Jatropha Genome Database

JcCA0046261.60
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0046261.60 + phase: 0 /TE/partial
         (1707 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29674.m000206 conserved hypothetical protein                          189   7e-48
28296.m000014 conserved hypothetical protein                           65   2e-10
29904.m003003 conserved hypothetical protein                           65   2e-10
29997.m000412 conserved hypothetical protein                           54   1e-06

>29674.m000206 conserved hypothetical protein
          Length = 496

 Score =  189 bits (481), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 116/322 (36%), Positives = 187/322 (58%), Gaps = 23/322 (7%)

Query: 437 RLAKTRKESEEKDILETFRRVEVNIPLLDAIKQIPKYAKFLKELCTNKRKVDSVEKVEMG 496
           RL + + + +    L+ F+++++N+P ++AI Q+ KYAKFLKE+ +N RK++ + +V + 
Sbjct: 191 RLRQDKVDKQYSKFLDLFKQLKINLPFVEAISQMAKYAKFLKEILSNNRKLEDLGQVVLN 250

Query: 497 EVCSAMIQRKRLPPKCKDRGMFAIPCKIGNVGIKRSMCDLGASINVMPLSVYSSFKGCPL 556
           E CSA++Q K LP K +D   F IPC IG++ I  ++ DLGASIN+MP S+++       
Sbjct: 251 EECSAILQNK-LPLKRRDLESFTIPCMIGDLSISGALADLGASINLMPTSLFAKLGLHEP 309

Query: 557 KETCIIIQLADRSIVYPLGLLEDVLVQVGDLIFPADFYVLNMEDDKSSTVADLLLGRPFL 616
           K T + +QLADR++  P G++EDVL++V   IFP DF V++ME +  STV  L+LGRPFL
Sbjct: 310 KPTRMSVQLADRTVKIPRGIIEDVLIKVDKFIFPVDFVVMDMEGE--STVP-LILGRPFL 366

Query: 617 RTARTKIDAYEGTLSMEFDGEKVEFNVYEAMKYPXXXXXXXXXXXXXPLAQEIFELNAVD 676
            T+R  ID  +G L +  D E + F++  +M+                    ++  + +D
Sbjct: 367 ATSRAVIDVSDGKLKLRVDDETITFDLATSMRQSLDYD------------NTVYSTDVID 414

Query: 677 E-----LDLVLCRNINMDSIKEIEETFLVNENVQEIVCEMETNQPLTSSRSHIVLP-SHH 730
           +     L  +LC +    ++ E EE  L NE V E +  +  ++P  S+  ++ L  S  
Sbjct: 415 DVVESHLQEILCSDPLQVALAEDEEE-LSNEQVLEQLAVLLASEPSLSTDPYLFLDRSGV 473

Query: 731 EKLLPSVLQAPKLELKPLPGHL 752
           +K+  S    P L+LK LP HL
Sbjct: 474 QKVKTSFKDPPVLKLKELPSHL 495



 Score = 75.5 bits (184), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 66/130 (50%), Gaps = 4/130 (3%)

Query: 129 LYDYWERFKKLCAACPQHRMSEQSLIXYFYEGMLDMERKMVDAASGGALVNKTPFAAREI 188
           +YD WERFK L   CP H +     +  FY G+    R+MVDAA+GGAL NKTP  A+ +
Sbjct: 1   MYDAWERFKDLLRCCPHHGLLVWMQVQTFYSGLNLATRQMVDAAAGGALNNKTPEQAQNL 60

Query: 189 ISTMAANSQQF-GQVEEPSRK--LYQV-CDSSIQSQLNELTSIVKSIAAGQPVKRSVCEV 244
           I  MA N+ Q+      P R+  + QV   +++ +Q+  L   +  +          CE 
Sbjct: 61  IEEMAMNNNQWQSSRSRPGRQGVVNQVDSTAALAAQVELLAKKIDQLQTPVHAANVGCEF 120

Query: 245 CCSDHPTDTC 254
           C S H +  C
Sbjct: 121 CGSPHYSVNC 130


>28296.m000014 conserved hypothetical protein
          Length = 90

 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 45/87 (51%)

Query: 740 APKLELKPLPGHLKYAFLGNGDTLLXXXXXXXXXXXXXXXXXXXREYKEAIGWTIADIKG 799
           APK+ELK L  HLKY +LG  +TL                    R+ K  +  TI +I+ 
Sbjct: 1   APKVELKLLQSHLKYVYLGENNTLPVIISNKLTRLQKERVVKEPRDRKRVVSQTICNIQS 60

Query: 800 LSPSTCMHKILLEEGSKPTREAQRRLN 826
            S S  MHKILLEEGSK   E QR LN
Sbjct: 61  NSFSIYMHKILLEEGSKANFEPQRILN 87


>29904.m003003 conserved hypothetical protein
          Length = 361

 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 4/133 (3%)

Query: 31  LPTFHGMKTENPHNHLKEFHGVCSSMRPQGVTEEQIKLRAFPFSLKDAAKEWL-LNLPPG 89
           LP FHG   E P  HL  F  VC   R    +   + +R FP +L++ A  W  LN+ P 
Sbjct: 83  LPVFHGNSNECPIAHLSRFVKVC---RANNASSTDMMMRIFPVTLENEAALWYDLNIQPY 139

Query: 90  SITTWPDMARAFLDKYFPASRAAIIRREICGVRQKAGESLYDYWERFKKLCAACPQHRMS 149
              +W ++  +FL+ Y        +R ++  + Q + ES+  Y+ R + +    P H +S
Sbjct: 140 PSLSWDEIMLSFLEAYQRIKLVDQLRSDLMMLNQGSDESVRSYFMRLQWILKRWPDHGLS 199

Query: 150 EQSLIXYFYEGML 162
           +  L   F +G++
Sbjct: 200 DNMLKWIFIDGLM 212


>29997.m000412 conserved hypothetical protein
          Length = 66

 Score = 53.5 bits (127), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 40/52 (76%), Gaps = 4/52 (7%)

Query: 443 KESEEKD----ILETFRRVEVNIPLLDAIKQIPKYAKFLKELCTNKRKVDSV 490
           K++E K+     L+ FR++ +N+P +DA++Q+PKYAKFLK++ + KRK++ V
Sbjct: 13  KQAEAKEQFSKFLDIFRQLHINLPFIDALEQMPKYAKFLKDILSRKRKLEEV 64