Jatropha Genome Database

JcCA0045701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0045701.10 - phase: 0 
         (247 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29646.m001062 BRASSINAZOLE-RESISTANT 1 protein, putative              273   8e-74
30170.m013999 BRASSINAZOLE-RESISTANT 1 protein, putative              171   2e-43

>29646.m001062 BRASSINAZOLE-RESISTANT 1 protein, putative
          Length = 317

 Score =  273 bits (697), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 149/243 (61%), Positives = 158/243 (65%), Gaps = 1/243 (0%)

Query: 5   GSKPPPLEIAGTPTNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFDANPSTY 64
           G KPPP E+ GTPTNI                                   RF+ NPSTY
Sbjct: 76  GCKPPPTELTGTPTNISACSSIQPSPQSSNFPSPVPSYHASPSSSSFPSPTRFEGNPSTY 135

Query: 65  LLPFLRNIASIPANLPQLRISNSAPVTPPLSSPTNRSSKRKADWESFSNGPLNSFRHPLF 124
           LLPFLRNIASIPANLP LRISNSAPVTPPLSSPTNR+SKRKADWESFSNG L SF HPLF
Sbjct: 136 LLPFLRNIASIPANLPPLRISNSAPVTPPLSSPTNRNSKRKADWESFSNGSLKSFCHPLF 195

Query: 125 PVSAPSSPTRRQHLTPATIPECDESDASTVDSGRWVSFXXXXXXXXXXSPTFNLVKPIGQ 184
            +SAPSSPTRRQHLTPATIPECDESDASTVDSGRWV+F          SPTFNLVK + Q
Sbjct: 196 ALSAPSSPTRRQHLTPATIPECDESDASTVDSGRWVNFQAVAPQVAPPSPTFNLVKSVSQ 255

Query: 185 QSMFQDGIDHXXXXXXXXXXXXXXXXXXXXXXXXXVKPWEGERIHEIGVDDLELTLGSAK 244
           QS FQD +D                          VKPWEGERIHEIG++DLELTLGSAK
Sbjct: 256 QSAFQDRVD-GHGGLGWGPAAERGRVSEFEFENARVKPWEGERIHEIGMEDLELTLGSAK 314

Query: 245 AHG 247
           AH 
Sbjct: 315 AHA 317


>30170.m013999 BRASSINAZOLE-RESISTANT 1 protein, putative
          Length = 321

 Score =  171 bits (434), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/248 (41%), Positives = 134/248 (54%), Gaps = 18/248 (7%)

Query: 5   GSKPPPLEIAGTPTNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFD---ANP 61
           G +PPP++I GT   I                                   R D    N 
Sbjct: 85  GCRPPPIDIVGTSARITPYSSQNPSPLSSAFPSPIPSYQVSPSSSSFPSPTRGDNNHNNA 144

Query: 62  STYLLPFLRNIASIPANLPQLRISNSAPVTPPLSSPTNRSSKRKADWESFSNGPLNSFRH 121
           ++ +LPFL+N  +IPA+LP LRISNSAPVTPPLSSPT+R+ K   +WE  +   + SF +
Sbjct: 145 ASSILPFLQN--AIPASLPPLRISNSAPVTPPLSSPTSRNPKPIPNWEFIAKQSMASFNY 202

Query: 122 PLFPVSAPSSPTRRQHLTPATIPECDESDASTVDSGRWVSFXX---XXXXXXXXSPTFNL 178
           P + VSAP+SPT RQ   PATIPECDESD+STV+SG+W+SF             SPT+NL
Sbjct: 203 PFYAVSAPASPTHRQFHAPATIPECDESDSSTVESGQWISFQKFGPSMAAAMPTSPTYNL 262

Query: 179 VKPIGQQSMFQDGIDHXXXXXXXXXXXXXXXXXXXXXXXXXVKPWEGERIHEIGVDDLEL 238
           +KP+ +Q +  + I                           VKPWEGERIHE+G+DDLEL
Sbjct: 263 MKPVAEQILSSNVIKE----------NGRSMEFEFGNGNGQVKPWEGERIHEVGLDDLEL 312

Query: 239 TLGSAKAH 246
           TLG+ KA 
Sbjct: 313 TLGNGKAR 320