Jatropha Genome Database

JcCA0051561.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0051561.10 - phase: 0 /partial
         (113 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29751.m001806 Glucose-6-phosphate/phosphate translocator 1, chlo...   156   2e-39
29610.m000400 Glucose-6-phosphate/phosphate translocator 1, chlo...   142   4e-35
29937.m000199 Glucose-6-phosphate/phosphate translocator 1, chlo...   109   2e-25
30190.m011065 Triose phosphate/phosphate translocator, chloropla...   104   8e-24

>29751.m001806 Glucose-6-phosphate/phosphate translocator 1,
           chloroplast precursor, putative
          Length = 259

 Score =  156 bits (394), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 78/101 (77%), Positives = 83/101 (82%)

Query: 1   MCIGATAARALKSVLQGILLSNEGEKLHSMNLLMFMXXXXXXXXXXXXXXMERDVVGITI 60
           MCIGATAARALKSVLQGILLS+EGE+LHSMNLL++M              ME DV+GI I
Sbjct: 112 MCIGATAARALKSVLQGILLSSEGERLHSMNLLLYMAPVAVAFLLPVAIFMEGDVIGIAI 171

Query: 61  ALARDDMRFIVYLTFNSALAYFVNLANFLVTKHTSALTLQV 101
           ALARDD RFI YLTFNSALAYFVNLANFLVTKHTSALTLQV
Sbjct: 172 ALARDDTRFIFYLTFNSALAYFVNLANFLVTKHTSALTLQV 212


>29610.m000400 Glucose-6-phosphate/phosphate translocator 1,
           chloroplast precursor, putative
          Length = 244

 Score =  142 bits (357), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 72/101 (71%), Positives = 81/101 (80%)

Query: 1   MCIGATAARALKSVLQGILLSNEGEKLHSMNLLMFMXXXXXXXXXXXXXXMERDVVGITI 60
           MCI ATAARALKSVLQGILLS+EGEKL+SMNLL++M              ME +VVGIT+
Sbjct: 97  MCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVFLLPATLIMEDNVVGITL 156

Query: 61  ALARDDMRFIVYLTFNSALAYFVNLANFLVTKHTSALTLQV 101
           ALARD+++ I YL FNSALAYFVNL NFLVTKHTSALTLQV
Sbjct: 157 ALARDNIKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQV 197


>29937.m000199 Glucose-6-phosphate/phosphate translocator 1,
           chloroplast precursor, putative
          Length = 263

 Score =  109 bits (273), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 57/101 (56%), Positives = 71/101 (70%)

Query: 1   MCIGATAARALKSVLQGILLSNEGEKLHSMNLLMFMXXXXXXXXXXXXXXMERDVVGITI 60
           MCI ATAARA KSVLQGILLS+EGEKL+SMNL+++M              ME +V+ +T+
Sbjct: 116 MCISATAARAFKSVLQGILLSSEGEKLNSMNLMLYMSPIAVLVLLPAALIMEPNVLEVTL 175

Query: 61  ALARDDMRFIVYLTFNSALAYFVNLANFLVTKHTSALTLQV 101
           +L R+     + L  NS +AY  NL+NFLVTKHTSALTLQV
Sbjct: 176 SLGREHKFMWLLLLVNSTMAYSANLSNFLVTKHTSALTLQV 216


>30190.m011065 Triose phosphate/phosphate translocator, chloroplast
           precursor, putative
          Length = 360

 Score =  104 bits (260), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 57/102 (55%), Positives = 71/102 (69%), Gaps = 2/102 (1%)

Query: 1   MCIGATAARALKSVLQGILLSNEGEKLHSMNLLMFMXXXXXXXXXXXXXXMERDVVGITI 60
           +C+G+TA RALKSV+QGILL++E EKLHSMNLL++M              +E +V   TI
Sbjct: 209 VCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMAALILLPFTLYIEGNVAANTI 268

Query: 61  ALARDDMRFIVYLTF-NSALAYFVNLANFLVTKHTSALTLQV 101
             A+ D  FIV+L   N+ +AY VNL NFLVTKHTSALTLQV
Sbjct: 269 EKAKGD-PFIVFLLIGNATVAYLVNLTNFLVTKHTSALTLQV 309