Jatropha Genome Database

JcCA0066941.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0066941.10 + phase: 0 /partial
         (189 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28153.m000279 conserved hypothetical protein                          367   e-102
29726.m003904 conserved hypothetical protein                          347   2e-96
30099.m001641 conserved hypothetical protein                          244   2e-65
29825.m000327 Magnesium and cobalt efflux protein corC, putative      240   2e-64
30170.m014038 conserved hypothetical protein                          229   7e-61
30169.m006589 conserved hypothetical protein                          220   3e-58
30169.m006588 conserved hypothetical protein                          205   1e-53

>28153.m000279 conserved hypothetical protein
          Length = 477

 Score =  367 bits (943), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 178/189 (94%), Positives = 183/189 (96%)

Query: 1   SLGLVELEILQRSGSSTEKKQAAVIIPVVQKQHQLLVTLLLCNACAMEALPICLDKIFHP 60
           SLGLVELEILQRSGS TEKKQAA I+PVVQKQHQLLVTLLLCNACAMEALPI LDKIFHP
Sbjct: 59  SLGLVELEILQRSGSFTEKKQAATILPVVQKQHQLLVTLLLCNACAMEALPIYLDKIFHP 118

Query: 61  FVAVLLSVTFVLAFGEVIPQAICSRYGLFVGANFVWLVRILMIICYPIAYPIGKILDAAL 120
           FVAV+LSVTFVLAFGE+IPQAICSRYGL+VGAN VWLVRILM ICYPIAYPIGK+LDAAL
Sbjct: 119 FVAVVLSVTFVLAFGEIIPQAICSRYGLYVGANLVWLVRILMFICYPIAYPIGKVLDAAL 178

Query: 121 GHSDALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFS 180
           GH DALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFS
Sbjct: 179 GHDDALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFS 238

Query: 181 LDVNSKLDW 189
           LDVNSKLDW
Sbjct: 239 LDVNSKLDW 247


>29726.m003904 conserved hypothetical protein
          Length = 502

 Score =  347 bits (889), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 167/189 (88%), Positives = 179/189 (94%)

Query: 1   SLGLVELEILQRSGSSTEKKQAAVIIPVVQKQHQLLVTLLLCNACAMEALPICLDKIFHP 60
           SLGLVELEILQRSG+S+EKKQAA I+PVVQKQHQLLVTLLLCNA AMEALPI LDK+F+ 
Sbjct: 59  SLGLVELEILQRSGTSSEKKQAAAILPVVQKQHQLLVTLLLCNAAAMEALPIYLDKLFNQ 118

Query: 61  FVAVLLSVTFVLAFGEVIPQAICSRYGLFVGANFVWLVRILMIICYPIAYPIGKILDAAL 120
           +VA++LSVTFVL FGEVIPQ+ICSRYGL VGANFVWLVRILMIICYPI+YPIGKILD  L
Sbjct: 119 YVAIILSVTFVLFFGEVIPQSICSRYGLAVGANFVWLVRILMIICYPISYPIGKILDWVL 178

Query: 121 GHSDALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFS 180
           GH++ALFRRAQLK LVSIH QEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFS
Sbjct: 179 GHNEALFRRAQLKVLVSIHSQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFS 238

Query: 181 LDVNSKLDW 189
           LDVNSKLDW
Sbjct: 239 LDVNSKLDW 247


>30099.m001641 conserved hypothetical protein
          Length = 425

 Score =  244 bits (622), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 117/189 (61%), Positives = 152/189 (80%), Gaps = 1/189 (0%)

Query: 1   SLGLVELEILQRSGSSTEKKQAAVIIPVVQKQHQLLVTLLLCNACAMEALPICLDKIFHP 60
           S+ +V+LE+L +SG+  ++K AA I+PVV+ QH LL TLL+CNA AME LPI LD +   
Sbjct: 38  SMSIVDLEVLAQSGTPKDRKHAAKILPVVRNQHLLLCTLLICNAAAMETLPIFLDGLVTA 97

Query: 61  FVAVLLSVTFVLAFGEVIPQAICSRYGLFVGANFVWLVRILMIICYPIAYPIGKILDAAL 120
           + A+L+SVT +L FGE+IPQ++CSR+GL +GA    +VRIL+ IC+P+AYPI K+LD  L
Sbjct: 98  WGAILISVTLILLFGEIIPQSVCSRHGLAIGATVAPVVRILVWICFPVAYPISKLLDYLL 157

Query: 121 GHSD-ALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTF 179
           GH   ALFRRA+LK LV+ HG EAGKGGELTHDETTII+GAL+LTEKTA +AMTPI  TF
Sbjct: 158 GHGHVALFRRAELKTLVNFHGNEAGKGGELTHDETTIIAGALELTEKTASDAMTPISETF 217

Query: 180 SLDVNSKLD 188
           ++D+N+KLD
Sbjct: 218 AIDINAKLD 226


>29825.m000327 Magnesium and cobalt efflux protein corC, putative
          Length = 429

 Score =  240 bits (613), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 115/189 (60%), Positives = 151/189 (79%), Gaps = 1/189 (0%)

Query: 1   SLGLVELEILQRSGSSTEKKQAAVIIPVVQKQHQLLVTLLLCNACAMEALPICLDKIFHP 60
           S+ LV+LE+L +SG+ +++K A  I+PVV++QH LL TLL+CNA AME LPI LD +   
Sbjct: 38  SMSLVDLEVLAKSGTPSDRKHATKILPVVKRQHLLLCTLLICNAAAMETLPIFLDGLITA 97

