Jatropha Genome Database

JcCA0044701.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0044701.20 - phase: 0 
         (262 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29726.m003893 Protein SSM1, putative                                  451   e-127
30076.m004529 catalytic, putative                                     246   9e-66
28650.m000182 catalytic, putative                                     239   8e-64
28650.m000183 catalytic, putative                                     233   9e-62
29767.m000206 catalytic, putative                                     176   8e-45

>29726.m003893 Protein SSM1, putative
          Length = 264

 Score =  451 bits (1159), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 222/264 (84%), Positives = 240/264 (90%), Gaps = 2/264 (0%)

Query: 1   MDCYGKTSSPIDCLIFDLDDTLYSSKLGIAEALRKNIDDFLVEKCGFPENKASTLRVELF 60
           MDC G T SP DCLIFDLDDTLYSSKLGIAEALRKNIDDFLVEKCGF ++KAS+LRVELF
Sbjct: 1   MDCSGATKSPFDCLIFDLDDTLYSSKLGIAEALRKNIDDFLVEKCGFAQDKASSLRVELF 60

Query: 61  KTYGSSLAGLRALGYDIDADDYHSVVHGRLPYDLIKPNGQLRNILRSITQRKIIFTNSDR 120
           KTYGSSLAGLRALGYDIDADDYHS VHGRLPYDLIKP+GQLRNIL SI QRK+IFTNSDR
Sbjct: 61  KTYGSSLAGLRALGYDIDADDYHSFVHGRLPYDLIKPDGQLRNILLSIPQRKLIFTNSDR 120

Query: 121 VHAIKVLKRLGLEDCFDQIICFETMNPNLSKSTRPDEFPVLLKPSMDAMKIALQVANVDP 180
            HA+K L+RLG+EDCFDQIICFETMNPNLS+STRPDEFPVLLKPS+DAMKIAL VA+++P
Sbjct: 121 NHAMKSLERLGIEDCFDQIICFETMNPNLSRSTRPDEFPVLLKPSIDAMKIALHVADINP 180

Query: 181 RRTLFLDDNARNVAAGKAMGLRTVLVGKTVKSKEADYVLENVNKLAQVIPEILGSGKDSG 240
            RTLFLDDN RNVAAGKAMGL TVLVGKTVKSKEADY+LE V KL QVIPEI  SG+DSG
Sbjct: 181 SRTLFLDDNVRNVAAGKAMGLSTVLVGKTVKSKEADYLLEYVIKLPQVIPEIWMSGEDSG 240

Query: 241 --EQRISRTRSEIDSMLATAPVGA 262
              +RISRTRSE+DS+LA  PVGA
Sbjct: 241 GDGRRISRTRSEMDSILAPTPVGA 264


>30076.m004529 catalytic, putative
          Length = 283

 Score =  246 bits (627), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 115/269 (42%), Positives = 178/269 (66%), Gaps = 25/269 (9%)

Query: 12  DCLIFDLDDTLYSSKLGIAEALRKNIDDFLVEKCGFPENKASTLRVELFKTYGSSLAGLR 71
           +CL+FD+DDTLY    G+  A RKNI++F++      E++   + +EL++ YG+++AGL+
Sbjct: 13  ECLLFDMDDTLYPMSSGLNLACRKNIEEFMLHHLNIEESEVPRMCLELYREYGTTMAGLK 72

Query: 72  ALGYDIDADDYHSVVHGRLPYDLIKPNGQLRNILRSITQRKIIFTNSDRVHAIKVLKRLG 131
           A+GY+ D D++H+  HGRLPY+ +KP+  LRN+L S+ QRKIIFTN+D+ HA +VL+RLG
Sbjct: 73  AIGYEFDDDEFHAFAHGRLPYEKLKPDPVLRNLLLSMPQRKIIFTNADKAHAAEVLQRLG 132

Query: 132 LEDCFDQIICFETMNPNLSKSTRPDEFP-------------------------VLLKPSM 166
           LEDCF+ IICFET+NP L  +   D                            +L KPS+
Sbjct: 133 LEDCFEGIICFETLNPPLGTANYMDALDDDEVLASGEPQHSDLDDADTNSKPRILCKPSL 192

Query: 167 DAMKIALQVANVDPRRTLFLDDNARNVAAGKAMGLRTVLVGKTVKSKEADYVLENVNKLA 226
           +AM+ A+++A+VDP+RT+F DD+ RN+A+GKA GL TV+VG +V    AD+VL +++ + 
Sbjct: 193 EAMEAAIRIADVDPKRTIFFDDSVRNIASGKAAGLHTVIVGSSVLVPGADHVLSSIHNIK 252

Query: 227 QVIPEILGSGKDSGEQRISRTRSEIDSML 255
           + IPEI     +  EQ I  + S +++++
Sbjct: 253 EAIPEIWEGEGEHLEQVIPSSASAVEALV 281


>28650.m000182 catalytic, putative
          Length = 281

 Score =  239 bits (611), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 112/254 (44%), Positives = 168/254 (66%), Gaps = 22/254 (8%)

Query: 2   DCYGKTSSP-IDCLIFDLDDTLYSSKLGIAEALRKNIDDFLVEKCGFPENKASTLRVELF 60
           D Y ++  P  D L+FD+DDTLY    G ++ + KNI +++V+K G  ENK + L   L+
Sbjct: 5   DQYQQSIVPKYDTLLFDVDDTLYPLSTGFSKEVTKNIQEYMVQKLGMQENKVAALNQVLY 64

