Jatropha Genome Database

JcCA0061381.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0061381.10 - phase: 0 
         (487 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29950.m001181 aromatic amino acid decarboxylase, putative             661   0.0  
29637.m000726 aromatic amino acid decarboxylase, putative             534   e-152
28725.m000309 aromatic amino acid decarboxylase, putative             389   e-108
60499.m000013 aromatic amino acid decarboxylase, putative             371   e-103
27544.m000014 aromatic amino acid decarboxylase, putative             287   8e-78
29439.m000226 hypothetical protein                                     73   3e-13

>29950.m001181 aromatic amino acid decarboxylase, putative
          Length = 445

 Score =  661 bits (1705), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/486 (67%), Positives = 377/486 (77%), Gaps = 45/486 (9%)

Query: 1   MDSLSTNTFSPLDTKTFKDESNMVVEFIEEYYKNIEKYPVQSQVQPGFLSSKLPKTPPYY 60
           MDSLS NTFSPLDT TF DES M                            K+P + P +
Sbjct: 1   MDSLSLNTFSPLDTNTFSDESKM----------------------------KIPSSKPGF 32

Query: 61  PEPLEDILKDVTDTIIPGLTHWQSPNFFAYFQANVSNAGFLGEMLCSGFNVVGFNWISSP 120
              +                   SPNFFAYFQAN SNAGFLGEMLCSG NVVGFNWISSP
Sbjct: 33  NLDISX----------------ASPNFFAYFQANASNAGFLGEMLCSGLNVVGFNWISSP 76

Query: 121 AATELESLVMDWMGXXXXXXXXXXXXGTGGGVLHGSTCEAIVCTLAAARDKALQTIGWDK 180
           AATELESLV+DWMG            G GGGVLHGSTCEAI+CTL AARD+AL+ +GWDK
Sbjct: 77  AATELESLVVDWMGNLMKLPSSFLFSGNGGGVLHGSTCEAIICTLVAARDRALKRLGWDK 136

Query: 181 ITKLIIYASDQTHSTLFKGARLIGIPSSNIRNLPTSFSTGFSLSPQILSDTIDNDIKFGF 240
           ITKL++YASDQTH+TL KG R++GIP SNIR+LPTS+S+GFSLS + L + I+NDIK G 
Sbjct: 137 ITKLVVYASDQTHATLQKGTRIVGIPFSNIRSLPTSYSSGFSLSSRTLQEAIENDIKSGL 196

Query: 241 YPLFLCATVGTTACGAVDPIKELAEIAKGYNLWFHIDAAYAGSACICPEFRHYLDGVESA 300
            P+FLCATVGTT CGAVDPI+EL +IA  Y+LWFHIDAAYAGSACICPEFR+YL+GVE A
Sbjct: 197 VPIFLCATVGTTTCGAVDPIEELGKIATKYDLWFHIDAAYAGSACICPEFRNYLNGVELA 256

Query: 301 DSLSMNPHKWLLTNMDCCCLWIKRPNLLVDSLSSEAEFLKNAVSESKAIIDYKDWQIALS 360
           DS+SMNPHKW LTNMDCCCLW+K+P+ LVDSLS++ E+L+N  SES A+IDYKDWQIALS
Sbjct: 257 DSISMNPHKWFLTNMDCCCLWVKQPDFLVDSLSTKPEYLRNTASESSAVIDYKDWQIALS 316

Query: 361 RRFKALKLWIVIRRHGLANLMYHIRSDISLAKRFESFVRNDKRFEIVVPRKFALVCFRLK 420
           RRF+A+KLW+VIRRHGLA LM+HIRSD+++AKRFES V NDKRFEIVVPRKFALVCFRLK
Sbjct: 317 RRFRAIKLWVVIRRHGLATLMHHIRSDVNMAKRFESLVANDKRFEIVVPRKFALVCFRLK 376

Query: 421 PRNGTNDGRELNTQLLAAVNQSGRAFLTHGLAGG-YFIRCAIGSTLTEERHVDELWKLIQ 479
           P++G N   ELN +LLA VNQSG AFLTHG+AGG YFIRCAIGSTLTEERHVD+LWKLIQ
Sbjct: 377 PKDGANSSDELNRRLLAMVNQSGCAFLTHGVAGGIYFIRCAIGSTLTEERHVDDLWKLIQ 436

Query: 480 XTAQTV 485
             A ++
Sbjct: 437 EKAHSM 442


>29637.m000726 aromatic amino acid decarboxylase, putative
          Length = 492

 Score =  534 bits (1375), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 248/474 (52%), Positives = 331/474 (69%), Gaps = 2/474 (0%)

Query: 11  PLDTKTFKDESNMVVEFIEEYYKNIEKYPVQSQVQPGFLSSKLPKTPPYYPEPLEDILKD 70
           P+D +  ++  + +V+FI +YYK IE +PV SQV+PG+L   LP + P  PE L+++L D
Sbjct: 9   PMDAEQLREHGHKMVDFIADYYKTIENFPVLSQVEPGYLRKLLPDSAPNQPESLQNVLDD 68

