Jatropha Genome Database

JcCA0045571.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0045571.10 - phase: 0 
         (175 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30066.m000716 mannose-6-phosphate isomerase, putative                 231   1e-61
29980.m000173 mannose-6-phosphate isomerase, putative                 179   5e-46

>30066.m000716 mannose-6-phosphate isomerase, putative
          Length = 446

 Score =  231 bits (589), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 114/166 (68%), Positives = 134/166 (80%), Gaps = 8/166 (4%)

Query: 11  HHGQRLQRLKCSVQNYDWGKIGLDSKVGRLYELNSGSQIDVGKPYAELWMGTHESGPSFV 70
            H    +RLKCSV NYDWG +G +S+V RL+ LNSGS ID GKPYAE W+GTH+SGPSFV
Sbjct: 23  QHKNVPKRLKCSVHNYDWGIVGKNSQVARLFSLNSGSDIDPGKPYAEFWIGTHKSGPSFV 82

Query: 71  VENGVENGNPIGSHSISLKEWIFKNP-NVLGDKVLDKWGCDLPFLFKVLSVAKALSIQAH 129
                ++GN  G+ S+SLK+WI +NP  VLGDKV+ KWG DLPFLFKV+SV KALSIQAH
Sbjct: 83  -----DHGN--GNGSLSLKKWILENPYKVLGDKVMKKWGGDLPFLFKVISVGKALSIQAH 135

Query: 130 PDKELAKMLHKLHPDVYKDDNHKPEMALAITEFQALCGFISLKVLR 175
           PDKELAK LHK  P +YKDDNHKPEMALA+TEF+ALCGFIS+K L+
Sbjct: 136 PDKELAKALHKAQPSIYKDDNHKPEMALALTEFEALCGFISVKELK 181


>29980.m000173 mannose-6-phosphate isomerase, putative
          Length = 374

 Score =  179 bits (454), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 83/105 (79%), Positives = 94/105 (89%)

Query: 14  QRLQRLKCSVQNYDWGKIGLDSKVGRLYELNSGSQIDVGKPYAELWMGTHESGPSFVVEN 73
           Q L+RL+CSVQNY+WGKIG DS+V +LY LNSGS+I+V KPYAELWMGTH+SGPSFVVE+
Sbjct: 8   QGLKRLRCSVQNYNWGKIGSDSQVAKLYALNSGSEIEVDKPYAELWMGTHDSGPSFVVES 67

Query: 74  GVENGNPIGSHSISLKEWIFKNPNVLGDKVLDKWGCDLPFLFKVL 118
           G ENG  IGS S+SLK+WI KNPNVLGDKVLDKWGCDLPFLFK L
Sbjct: 68  GGENGIGIGSQSLSLKDWIAKNPNVLGDKVLDKWGCDLPFLFKEL 112