Jatropha Genome Database
- JcCA0044231.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0044231.20 - phase: 0
(440 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30146.m003515 pentatricopeptide repeat-containing protein, putative 501 e-142
29794.m003470 pentatricopeptide repeat-containing protein, putative 323 1e-88
28842.m000915 pentatricopeptide repeat-containing protein, putative 322 3e-88
29807.m000488 pentatricopeptide repeat-containing protein, putative 321 5e-88
30169.m006555 pentatricopeptide repeat-containing protein, putative 307 7e-84
29933.m001406 pentatricopeptide repeat-containing protein, putative 303 9e-83
29769.m000464 pentatricopeptide repeat-containing protein, putative 300 1e-81
30063.m001440 pentatricopeptide repeat-containing protein, putative 298 3e-81
30147.m014388 pentatricopeptide repeat-containing protein, putative 297 6e-81
29756.m000514 pentatricopeptide repeat-containing protein, putative 293 1e-79
28124.m000243 pentatricopeptide repeat-containing protein, putative 292 2e-79
28657.m000400 pentatricopeptide repeat-containing protein, putative 292 2e-79
28350.m000103 pentatricopeptide repeat-containing protein, putative 288 4e-78
29848.m004527 pentatricopeptide repeat-containing protein, putative 286 1e-77
30147.m014323 pentatricopeptide repeat-containing protein, putative 286 1e-77
30204.m001733 pentatricopeptide repeat-containing protein, putative 286 2e-77
29844.m003176 pentatricopeptide repeat-containing protein, putative 280 1e-75
29635.m000449 pentatricopeptide repeat-containing protein, putative 279 2e-75
30147.m013942 pentatricopeptide repeat-containing protein, putative 278 4e-75
30174.m009150 pentatricopeptide repeat-containing protein, putative 273 1e-73
28637.m000207 pentatricopeptide repeat-containing protein, putative 272 2e-73
30010.m000680 pentatricopeptide repeat-containing protein, putative 271 6e-73
28629.m000562 Bipolar kinesin KRP-130, putative 270 9e-73
30131.m006909 pentatricopeptide repeat-containing protein, putative 266 1e-71
28357.m000095 pentatricopeptide repeat-containing protein, putative 265 4e-71
29729.m002326 pentatricopeptide repeat-containing protein, putative 265 4e-71
28694.m000666 pentatricopeptide repeat-containing protein, putative 262 2e-70
30174.m009054 pentatricopeptide repeat-containing protein, putative 261 4e-70
29729.m002372 pentatricopeptide repeat-containing protein, putative 260 8e-70
27828.m000099 pentatricopeptide repeat-containing protein, putative 260 9e-70
29726.m003970 pentatricopeptide repeat-containing protein, putative 259 1e-69
30170.m014308 pentatricopeptide repeat-containing protein, putative 259 2e-69
30128.m009048 pentatricopeptide repeat-containing protein, putative 258 3e-69
29726.m003908 pentatricopeptide repeat-containing protein, putative 258 5e-69
29751.m001897 pentatricopeptide repeat-containing protein, putative 256 2e-68
29805.m001519 pentatricopeptide repeat-containing protein, putative 256 2e-68
28838.m000257 Cell division protein ftsH, putative 255 3e-68
29805.m001517 pentatricopeptide repeat-containing protein, putative 254 7e-68
29628.m000759 pentatricopeptide repeat-containing protein, putative 251 5e-67
29333.m001091 transferase, transferring glycosyl groups, putative 248 3e-66
29869.m001155 pentatricopeptide repeat-containing protein, putative 247 8e-66
29785.m000950 pentatricopeptide repeat-containing protein, putative 245 3e-65
30131.m006928 pentatricopeptide repeat-containing protein, putative 245 4e-65
29676.m001663 pentatricopeptide repeat-containing protein, putative 244 4e-65
29883.m001962 pentatricopeptide repeat-containing protein, putative 244 7e-65
29761.m000423 pentatricopeptide repeat-containing protein, putative 241 5e-64
30075.m001161 pentatricopeptide repeat-containing protein, putative 241 5e-64
29900.m001587 pentatricopeptide repeat-containing protein, putative 239 2e-63
30174.m009061 pentatricopeptide repeat-containing protein, putative 237 7e-63
29648.m001935 pentatricopeptide repeat-containing protein, putative 236 2e-62
29822.m003454 pentatricopeptide repeat-containing protein, putative 235 3e-62
29869.m001143 pentatricopeptide repeat-containing protein, putative 234 8e-62
48562.m000006 pentatricopeptide repeat-containing protein, putative 232 3e-61
29724.m000842 pentatricopeptide repeat-containing protein, putative 231 3e-61
30169.m006317 pentatricopeptide repeat-containing protein, putative 231 4e-61
30074.m001416 pentatricopeptide repeat-containing protein, putative 231 5e-61
29986.m001622 magnesium/proton exchanger, putative 229 2e-60
29736.m002020 pentatricopeptide repeat-containing protein, putative 227 7e-60
29830.m001392 pentatricopeptide repeat-containing protein, putative 226 1e-59
30128.m008933 pentatricopeptide repeat-containing protein, putative 226 2e-59
29950.m001169 pentatricopeptide repeat-containing protein, putative 225 3e-59
29938.m000602 pentatricopeptide repeat-containing protein, putative 225 4e-59
29681.m001332 pentatricopeptide repeat-containing protein, putative 223 1e-58
30128.m008775 pentatricopeptide repeat-containing protein, putative 223 2e-58
30170.m013878 pentatricopeptide repeat-containing protein, putative 222 2e-58
28649.m000213 pentatricopeptide repeat-containing protein, putative 220 1e-57
30147.m014156 pentatricopeptide repeat-containing protein, putative 219 2e-57
29584.m000246 basic helix-loop-helix-containingprotein, putative 219 2e-57
30115.m001175 pentatricopeptide repeat-containing protein, putative 219 3e-57
30055.m001630 pentatricopeptide repeat-containing protein, putative 217 7e-57
29093.m000079 pentatricopeptide repeat-containing protein, putative 215 4e-56
27810.m000635 DNA-damage-inducible protein f, putative 214 4e-56
30128.m008920 pentatricopeptide repeat-containing protein, putative 212 2e-55
29596.m000694 pentatricopeptide repeat-containing protein, putative 211 4e-55
29628.m000765 pentatricopeptide repeat-containing protein, putative 211 6e-55
29799.m000650 pentatricopeptide repeat-containing protein, putative 211 6e-55
29736.m002044 pentatricopeptide repeat-containing protein, putative 210 1e-54
28320.m001094 pentatricopeptide repeat-containing protein, putative 209 2e-54
28098.m000126 pentatricopeptide repeat-containing protein, putative 209 2e-54
29635.m000454 pentatricopeptide repeat-containing protein, putative 209 2e-54
29676.m001697 pentatricopeptide repeat-containing protein, putative 208 4e-54
29742.m001368 pentatricopeptide repeat-containing protein, putative 207 8e-54
30131.m007153 pentatricopeptide repeat-containing protein, putative 207 1e-53
29841.m002890 pentatricopeptide repeat-containing protein, putative 206 2e-53
29634.m002120 pentatricopeptide repeat-containing protein, putative 206 2e-53
30147.m014093 pentatricopeptide repeat-containing protein, putative 203 1e-52
29970.m001006 pentatricopeptide repeat-containing protein, putative 202 3e-52
29751.m001893 pentatricopeptide repeat-containing protein, putative 200 9e-52
29904.m002919 pentatricopeptide repeat-containing protein, putative 199 3e-51
28256.m000142 pentatricopeptide repeat-containing protein, putative 196 1e-50
29598.m000467 pentatricopeptide repeat-containing protein, putative 196 2e-50
29889.m003395 pentatricopeptide repeat-containing protein, putative 195 4e-50
30170.m014235 pentatricopeptide repeat-containing protein, putative 194 5e-50
28619.m000046 pentatricopeptide repeat-containing protein, putative 194 7e-50
30174.m008625 pentatricopeptide repeat-containing protein, putative 193 1e-49
29811.m000535 pentatricopeptide repeat-containing protein, putative 192 2e-49
29598.m000463 pentatricopeptide repeat-containing protein, putative 191 5e-49
29726.m004020 pentatricopeptide repeat-containing protein, putative 191 7e-49
27660.m000082 pentatricopeptide repeat-containing protein, putative 189 3e-48
29848.m004644 pentatricopeptide repeat-containing protein, putative 188 4e-48
28962.m000446 pentatricopeptide repeat-containing protein, putative 186 2e-47
30174.m008766 pentatricopeptide repeat-containing protein, putative 186 2e-47
30204.m001799 pentatricopeptide repeat-containing protein, putative 185 4e-47
30063.m001410 pentatricopeptide repeat-containing protein, putative 185 4e-47
27837.m000163 pentatricopeptide repeat-containing protein, putative 183 1e-46
30174.m009141 pentatricopeptide repeat-containing protein, putative 183 1e-46
29597.m000283 pentatricopeptide repeat-containing protein, putative 182 2e-46
28448.m000361 pentatricopeptide repeat-containing protein, putative 182 3e-46
30147.m013867 pentatricopeptide repeat-containing protein, putative 182 3e-46
28470.m000433 pentatricopeptide repeat-containing protein, putative 181 5e-46
29841.m002889 pentatricopeptide repeat-containing protein, putative 181 6e-46
29830.m001393 pentatricopeptide repeat-containing protein, putative 179 2e-45
30147.m014128 pentatricopeptide repeat-containing protein, putative 179 2e-45
29813.m001493 pentatricopeptide repeat-containing protein, putative 179 3e-45
29742.m001443 pentatricopeptide repeat-containing protein, putative 178 4e-45
30169.m006579 pentatricopeptide repeat-containing protein, putative 178 5e-45
29851.m002415 pentatricopeptide repeat-containing protein, putative 177 7e-45
29813.m001482 pentatricopeptide repeat-containing protein, putative 177 8e-45
29820.m001036 pentatricopeptide repeat-containing protein, putative 176 1e-44
29844.m003191 pentatricopeptide repeat-containing protein, putative 174 7e-44
28629.m000556 pentatricopeptide repeat-containing protein, putative 174 8e-44
29844.m003243 pentatricopeptide repeat-containing protein, putative 172 3e-43
30147.m014400 pentatricopeptide repeat-containing protein, putative 171 4e-43
30174.m008876 pentatricopeptide repeat-containing protein, putative 171 4e-43
30174.m008866 pentatricopeptide repeat-containing protein, putative 171 5e-43
27732.m000283 pentatricopeptide repeat-containing protein, putative 171 6e-43
29648.m001934 pentatricopeptide repeat-containing protein, putative 171 9e-43
30174.m008973 pentatricopeptide repeat-containing protein, putative 170 1e-42
27446.m000498 pentatricopeptide repeat-containing protein, putative 170 1e-42
29761.m000430 pentatricopeptide repeat-containing protein, putative 169 2e-42
29854.m001091 pentatricopeptide repeat-containing protein, putative 169 3e-42
30147.m014375 pentatricopeptide repeat-containing protein, putative 168 4e-42
29685.m000500 pentatricopeptide repeat-containing protein, putative 168 5e-42
30032.m000454 pentatricopeptide repeat-containing protein, putative 168 5e-42
29632.m000078 pentatricopeptide repeat-containing protein, putative 167 1e-41
30178.m000869 pentatricopeptide repeat-containing protein, putative 166 2e-41
30147.m014385 pentatricopeptide repeat-containing protein, putative 165 3e-41
28672.m000057 pentatricopeptide repeat-containing protein, putative 165 5e-41
30138.m003882 pentatricopeptide repeat-containing protein, putative 164 5e-41
29844.m003272 pentatricopeptide repeat-containing protein, putative 163 1e-40
