Jatropha Genome Database

JcCA0046261.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0046261.10 - phase: 0 
         (77 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29908.m006133 Low-molecular-weight cysteine-rich protein LCR69 p...    91   1e-19
30225.m001709 8.4 kDa sulfur-rich protein precursor, putative          76   4e-15

>29908.m006133 Low-molecular-weight cysteine-rich protein LCR69
          precursor, putative
          Length = 77

 Score = 90.9 bits (224), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/77 (75%), Positives = 64/77 (83%)

Query: 1  MKNPMRPFSAVXXXXXXXVATEIGSKMAEARTCESQSHKFKGTCLSETNCANVCKTEGFT 60
          MK+PMR FS V       VATE+G+K+AEARTCESQSHKFKGTCLS TNCAN+CKTEGF 
Sbjct: 1  MKHPMRLFSTVFLLLLLLVATEMGAKVAEARTCESQSHKFKGTCLSTTNCANICKTEGFH 60

Query: 61 GGDCRGLRRRCFCTRHC 77
          GG CRG RRRCFCT+HC
Sbjct: 61 GGRCRGFRRRCFCTKHC 77


>30225.m001709 8.4 kDa sulfur-rich protein precursor, putative
          Length = 74

 Score = 75.9 bits (185), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 45/70 (64%)

Query: 8  FSAVXXXXXXXVATEIGSKMAEARTCESQSHKFKGTCLSETNCANVCKTEGFTGGDCRGL 67
          F  V       +A++      EAR CESQSH FKG CL + NCA VC+ E F+GG C+G+
Sbjct: 5  FFGVFLLLLIVLASQEAIVPTEARVCESQSHYFKGPCLRDHNCAMVCRNEAFSGGRCKGV 64

Query: 68 RRRCFCTRHC 77
          RRRCFCT+ C
Sbjct: 65 RRRCFCTKLC 74