Jatropha Genome Database

JcCA0044231.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0044231.30 - phase: 0 /TE/partial
         (1012 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

48288.m000018 conserved hypothetical protein                           93   8e-19
28161.m000230 conserved hypothetical protein                           59   2e-08
28327.m000350 conserved hypothetical protein                           54   4e-07
27905.m000072 conserved hypothetical protein                           51   3e-06
47936.m000017 conserved hypothetical protein                           50   7e-06

>48288.m000018 conserved hypothetical protein
          Length = 220

 Score = 92.8 bits (229), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 62/253 (24%), Positives = 121/253 (47%), Gaps = 44/253 (17%)

Query: 496 IKNSDGVWLSLQEDIGEEAVKHFSSLFQ------GEVMQQDCSQIIEYLPSLITTEHNLA 549
           ++ SD  W         +A+ +FSS+F       G +    C   ++YL S + ++    
Sbjct: 2   VQLSDDTWSMDSNFQWRDAINYFSSIFSVSYEVSGSLGISSCFSNLDYLASPVLSD---- 57

Query: 550 LGAISTDSEIKNAVWQLDPSSAPGPDGFDGRFYRDCWSIIQWDVCSTVKEFFLGLPIPQS 609
                   E+K A++++ P  +P       RF                 + F G  I   
Sbjct: 58  --------EVKGAMFKMSPMKSP-------RF----------------DDVFNGGSIDLE 86

Query: 610 FSCAQIILIPKVENPSVFDQFRPICLTN--FKVCTRILANRIAPLLDFLISPKQASFMKG 667
            +C    LIPK++ P   + FRPI L N  +K+ T+++AN +  ++  +ISP Q+S +KG
Sbjct: 87  INCTNTFLIPKMDAPESSNHFRPIILCNVTYKLITKVIANHLKIIMSKVISPMQSSIVKG 146

Query: 668 RSIHSQILLANEMIHEIGR-KARENNIAIKLDIAKAFDRVSWSFLEAVLFRFGFSQPIVX 726
           R I + I++  E++H   +  ++   + IK+D+ KA+D+++WSF+   L        ++ 
Sbjct: 147 RHIMNNIIIVKEILHLTNKMTSKTGYMVIKVDLEKAYDKLNWSFILDTLMDRSIPSGLIN 206

Query: 727 LIIANLSATRLSV 739
           +I+  +++  + +
Sbjct: 207 VIMNYITSASMQI 219


>28161.m000230 conserved hypothetical protein
          Length = 275

 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 1/125 (0%)

Query: 447 EAHLLRKLRLEEIYWKQKSHVKWLEDGDSNTKFFHNYVKLSRKFQRISSIKNSDGVWLSL 506
           EA + + LR+E+  W Q S V+W++DGD  T FFH          +I  I    G+    
Sbjct: 150 EAKITKLLRMEDTIWFQCSKVRWMQDGDRYTPFFHRKASQRNVRNKIEQILGEGGICYKG 209

Query: 507 QEDIGEEAVKHFSSLFQGEVMQQDCSQIIEYLPSLITTEHNLALGAISTDSEIKNAVWQL 566
            ++I      +F   F+  V   +  ++++ + S I+ + N  L    T  E+  A+ Q+
Sbjct: 210 DDEIARVMTDYFIDKFRS-VDPNNVHRVLDIVESRISIDMNDLLTLAYTTEEVYRALKQM 268

Query: 567 DPSSA 571
            PS A
Sbjct: 269 HPSKA 273


>28327.m000350 conserved hypothetical protein
          Length = 84

 Score = 53.9 bits (128), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 5/68 (7%)

Query: 443 WXEKEAHLLRKLRLEEIYWKQKSHVKWLEDGDSNTKFFHNYVKLSRKFQRISSIKNSDGV 502
           W EK     +++R EE++W  KS + WL+ GD N+KFFH  +   R++ +IS IK+  G 
Sbjct: 20  WREK-----KRMRQEEMFWHHKSILNWLKYGDQNSKFFHLSMIQWRQYNQISRIKSKQGR 74

Query: 503 WLSLQEDI 510
           W+   + I
Sbjct: 75  WIKGNKKI 82


>27905.m000072 conserved hypothetical protein
          Length = 186

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 20/129 (15%)

Query: 447 EAHLLRKLRLEEIYWKQKSHVKWLEDGDSNTKFFHNYVKLSRKFQRISSIKNSDGVWLSL 506
           E  L R  +LEE  W Q+S   WL+D D +T FF +     RK   I  I+   GVW   
Sbjct: 54  EIKLQRLQKLEETTWFQRSRALWLKDADKDTFFFLSKANQRRKRNIIEGIRGEGGVWY-- 111

Query: 507 QEDIGEEAVKHFSSLFQGEVMQQDCSQIIEYLPSLITTEHNLALGAISTDSEIKNAVWQL 566
              +      H        V+     +I + + S++T  +        T  +I  A+ Q+
Sbjct: 112 ---VSAPVNMH-------RVLNTTDIRITDDINSILTRSY--------TAEDIHKALKQM 153

Query: 567 DPSSAPGPD 575
             S +PGPD
Sbjct: 154 HLSKSPGPD 162


>47936.m000017 conserved hypothetical protein
          Length = 390

 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 40/81 (49%)

Query: 557 SEIKNAVWQLDPSSAPGPDGFDGRFYRDCWSIIQWDVCSTVKEFFLGLPIPQSFSCAQII 616
            EIK A++ + P  A G  GF   FY+  WSI+  ++     EF       +  +   I 
Sbjct: 107 DEIKTALFDMHPYKALGLVGFHALFYQKFWSIVGENITRECLEFLNSGVRREERNKTLIT 166

Query: 617 LIPKVENPSVFDQFRPICLTN 637
           L+PKV+ P    +FRPI L +
Sbjct: 167 LVPKVQQPQHVKEFRPIILVH 187