28097.m000054 pentatricopeptide repeat-containing protein, putative 163 2e-40
29676.m001642 pentatricopeptide repeat-containing protein, putative 163 2e-40
27985.m000891 pentatricopeptide repeat-containing protein, putative 163 2e-40
30131.m006999 pentatricopeptide repeat-containing protein, putative 162 3e-40
29953.m000441 pentatricopeptide repeat-containing protein, putative 162 3e-40
29739.m003641 pentatricopeptide repeat-containing protein, putative 162 4e-40
30146.m003562 pentatricopeptide repeat-containing protein, putative 160 1e-39
27810.m000670 pentatricopeptide repeat-containing protein, putative 160 1e-39
29805.m001533 pentatricopeptide repeat-containing protein, putative 160 1e-39
30138.m004056 pentatricopeptide repeat-containing protein, putative 160 1e-39
29765.m000741 pentatricopeptide repeat-containing protein, putative 159 3e-39
30156.m001722 pentatricopeptide repeat-containing protein, putative 158 5e-39
30147.m013888 pentatricopeptide repeat-containing protein, putative 158 5e-39
29769.m000453 pentatricopeptide repeat-containing protein, putative 157 9e-39
29646.m001096 pentatricopeptide repeat-containing protein, putative 156 2e-38
27996.m000150 pentatricopeptide repeat-containing protein, putative 156 2e-38
30129.m000359 pentatricopeptide repeat-containing protein, putative 156 2e-38
30162.m001294 pentatricopeptide repeat-containing protein, putative 156 2e-38
30138.m004037 pentatricopeptide repeat-containing protein, putative 156 2e-38
28193.m000297 pentatricopeptide repeat-containing protein, putative 155 2e-38
29482.m000172 pentatricopeptide repeat-containing protein, putative 155 3e-38
30128.m008544 pentatricopeptide repeat-containing protein, putative 154 6e-38
29983.m003289 pentatricopeptide repeat-containing protein, putative 154 7e-38
27985.m000873 pentatricopeptide repeat-containing protein, putative 154 1e-37
30157.m000797 pentatricopeptide repeat-containing protein, putative 154 1e-37
30128.m008954 pentatricopeptide repeat-containing protein, putative 153 1e-37
28644.m000922 pentatricopeptide repeat-containing protein, putative 153 2e-37
30055.m001631 pentatricopeptide repeat-containing protein, putative 152 3e-37
29761.m000418 pentatricopeptide repeat-containing protein, putative 152 4e-37
30068.m002662 GTP-binding protein alpha subunit, gna, putative 151 5e-37
30026.m001450 pentatricopeptide repeat-containing protein, putative 150 9e-37
29630.m000788 pentatricopeptide repeat-containing protein, putative 150 1e-36
29724.m000862 pentatricopeptide repeat-containing protein, putative 150 2e-36
30147.m013753 pentatricopeptide repeat-containing protein, putative 148 4e-36
30190.m010934 pentatricopeptide repeat-containing protein, putative 148 5e-36
29615.m000493 pentatricopeptide repeat-containing protein, putative 148 5e-36
29904.m003059 pentatricopeptide repeat-containing protein, putative 148 5e-36
29912.m005452 pentatricopeptide repeat-containing protein, putative 148 5e-36
29929.m004593 pentatricopeptide repeat-containing protein, putative 148 5e-36
30098.m001706 pentatricopeptide repeat-containing protein, putative 147 8e-36
29763.m000190 pentatricopeptide repeat-containing protein, putative 147 1e-35
30059.m000463 pentatricopeptide repeat-containing protein, putative 147 1e-35
30147.m014125 pentatricopeptide repeat-containing protein, putative 146 2e-35
30128.m008934 pentatricopeptide repeat-containing protein, putative 145 3e-35
29851.m002437 pentatricopeptide repeat-containing protein, putative 145 3e-35
28644.m000920 pentatricopeptide repeat-containing protein, putative 145 3e-35
29686.m000882 pentatricopeptide repeat-containing protein, putative 145 4e-35
30170.m014105 pentatricopeptide repeat-containing protein, putative 145 4e-35
29981.m000602 pentatricopeptide repeat-containing protein, putative 145 5e-35
28196.m000203 pentatricopeptide repeat-containing protein, putative 145 5e-35
29681.m001372 pentatricopeptide repeat-containing protein, putative 145 5e-35
30155.m001641 pentatricopeptide repeat-containing protein, putative 143 1e-34
29957.m001429 pentatricopeptide repeat-containing protein, putative 142 2e-34
30138.m003853 pentatricopeptide repeat-containing protein, putative 142 3e-34
29992.m001416 pentatricopeptide repeat-containing protein, putative 142 3e-34
30055.m001535 pentatricopeptide repeat-containing protein, putative 141 5e-34
29813.m001452 pentatricopeptide repeat-containing protein, putative 141 6e-34
29751.m001864 pentatricopeptide repeat-containing protein, putative 141 7e-34
30174.m009151 pentatricopeptide repeat-containing protein, putative 140 2e-33
29585.m000598 pentatricopeptide repeat-containing protein, putative 139 3e-33
45882.m000013 pentatricopeptide repeat-containing protein, putative 138 5e-33
29693.m002080 pentatricopeptide repeat-containing protein, putative 138 5e-33
29736.m002025 pentatricopeptide repeat-containing protein, putative 138 6e-33
30128.m008587 pentatricopeptide repeat-containing protein, putative 137 1e-32
30138.m004070 pentatricopeptide repeat-containing protein, putative 137 1e-32
30169.m006451 pentatricopeptide repeat-containing protein, putative 136 2e-32
29801.m003177 pentatricopeptide repeat-containing protein, putative 136 2e-32
29631.m001012 pentatricopeptide repeat-containing protein, putative 135 3e-32
30147.m014512 pentatricopeptide repeat-containing protein, putative 135 3e-32
29794.m003469 pentatricopeptide repeat-containing protein, putative 135 4e-32
29807.m000472 pentatricopeptide repeat-containing protein, putative 135 4e-32
29757.m000711 pentatricopeptide repeat-containing protein, putative 135 5e-32
29736.m002059 pentatricopeptide repeat-containing protein, putative 134 6e-32
29983.m003251 pentatricopeptide repeat-containing protein, putative 134 1e-31
28196.m000208 pentatricopeptide repeat-containing protein, putative 132 2e-31
30174.m008630 pentatricopeptide repeat-containing protein, putative 132 4e-31
30169.m006528 pentatricopeptide repeat-containing protein, putative 132 4e-31
29841.m002773 pentatricopeptide repeat-containing protein, putative 131 5e-31
27538.m000322 pentatricopeptide repeat-containing protein, putative 131 5e-31
29912.m005398 pentatricopeptide repeat-containing protein, putative 130 1e-30
29950.m001146 pentatricopeptide repeat-containing protein, putative 129 2e-30
29844.m003278 pentatricopeptide repeat-containing protein, putative 129 2e-30
29751.m001865 pentatricopeptide repeat-containing protein, putative 129 2e-30
29825.m000324 pentatricopeptide repeat-containing protein, putative 127 1e-29
28859.m000320 pentatricopeptide repeat-containing protein, putative 127 1e-29
29737.m001266 pentatricopeptide repeat-containing protein, putative 126 2e-29
29801.m003061 pentatricopeptide repeat-containing protein, putative 126 2e-29
29912.m005392 pentatricopeptide repeat-containing protein, putative 125 3e-29
30147.m014200 pentatricopeptide repeat-containing protein, putative 125 6e-29
29634.m002110 pentatricopeptide repeat-containing protein, putative 124 1e-28
30190.m011319 pentatricopeptide repeat-containing protein, putative 124 1e-28
29801.m003193 pentatricopeptide repeat-containing protein, putative 123 2e-28
30128.m008896 pentatricopeptide repeat-containing protein, putative 122 4e-28
29680.m001729 pentatricopeptide repeat-containing protein, putative 121 5e-28
30170.m014304 pentatricopeptide repeat-containing protein, putative 120 1e-27
29825.m000331 pentatricopeptide repeat-containing protein, putative 120 1e-27
30131.m006988 pentatricopeptide repeat-containing protein, putative 119 3e-27
29908.m005965 pentatricopeptide repeat-containing protein, putative 118 7e-27
30131.m006940 pentatricopeptide repeat-containing protein, putative 113 2e-25
29726.m004047 pentatricopeptide repeat-containing protein, putative 112 4e-25
28320.m001118 pentatricopeptide repeat-containing protein, putative 108 5e-24
29691.m000280 pentatricopeptide repeat-containing protein, putative 108 6e-24
30169.m006320 pentatricopeptide repeat-containing protein, putative 107 8e-24
29736.m002066 pentatricopeptide repeat-containing protein, putative 107 9e-24
27985.m000884 pentatricopeptide repeat-containing protein, putative 107 1e-23
29815.m000490 pentatricopeptide repeat-containing protein, putative 106 2e-23
30170.m013985 pentatricopeptide repeat-containing protein, putative 105 5e-23
29938.m000599 pentatricopeptide repeat-containing protein, putative 105 6e-23
30076.m004632 pentatricopeptide repeat-containing protein, putative 104 7e-23
29235.m000239 pentatricopeptide repeat-containing protein, putative 103 1e-22
30148.m001435 pentatricopeptide repeat-containing protein, putative 103 2e-22
30008.m000805 pentatricopeptide repeat-containing protein, putative 102 3e-22
29813.m001459 pentatricopeptide repeat-containing protein, putative 101 6e-22
30147.m014417 pentatricopeptide repeat-containing protein, putative 101 7e-22
30155.m001644 pentatricopeptide repeat-containing protein, putative 101 8e-22
29851.m002482 pentatricopeptide repeat-containing protein, putative 100 2e-21
29848.m004530 pentatricopeptide repeat-containing protein, putative 98 1e-20
30008.m000809 pentatricopeptide repeat-containing protein, putative 97 1e-20
30073.m002218 pentatricopeptide repeat-containing protein, putative 97 2e-20
28331.m000093 pentatricopeptide repeat-containing protein, putative 96 3e-20
29780.m001341 pentatricopeptide repeat-containing protein, putative 96 4e-20
29092.m000445 pentatricopeptide repeat-containing protein, putative 96 4e-20
27847.m000123 pentatricopeptide repeat-containing protein, putative 93 2e-19
29801.m003071 pentatricopeptide repeat-containing protein, putative 93 2e-19
29889.m003262 pentatricopeptide repeat-containing protein, putative 93 3e-19
30174.m008794 pentatricopeptide repeat-containing protein, putative 92 4e-19
29912.m005510 pentatricopeptide repeat-containing protein, putative 92 5e-19
30148.m001471 pentatricopeptide repeat-containing protein, putative 91 8e-19
29629.m001406 pentatricopeptide repeat-containing protein, putative 91 1e-18
29938.m000600 pentatricopeptide repeat-containing protein, putative 91 1e-18
27965.m000110 pentatricopeptide repeat-containing protein, putative 91 1e-18
29698.m000065 pentatricopeptide repeat-containing protein, putative 90 2e-18
30128.m008833 pentatricopeptide repeat-containing protein, putative 90 2e-18
29929.m004578 pentatricopeptide repeat-containing protein, putative 90 2e-18
30147.m014124 pentatricopeptide repeat-containing protein, putative 90 2e-18
30054.m000814 pentatricopeptide repeat-containing protein, putative 89 3e-18
30006.m000281 pentatricopeptide repeat-containing protein, putative 89 3e-18
30063.m001431 pentatricopeptide repeat-containing protein, putative 89 4e-18
30073.m002249 pentatricopeptide repeat-containing protein, putative 89 5e-18
30147.m014237 pentatricopeptide repeat-containing protein, putative 88 9e-18
30147.m014027 pentatricopeptide repeat-containing protein, putative 88 9e-18
29673.m000946 pentatricopeptide repeat-containing protein, putative 87 1e-17
