Jatropha Genome Database

JcCA0045261.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0045261.20 + phase: 0 
         (134 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29662.m000463 glutaredoxin-1, grx1, putative                          207   1e-54
29279.m000134 glutaredoxin-1, grx1, putative                          134   1e-32
29933.m001414 glutaredoxin-1, grx1, putative                          100   4e-22
30147.m013927 glutaredoxin-1, grx1, putative                           96   7e-21
29726.m004003 glutaredoxin, grx, putative                              66   6e-12
29631.m001004 glutaredoxin, grx, putative                              65   1e-11
29647.m002016 glutaredoxin, grx, putative                              64   1e-11
29693.m001964 glutaredoxin, grx, putative                              63   4e-11
29929.m004602 glutaredoxin, grx, putative                              62   1e-10
29647.m002013 glutaredoxin, grx, putative                              60   3e-10
30204.m001830 glutaredoxin, grx, putative                              59   6e-10
44776.m000022 glutaredoxin, grx, putative                              58   1e-09
29726.m004004 glutaredoxin, grx, putative                              58   2e-09
29647.m002012 glutaredoxin, grx, putative                              54   2e-08
30190.m010765 glutaredoxin, grx, putative                              50   3e-07

>29662.m000463 glutaredoxin-1, grx1, putative
          Length = 140

 Score =  207 bits (527), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 99/114 (86%), Positives = 106/114 (92%), Gaps = 1/114 (0%)

Query: 19  SLFWASTANDTTESAFVKKTISSHKIVIFSKSYCPYCKRAKAVFKELNKVPHVVELDERD 78
           SL WAS A  + +SAFVKKTISSHKIVIFSKSYCPYCKRAKAVFK+LN++PHVVELDERD
Sbjct: 27  SLSWASAATGS-DSAFVKKTISSHKIVIFSKSYCPYCKRAKAVFKQLNQIPHVVELDERD 85

Query: 79  DGQNIQDALSKVVGRRTVPQVFIDGKHIGGSDDTVEAYTSGELAKLLGIAAKND 132
           DGQNIQDALSK+VGRRTVPQVFIDGKHIGGSDDTVEAY SGELA LLGIA K+D
Sbjct: 86  DGQNIQDALSKIVGRRTVPQVFIDGKHIGGSDDTVEAYESGELADLLGIAGKDD 139


>29279.m000134 glutaredoxin-1, grx1, putative
          Length = 135

 Score =  134 bits (337), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 67/109 (61%), Positives = 80/109 (73%), Gaps = 1/109 (0%)

Query: 19  SLFWASTANDTTESAFVKKTISSHKIVIFSKSYCPYCKRAKAVFKELNKVPHVVELDERD 78
           SL  A  A+++  SAFV+  I+S  IVIFSKSYCPYC RAK +F EL++ P+VVELD RD
Sbjct: 27  SLVNAVNASNSA-SAFVQNLINSQTIVIFSKSYCPYCLRAKRIFNELHEQPYVVELDLRD 85

Query: 79  DGQNIQDALSKVVGRRTVPQVFIDGKHIGGSDDTVEAYTSGELAKLLGI 127
           DG  IQ  L  + GRRTVPQVF++GKHIGGSDD   A  SG+L KLL I
Sbjct: 86  DGAQIQYVLLDLFGRRTVPQVFVNGKHIGGSDDLKAAVQSGKLQKLLAI 134


>29933.m001414 glutaredoxin-1, grx1, putative
          Length = 102

 Score = 99.8 bits (247), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 45/90 (50%), Positives = 59/90 (65%)

Query: 36  KKTISSHKIVIFSKSYCPYCKRAKAVFKELNKVPHVVELDERDDGQNIQDALSKVVGRRT 95
           K+ +SS+ +V+FSK+YCPYC   K +  +L     VVELD   DG  IQ AL++  G+RT
Sbjct: 7   KELVSSNAVVVFSKTYCPYCTSVKKLLDQLGAKYKVVELDTESDGSEIQTALAEWTGQRT 66

Query: 96  VPQVFIDGKHIGGSDDTVEAYTSGELAKLL 125
           VP VFI GKHIGG D T   ++ G+L  LL
Sbjct: 67  VPNVFIGGKHIGGCDSTTAKHSQGQLVPLL 96


>30147.m013927 glutaredoxin-1, grx1, putative
          Length = 125

 Score = 95.5 bits (236), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 43/86 (50%), Positives = 57/86 (66%)

