Jatropha Genome Database

JcCA0064141.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0064141.10 - phase: 0 /pseudo/partial
         (261 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28725.m000318 phosphomethylpyrimidine kinase, putative                396   e-111
32977.m000014 phosphomethylpyrimidine kinase, putative                 92   2e-19

>28725.m000318 phosphomethylpyrimidine kinase, putative
          Length = 546

 Score =  396 bits (1017), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 207/269 (76%), Positives = 223/269 (82%), Gaps = 16/269 (5%)

Query: 1   MAMEGNGAPASNDASKAKIPHVLTVAGSDSGAGAGIQADLKTCAARGVFCSTVITAVTAQ 60
           M MEGNGA     A+  KIPHVL+VAGSDSGAGAGIQADLK CAARGV+CSTVITAVTAQ
Sbjct: 35  MTMEGNGA-----AANKKIPHVLSVAGSDSGAGAGIQADLKACAARGVYCSTVITAVTAQ 89

Query: 61  NTVGVQGVNIVPEDFVAEQLKSVLSDMQVDVVKTGMLPSIGIVNILRQSLREFPVRG--- 117
           NT GVQGV+IV  DFVAEQLKSVLSDMQVDVVKTGMLPSIGIV IL Q+LREFPVR    
Sbjct: 90  NTAGVQGVDIVRNDFVAEQLKSVLSDMQVDVVKTGMLPSIGIVKILHQNLREFPVRALVV 149

Query: 118 -----SFGG*SCHGIYKWRCASWSFHSFLFSADIITPNIKEASALLGGTPLKTVADMRSA 172
                S  G    G     C        L  A+I+TPNIKEASALLGG PL+T+ADMRSA
Sbjct: 150 DPVMVSTSGDVLAGPSIVSCFR---EELLPMANIVTPNIKEASALLGGMPLETLADMRSA 206

Query: 173 AKLLHAIGPRNVLVKGGDLPDSLDAVDIFFDGKNYHELRASRIKTRNTHGTGCTLASCIA 232
           AKLLHA+GP+NVLVKGGDLPDSLDAVDIFFDG++YHELR+SRIKTRNTHGTGCTLASCIA
Sbjct: 207 AKLLHALGPQNVLVKGGDLPDSLDAVDIFFDGEDYHELRSSRIKTRNTHGTGCTLASCIA 266

Query: 233 AELAKGSPMLSAVKIAKRYVETALEYSKD 261
           AELAKGSPMLSAVK+AK Y+ETALEYSKD
Sbjct: 267 AELAKGSPMLSAVKVAKCYIETALEYSKD 295


>32977.m000014 phosphomethylpyrimidine kinase, putative
          Length = 285

 Score = 92.0 bits (227), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 122/260 (46%), Gaps = 30/260 (11%)

Query: 20  PHVLTVAGSDSGAGAGIQADLKTCAARGVFCSTVITAVTAQNTVGVQGVNIVPEDFVAEQ 79
           P VLT A +D  +GAG+QAD+   A+ G +  +VIT +T Q+TVGV+ V  +  D++ +Q
Sbjct: 6   PTVLTFAATDPSSGAGVQADIMALASIGCYPLSVITGITVQDTVGVESVMPLDADWINDQ 65

Query: 80  LKSVLSDMQVDVVKTGMLPSIGIVNILRQSLREFP----------VRGSFGG*SCHGIYK 129
            +++L D+ V   K G+L S+  V ++ + + ++P            G     S   +  
Sbjct: 66  ARAILEDVSVSAFKLGLLGSVENVAVIAEIVADYPDVPLIIDPILASGRGDELSNEEMQA 125

Query: 130 WRCASWSFHSFLF-SADIITPNIKEASALLGGTPLKTV--ADMRSAAKLLHAIGPRNVLV 186
             C        LF  A +ITPN  EA  L        V  + +   A  L  +G   V++
Sbjct: 126 AMC------ELLFPQATLITPNSLEARRLAYYDESDEVKHSSLEECALRLLGMGTEYVMI 179

Query: 187 KGG-----DLPDSLDAVDIFFDG--KNYHELRASRIKTRNTHGTGCTLASCIAAELAKGS 239
            G      D+ +SL  V     G  K+YH  R       + HG+GCTL S I A LA G 
Sbjct: 180 TGTHERSLDVVNSLYGVQNEIPGLIKDYHWERLP----GSYHGSGCTLTSAITACLAHGL 235

Query: 240 PMLSAVKIAKRYVETALEYS 259
            M  AV  A+ +    L ++
Sbjct: 236 TMEEAVHEAQEFTWQTLRHA 255