29811.m000547 pentatricopeptide repeat-containing protein, putative 87 1e-17
29983.m003250 pentatricopeptide repeat-containing protein, putative 87 2e-17
30156.m001751 pentatricopeptide repeat-containing protein, putative 87 2e-17
29844.m003246 pentatricopeptide repeat-containing protein, putative 86 3e-17
29680.m001697 pentatricopeptide repeat-containing protein, putative 86 4e-17
29742.m001366 pentatricopeptide repeat-containing protein, putative 86 4e-17
29923.m000800 pentatricopeptide repeat-containing protein, putative 86 4e-17
29596.m000698 pentatricopeptide repeat-containing protein, putative 85 7e-17
29848.m004666 pentatricopeptide repeat-containing protein, putative 85 9e-17
28094.m000179 pentatricopeptide repeat-containing protein, putative 84 9e-17
27516.m000172 pentatricopeptide repeat-containing protein, putative 84 1e-16
29827.m002618 pentatricopeptide repeat-containing protein, putative 84 1e-16
29852.m001986 pentatricopeptide repeat-containing protein, putative 83 2e-16
30161.m000098 pentatricopeptide repeat-containing protein, putative 82 4e-16
30138.m003894 pentatricopeptide repeat-containing protein, putative 82 4e-16
29709.m001194 pentatricopeptide repeat-containing protein, putative 81 8e-16
29660.m000783 pentatricopeptide repeat-containing protein, putative 81 9e-16
29977.m000250 pentatricopeptide repeat-containing protein, putative 81 9e-16
29889.m003339 pentatricopeptide repeat-containing protein, putative 81 1e-15
30055.m001579 pentatricopeptide repeat-containing protein, putative 80 1e-15
30128.m008907 pentatricopeptide repeat-containing protein, putative 80 1e-15
28226.m000849 pentatricopeptide repeat-containing protein, putative 80 2e-15
29872.m000549 pentatricopeptide repeat-containing protein, putative 80 2e-15
30024.m001715 pentatricopeptide repeat-containing protein, putative 80 2e-15
29597.m000286 pentatricopeptide repeat-containing protein, putative 80 3e-15
30128.m008660 pentatricopeptide repeat-containing protein, putative 80 3e-15
30008.m000823 pentatricopeptide repeat-containing protein, putative 80 3e-15
29792.m000620 pentatricopeptide repeat-containing protein, putative 79 3e-15
30006.m000285 pentatricopeptide repeat-containing protein, putative 79 3e-15
27451.m000250 pentatricopeptide repeat-containing protein, putative 79 5e-15
29636.m000746 pentatricopeptide repeat-containing protein, putative 78 7e-15
27904.m000215 pentatricopeptide repeat-containing protein, putative 78 8e-15
30024.m001738 pentatricopeptide repeat-containing protein, putative 78 1e-14
30073.m002219 pentatricopeptide repeat-containing protein, putative 77 1e-14
29830.m001410 pentatricopeptide repeat-containing protein, putative 77 2e-14
29822.m003450 pentatricopeptide repeat-containing protein, putative 77 2e-14
30028.m000244 pentatricopeptide repeat-containing protein, putative 77 2e-14
30147.m014056 pentatricopeptide repeat-containing protein, putative 76 2e-14
30198.m000848 pentatricopeptide repeat-containing protein, putative 76 3e-14
29827.m002662 pentatricopeptide repeat-containing protein, putative 76 3e-14
29842.m003590 pentatricopeptide repeat-containing protein, putative 75 6e-14
29841.m002834 pentatricopeptide repeat-containing protein, putative 75 7e-14
30054.m000823 pentatricopeptide repeat-containing protein, putative 74 1e-13
30138.m004047 pentatricopeptide repeat-containing protein, putative 74 1e-13
29491.m000089 pentatricopeptide repeat-containing protein, putative 74 1e-13
30169.m006372 pentatricopeptide repeat-containing protein, putative 74 1e-13
29686.m000888 pentatricopeptide repeat-containing protein, putative 74 2e-13
30182.m000133 pentatricopeptide repeat-containing protein, putative 74 2e-13
30146.m003491 pentatricopeptide repeat-containing protein, putative 73 3e-13
28693.m000105 pentatricopeptide repeat-containing protein, putative 73 3e-13
28196.m000206 pentatricopeptide repeat-containing protein, putative 72 4e-13
29788.m000320 pentatricopeptide repeat-containing protein, putative 72 4e-13
29999.m000210 pentatricopeptide repeat-containing protein, putative 72 6e-13
28359.m000273 pentatricopeptide repeat-containing protein, putative 71 9e-13
29491.m000090 pentatricopeptide repeat-containing protein, putative 71 1e-12
29805.m001488 pentatricopeptide repeat-containing protein, putative 71 1e-12
28208.m000061 pentatricopeptide repeat-containing protein, putative 70 2e-12
29428.m000332 pentatricopeptide repeat-containing protein, putative 70 2e-12
29767.m000203 pentatricopeptide repeat-containing protein, putative 70 2e-12
29496.m000143 pentatricopeptide repeat-containing protein, putative 70 2e-12
29726.m003999 pentatricopeptide repeat-containing protein, putative 70 3e-12
29623.m000323 pentatricopeptide repeat-containing protein, putative 70 3e-12
29830.m001458 pentatricopeptide repeat-containing protein, putative 70 3e-12
29929.m004737 pentatricopeptide repeat-containing protein, putative 70 3e-12
28859.m000329 pentatricopeptide repeat-containing protein, putative 69 3e-12
29806.m000934 pentatricopeptide repeat-containing protein, putative 69 4e-12
29680.m001696 pentatricopeptide repeat-containing protein, putative 69 5e-12
29842.m003699 pentatricopeptide repeat-containing protein, putative 67 2e-11
30071.m000449 pentatricopeptide repeat-containing protein, putative 67 2e-11
30064.m000493 pentatricopeptide repeat-containing protein, putative 66 4e-11
30170.m014350 pentatricopeptide repeat-containing protein, putative 65 4e-11
30147.m014017 pentatricopeptide repeat-containing protein, putative 65 5e-11
29938.m000593 pentatricopeptide repeat-containing protein, putative 65 5e-11
29994.m000449 pentatricopeptide repeat-containing protein, putative 65 6e-11
29805.m001500 pentatricopeptide repeat-containing protein, putative 65 6e-11
29917.m001989 pentatricopeptide repeat-containing protein, putative 65 6e-11
29648.m001987 pentatricopeptide repeat-containing protein, putative 65 8e-11
29864.m001455 pentatricopeptide repeat-containing protein, putative 64 1e-10
27401.m000283 pentatricopeptide repeat-containing protein, putative 64 1e-10
30174.m008664 pentatricopeptide repeat-containing protein, putative 64 2e-10
29889.m003387 pentatricopeptide repeat-containing protein, putative 63 2e-10
29842.m003697 pentatricopeptide repeat-containing protein, putative 63 2e-10
30114.m000527 pentatricopeptide repeat-containing protein, putative 63 2e-10
30059.m000468 pentatricopeptide repeat-containing protein, putative 63 2e-10
29801.m003222 pentatricopeptide repeat-containing protein, putative 63 3e-10
29901.m000417 pentatricopeptide repeat-containing protein, putative 63 4e-10
29794.m003499 pentatricopeptide repeat-containing protein, putative 62 4e-10
29883.m002012 pentatricopeptide repeat-containing protein, putative 62 4e-10
29794.m003453 pentatricopeptide repeat-containing protein, putative 62 4e-10
29825.m000330 pentatricopeptide repeat-containing protein, putative 62 5e-10
29475.m000234 pentatricopeptide repeat-containing protein, putative 62 6e-10
28331.m000092 hypothetical protein 62 6e-10
29844.m003183 pentatricopeptide repeat-containing protein, putative 62 6e-10
29904.m002909 pentatricopeptide repeat-containing protein, putative 62 7e-10
30076.m004577 hypothetical protein 61 8e-10
30161.m000099 pentatricopeptide repeat-containing protein, putative 61 9e-10
30170.m014058 pentatricopeptide repeat-containing protein, putative 61 1e-09
29841.m002860 pentatricopeptide repeat-containing protein, putative 61 1e-09
28196.m000212 pentatricopeptide repeat-containing protein, putative 60 3e-09
30076.m004495 pentatricopeptide repeat-containing protein, putative 59 3e-09
30190.m011259 pentatricopeptide repeat-containing protein, putative 59 4e-09
29670.m000145 pentatricopeptide repeat-containing protein, putative 59 4e-09
29333.m001076 pentatricopeptide repeat-containing protein, putative 59 5e-09
29633.m000909 pentatricopeptide repeat-containing protein, putative 59 6e-09
28312.m000127 pentatricopeptide repeat-containing protein, putative 58 1e-08
29938.m000594 pentatricopeptide repeat-containing protein, putative 57 2e-08
30108.m000239 pentatricopeptide repeat-containing protein, putative 56 3e-08
54388.m000019 pentatricopeptide repeat-containing protein, putative 56 3e-08
30142.m000638 pentatricopeptide repeat-containing protein, putative 56 4e-08
29831.m000053 pentatricopeptide repeat-containing protein, putative 56 4e-08
29780.m001348 pentatricopeptide repeat-containing protein, putative 55 5e-08
30142.m000640 pentatricopeptide repeat-containing protein, putative 55 5e-08
29982.m000219 pentatricopeptide repeat-containing protein, putative 55 6e-08
27446.m000483 pentatricopeptide repeat-containing protein, putative 55 6e-08
29630.m000783 pentatricopeptide repeat-containing protein, putative 55 9e-08
29813.m001458 pentatricopeptide repeat-containing protein, putative 54 1e-07
30000.m000386 pentatricopeptide repeat-containing protein, putative 54 1e-07
29654.m000302 pentatricopeptide repeat-containing protein, putative 54 1e-07
29938.m000597 pentatricopeptide repeat-containing protein, putative 54 1e-07
29648.m002002 pentatricopeptide repeat-containing protein, putative 54 1e-07
28649.m000215 pentatricopeptide repeat-containing protein, putative 54 2e-07
29827.m002556 pentatricopeptide repeat-containing protein, putative 53 3e-07
30131.m007034 pentatricopeptide repeat-containing protein, putative 53 3e-07
29950.m001175 pentatricopeptide repeat-containing protein, putative 53 3e-07
54388.m000018 pentatricopeptide repeat-containing protein, putative 53 3e-07
29680.m001750 pentatricopeptide repeat-containing protein, putative 53 3e-07
30147.m013743 pentatricopeptide repeat-containing protein, putative 53 3e-07
27904.m000216 pentatricopeptide repeat-containing protein, putative 53 4e-07
29629.m001399 conserved hypothetical protein 52 5e-07
29915.m000471 pentatricopeptide repeat-containing protein, putative 52 5e-07
29904.m002908 pentatricopeptide repeat-containing protein, putative 52 5e-07
27934.m000193 pentatricopeptide repeat-containing protein, putative 52 6e-07
30131.m007253 pentatricopeptide repeat-containing protein, putative 52 6e-07
29977.m000259 pentatricopeptide repeat-containing protein, putative 50 2e-06
29647.m002095 pentatricopeptide repeat-containing protein, putative 50 2e-06
28166.m001064 pentatricopeptide repeat-containing protein, putative 49 4e-06
29912.m005457 hypothetical protein 49 5e-06
30122.m000350 pentatricopeptide repeat-containing protein, putative 49 5e-06
29739.m003594 pentatricopeptide repeat-containing protein, putative 49 6e-06
>30146.m003515 pentatricopeptide repeat-containing protein, putative
Length = 546
Score = 501 bits (1289), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/305 (78%), Positives = 271/305 (88%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML+VGVFPD+LT+PFL KASA LLKRELG +IH +I K G+ESDRF+SNSL+HMY+SF D
Sbjct: 105 MLKVGVFPDYLTYPFLVKASARLLKRELGFSIHAHIIKHGFESDRFISNSLVHMYASFGD 164