Query: 61  FVAVLLSVTFVLAFGEVIPQAICSRYGLFVGANFVWLVRILMIICYPIAYPIGKILDAAL 120
           + A+L+SVT +L FGE++PQA+CSRYGL +GA    +VR+L+ IC+PIAYPI K+LD  L
Sbjct: 98  WGAILISVTLILLFGEILPQAVCSRYGLAIGAAVAPIVRVLVCICFPIAYPISKLLDYLL 157

Query: 121 G-HSDALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTF 179
           G   + LFRRA+LK LV +HG EAGKGGELT DET II+GAL+LTEKTA++AMTPI  TF
Sbjct: 158 GDEHEPLFRRAELKTLVDLHGNEAGKGGELTRDETMIIAGALELTEKTAKDAMTPISETF 217

Query: 180 SLDVNSKLD 188
           S+D+N+KLD
Sbjct: 218 SIDINAKLD 226


>30170.m014038 conserved hypothetical protein
          Length = 428

 Score =  229 bits (583), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 110/189 (58%), Positives = 148/189 (78%), Gaps = 1/189 (0%)

Query: 1   SLGLVELEILQRSGSSTEKKQAAVIIPVVQKQHQLLVTLLLCNACAMEALPICLDKIFHP 60
           SLGLV+LE+L++SG   ++  A+ I+PVV+ QH LL TLL+ N+ AMEALPI LDKI  P
Sbjct: 38  SLGLVDLEVLKKSGRPQDRIYASKILPVVKNQHLLLCTLLMGNSLAMEALPIFLDKIVPP 97

Query: 61  FVAVLLSVTFVLAFGEVIPQAICSRYGLFVGANFVWLVRILMIICYPIAYPIGKILDAAL 120
           + A+L+SVT +L FGE++PQA+C+RYGL VGA     VR+L+++ +P++YPI K+LD  L
Sbjct: 98  WAAILISVTLILMFGEILPQAVCTRYGLKVGATMAPFVRLLVMLFFPVSYPISKVLDWML 157

Query: 121 GHSDA-LFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTF 179
           G   A L RRA+LK  V+ HG EA KGG+LTHDETTII+GAL+LTEKTA++AMTPI   F
Sbjct: 158 GKGHAVLLRRAELKTFVNFHGNEAQKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAF 217

Query: 180 SLDVNSKLD 188
           SLD+++ L+
Sbjct: 218 SLDLDATLN 226


>30169.m006589 conserved hypothetical protein
          Length = 510

 Score =  220 bits (560), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 115/190 (60%), Positives = 150/190 (78%), Gaps = 3/190 (1%)

Query: 1   SLGLVELEILQRSGSSTEKKQAAVIIPVVQKQHQLLVTLLLCNACAMEALPICLDKIFHP 60
           SL LV+LE+L ++G   E+K A  I+P+V+ QH LL TLL+ NA AMEALPI +D +   
Sbjct: 39  SLSLVDLEVLIKAGQPQERKHAEKILPIVKNQHLLLCTLLIGNALAMEALPIFVDALLPA 98

Query: 61  FVAVLLSVTFVLAFGEVIPQAICSRYGLFVGANFVWLVRILMIICYPIAYPIGKILDAAL 120
           + A+L+SVT +LAFGE+IPQA+CSRYGL VGA    +VR+++++ +P+AYPI K+LD  L
Sbjct: 99  WGAILISVTLILAFGEIIPQAVCSRYGLSVGAKMSVVVRLIVVVLFPLAYPISKLLDWIL 158

Query: 121 G--HSDALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIEST 178
           G  HS AL RRA+LK LV + G EAGKGGELTHDETTII+GALD+T+KTA++AMTP+   
Sbjct: 159 GKKHS-ALLRRAELKTLVDMLGSEAGKGGELTHDETTIITGALDMTQKTAKDAMTPLSKV 217

Query: 179 FSLDVNSKLD 188
           FSLD+NSKLD
Sbjct: 218 FSLDINSKLD 227


>30169.m006588 conserved hypothetical protein
          Length = 517

 Score =  205 bits (521), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 112/186 (60%), Positives = 145/186 (77%), Gaps = 3/186 (1%)

Query: 5   VELEILQRSGSSTEKKQAAVIIPVVQKQHQLLVTLLLCNACAMEALPICLDKIFHPFVAV 64
           V+LE+L ++G   ++K AA I+P+V+ +H LL TLL+  + AMEALPI LD I   + A+
Sbjct: 40  VDLEVLIKAGKPQDRKNAAKILPIVRNEHLLLCTLLIVKSLAMEALPIFLDTILPAWAAI 99

Query: 65  LLSVTFVLAFGEVIPQAICSRYGLFVGANFVWLVRILMIICYPIAYPIGKILDAAL--GH 122
           ++SVT VLAF E+IPQA+CSR+GL +GAN   LVR+L++  YP+AYPI K+LD  L  GH
Sbjct: 100 IMSVTLVLAFTEIIPQAVCSRHGLSLGANLSPLVRLLLLSLYPLAYPISKLLDWLLGKGH 159

Query: 123 SDALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLD 182
           S AL RRA+LK LV +H  EAGKGG+L+H ETTIISGALDLT+KTA++AMTPI  TF LD
Sbjct: 160 S-ALLRRAELKTLVDLHANEAGKGGDLSHHETTIISGALDLTQKTAKDAMTPISETFCLD 218

Query: 183 VNSKLD 188
           +NSKLD
Sbjct: 219 INSKLD 224