARRISRESTTTRAVGSLRYASWRLYSTAFREERDTFGPIQVPNDKLWGAQTQRS 60

Query: 61  LQNFEIGGEREQMPEPIIRAFGILKKCAAKVNMEYGLDPSIGKAIMQAAQEVAEGKLNDH 120
           LQNFEIGGERE+MPEPIIRAFGILKKCAAKVNMEYGLDPSIGKAIMQAAQEVAEGKLNDH
Sbjct: 61  LQNFEIGGERERMPEPIIRAFGILKKCAAKVNMEYGLDPSIGKAIMQAAQEVAEGKLNDH 120

Query: 121 FPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGGKFVHPNDHVNRSQSSNDTFPTVMH 180
           FPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRG K+VHPNDHVNRSQSSNDTFPTVMH
Sbjct: 121 FPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKYVHPNDHVNRSQSSNDTFPTVMH 180

Query: 181 IAAATEINSRLIPNLKNLHTTLHSKSIEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVK 240
           IAAATEIN RLIPNL+NL TTLH+KS+EFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVK
Sbjct: 181 IAAATEINKRLIPNLRNLQTTLHAKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVK 240

Query: 241 YGIDRIMCTLPRMYQLAQGGTAVGTGLNTKKGFDVK 276
           YGIDRIM TLPRMYQLAQGGTAVGTGLNTKKGFDVK
Sbjct: 241 YGIDRIMVTLPRMYQLAQGGTAVGTGLNTKKGFDVK 276