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I AR VFDG+PVKNLVSWNSM+DG AKCG++ +ARQ+FDLMP++DVLSWS LIDGYV+
Sbjct: 165 ISCARYVFDGMPVKNLVSWNSMVDGSAKCGNMVLARQLFDLMPDRDVLSWSSLIDGYVKN 224
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
GDY +A+ VF++MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN+LPLTLVL
Sbjct: 225 GDYGDAMVVFDKMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNKLPLTLVLC 284
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
TSLVDMYAKCGAI EA VFR + SDV +WN+MIGG A HGLVKESLDLF EM+ VG
Sbjct: 285 TSLVDMYAKCGAINEAFDVFRGIPAELSDVLLWNAMIGGLATHGLVKESLDLFKEMNFVG 344
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
VKPDEITYL+LL ACAHGGLVKEAWYFFDCLGK+GMT K EHYAC+VDVMARAGQ+A+AY
Sbjct: 345 VKPDEITYLSLLHACAHGGLVKEAWYFFDCLGKHGMTLKIEHYACIVDVMARAGQIAKAY 404
Query: 301 QFLCQ 305
QFL +
Sbjct: 405 QFLSR 409
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 195/415 (46%), Gaps = 75/415 (18%)
Query: 73 VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEE 132
V ++S++++ D G+I+ + V + + +W+ +I GY + + + +++VF +
Sbjct: 49 VSKILSFSALSDS----GNINYSCWVLFSLLNPTIFNWNTVIRGYSKSKNPNGSISVFIQ 104
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
M G P+ +T ++ A A L + G +H ++I + + SLV MYA G
Sbjct: 105 MLKVGVFPDYLTYPFLVKASARLLKRELGFSIHAHIIKHGFESDRFISNSLVHMYASFGD 164
Query: 193 IQEALHVFRS-----------------------------GLMKPSDVFIWNSMIGGFACH 223
I A +VF LM DV W+S+I G+ +
Sbjct: 165 ISCARYVFDGMPVKNLVSWNSMVDGSAKCGNMVLARQLFDLMPDRDVLSWSSLIDGYVKN 224
Query: 224 GLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHY 283
G +++ +F +M + G KP+E+T +++L ACAH G + + + N +
Sbjct: 225 GDYGDAMVVFDKMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNKLPLTLVLC 284
Query: 284 ACMVDVMARAGQVAEAYQFLCQIPIQPTASML-GALLNGCMNHG----KLDLAET---VG 335
+VD+ A+ G + EA+ IP + + +L A++ G HG LDL + VG
Sbjct: 285 TSLVDMYAKCGAINEAFDVFRGIPAELSDVLLWNAMIGGLATHGLVKESLDLFKEMNFVG 344
Query: 336 RKLIELE-----------------------------PHQDGRYVGLSNVYAIFRRWDKA- 365
K E+ + Y + +V A + KA
Sbjct: 345 VKPDEITYLSLLHACAHGGLVKEAWYFFDCLGKHGMTLKIEHYACIVDVMARAGQIAKAY 404
Query: 366 ----RSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIV 416
R+MR+AMERMGV+KSPGYSFV ++ +LHRF+AHDK+HPSSE IYMML FI+
Sbjct: 405 QFLSRNMRKAMERMGVRKSPGYSFVAINESLHRFIAHDKTHPSSELIYMMLSFII 459
>29794.m003470 pentatricopeptide repeat-containing protein, putative
Length = 517
Score = 323 bits (828), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 158/423 (37%), Positives = 254/423 (60%), Gaps = 6/423 (1%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
+ PD TFPF+ KA A L LG +H K G +S N+LI MY+ ++ +A
Sbjct: 91 ILPDEFTFPFVVKACARLGLHNLGKQVHAQFFKFGKKSHLITENALIDMYTKCDNLLDAH 150
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
+FD + + +SWN ++ G+ + G + AR +FD MP + ++SW+ +I GY R G Y +
Sbjct: 151 NLFDEMHERGAISWNGIISGHVRLGQMRRARALFDEMPNRTIVSWTAIISGYTRIGSYID 210
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
AL VF EM+++G +P+E +++SVL ACA LGAL+ G+ +H + N L + +L++
Sbjct: 211 ALDVFREMQIAGIEPDEASIISVLPACAKLGALETGKWIHMFCARNGLLRRTCICNALIE 270
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MY KCG I +A +F M+ DV W++MIGG A HG V+E++ +F M +KP+
Sbjct: 271 MYTKCGCIDQACQLFDQ--MRGRDVISWSTMIGGLANHGKVREAIAIFERMKQTNIKPNG 328
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLC 304
IT++ LLSACAH G +E +FD + K+ + P+ EHY +VD++ RAG++++A +
Sbjct: 329 ITFVGLLSACAHAGFWEEGLMYFDTMKKDFHIEPEIEHYGSLVDLLGRAGRLSQALDIVE 388
Query: 305 QIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDK 364
++P++P + + G+LL+ C H +++A L ELEP G YV LSN+YA +WD
Sbjct: 389 KMPMKPDSKIWGSLLSSCRTHCNIEVAVIAMEHLEELEPDDTGNYVLLSNIYADLGKWDD 448
Query: 365 ARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM---KH 421
MR+ + +KK+PG S +E++ FV+ D S P S++I+ +L + KH
Sbjct: 449 VSRMRKLVRSKRMKKTPGCSLIEVNNVAQEFVSGDDSKPYSKEIFWLLELLAFHQDMDKH 508
Query: 422 IVD 424
I++
Sbjct: 509 ILE 511
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 113/250 (45%), Gaps = 35/250 (14%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ PD + + A A L E G IH + + G + N+LI MY+ I A
Sbjct: 222 GIEPDEASIISVLPACAKLGALETGKWIHMFCARNGLLRRTCICNALIEMYTKCGCIDQA 281
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
++FD + ++++SW++M+ G A G +
Sbjct: 282 CQLFDQMRGRDVISWSTMIGGLANHGKVR------------------------------- 310
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV-IDNELPLTLVLRTSL 183
EA+A+FE M+ + KPN +T V +L ACAH G ++G M + D + + SL
Sbjct: 311 EAIAIFERMKQTNIKPNGITFVGLLSACAHAGFWEEGLMYFDTMKKDFHIEPEIEHYGSL 370
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
VD+ + G + +AL + MKP D IW S++ H ++ + + + H+ ++P
Sbjct: 371 VDLLGRAGRLSQALDIVEKMPMKP-DSKIWGSLLSSCRTHCNIE--VAVIAMEHLEELEP 427
Query: 244 DEITYLNLLS 253
D+ LLS
Sbjct: 428 DDTGNYVLLS 437
>28842.m000915 pentatricopeptide repeat-containing protein, putative
Length = 538
Score = 322 bits (824), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 175/416 (42%), Positives = 255/416 (61%), Gaps = 6/416 (1%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD +FPF KA L + GL H + G S V SLI MYSS I +ARK+
Sbjct: 108 PDSYSFPFALKAVIRLSATKTGLQFHSQAIRFGLHSHLHVLVSLIRMYSS-SHISDARKL 166
Query: 68 FDGIPV--KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
FDGIP+ +N+ WN+ML YAK D+ A+ +FD MP+++++SW+ LI GY +
Sbjct: 167 FDGIPLTARNVALWNAMLTSYAKICDMPNAQHLFDSMPQRNLISWTALISGYAHINRPHQ 226
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
A+A+F M++ P+E+T+++VL ACA LGAL+ G + +Y+ + L + L +L+D
Sbjct: 227 AIAIFRTMQLQNVVPDEITLLAVLSACAQLGALELGEWIRNYIDIHGLHRNVPLHNALID 286
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MYAK G I+ AL +F S MK + W +MI G A HGL ++L++FS M VKP+E
Sbjct: 287 MYAKSGNIKRALLIFES--MKHKTIVTWTTMIAGLALHGLGTQALEMFSRMERDRVKPNE 344
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEAYQFLC 304
IT++ +LSAC+H GLV+ A FF + + + PK EHY CM+D++ RAG + EA Q L
Sbjct: 345 ITFIAVLSACSHVGLVQLARSFFTNMRSRYTIQPKIEHYGCMIDLLGRAGYLQEAQQLLQ 404
Query: 305 QIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDK 364
Q+P +P A++ G+LL HG L E + LIELEP+ G Y LSN+YA RW
Sbjct: 405 QMPFEPNAAIWGSLLAASYTHGDAMLGERTLKHLIELEPNNSGNYALLSNIYASLGRWKA 464
Query: 365 ARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
+R +R+ M GVKK PG SF+E++ ++ F+A + SHP ++IY ++ I Q +
Sbjct: 465 SRIVRKMMRDRGVKKIPGGSFIEVNNRVNEFIAGETSHPQFDEIYEVIYKINEQSR 520
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 106/254 (41%), Gaps = 43/254 (16%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
V PD +T + A A L ELG I YI G + + N+LI MY+ +I A
Sbjct: 238 NVVPDEITLLAVLSACAQLGALELGEWIRNYIDIHGLHRNVPLHNALIDMYAKSGNIKRA 297
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
+F+ + K +V+W +M+ G A G
Sbjct: 298 LLIFESMKHKTIVTWTTMIAGLA-------------------------------LHGLGT 326
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR-----MMHHYVIDNELPLTLVL 179
+AL +F M KPNE+T ++VL AC+H+G + R M Y I ++
Sbjct: 327 QALEMFSRMERDRVKPNEITFIAVLSACSHVGLVQLARSFFTNMRSRYTIQPKIEHY--- 383
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
++D+ + G +QEA + + +P + IW S++ HG L + H++
Sbjct: 384 -GCMIDLLGRAGYLQEAQQLLQQMPFEP-NAAIWGSLLAASYTHG--DAMLGERTLKHLI 439
Query: 240 GVKPDEITYLNLLS 253
++P+ LLS
Sbjct: 440 ELEPNNSGNYALLS 453
>29807.m000488 pentatricopeptide repeat-containing protein, putative
Length = 683
Score = 321 bits (822), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 154/419 (36%), Positives = 259/419 (61%), Gaps = 7/419 (1%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ PD T A L + ELG IH Y+ + + + N+L+ MY + A
Sbjct: 234 GLMPDEATVVSTLSACTALKRLELGKKIHHYV-RDNVKFTPIIGNALLDMYCKCGCLSIA 292
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
R VF+ +P KN++ W +M+ GYA CG++ AR++F+ P +DV+ W+ +I+GYV+ +D
Sbjct: 293 RAVFEEMPSKNVICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFD 352
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
EA+A+F EM++ KP++ +VS+L CA GA+++G+ +H ++ +N +P+ V+ T+L+
Sbjct: 353 EAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALI 412
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
+MYAKCG I++AL +F ++ D W S+I G A +G ++L+LFS+M GV+PD
Sbjct: 413 EMYAKCGFIEKALEIFYG--LRVKDTASWTSIICGLAMNGKTSKALELFSKMKQAGVRPD 470
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
+IT++ +LSAC+HGGLV+E FF+ + + + PK EHY C+VD++ RAG + EA + +
Sbjct: 471 DITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIKPKVEHYGCLVDLLGRAGLLNEAEELI 530
Query: 304 CQIPIQP---TASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFR 360
+IP + T + G+LL+ C +G +++ E V ++L++ E + L+N+YA
Sbjct: 531 KKIPDENKAITVPLYGSLLSACRIYGNVEMGERVAKQLVKFESSDSSVHTLLANIYAFAD 590
Query: 361 RWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
RW+ +R M+ +GVKK+PG S +E+ +H F + SHP +IY ML + +
Sbjct: 591 RWEDVTKVRRKMKDLGVKKTPGCSSIEVDSIIHEFFSGHPSHPEMREIYYMLNIMAKPL 649
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 162/349 (46%), Gaps = 60/349 (17%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G++PD+ T+PF+ KA L + + G +TK G E D +V NSLI MY+
Sbjct: 132 GLWPDNFTYPFVFKAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVM 191
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
+ +FD +P ++++SWN M+ GY KC A VF M E+
Sbjct: 192 KMLFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCRMQEE------------------- 232
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
SG P+E T+VS L AC L L+ G+ +HHYV DN + T ++ +L+
Sbjct: 233 -----------SGLMPDEATVVSTLSACTALKRLELGKKIHHYVRDN-VKFTPIIGNALL 280
Query: 185 DMYAKCGAIQEALHVFRS-------------------GLMKPS----------DVFIWNS 215
DMY KCG + A VF G ++ + DV IW +
Sbjct: 281 DMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTA 340
Query: 216 MIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNG 275
MI G+ E++ LF EM I VKPD+ ++LL+ CA G +++ + + + +N
Sbjct: 341 MINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDENR 400
Query: 276 MTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMN 324
+ + ++++ A+ G + +A + + ++ TAS + MN
Sbjct: 401 IPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSIICGLAMN 449
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 144/324 (44%), Gaps = 42/324 (12%)
Query: 74 KNLVSWNSMLDGYAKC-----GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
+++VS N ++ A C G+++ A ++F + +L ++ +I + +KG+Y L
Sbjct: 67 QDIVSLNKLM---AFCTDPFNGNLNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLV 123
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
+F ++R G P+ T V A +LG + K + V L +R SL+DMYA
Sbjct: 124 LFSKLREDGLWPDNFTYPFVFKAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYA 183
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH-IVGVKPDEIT 247
+ +F M DV WN MI G+ ++++++F M G+ PDE T
Sbjct: 184 QLALTDVMKMLFDE--MPDRDVISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEAT 241
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYA------------CMVDVMARAGQ 295
++ LSAC L + + K HY ++D+ + G
Sbjct: 242 VVSTLSACT-------------ALKRLELGKKIHHYVRDNVKFTPIIGNALLDMYCKCGC 288
Query: 296 VAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGR-YVGLSN 354
++ A ++P + +++G N G+L+ A R+L E P +D + + N
Sbjct: 289 LSIARAVFEEMPSKNVICWT-TMVSGYANCGELEEA----RELFEGSPIRDVVIWTAMIN 343
Query: 355 VYAIFRRWDKARSMREAMERMGVK 378
Y F R+D+A ++ M+ VK
Sbjct: 344 GYVQFNRFDEAVALFREMQIRKVK 367
>30169.m006555 pentatricopeptide repeat-containing protein, putative