Query: 40  SSHKIVIFSKSYCPYCKRAKAVFKELNKVPHVVELDERDDGQNIQDALSKVVGRRTVPQV 99
           +S  +V+FSK+YC YC R K +  +L     ++EL+E  DG +IQ AL++  G RTVP V
Sbjct: 27  NSAPVVVFSKTYCGYCNRVKQLLTQLGANFKIIELNEEADGDDIQAALAQWTGLRTVPNV 86

Query: 100 FIDGKHIGGSDDTVEAYTSGELAKLL 125
           FI GKHIGG D T++ Y  GEL  LL
Sbjct: 87  FIGGKHIGGCDSTLDKYQKGELLPLL 112


>29726.m004003 glutaredoxin, grx, putative
          Length = 102

 Score = 65.9 bits (159), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 49/91 (53%)

Query: 35  VKKTISSHKIVIFSKSYCPYCKRAKAVFKELNKVPHVVELDERDDGQNIQDALSKVVGRR 94
           V K  S   +VIFSKS C  C   K +F E    P + ELDE   G  ++ AL ++    
Sbjct: 4   VAKLASQKAVVIFSKSSCCMCHAIKRLFYEQGVSPAIYELDEDSRGTEMEWALMRLGCNP 63

Query: 95  TVPQVFIDGKHIGGSDDTVEAYTSGELAKLL 125
           +VP VFI GK +G ++  +  + +G L KLL
Sbjct: 64  SVPAVFIGGKFVGSANTIMTLHLNGSLKKLL 94


>29631.m001004 glutaredoxin, grx, putative
          Length = 165

 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 2/72 (2%)

Query: 35  VKKTISSHKIVIFSKSYCPYCKRAKAVFKELNKVPHVVELDERD-DGQNIQDALSKVVGR 93
           VKKT+  + +V++SK++C Y    KA+FK+L   P V+ELDE    G  IQ  L ++ G+
Sbjct: 75  VKKTVDENPVVVYSKTWCSYSSEVKALFKKLGVEPLVIELDELGAQGPQIQKVLERLTGQ 134

Query: 94  RTVPQVFIDGKH 105
            TVP VFI GK+
Sbjct: 135 HTVPNVFI-GKY 145


>29647.m002016 glutaredoxin, grx, putative
          Length = 102

 Score = 64.3 bits (155), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%)

Query: 35  VKKTISSHKIVIFSKSYCPYCKRAKAVFKELNKVPHVVELDERDDGQNIQDALSKVVGRR 94
           V+   S+   VIF+KS C  C   K +F EL   P + ELD   +G+ ++ AL  +    
Sbjct: 4   VRDLASTRAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDRDANGREMEWALRGLGCSP 63

Query: 95  TVPQVFIDGKHIGGSDDTVEAYTSGELAKLL 125
           +VP VFI GK++G + D +  +  G L ++L
Sbjct: 64  SVPAVFIGGKYVGSAKDVLSLHLDGSLKQML 94


>29693.m001964 glutaredoxin, grx, putative
          Length = 127

 Score = 62.8 bits (151), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 35  VKKTISSHKIVIFSKSYCPYCKRAKAVFKELNKVPHVVELDERDDGQNIQDALSKVV--G 92
           V+   SS+ +V+FS S C  C  AK +   L   P + ELD    G +IQ  L ++   G
Sbjct: 27  VRHLASSNAVVLFSMSGCCMCTVAKRLLFGLGVGPTIFELDHHSAGHDIQAVLFQLASEG 86

Query: 93  RRTVPQVFIDGKHIGGSDDTVEAYTSGELAKLL 125
           ++ VP +F+ GK +GG +  +  + +G L  LL
Sbjct: 87  QQPVPAIFVGGKFLGGIETLMACHINGTLVPLL 119


>29929.m004602 glutaredoxin, grx, putative
          Length = 128

 Score = 61.6 bits (148), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 35  VKKTISSHKIVIFSKSYCPYCKRAKAVFKELNKVPHVVELDERDDGQNIQDALSKVVGRR 94
           V +  S   +VIFS S C  C   K +F  +   P V ELD+   G+ I+ AL +++G  
Sbjct: 28  VVRLASESAVVIFSISSCCMCHAVKRLFCGMGVNPTVYELDQDPRGKEIERALMRLLGNY 87

Query: 95  T--VPQVFIDGKHIGGSDDTVEAYTSGELAKLL 125
           +  VP VFI GK IG  D  + ++ +G L  LL
Sbjct: 88  SSVVPVVFIGGKLIGAMDRVMASHINGTLVPLL 120