Query: 71  VTDTIIPGLTHWQSPNFFAYFQANVSNAGFLGEMLCSGFNVVGFNWISSPAATELESLVM 130
           V   I+PG+THWQSPN+FAY+ +N S AGFLGEML +G N+VGF+WI+SPAATELE +V+
Sbjct: 69  VQAKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSAGINMVGFSWITSPAATELEMIVL 128

Query: 131 DWMGXXXXXXXXXXXXGTGGGVLHGSTCEAIVCTLAAARDKALQTIGWDKITKLIIYASD 190
           DW+G            G GGGV+ G+  EA++  L AARDK L+ +G D + KL++Y SD
Sbjct: 129 DWLGKMLKLPEEFLSTGQGGGVIQGTASEAVLVALVAARDKVLRRVGKDALRKLVVYGSD 188

Query: 191 QTHSTLFKGARLIGIPSSNIRNLPTSFSTGFSLSPQILSDTIDNDIKFGFYPLFLCATVG 250
           QTHS L K  ++ GI   N R L T  ST ++L+P +LS  I  DI  G  P FLCATVG
Sbjct: 189 QTHSALQKACQIGGIHPVNCRLLETDSSTNYALAPDLLSRAISEDISLGLIPFFLCATVG 248

Query: 251 TTACGAVDPIKELAEIAKGYNLWFHIDAAYAGSACICPEFRHYLDGVESADSLSMNPHKW 310
           TT+  AVDP+  L +IAK   +WFH+DAAYAGSAC+CPE+R Y+DGVE ADS +MN HKW
Sbjct: 249 TTSSTAVDPLLALGKIAKSNGMWFHVDAAYAGSACVCPEYRCYMDGVEEADSFNMNAHKW 308

Query: 311 LLTNMDCCCLWIKRPNLLVDSLSSEAEFLKNAVSESKAIIDYKDWQIALSRRFKALKLWI 370
            LTN DC  LW+K  N L+ SLS+  EFL+N  S++  ++DYKDWQI L RRF++LKLW+
Sbjct: 309 FLTNFDCSALWVKDRNALIQSLSTSPEFLQNKPSQTNTVVDYKDWQIPLGRRFRSLKLWM 368

Query: 371 VIRRHGLANLMYHIRSDISLAKRFESFVRNDKRFEIVVPRKFALVCFR-LKPRNGTNDGR 429
           V+R +G+  L  +IR+ I+LAK FE  +  D RFE+V P  FALVCFR L P N  + G 
Sbjct: 369 VLRLYGVEKLQCYIRNHINLAKYFEGLIAEDTRFEVVSPPIFALVCFRLLPPDNNVDHGN 428

Query: 430 ELNTQLLAAVNQSGRAFLTHG-LAGGYFIRCAIGSTLTEERHVDELWKLIQXTA 482
           +L+  LL AVN +G+ F++H  L+G Y +R A+G+ LTEERHV   WK++Q  A
Sbjct: 429 KLSHDLLDAVNSTGKIFISHTVLSGKYILRFAVGAPLTEERHVTAAWKVLQDEA 482


>28725.m000309 aromatic amino acid decarboxylase, putative
          Length = 316

 Score =  389 bits (999), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 177/310 (57%), Positives = 230/310 (74%), Gaps = 4/310 (1%)

Query: 180 KITKLIIYASDQTHSTLFKGARLIGIPSSNIRNLPTSFSTGFSLSPQILSDTIDNDIKFG 239
           K+T L++YASDQTHST  K  +L G+  SNIR LPTS  T FSLSP  L   I +D+  G
Sbjct: 3   KLTALVVYASDQTHSTFSKACKLAGLNPSNIRLLPTSLDTAFSLSPSTLRKAIQDDVASG 62

Query: 240 FYPLFLCATVGTTACGAVDPIKELAEIAKGYNLWFHIDAAYAGSACICPEFRHYLDGVES 299
             PL+LC TVGTT+  A+DP+ +LA++A  Y++W HIDAAY GSACICPEFR YLDGVE 
Sbjct: 63  LVPLYLCVTVGTTSTTAIDPVGQLADVANEYDMWIHIDAAYGGSACICPEFRGYLDGVER 122

Query: 300 ADSLSMNPHKWLLTNMDCCCLWIKRPNLLVDSLSSEAEFLKNAVSESKAIIDYKDWQIAL 359
            DSLS++PHKWLL+ +DCCCLW+K PNLLV +LS+  E+LKN  SES +++D+KDWQ+  
Sbjct: 123 VDSLSLSPHKWLLSYLDCCCLWVKSPNLLVQALSTNPEYLKNKQSESDSVVDFKDWQVGT 182