Length = 660
Score = 307 bits (786), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 170/488 (34%), Positives = 272/488 (55%), Gaps = 51/488 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G PD T+P + KAS+ +GL IHG + K G + + +V N LI MY +
Sbjct: 111 MYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKS 170
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCG--------------------DISMA----- 95
+ A++V D IP +++VSWNSM+ YA+ G D +MA
Sbjct: 171 LKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPA 230
Query: 96 ------------RQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEV 143
+++F + ++ V+SW+ +I YV EA+ ++ +M +G +P+ V
Sbjct: 231 VTNTTSDNVLYVKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVV 290
Query: 144 TMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSG 203
++VSVL A L AL GR +H + +L L+L +L+DMYAKCG +++A VF
Sbjct: 291 SIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQ- 349
Query: 204 LMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKE 263
M+ DV W S+I + G ++++ +F+EM G+ PD I ++++L+AC+H GL+ +
Sbjct: 350 -MQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDD 408
Query: 264 AWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCM 323
Y+F+ + + G+TPK EH+AC+VD++ RAG++ EAY F+ Q+P++P + G LL+ C
Sbjct: 409 GRYYFNLMAECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACR 468
Query: 324 NHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGY 383
+ +++ KL+ L P G YV LSN+YA RW ++R MER G+KK PG
Sbjct: 469 VYSNMNIGILAADKLLMLNPEHSGYYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGI 528
Query: 384 SFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK------------HIVDYENQEYY 431
S VE++ +H F+A D SHP S++IY L +V +MK H V+ E++EY+
Sbjct: 529 SNVELNDGVHTFLAGDHSHPQSKKIYEELDVLVGKMKELGYMPETDSALHDVEEEDKEYH 588
Query: 432 FYDNEGKL 439
+ KL
Sbjct: 589 LAVHSEKL 596
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 7/217 (3%)
Query: 46 FVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWN-----SMLDGYAKCGDISMARQVFD 100
F + + + DI +K+ + + WN ++ YA CG+ +AR +FD
Sbjct: 19 FTEDLCNRILDQYPDINTLKKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFD 78
Query: 101 LMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK 160
+ +++V+ ++ +I YV Y +AL V++ M G P+ T VL A + +L
Sbjct: 79 EITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWV 138
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
G +H V+ L L L + L+ MY KC +++EA V + DV WNSM+ +
Sbjct: 139 GLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDE--IPCRDVVSWNSMVSVY 196
Query: 221 ACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
A +G ++L+L EM + +KP++ T +LL A +
Sbjct: 197 AQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTN 233
>29933.m001406 pentatricopeptide repeat-containing protein, putative
Length = 2000
Score = 303 bits (777), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 164/422 (38%), Positives = 246/422 (58%), Gaps = 4/422 (0%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M++ G P+ F + A A + + G+ IHG++TK G+E D FVS+SLI MY +
Sbjct: 307 MIQEGFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGE 366
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ R +FD I KN+VSWN+M+ GY+ G + A+ +F++MP ++ +SWS +I G++
Sbjct: 367 TKDGRFLFDTILEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDC 426
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+DE VF EM + G PN+ T S+LCACA +LDKG+ +H ++ + +
Sbjct: 427 EQFDEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVG 486
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH-IV 239
T+L DMYAK G I+ + VF M + W +MI G A GL +ESL LF EM
Sbjct: 487 TALTDMYAKSGDIESSKKVFNR--MPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTS 544
Query: 240 GVKPDEITYLNLLSACAHGGLV-KEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAE 298
+ P+E+ +L +L AC+H GLV K WYF G+ PK H+ C+VD+++RAG++ E
Sbjct: 545 SIAPNEVMFLAVLFACSHSGLVDKGLWYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRLFE 604
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
A +F+ +P QP + ALL+GC + +LAE V KL E+ YV LSN+YA
Sbjct: 605 AEEFIYSMPFQPETNAWAALLSGCKTYKNEELAERVAGKLWEMAEKNCAGYVLLSNIYAS 664
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQ 418
RW +R+ M+ G+KKS G S+VE+ +H F + D +H S +IY +L + +
Sbjct: 665 AGRWRDVLKVRKLMKAKGLKKSGGCSWVEIRDRVHSFYSEDGAHSQSAEIYEILELLGYE 724
Query: 419 MK 420
MK
Sbjct: 725 MK 726
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 182/357 (50%), Gaps = 34/357 (9%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+L V P+ +TF + +A A L LG+++ G I K GYE D VSNSLI + +
Sbjct: 175 LLESEVKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGE 234
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I AR+VFD + K++VSW ++LD Y + ++ AR++FD MP+++ +SWS +I Y +
Sbjct: 235 IHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQS 294
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +E+L +F M G KPN S+L A A + AL G +H +V + +
Sbjct: 295 GYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVS 354
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKES----------- 229
+SL+DMY KCG ++ +F + L K ++ WN+M+GG++ +G ++E+
Sbjct: 355 SSLIDMYCKCGETKDGRFLFDTILEK--NMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRN 412
Query: 230 --------------------LDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD 269
++F+EM ++G P++ T+ +LL ACA + +
Sbjct: 413 NVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHG 472
Query: 270 CLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
+ K G+ + + D+ A++G + + + ++P + S A++ G G
Sbjct: 473 KIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEVSWT-AMIQGLAESG 528
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 163/367 (44%), Gaps = 67/367 (18%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFR----------------------------- 59
G A+H ++ K G S++++S L+ MY ++R
Sbjct: 40 GSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDFDGFDLVVHNCMISANVQ 99
Query: 60 --DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGY 117
++ ARK+FD +P N +SW +++ G+ K G + + F+ P Q+V+SW+ I GY
Sbjct: 100 RGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNPFQNVVSWTAAISGY 159
Query: 118 VRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMM----------HHY 167
V+ G EA+ +F ++ S KPN+VT SV+ ACA+LG G + H
Sbjct: 160 VQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDL 219
Query: 168 VIDNELPLTLVLR----------------------TSLVDMYAKCGAIQEALHVFRSGLM 205
+ N L +TL LR T+++D+Y + + EA +F M
Sbjct: 220 AVSNSL-ITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDE--M 276
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
+ W++MI + G +ESL LF M G KP+ + ++LSA A ++
Sbjct: 277 PQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAGM 336
Query: 266 YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNH 325
+ K G + ++D+ + G+ + +FL ++ A++ G +
Sbjct: 337 NIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDG-RFLFDTILEKNMVSWNAMVGGYSLN 395
Query: 326 GKLDLAE 332
G ++ A+
Sbjct: 396 GHMEEAK 402
>29769.m000464 pentatricopeptide repeat-containing protein, putative
Length = 491
Score = 300 bits (767), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 151/392 (38%), Positives = 241/392 (61%), Gaps = 3/392 (0%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML P++ T+ FL KA L LGLA H K G+E FV N L+HM++ F
Sbjct: 102 MLYSNFLPNNYTYSFLFKACTDLNNLYLGLACHCQSIKLGWEFYDFVQNGLVHMFAIFGC 161
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +ARK+FD +++++W ++++GY + G + + R++FD MPE++ +SWS +I GYVR
Sbjct: 162 MDSARKLFDLSSNRDVITWTALINGYVRAGQVLIGRELFDKMPERNSVSWSAMITGYVRV 221
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G ++EAL +F M +SG PN +V + ACA LGALD+GR +H Y+ N + L V+
Sbjct: 222 GFFEEALELFNAMLISGFWPNHAGIVCAINACASLGALDQGRWIHCYIKRNRMDLDRVMG 281
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+DMYAKCG I+ A +F G ++ DV ++ +I G A HG +++LF MH G
Sbjct: 282 AALIDMYAKCGCIEIACSIF--GELRNRDVHVYTCLISGLANHGQSATAVELFERMHSEG 339
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAEA 299
V P+E+T++++L+AC+ GLV + F+ + K G P+ +HY C+VD++ RAG++ EA
Sbjct: 340 VVPNEVTFVSVLNACSRMGLVDKGLRIFENMSKIYGDEPQVQHYGCLVDLLGRAGKLEEA 399
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+ + ++P++P + +LGALLN +G ++L E L +L G +V LSN+YA
Sbjct: 400 KKLVKEMPMKPDSYVLGALLNASRVYGDVELGEETVESLAQLSLDHSGVHVVLSNMYASA 459
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGA 391
+WD+ +R M V+K PG S +++ G
Sbjct: 460 NKWDEVARVRRGMGDKKVRKVPGCSLIKVDGG 491
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 108/265 (40%), Gaps = 30/265 (11%)
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
+S A ++F + + W+ +I + K + +A+ +F+ M S PN T + A
Sbjct: 61 LSHAYRLFLGLRHRSTFIWNTVIRAFAEKNEPRKAIMLFKNMLYSNFLPNNYTYSFLFKA 120
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR---------- 201
C L L G H I ++ LV M+A G + A +F
Sbjct: 121 CTDLNNLYLGLACHCQSIKLGWEFYDFVQNGLVHMFAIFGCMDSARKLFDLSSNRDVITW 180
Query: 202 ----SGLMKPSDVFI---------------WNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
+G ++ V I W++MI G+ G +E+L+LF+ M I G
Sbjct: 181 TALINGYVRAGQVLIGRELFDKMPERNSVSWSAMITGYVRVGFFEEALELFNAMLISGFW 240
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQF 302
P+ + ++ACA G + + + + +N M A ++D+ A+ G + A
Sbjct: 241 PNHAGIVCAINACASLGALDQGRWIHCYIKRNRMDLDRVMGAALIDMYAKCGCIEIACSI 300
Query: 303 LCQIPIQPTASMLGALLNGCMNHGK 327
++ + L++G NHG+
Sbjct: 301 FGELR-NRDVHVYTCLISGLANHGQ 324
>30063.m001440 pentatricopeptide repeat-containing protein, putative
Length = 615
Score = 298 bits (764), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 145/330 (43%), Positives = 220/330 (66%), Gaps = 3/330 (0%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N++LD Y KCG +ARQ+F LMP ++++SW+ +I G +G + EAL +F M+ G K
Sbjct: 277 NALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLK 336
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
P+ VT+V VL +CA+LG L+ G+ +H Y+ N + + +LVDMYAKCG+I +A V
Sbjct: 337 PDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMV 396
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F++ MK DV+ + +MI GFA HG +L +FSEM +GV+PD +T + +LSAC+H G
Sbjct: 397 FQA--MKCKDVYSYTAMIVGFAMHGKADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAG 454
Query: 260 LVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGAL 318
L++E F + + + P++EHY CMVD++ RAG ++EA F ++PI P AS+ G+L
Sbjct: 455 LLEEGRRHFQDMSRLYHLQPQTEHYGCMVDLLGRAGLISEAEAFTNKMPIVPDASVWGSL 514
Query: 319 LNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVK 378
L C H K++L ETV +KLIE+EP +DG Y+ +SN+Y+ RW A R+AM++ +K
Sbjct: 515 LGACKIHAKVELGETVIQKLIEMEPERDGAYILMSNIYSSANRWRDALKWRKAMKQNNIK 574
Query: 379 KSPGYSFVEMHGALHRFVAHDKSHPSSEQI 408
K+PG S +E+ G +H F +KSHP S ++
Sbjct: 575 KTPGCSSIEVDGMVHEFRKGEKSHPKSREM 604
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 39/231 (16%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M +G+ PD +T + + A L ELG +H YI K ++D +V+N+L+ MY+
Sbjct: 330 MQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHMKADGYVANALVDMYAKCGS 389
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I A VF + K++ S+ +M+ G+A
Sbjct: 390 IDQAFMVFQAMKCKDVYSYTAMIVGFA-------------------------------MH 418
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G D ALA+F EM G +P+ VT+V VL AC+H G L++GR + D L +