Query: 61  KTYGSSLAGLRALGYDIDADDYHSVVHGRLPYDLIKPNGQLRNILRSITQRKIIFTNSDR 120
           + YG+S+AGL+A+GYD D DDYHS VHGRLPY+ +KP+  LR++L S+  R++IF+N+D 
Sbjct: 65  RNYGTSMAGLKAIGYDFDNDDYHSFVHGRLPYEKLKPDHFLRSLLLSLPVRRVIFSNADE 124

Query: 121 VHAIKVLKRLGLEDCFDQIICFETMNPNLSKSTRPDE---------------------FP 159
           +H  K L +LGLEDCF+ I+CFET+NPN   ST  D+                      P
Sbjct: 125 IHVAKTLSKLGLEDCFESIVCFETINPNHKTSTCNDQSEVKFGSEMLENFEIGSVLPKTP 184

Query: 160 VLLKPSMDAMKIALQVANVDPRRTLFLDDNARNVAAGKAMGLRTVLVGKTVKSKEADYVL 219
           ++ KP  +A + A ++AN++P+RT+F DD+ RN+  GK MGL+TVLVG + +   AD+VL
Sbjct: 185 IVCKPFENAFEQAFKLANINPQRTVFFDDSIRNIQTGKRMGLKTVLVGSSNRVSGADHVL 244

Query: 220 ENVNKLAQVIPEIL 233
           E+++ L + +PE+ 
Sbjct: 245 ESIHNLKEALPELW 258


>28650.m000183 catalytic, putative
          Length = 282

 Score =  233 bits (593), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 111/257 (43%), Positives = 170/257 (66%), Gaps = 23/257 (8%)

Query: 12  DCLIFDLDDTLYSSKLGIAEALRKNIDDFLVEKCGFPENKASTLRVELFKTYGSSLAGLR 71
           +CL+FD+DDTLY  + G+++ + KNI +++V+K G  E+K + L V L+K YG++LAGLR
Sbjct: 15  ECLLFDVDDTLYPLRSGLSQHVTKNIQEYMVQKLGIEESKVAELCVSLYKLYGTTLAGLR 74

Query: 72  ALGYDIDADDYHSVVHGRLPYDLIKPNGQLRNILRSITQRKIIFTNSDRVHAIKVLKRLG 131
           A+G++ID DD+HS VHGRLPYD++KP+  LRN+L S+  RKI+FTN+D+ HA +VL RLG
Sbjct: 75  AIGHNIDYDDFHSFVHGRLPYDIVKPDPVLRNLLHSLPVRKIVFTNADKTHASRVLSRLG 134

Query: 132 LEDCFDQIICFETMNPNL--SKSTRPDE---------------------FPVLLKPSMDA 168
           LEDCF+ I+ FET+N     ++S   DE                      PV+ KP  DA
Sbjct: 135 LEDCFEGILSFETLNNTTKGNESVNEDENGVFDINEYTAAPNAGLALPRSPVVCKPFEDA 194

Query: 169 MKIALQVANVDPRRTLFLDDNARNVAAGKAMGLRTVLVGKTVKSKEADYVLENVNKLAQV 228
            +   ++ +++P+RTLF DD+ RN+  GK +GL TV VG + +++  DY LE+++ + + 
Sbjct: 195 FEQVFKITSINPQRTLFFDDSIRNLQTGKRLGLTTVWVGSSHRTEGVDYALESIHNIKEA 254

Query: 229 IPEILGSGKDSGEQRIS 245
           +PE+  + + S   R S
Sbjct: 255 LPELWDANEKSDGVRYS 271


>29767.m000206 catalytic, putative
          Length = 249

 Score =  176 bits (447), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 102/237 (43%), Positives = 147/237 (62%), Gaps = 19/237 (8%)

Query: 2   DCYGKTSSP-IDCLIFDLDDTLYSSKLGIAEALRKNIDDFLVEKCGFPENKASTLRVELF 60
           D Y +   P  DCL+FDLDDTLY    GIA A  +NI D++VE  G  ++K + L   L+
Sbjct: 5   DRYLQAQRPKYDCLLFDLDDTLYPFSSGIAAACGQNIKDYMVENLGIDKSKIAELGNLLY 64

Query: 61  KTYGSSLAGLRALGYDIDADDYHSVVHGRLPYDLIKPNGQLRNILRSITQRKIIFTNSDR 120
           K YG+++AGLRA+GYD D D+YH+ VHGRLPYD +KP+  LR++L S+  RK+IFTN+D+
Sbjct: 65  KNYGTTMAGLRAIGYDFDYDEYHNYVHGRLPYDNLKPDPVLRSLLLSLPIRKVIFTNADK 124

Query: 121 VHAIKVLKRL----GLEDCFDQIICFETMNPNLSKSTRPDEFPVLLKPSMDAMKIALQVA 176
           VHA+KVL +       ++C  +   F+      S  +    F  LL   +D +  +LQ  
Sbjct: 125 VHALKVLAKXXPYQSSKNCKFKTF-FKITKLGFSYFSY---FSSLLALIIDLVA-SLQ-- 177

Query: 177 NVDPRRTLFLDDNARNVAAGKAMGLRTVLVGKTVKSKEADYVLENVNKLAQVIPEIL 233
                  LF +D+ RN+ AGK +GL TVLVG + + K ADY LE+++ L + +PE+ 
Sbjct: 178 -------LFFEDSVRNIQAGKRVGLYTVLVGTSQRVKGADYALESIHNLREAVPELW 227