Query: 360 SRRFKALKLWIVIRRHGLANLMYHIRSDISLAKRFESFVRNDKRFEIVVPRKFALVCFRL 419
            RRFK+L+LW+++R +G++NL  HIRSD+ +AK FE FV++D RFEI+ PR FALVCFRL
Sbjct: 183 GRRFKSLRLWLILRSYGVSNLQGHIRSDVQMAKIFEGFVKSDPRFEIMTPRTFALVCFRL 242

Query: 420 KPR---NGTNDGRELNTQLLAAVNQSGRAFLTHGLAGG-YFIRCAIGSTLTEERHVDELW 475
           KP    +G+     +N +LL  VN SGR ++TH   GG Y +R A+G+TLTEERHV   W
Sbjct: 243 KPTHKLDGSKHTEMMNGKLLEWVNSSGRIYMTHTKVGGEYLLRFAVGTTLTEERHVVSAW 302

Query: 476 KLIQXTAQTV 485
           KLI+  A  +
Sbjct: 303 KLIKEGADVL 312


>60499.m000013 aromatic amino acid decarboxylase, putative
          Length = 239

 Score =  371 bits (952), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 179/239 (74%), Positives = 206/239 (86%)

Query: 23  MVVEFIEEYYKNIEKYPVQSQVQPGFLSSKLPKTPPYYPEPLEDILKDVTDTIIPGLTHW 82
           MV++FI EYYKNIEKYPVQSQVQPG+LS+KLPK+ PY PE +EDILKD++D+IIPGLTHW
Sbjct: 1   MVIDFIAEYYKNIEKYPVQSQVQPGYLSTKLPKSAPYCPESIEDILKDISDSIIPGLTHW 60

Query: 83  QSPNFFAYFQANVSNAGFLGEMLCSGFNVVGFNWISSPAATELESLVMDWMGXXXXXXXX 142
           QSPNFFAYFQ N SNAGFLGEMLCSG NVVGFNWISSPAATELESLV+DWMG        
Sbjct: 61  QSPNFFAYFQINASNAGFLGEMLCSGLNVVGFNWISSPAATELESLVVDWMGNLMKLPSS 120

Query: 143 XXXXGTGGGVLHGSTCEAIVCTLAAARDKALQTIGWDKITKLIIYASDQTHSTLFKGARL 202
               G GGGVLHGSTCEAI+CTL AARD+AL+ +GWDKITKL++YASDQTH+TL KG R+
Sbjct: 121 FLFSGNGGGVLHGSTCEAIICTLVAARDRALKRLGWDKITKLVVYASDQTHATLQKGTRI 180

Query: 203 IGIPSSNIRNLPTSFSTGFSLSPQILSDTIDNDIKFGFYPLFLCATVGTTACGAVDPIK 261
           +GIP SNIR+LPTS+S+GFSLS + L + I+NDIK G  P+FLCATVGTT CGAVDPI+
Sbjct: 181 VGIPFSNIRSLPTSYSSGFSLSSRTLQEAIENDIKSGLVPIFLCATVGTTTCGAVDPIE 239


>27544.m000014 aromatic amino acid decarboxylase, putative
          Length = 174

 Score =  287 bits (735), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 133/172 (77%), Positives = 153/172 (88%), Gaps = 1/172 (0%)

Query: 315 MDCCCLWIKRPNLLVDSLSSEAEFLKNAVSESKAIIDYKDWQIALSRRFKALKLWIVIRR 374
           MDCCCLW+K+P+ LVDSLS E E+L+N  SES A+IDYKDWQIALSRRF+A+KLW+VIRR
Sbjct: 1   MDCCCLWVKQPDSLVDSLSIEPEYLRNTASESGAVIDYKDWQIALSRRFRAIKLWVVIRR 60

Query: 375 HGLANLMYHIRSDISLAKRFESFVRNDKRFEIVVPRKFALVCFRLKPRNGTNDGRELNTQ 434
           HGLA LM+HIRSD+++AKRFES V NDKRFEIVVPRKFALVCFRLKP++G N   ELN +
Sbjct: 61  HGLATLMHHIRSDVNMAKRFESLVANDKRFEIVVPRKFALVCFRLKPKDGANSSDELNRR 120

Query: 435 LLAAVNQSGRAFLTHGLAGG-YFIRCAIGSTLTEERHVDELWKLIQXTAQTV 485
           LLA VNQSGRAFLTHG+AGG YFIRCAIGSTLTEERHVD+LWKLIQ  A ++
Sbjct: 121 LLAMVNQSGRAFLTHGVAGGIYFIRCAIGSTLTEERHVDDLWKLIQEKAHSM 172


>29439.m000226 hypothetical protein
          Length = 58

 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 35/58 (60%), Positives = 40/58 (68%)

Query: 104 MLCSGFNVVGFNWISSPAATELESLVMDWMGXXXXXXXXXXXXGTGGGVLHGSTCEAI 161
           ML  G N+VGFNWISSPAATELES +++WM             G GGGVLHGSTC+AI
Sbjct: 1   MLSLGLNIVGFNWISSPAATELESPIVNWMANLLKLPSSFLFSGNGGGVLHGSTCKAI 58