Sbjct: 419 GKADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGR---RHFQDMSRLYHLQPQ 475
Query: 181 TS----LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
T +VD+ + G I EA F + + D +W S++G H V+
Sbjct: 476 TEHYGCMVDLLGRAGLISEA-EAFTNKMPIVPDASVWGSLLGACKIHAKVE 525
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 130/319 (40%), Gaps = 55/319 (17%)
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTS 182
+ +++ +M + G P+ T+ +L AC+ A + +H + I L L ++ +
Sbjct: 119 FTHIFSLYRQMLLIGLSPDTYTLPYLLKACSQSHAFIEALQIHAHSIKTGLSSNLFVKNT 178
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
L+ YA G I+ VF G D+ W ++I ++ G E++ F M+
Sbjct: 179 LMRFYAVSGFIEAVEKVFDQG--PHWDLISWTTLIQAYSKMGYPSEAIAAFFRMNCTA-- 234
Query: 243 PDEITYLNLLSACAHGG--------LVKEAWYFFDC----------------LGKNGMTP 278
D +T + +LSAC+ G L + FD G+ +
Sbjct: 235 -DRMTLVVVLSACSQLGDFTLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLAR 293
Query: 279 KSEH---------YACMVDVMARAGQVAEA---YQFLCQIPIQPTASMLGALLNGCMNHG 326
+ H + M+ +A G EA ++ + + ++P + L +LN C N G
Sbjct: 294 QLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLG 353
Query: 327 KLDLAETVGRKLIELEPHQDGRYV--GLSNVYAIFRRWDKARSMREAMERMGVKKSPGYS 384
L+L + V + + DG YV L ++YA D+A + +AM+ V YS
Sbjct: 354 DLELGKWVHSYIDKNHMKADG-YVANALVDMYAKCGSIDQAFMVFQAMKCKDV-----YS 407
Query: 385 FV------EMHGALHRFVA 397
+ MHG R +A
Sbjct: 408 YTAMIVGFAMHGKADRALA 426
>30147.m014388 pentatricopeptide repeat-containing protein, putative
Length = 551
Score = 297 bits (761), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 162/414 (39%), Positives = 239/414 (57%), Gaps = 4/414 (0%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R V PD ++PF KA A L L +H + K G+ SD +V NSLIH+YS F
Sbjct: 128 MRRFSVPPDFHSYPFALKACAHLRVLSLAQCLHSQVFKFGFVSDLYVINSLIHVYSLFDC 187
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A +VFD +++VS+N+++DG+ K G+ AR++FDLMP +D +SW LI GY +
Sbjct: 188 LNYACQVFDESSDRDVVSYNALVDGFVKAGEFVKAREIFDLMPMRDSVSWGSLIAGYAQG 247
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+EA+ +F+ M +P+ + +VS L ACA LG L+KG+ +H Y+ N + L
Sbjct: 248 SYCNEAIGLFDLMMGLKLEPDNIALVSALSACAQLGELEKGKQIHDYIKKNRIQADSFLS 307
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T LVD YAK G I A+ VF L + WN+M+ G A HG L+ FS M G
Sbjct: 308 TGLVDFYAKSGCIDTAIKVFE--LSPDKSLITWNAMLIGIAMHGNSHLLLNYFSRMMEAG 365
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAEA 299
+KPD I++L +L C+HGGLV EA FD + G+ + +HY CM D++ARAG + EA
Sbjct: 366 IKPDGISFLGVLVGCSHGGLVDEAKKLFDEMESIYGVRRELKHYGCMADLLARAGLIKEA 425
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+ +P+ + LL GC HG +++AE ++++EL+P G Y L+NVYA
Sbjct: 426 VELTKGLPMGGDIFVWSGLLGGCRIHGNIEIAEQAAKQVMELKPEDGGVYSILANVYANA 485
Query: 360 RRWDKARSMREAM-ERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML 412
RW+ +R +M VKK+ G S +++ G H F+A + H S +IYM+L
Sbjct: 486 DRWEDVVKIRRSMSSNRAVKKNAGRSSIQLGGLTHEFLAGESLHAQSSEIYMVL 539
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 130/320 (40%), Gaps = 40/320 (12%)
Query: 95 ARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAH 154
A FD + ++ +I + AL F +MR P+ + L ACAH
Sbjct: 90 AVSTFDNIQNPSTFCYNVIIRLHTLHSSALSALHFFLQMRRFSVPPDFHSYPFALKACAH 149
Query: 155 LGALDKGRMMHH-----------YVI--------------------DNELPLTLVLRTSL 183
L L + +H YVI D +V +L
Sbjct: 150 LRVLSLAQCLHSQVFKFGFVSDLYVINSLIHVYSLFDCLNYACQVFDESSDRDVVSYNAL 209
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
VD + K G +A +F LM D W S+I G+A E++ LF M + ++P
Sbjct: 210 VDGFVKAGEFVKAREIF--DLMPMRDSVSWGSLIAGYAQGSYCNEAIGLFDLMMGLKLEP 267
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
D I ++ LSACA G +++ D + KN + S +VD A++G + A +
Sbjct: 268 DNIALVSALSACAQLGELEKGKQIHDYIKKNRIQADSFLSTGLVDFYAKSGCIDTAIKVF 327
Query: 304 CQIPIQPTASML--GALLNGCMNHGKLDLAETVGRKLIELEPHQDG-RYVGLSNVYAIFR 360
+ P S++ A+L G HG L +++E DG ++G+ +
Sbjct: 328 ---ELSPDKSLITWNAMLIGIAMHGNSHLLLNYFSRMMEAGIKPDGISFLGVLVGCSHGG 384
Query: 361 RWDKARSMREAMERM-GVKK 379
D+A+ + + ME + GV++
Sbjct: 385 LVDEAKKLFDEMESIYGVRR 404
>29756.m000514 pentatricopeptide repeat-containing protein, putative
Length = 602
Score = 293 bits (749), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/430 (33%), Positives = 253/430 (58%), Gaps = 5/430 (1%)
Query: 3 RVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIP 62
R+G+ + +F L + + EL HG + AG+ S+ +S+S++ Y+ ++
Sbjct: 176 RLGIGYNEYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVISSSVLDAYAKCSEMG 235
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
+AR++FD + ++++++W +M+ GYA+ GD+ AR++FDLMPE++ ++W+ LI GY R
Sbjct: 236 DARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTSLIAGYARHDL 295
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTS 182
+AL +F +M +P++ T S LCA A + +L+ G+ +H Y+I + ++ +S
Sbjct: 296 GHKALELFTKMMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRTNIRPNTIVVSS 355
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPS-DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV 241
L+DMY+KCG ++ VF LM DV +WN++I A HG +E++ +F +M +G+
Sbjct: 356 LIDMYSKCGCLEVGRLVF--DLMGDKWDVVLWNTIISSLAQHGRGQEAIQMFDDMVRLGM 413
Query: 242 KPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAEAY 300
KPD IT + LL+AC+H GLV+E ++ + +G+ P EHYAC++D++ RAG
Sbjct: 414 KPDRITLIVLLNACSHSGLVQEGLRLYESITSCHGVIPNQEHYACLIDLLGRAGHFDTLM 473
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFR 360
L ++P +P + ALL C HG ++ V K+IEL+P YV LS+++A
Sbjct: 474 NQLEKMPCKPNDEIWNALLGVCRMHGNIEFGREVAEKIIELDPQSSAAYVLLSSIHAAVG 533
Query: 361 RWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
RW+ ++R+ M V+K S++E+ +H F A D+ HP E IY+ L + M+
Sbjct: 534 RWELVENVRQLMNERHVRKDRAISWIEIENKVHSFTASDRLHPLKEVIYLALKQLAGHME 593
Query: 421 HIVDYENQEY 430
++ N+E+
Sbjct: 594 EVLS-TNREW 602
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 160/322 (49%), Gaps = 30/322 (9%)
Query: 3 RVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYES-DRFVSNSLIHMYSSFRDI 61
R G+ T +L + A +LG +H ++ G + + F++N LI+MYS D
Sbjct: 43 RNGIRLPSKTLAYLLQQCANTKSLKLGKWVHLHLKVTGLKRPNTFLANHLINMYSKCGDY 102
Query: 62 PNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKG 121
P+A KVFD + +NL SWN ML GYAK G I AR++FD MPE+DV+SW+ ++ Y + G
Sbjct: 103 PSAYKVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMPEKDVVSWNTMVIAYAKSG 162
Query: 122 DYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRT 181
++AL + E+R G NE + +L C + L+ + H V+ LV+ +
Sbjct: 163 FCNDALRFYRELRRLGIGYNEYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVISS 222
Query: 182 SLVDMYAKCGAIQEALHVFR--------------SG---------------LMKPSDVFI 212
S++D YAKC + +A +F SG LM +
Sbjct: 223 SVLDAYAKCSEMGDARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVA 282
Query: 213 WNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLG 272
W S+I G+A H L ++L+LF++M + ++PD+ T+ + L A A + L
Sbjct: 283 WTSLIAGYARHDLGHKALELFTKMMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLI 342
Query: 273 KNGMTPKSEHYACMVDVMARAG 294
+ + P + + ++D+ ++ G
Sbjct: 343 RTNIRPNTIVVSSLIDMYSKCG 364
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 44/234 (18%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ + + PD TF ASA + G IHGY+ + + V +SLI MYS
Sbjct: 306 MMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRTNIRPNTIVVSSLIDMYS---- 361
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ-DVLSWSCLIDGYVR 119
KCG + + R VFDLM ++ DV+ W+ +I +
Sbjct: 362 ---------------------------KCGCLEVGRLVFDLMGDKWDVVLWNTIISSLAQ 394
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMH------HYVIDNEL 173
G EA+ +F++M G KP+ +T++ +L AC+H G + +G ++ H VI N+
Sbjct: 395 HGRGQEAIQMFDDMVRLGMKPDRITLIVLLNACSHSGLVQEGLRLYESITSCHGVIPNQE 454
Query: 174 PLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
L+D+ + G ++ KP+D IWN+++G HG ++
Sbjct: 455 HY-----ACLIDLLGRAGHFDTLMNQLEKMPCKPNDE-IWNALLGVCRMHGNIE 502
>28124.m000243 pentatricopeptide repeat-containing protein, putative
Length = 604
Score = 292 bits (748), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 163/489 (33%), Positives = 257/489 (52%), Gaps = 71/489 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLA--IHGYITKAGYESDRFVSNSLIHMYSS- 57
M + G+F D+ T+PFL KA C K L IH ++ K G+ D FV NSLI YS
Sbjct: 112 MQKNGLFADNFTYPFLLKA--CNGKGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDSYSKC 169
Query: 58 --------------------------------FRDIPNARKVFDGIPVKNLVSWNSMLDG 85
D+ ARK+FD + ++ VSWN++LDG
Sbjct: 170 GLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMAERDAVSWNTILDG 229
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD--------------------- 124
Y K G++S A +F+ MPE++V+SWS ++ GY + GD +
Sbjct: 230 YVKAGEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMARMLFDKMPFKNLVTWTIII 289
Query: 125 ----------EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELP 174
EA ++ +M +G KP++ T++S+L ACA G L G+ +H + +
Sbjct: 290 SGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLGKKVHASIKKIRIK 349
Query: 175 LTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFS 234
++ + +LVDMYAKCG + +AL +F M+ D+ WN M+ G A HG ++++ LFS
Sbjct: 350 CSVNVSNALVDMYAKCGRVDKALSIFNEMSMR--DLVSWNCMLQGLAMHGHGEKAIQLFS 407
Query: 235 EMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARA 293
+M G KPD++T + +L AC H G V + +F+ + ++ G+ P EHY CM+D++ R
Sbjct: 408 KMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGIVPHIEHYGCMIDLLGRG 467
Query: 294 GQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLS 353
G++ EA++ + +P++P + G LL C H + LAE V +LI LE G Y LS
Sbjct: 468 GRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHNAVPLAEKVLDRLITLEQSDPGNYSMLS 527
Query: 354 NVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLG 413
N++A W+ +MR M+ GV+K G S +E+ +H F DKSHP +++IY +L
Sbjct: 528 NIFAAAGDWNSVANMRLQMKSTGVQKPSGASSIELDDEVHEFTVFDKSHPETDKIYQILV 587
Query: 414 FIVSQMKHI 422
+ +K +
Sbjct: 588 KLGQDLKQV 596
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 108/230 (46%), Gaps = 12/230 (5%)
Query: 82 MLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN 141
++ ++ C +++A VF+ + + +V ++ LI +V+ +A A F +M+ +G +
Sbjct: 61 LISAFSLCHQMNLAVNVFNQIQDPNVHLYNTLIRAHVQNSQSLKAFATFFDMQKNGLFAD 120
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG--AIQEALHV 199
T +L AC G L +M+H +V L + SL+D Y+KCG + A+ +
Sbjct: 121 NFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDSYSKCGLLGVNYAMKL 180
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F M D+ WNSMIGG G + + LF EM + D +++ +L G
Sbjct: 181 FME--MGEKDLVSWNSMIGGLVKAGDLGRARKLFDEM----AERDAVSWNTILDGYVKAG 234
Query: 260 LVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ 309
+ +A+ F+ + + + ++ MV + G + A ++P +
Sbjct: 235 EMSQAFNLFEKMPERNVVS----WSTMVSGYCKTGDMEMARMLFDKMPFK 280
>28657.m000400 pentatricopeptide repeat-containing protein, putative
Length = 498
Score = 292 bits (747), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 153/403 (37%), Positives = 232/403 (57%), Gaps = 3/403 (0%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD+ T+ F+ KA + G +H I KAG + + +SLIHMY+S I A V
Sbjct: 85 PDNYTYTFVLKACSNQKALPEGKQVHCQIIKAGISPNTHIHSSLIHMYTSSGSIVEAECV 144
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
+N ++ NSM+ GY G + AR +FD M +DV SWS +I G + G + EAL
Sbjct: 145 LREFSEENTLAKNSMISGYLSKGHVDKARAMFDQMKAKDVASWSAIITGCTKNGMHTEAL 204