>29647.m002013 glutaredoxin, grx, putative
          Length = 104

 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 1/91 (1%)

Query: 35  VKKTISSHKIVIFSKSYCPYCKRAKAVFKELNKVPHVVELDERDDGQNIQDALSKVVGRR 94
           V + ++   +VIFS+S C  C   K + +     P + ELD+  +GQ ++ AL + +G  
Sbjct: 4   VTRMVAERPLVIFSRSTCDMCHSIKMLVRGFGANPTIYELDQISNGQQVEQALRQ-LGSE 62

Query: 95  TVPQVFIDGKHIGGSDDTVEAYTSGELAKLL 125
            +P VFI G+ +GG    +      +L  LL
Sbjct: 63  NLPAVFIGGECVGGDRQVMSLLLKNQLGPLL 93


>30204.m001830 glutaredoxin, grx, putative
          Length = 158

 Score = 58.9 bits (141), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 35  VKKTISSHKIVIFSKSYCPYCKRAKAVFKELNKVPHVVELDERD-DGQNIQDALSKVVGR 93
           VK+T+S   +V++SK++C Y    KA+F++L   P V+ELDE    G  IQ  L ++ G+
Sbjct: 83  VKRTVSESPVVVYSKTWCSYSSEVKALFRKLGVNPLVIELDELGAQGPQIQKVLERLTGQ 142

Query: 94  RTVP 97
            TVP
Sbjct: 143 HTVP 146


>44776.m000022 glutaredoxin, grx, putative
          Length = 175

 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 43  KIVIFSKSYCPYCKRAKAVFKELNKVPHVVELDERDDGQNIQDALSKVVGRRTVPQVFID 102
           ++ I++   C YC  AK +     K   V E+D   D Q +Q+ +++  GRRTVPQ+F  
Sbjct: 93  QVTIYTSPVCGYCTMAKRLLA--GKGVAVTEIDAGSDPQALQEMMTRS-GRRTVPQIFFG 149

Query: 103 GKHIGGSDDTVEAYTSG 119
            +HIGG DD V    SG
Sbjct: 150 ERHIGGYDDLVALDRSG 166


>29726.m004004 glutaredoxin, grx, putative
          Length = 101

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 1/91 (1%)

Query: 35  VKKTISSHKIVIFSKSYCPYCKRAKAVFKELNKVPHVVELDERDDGQNIQDALSKVVGRR 94
           V +  +   +VIFS+S C  C   K +  +    P V ELDE   G+ I+ ALS+ +G  
Sbjct: 4   VIQLAAERPVVIFSRSTCCMCHAIKTLLCDFGVNPAVHELDEMARGREIEQALSR-LGSP 62

Query: 95  TVPQVFIDGKHIGGSDDTVEAYTSGELAKLL 125
           T+P VFI  + +GG+++ +  + +  L  +L
Sbjct: 63  TLPAVFIGSELVGGANEVMSLHLNRSLIPML 93


>29647.m002012 glutaredoxin, grx, putative
          Length = 102

 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 44/92 (47%)

Query: 34  FVKKTISSHKIVIFSKSYCPYCKRAKAVFKELNKVPHVVELDERDDGQNIQDALSKVVGR 93
            V + +    +VIFSKS C      K++       P V ELD   +GQ I+  L ++  +
Sbjct: 3   MVNRLVKEKPVVIFSKSSCCMSHTIKSLICGFGANPTVYELDRIPNGQQIERTLMQLGCQ 62

Query: 94  RTVPQVFIDGKHIGGSDDTVEAYTSGELAKLL 125
            +VP VFI  K +GG    +  +   +L  LL
Sbjct: 63  PSVPSVFIGQKLVGGEKQVMSLHVQNQLIPLL 94


>30190.m010765 glutaredoxin, grx, putative
          Length = 146

 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 9/100 (9%)

Query: 34  FVKKTISSHKIVIFSKSYCPYCKRAKAVFKELNKVPHVVELDERDDGQNIQDALSKV--- 90
           +V+K +  + +++F K  C  C   K +   L   P V E+DE+++   I D LS +   
Sbjct: 40  YVQKLVLENSVIVFGKRGCCMCHVVKRLLLGLGVNPAVFEVDEKEE-TAIIDELSIIDGD 98

Query: 91  -----VGRRTVPQVFIDGKHIGGSDDTVEAYTSGELAKLL 125
                 G+   P VF+ GK  GG +  +  + SGEL  +L
Sbjct: 99  TEREDGGQVQFPVVFVGGKLFGGLERVMATHISGELVPIL 138