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
A+FE+M VS PNE +VS+L ACAHLGAL +GR +H Y+ +++ L T+L+DMY
Sbjct: 205 ALFEDMMVSHTLPNESALVSLLSACAHLGALHQGRWIHAYIDRIGADMSIRLSTALIDMY 264
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
AKCG IQ FR M D+ W ++I GFA +G K+ +LF EM G+ P+ +
Sbjct: 265 AKCGDIQSGYKFFRK--MPRRDIVTWGAIISGFAIYGQAKKCFELFEEMLADGIYPNGVI 322
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
++ +LSAC+H G V+E +F+ + + G+ P EHY CMVD++ RAG++ EA +F+ +
Sbjct: 323 FVAILSACSHAGYVEEGKLYFNQMMVDLGIRPSIEHYGCMVDLLGRAGRLKEAEEFIISM 382
Query: 307 PIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKAR 366
P +P + + G++L+ C H L+ R LIELEP RY ++ +A
Sbjct: 383 PEKPNSVIWGSMLSACRTHNDLNRGSWAFRHLIELEPRSGDRYKLAGLMFGNAGEKQEAT 442
Query: 367 SMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIY 409
+R+ +E G++ + G SF+E+ G +H F+ D H + +IY
Sbjct: 443 KIRKMIEDQGMETTSGSSFIEVDGTIHEFLVGDTIHNEAAEIY 485
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 139/294 (47%), Gaps = 30/294 (10%)
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
+A+ V G+ + + +L+ Y +IS AR +F+ +P DV ++ +I G +
Sbjct: 8 HAQFVVSGLLNHHSLCGRRLLESYVTMSEISYARSIFERIPYLDVFVYNTMIRGLMLGKR 67
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTS 182
++L +F E+ + KP+ T VL AC++ AL +G+ +H +I + + +S
Sbjct: 68 PYDSLLLFNELLLGCLKPDNYTYTFVLKACSNQKALPEGKQVHCQIIKAGISPNTHIHSS 127
Query: 183 LVDMYAKCGAIQEALHVFR--------------SGL---------------MKPSDVFIW 213
L+ MY G+I EA V R SG MK DV W
Sbjct: 128 LIHMYTSSGSIVEAECVLREFSEENTLAKNSMISGYLSKGHVDKARAMFDQMKAKDVASW 187
Query: 214 NSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK 273
+++I G +G+ E+L LF +M + P+E ++LLSACAH G + + + + +
Sbjct: 188 SAIITGCTKNGMHTEALALFEDMMVSHTLPNESALVSLLSACAHLGALHQGRWIHAYIDR 247
Query: 274 NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
G ++D+ A+ G + Y+F ++P + + GA+++G +G+
Sbjct: 248 IGADMSIRLSTALIDMYAKCGDIQSGYKFFRKMPRRDIVT-WGAIISGFAIYGQ 300
>28350.m000103 pentatricopeptide repeat-containing protein, putative
Length = 533
Score = 288 bits (736), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 153/417 (36%), Positives = 254/417 (60%), Gaps = 3/417 (0%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+L V P LT+P + KA A L G +HG + K G E+D F+ N+++ MY +
Sbjct: 113 LLTSPVQPQRLTYPSVFKAFAQLDLASEGAQLHGKMIKLGLENDSFIRNTILFMYVNCGF 172
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
ARKVFD ++V+WN+M+ G AKCG + +R++FD M ++ +SW+ +I GYVR
Sbjct: 173 TSEARKVFDRGMDFDIVAWNTMIMGVAKCGLVDESRRLFDKMSLRNAVSWNSMISGYVRN 232
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G + +AL +F++M+V +P+E TMVS+L ACA LGA+ +G +H Y++ + L ++
Sbjct: 233 GRFFDALELFQKMQVERIEPSEFTMVSLLNACACLGAIRQGEWIHDYMVKKKFELNPIVV 292
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T+++DMY+KCG+I +A+ VF+S + + WNSMI G A +G E+L LFS +
Sbjct: 293 TAIIDMYSKCGSIDKAVQVFQSAPRR--GLSCWNSMILGLAMNGQENEALQLFSVLQSSD 350
Query: 241 VKPDEITYLNLLSACAHGGLVKEAW-YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
++PD+++++ +L+AC H G+V +A YF K + P +H++CMVDV+ RAG + EA
Sbjct: 351 LRPDDVSFIAVLTACDHTGMVDKAKDYFLLMRDKYKIKPGIKHFSCMVDVLGRAGLLEEA 410
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+ + + + P A + G+LL C +G + +A+ LIEL P + +V ++N YA
Sbjct: 411 EELIRSMHVDPDAIIWGSLLWSCCKYGNIKMAKRAANHLIELNPSESSSFVLVANAYAAA 470
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIV 416
+++A R ++ + K PG S +E+ G +H FVA ++HP ++IY +L +
Sbjct: 471 NNFEEALKERLTLKENHIGKEPGCSCIEVGGEVHEFVAGGRAHPEIKEIYRVLDVLT 527
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 122/273 (44%), Gaps = 38/273 (13%)
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP-KPNEVTMVSV 148
GDI+ A VF + ++ +W+ +I G+ R +++++ +M ++ P +P +T SV
Sbjct: 69 GDINYAYLVFVQIQNPNIFAWNTIIRGFSRSSVPQNSISLYIDMLLTSPVQPQRLTYPSV 128
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
A A L +G +H +I L +R +++ MY CG EA VF G+
Sbjct: 129 FKAFAQLDLASEGAQLHGKMIKLGLENDSFIRNTILFMYVNCGFTSEARKVFDRGM--DF 186
Query: 209 DVFIWNSMIGGFACHGLVKES-------------------------------LDLFSEMH 237
D+ WN+MI G A GLV ES L+LF +M
Sbjct: 187 DIVAWNTMIMGVAKCGLVDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALELFQKMQ 246
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVA 297
+ ++P E T ++LL+ACA G +++ + D + K ++D+ ++ G +
Sbjct: 247 VERIEPSEFTMVSLLNACACLGAIRQGEWIHDYMVKKKFELNPIVVTAIIDMYSKCGSID 306
Query: 298 EAYQFLCQIPIQP----TASMLGALLNGCMNHG 326
+A Q P + + +LG +NG N
Sbjct: 307 KAVQVFQSAPRRGLSCWNSMILGLAMNGQENEA 339
>29848.m004527 pentatricopeptide repeat-containing protein, putative
Length = 507
Score = 286 bits (733), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 157/460 (34%), Positives = 252/460 (54%), Gaps = 68/460 (14%)
Query: 3 RVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIP 62
+G D+ TFP L KA+ + ++G A+HG K G+ + FV +L++MY + I
Sbjct: 43 ELGFHADNYTFPILLKAAGRICASKIGFALHGQTIKTGFCAHAFVQTALVNMYGNLHCIG 102
Query: 63 NARKVFDGIPVKNLVSWNSMLD-------------------------------GYAKCGD 91
+A KVF+ +PVK+L++WNSMLD GY+ G+
Sbjct: 103 DAFKVFEIMPVKDLIAWNSMLDAYASNAQMDYASNLFNSMPLKDISSFNIMISGYSTRGE 162
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVF--------------------- 130
+AR +FD M +D +SW+ +I Y+R GD ++ LA+F
Sbjct: 163 AMLARSIFDSMEVRDFVSWNSMISAYIRAGDMEKGLALFREMPVKNTVTWNTMITGCLQS 222
Query: 131 ----------EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
EEM+ + P+ +T+ SVL C HLG+L G +H Y IDN L + +
Sbjct: 223 EHFGMVLDLFEEMKTANYIPDYLTVTSVLSTCGHLGSLGTGIKIHIYAIDNGLVSSPHVT 282
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T+L+DMY+KCG+I++ LHVF +K D++ WN++I A HG +L +F +M
Sbjct: 283 TALIDMYSKCGSIEQGLHVFCKSQVK--DIYCWNALISALALHGHGYAALKVFGKMRKNH 340
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
++PD+IT++ +++AC+H GLV+E F + ++ G++PK EHY CMV+++ R+G +A A
Sbjct: 341 IQPDDITFIGIINACSHSGLVQEGCQLFVSMQEDFGISPKLEHYGCMVNLLGRSGHLALA 400
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPH--QDGRYVGLSNVYA 357
Q + +P +P S+LGALL+ C+ + L+ E V +L+ + H DG + SN+YA
Sbjct: 401 LQVIETMPFEPGESILGALLSACIIYQDLETGERV-IELVCSKAHYLSDGELMMFSNLYA 459
Query: 358 IFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVA 397
W++A RE M G+ K+ GYS +E+ G +F+A
Sbjct: 460 SCGNWEEANRWREMMNSTGIVKTAGYSVIEVSGRFQKFLA 499
>30147.m014323 pentatricopeptide repeat-containing protein, putative
Length = 641
Score = 286 bits (732), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 150/395 (37%), Positives = 234/395 (59%), Gaps = 3/395 (0%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M V D +T + A + L + + ++ YI + D ++ NSLI MY
Sbjct: 249 MREANVTADSVTMVKVILACSYLCEDGVVDSMVKYIEDKHVDIDVYLGNSLIDMYGRRGL 308
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ AR+VFD + KN+VSWN+ML GYA GD+ A+++F+ MP ++V+SW+C+I G +
Sbjct: 309 VDLARRVFDRMQEKNIVSWNAMLTGYATAGDLVAAKKLFNEMPIRNVISWTCMISGCAQA 368
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+AL +F+EM + KP+E+T+ SVL AC+HLG LD G+ +H Y+ +++ + +
Sbjct: 369 NQCSDALKLFQEMMDANVKPDEITVSSVLSACSHLGLLDTGQTVHEYMCRHDIKSDVYVG 428
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+DMY KCG + +AL VF MK D W SMI G A +G V +LFS+M G
Sbjct: 429 NALIDMYCKCGVVDKALEVFHD--MKKKDSVSWTSMILGLAVNGFVDNVFELFSQMLRDG 486
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAEA 299
++P +++ +L AC H GLV + +F+ + G+ P+ +HY C+VD+++R+G++ A
Sbjct: 487 LQPTHGSFIGILLACTHAGLVDKGLEYFESMEHVYGLRPEMKHYGCVVDLLSRSGELDRA 546
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
Y+F+ Q+P+ P + LL+ C H L LAE KL+EL+P G YV LSN YA
Sbjct: 547 YEFIKQMPVVPDVVLWRILLSACKLHRNLVLAEIATSKLLELDPSNSGNYVLLSNTYAGS 606
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHR 394
RWD A MR+ M V+K +S +E+ GA ++
Sbjct: 607 DRWDDASRMRDLMVVGDVQKPSSWSSIEVIGATNK 641
>30204.m001733 pentatricopeptide repeat-containing protein, putative
Length = 579
Score = 286 bits (731), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 154/422 (36%), Positives = 240/422 (56%), Gaps = 35/422 (8%)
Query: 16 LAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKN 75
L +A L + GL++HG++ + D + SLI MY
Sbjct: 191 LIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQTSLIDMY-------------------- 230
Query: 76 LVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRV 135
AK G + +A +VF+ +P + V+SW LI G+ + G ++ LA EM+
Sbjct: 231 -----------AKNGKLELASRVFEGIPYKSVISWGALISGFAQNGFANKTLASLVEMQN 279
Query: 136 SGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQE 195
SG KP+ V+++S L ACA +G L G+ +H +++ L L V T+L+DMYAKCGA+
Sbjct: 280 SGFKPDLVSLISSLSACAQVGNLKVGKSLHGHIV-KRLYLDKVSGTALIDMYAKCGALTF 338
Query: 196 ALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC 255
A +F ++P D+ +WN+MI + HG E+L LF +M + PD T+ +LLSAC
Sbjct: 339 ARALFDQ--IEPRDLILWNAMISSYGIHGDGIEALSLFLKMKETNITPDHATFASLLSAC 396
Query: 256 AHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASM 314
+H GLV+E Y+F L K+ + P +HYACMVD+++RAGQV EAYQ + + I+P ++
Sbjct: 397 SHSGLVEEGQYWFHVLIDKSKIQPSEKHYACMVDLLSRAGQVEEAYQLIESMHIKPGLAI 456
Query: 315 LGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMER 374
ALL+GC+NH L + E V +K++E P G YV +SN +++ ++WD A R+ M+
Sbjct: 457 WVALLSGCLNHKNLLIGEMVAKKILESNPDDLGIYVLVSNFFSMAKKWDDAAVFRKIMKN 516
Query: 375 MGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHIVDYENQEYYFYD 434
G++K PGYS VE++G L F+ DK+H + I +L + ++M+ I + E F D
Sbjct: 517 TGMRKVPGYSAVEVNGDLQAFLMEDKNHNQYQDILQILDILDNEMRSIRCFSETELVFQD 576
Query: 435 NE 436
E
Sbjct: 577 TE 578
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 145/306 (47%), Gaps = 34/306 (11%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G+ PD TF KA + L+ ++G I GY D FV +S++++Y
Sbjct: 75 MISEGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDVFVVSSVLNLY----- 129
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AK G + A+ VFD M ++DV+SW+ +I G+ +
Sbjct: 130 --------------------------AKSGKMDKAKIVFDKMVKRDVVSWTTMITGFAQS 163
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +A+ ++ M+ + + V MV ++ AC LG G +H +++ E+ + VL+
Sbjct: 164 GRPLDAIDIYRTMQKERTEGDGVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQ 223
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
TSL+DMYAK G ++ A VF + V W ++I GFA +G ++L EM G
Sbjct: 224 TSLIDMYAKNGKLELASRVFEG--IPYKSVISWGALISGFAQNGFANKTLASLVEMQNSG 281
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
KPD ++ ++ LSACA G +K + K K A ++D+ A+ G + A
Sbjct: 282 FKPDLVSLISSLSACAQVGNLKVGKSLHGHIVKRLYLDKVSGTA-LIDMYAKCGALTFAR 340
Query: 301 QFLCQI 306
QI
Sbjct: 341 ALFDQI 346
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 125/261 (47%), Gaps = 6/261 (2%)
Query: 82 MLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN 141
++ Y + +I AR VF+ MP++ + +W+ +I Y R DE L ++ M G KP+
Sbjct: 24 LIASYGRINNIIPARNVFEKMPQRSINAWNSMIIAYSRTNYPDEVLNLYYRMISEGIKPD 83
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR 201
T L AC+ L LD G ++ + +D + + +S++++YAK G + +A VF
Sbjct: 84 SSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDVFVVSSVLNLYAKSGKMDKAKIVFD 143
Query: 202 SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
M DV W +MI GFA G +++D++ M + D + + L+ AC G
Sbjct: 144 K--MVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKERTEGDGVVMVGLIQACTSLGDS 201
Query: 262 KEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNG 321
K + + M + ++D+ A+ G++ A + IP + S GAL++G
Sbjct: 202 KFGLSVHGHMVRREMNMDNVLQTSLIDMYAKNGKLELASRVFEGIPYKSVIS-WGALISG 260
Query: 322 CMNHGKLDLAETVGRKLIELE 342
+G A L+E++
Sbjct: 261 FAQNG---FANKTLASLVEMQ 278
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 34/224 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G PD ++ A A + ++G ++HG+I K Y D+ +LI MY+
Sbjct: 277 MQNSGFKPDLVSLISSLSACAQVGNLKVGKSLHGHIVKRLY-LDKVSGTALIDMYAKCGA 335
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ AR +FD I ++L+ WN+M+ Y
Sbjct: 336 LTFARALFDQIEPRDLILWNAMISSYGI-------------------------------H 364
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID-NELPLTLVL 179
GD EAL++F +M+ + P+ T S+L AC+H G +++G+ H +ID +++ +
Sbjct: 365 GDGIEALSLFLKMKETNITPDHATFASLLSACSHSGLVEEGQYWFHVLIDKSKIQPSEKH 424
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
+VD+ ++ G ++EA + S +KP + IW +++ G H
Sbjct: 425 YACMVDLLSRAGQVEEAYQLIESMHIKPG-LAIWVALLSGCLNH 467
>29844.m003176 pentatricopeptide repeat-containing protein, putative
Length = 640
Score = 280 bits (715), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/357 (38%), Positives = 215/357 (60%), Gaps = 3/357 (0%)
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
A++ FD + +N+ SW ++DGY K GD+ AR VFD MPE+++++WS +I GY + G
Sbjct: 280 AKEFFDRMQERNVASWVMIIDGYIKVGDVDAARSVFDQMPEKNLVAWSTMIGGYAKTGHP 339
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
+L +++ + G KP+E + ++ AC+ LG D + + L L + TSL
Sbjct: 340 YSSLKLYKTFKEQGIKPDETFALGIISACSQLGVPDTAESVICDFVGPSLFPNLQVVTSL 399
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
+DMYAKCG I+ A+ VF ++ D+ ++++I FA HGL ++++ LFSEM +KP
Sbjct: 400 IDMYAKCGNIERAVQVFE--MVDQKDLHCYSTVITAFANHGLSEDAISLFSEMQKANIKP 457
Query: 244 DEITYLNLLSACAHGGLVKEAWYFF-DCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQF 302
D + +L +L+AC HGGLV E F + + G+ P +HYACMVD++ RAG + EA+
Sbjct: 458 DGVAFLGVLTACNHGGLVGEGRRLFRQMIDEYGIQPSEKHYACMVDILGRAGCLEEAHSL 517
Query: 303 LCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRW 362
+C +P+ P A++ GALL+ C H + LAE +L ++EP+ G YV L N+YA +W
Sbjct: 518 ICSMPVAPNATVWGALLSACRVHLNVQLAEAAATELFQIEPNNSGNYVLLFNIYADAGQW 577
Query: 363 DKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
D +R + V+K+ G S++E+ +H FV DKSH SE+I+ ML + M
Sbjct: 578 DDFSKVRAMIRENRVRKNRGSSWIELGSVIHEFVMGDKSHFDSERIFFMLELLCKDM 634
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 162/353 (45%), Gaps = 34/353 (9%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R + P + T + KA + L + + G ++G + GYE D V N +I ++ +
Sbjct: 93 MHRENIVPLNFTIASVLKAVSRLGRIKDGDLVYGLAVRCGYEFDLVVKNVMIELFMRCGE 152
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +AR++FD + ++ VSWNSM+ GY G + +AR++FD M E++V+SW+ +I GYV+
Sbjct: 153 MGSARQMFDEMEERDAVSWNSMITGYGNNGRVDIARKLFDRMEERNVISWTSMIQGYVKA 212
Query: 121 GDYDEALAVFEEM----------RVSG-----------------PKPNEVTMVSVLCACA 153
GD EA +FE M VS P + T ++ C
Sbjct: 213 GDLLEARVLFERMPEKDLASWKVMVSAYMSVGNLVAARNLFELMPIHDVGTWNLMISGCC 272
Query: 154 HLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIW 213
G +D + + + + ++ ++D Y K G + A VF M ++ W
Sbjct: 273 KAGEMDAAKEFFDRMQERNVASWVM----IIDGYIKVGDVDAARSVFDQ--MPEKNLVAW 326
Query: 214 NSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK 273
++MIGG+A G SL L+ G+KPDE L ++SAC+ G+ A
Sbjct: 327 STMIGGYAKTGHPYSSLKLYKTFKEQGIKPDETFALGIISACSQLGVPDTAESVICDFVG 386
Query: 274 NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
+ P + ++D+ A+ G + A Q ++ Q ++ NHG
Sbjct: 387 PSLFPNLQVVTSLIDMYAKCGNIERAVQVF-EMVDQKDLHCYSTVITAFANHG 438
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 134/296 (45%), Gaps = 14/296 (4%)
Query: 77 VSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVS 136
++ N +L Y+K G +S A ++FD PE + W+ LI G+ Y+ A A F +M
Sbjct: 37 LTLNKLLRLYSKFGAVSYAHKLFDETPEPNSFLWTALIHGFTENNQYENAFAFFIKMHRE 96
Query: 137 GPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEA 196
P T+ SVL A + LG + G +++ + LV++ +++++ +CG + A
Sbjct: 97 NIVPLNFTIASVLKAVSRLGRIKDGDLVYGLAVRCGYEFDLVVKNVMIELFMRCGEMGSA 156
Query: 197 LHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
+F M+ D WNSMI G+ +G V + LF M + + I++ +++
Sbjct: 157 RQMFDE--MEERDAVSWNSMITGYGNNGRVDIARKLFDRME----ERNVISWTSMIQGYV 210
Query: 257 HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLG 316
G + EA F+ + + + + MV G + A +PI +
Sbjct: 211 KAGDLLEARVLFERMPEKDLAS----WKVMVSAYMSVGNLVAARNLFELMPIHDVGT-WN 265
Query: 317 ALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAM 372
+++GC G++D A+ ++ E +V + + Y D ARS+ + M
Sbjct: 266 LMISGCCKAGEMDAAKEFFDRMQE---RNVASWVMIIDGYIKVGDVDAARSVFDQM 318
>29635.m000449 pentatricopeptide repeat-containing protein, putative
Length = 499
Score = 279 bits (714), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 150/388 (38%), Positives = 233/388 (60%), Gaps = 9/388 (2%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLA------IHGYITKAGYESDRFVSNSLIHMYSSFR 59
V PD TF FL KA + + K + IHG + K G+ S FV N+LI++Y+
Sbjct: 112 VDPDEFTFNFLIKARSRVHKVHNFPSTLECDEIHGAVFKYGFCSHLFVQNALINLYAVKG 171
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
A +VF+ ++VSW+ ++ + + G++ +ARQVFD MPE+DV+SW+ ++ GY +
Sbjct: 172 SPAAAWRVFNETVGVDVVSWSGLVLAHVRGGELELARQVFDDMPEKDVVSWTAMVSGYSK 231
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
EAL +F EM +G +P+EVT+VSV+ AC +LG ++ G +H Y+ +N + L
Sbjct: 232 ANCSREALELFWEMSDAGIRPDEVTIVSVISACTNLGDVETGMNVHSYINENGFGWMVSL 291
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+L++MYAKCG + A VF + MK + WNSMI A HG +++ +LFS M
Sbjct: 292 CNALINMYAKCGCVDRAWRVFNN--MKRKSLITWNSMISACANHGYAEDAFELFSCMLNS 349
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAE 298
G+ PD IT+L LL A H GLV E + F + ++ G+ EHY C+VD++ RAG++ E
Sbjct: 350 GIAPDGITFLALLIAYTHKGLVDEGYRLFQIMERDYGIEASIEHYGCIVDMLGRAGRLEE 409
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
AY+ + +PI + GALL C +G +++ E V +KL+EL+P + G Y+ L ++Y
Sbjct: 410 AYELIVTMPIPSNDIVWGALLAACRIYGDVNMGERVVKKLLELKPDEGGYYILLRDIYVA 469
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFV 386
R +A +R+AM+ G K+PGYS+V
Sbjct: 470 SGRTAEANHIRQAMQESGAMKNPGYSWV 497
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 128/273 (46%), Gaps = 9/273 (3%)
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLID 115
D+P A+++FD +P N +N+++ GYAK S +F+ M + D +++ LI
Sbjct: 65 DLPYAQRLFDQMPQPNTFFYNTIIRGYAKSSSPSYCVNLFNQMRQNHVDPDEFTFNFLIK 124
Query: 116 GYVRKGDYDEALAVFEEMRVSGP--KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL 173
R + E + G K + + V A +L A+ V + +
Sbjct: 125 ARSRVHKVHNFPSTLECDEIHGAVFKYGFCSHLFVQNALINLYAVKGSPAAAWRVFNETV 184
Query: 174 PLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF 233
+ +V + LV + + G ++ A VF M DV W +M+ G++ +E+L+LF
Sbjct: 185 GVDVVSWSGLVLAHVRGGELELARQVFDD--MPEKDVVSWTAMVSGYSKANCSREALELF 242
Query: 234 SEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARA 293
EM G++PDE+T ++++SAC + G V+ + +NG ++++ A+
Sbjct: 243 WEMSDAGIRPDEVTIVSVISACTNLGDVETGMNVHSYINENGFGWMVSLCNALINMYAKC 302
Query: 294 GQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
G V A++ + + + ++++ C NHG
Sbjct: 303 GCVDRAWRVFNNMK-RKSLITWNSMISACANHG 334
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 118/253 (46%), Gaps = 35/253 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G+ PD +T + A L E G+ +H YI + G+ + N+LI+MY+
Sbjct: 245 MSDAGIRPDEVTIVSVISACTNLGDVETGMNVHSYINENGFGWMVSLCNALINMYAKCGC 304
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A +VF+ + K+L++WNSM+ + C + A F+L +SC+++
Sbjct: 305 VDRAWRVFNNMKRKSLITWNSMI---SACANHGYAEDAFEL--------FSCMLN----- 348
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-RMMHHYVIDNELPLTLVL 179
SG P+ +T +++L A H G +D+G R+ D + ++
Sbjct: 349 ---------------SGIAPDGITFLALLIAYTHKGLVDEGYRLFQIMERDYGIEASIEH 393
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+VDM + G ++EA + + + PS+ +W +++ +G V + ++ +
Sbjct: 394 YGCIVDMLGRAGRLEEAYELIVT-MPIPSNDIVWGALLAACRIYGDVNMGERVVKKL--L 450
Query: 240 GVKPDEITYLNLL 252
+KPDE Y LL
Sbjct: 451 ELKPDEGGYYILL 463
>30147.m013942 pentatricopeptide repeat-containing protein, putative
Length = 441
Score = 278 bits (711), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 149/382 (39%), Positives = 238/382 (62%), Gaps = 7/382 (1%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D FP + K+ + +L +LG ++H +I K G+ S+ FV+++L+ MY I +ARK+F
Sbjct: 62 DPYVFPLVLKSCSAVLCPQLGTSVHAHIVKMGFLSNPFVASALVDMYGKCACIFSARKLF 121
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMP-EQDVLSWSCLIDGY--VRKGDYDE 125
D IP +N+V WN+M+ Y + A +FD M E +V +++ LI G V+ G +
Sbjct: 122 DEIPQRNVVVWNAMISLYTHSNRVRDALDMFDAMEIEPNVSTFNALIYGLSGVKDGSI-K 180
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
A+A + +MR G KPN +T++++L AC + AL+ R +H Y I N++ L + L+D
Sbjct: 181 AIAFYWKMRQLGLKPNLITLLALLPACVGIAALNLIREIHGYSIRNDIDRHPQLGSGLLD 240
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
Y +CG + A +VF MK DV W+S+I +A HG K +L++F +M + V+PD+
Sbjct: 241 AYGRCGCLINASNVFCG--MKERDVVAWSSLISAYALHGEAKNALEIFRQMELAKVQPDD 298
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLC 304
IT+L +L AC+H GL EA +F + + + S+HY+C+VDV++RAG++ EAY+ +
Sbjct: 299 ITFLAVLKACSHAGLADEALDYFTKMQEGYRLQAVSDHYSCLVDVLSRAGRLYEAYKVIQ 358
Query: 305 QIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDK 364
++P++ TA GALL C +G+++LAE VGR L E+EP YV L+ +YA R+D+
Sbjct: 359 EMPVKVTAKAWGALLGACRTYGEIELAEIVGRALFEIEPDNPANYVLLARIYASVGRYDE 418
Query: 365 ARSMREAMERMGVKKSPGYSFV 386
A+ +R M+ GVK SPG S+V
Sbjct: 419 AQRIRREMKERGVKVSPGSSWV 440
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 99/232 (42%), Gaps = 41/232 (17%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M ++G+ P+ +T L A + L IHGY + + + + L+ Y
Sbjct: 188 MRQLGLKPNLITLLALLPACVGIAALNLIREIHGYSIRNDIDRHPQLGSGLLDAYGRCGC 247
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ NA VF G+ +++V+W+S++ YA
Sbjct: 248 LINASNVFCGMKERDVVAWSSLISAYA-------------------------------LH 276
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-----RMMHHYVIDNELPL 175
G+ AL +F +M ++ +P+++T ++VL AC+H G D+ +M Y L
Sbjct: 277 GEAKNALEIFRQMELAKVQPDDITFLAVLKACSHAGLADEALDYFTKMQEGY----RLQA 332
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
+ LVD+ ++ G + EA V + +K + W +++G +G ++
Sbjct: 333 VSDHYSCLVDVLSRAGRLYEAYKVIQEMPVKVT-AKAWGALLGACRTYGEIE 383
>30174.m009150 pentatricopeptide repeat-containing protein, putative
Length = 800
Score = 273 bits (698), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/412 (36%), Positives = 234/412 (56%), Gaps = 34/412 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R G PD + A A + LG IHGY K + D FV NSLI M
Sbjct: 393 MQRQGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIKR-HILDEFVQNSLIDM------ 445
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
Y+KCG + +A +FD + + V++W+ +I G+ +
Sbjct: 446 -------------------------YSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQI 480
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G+ EA+ +F++M ++ NEVT ++ + AC+H+G L+KG+ +HH +I + L +
Sbjct: 481 GNSLEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKGKWLHHKLIAYGVKKDLFID 540
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T+L+DMYAKCG ++ A VF S M V W++MIGG HG + ++ LF+EM
Sbjct: 541 TALIDMYAKCGDLRIAHRVFDS--MSERSVVSWSAMIGGCGMHGDIDAAISLFAEMIQRE 598
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
+KP++IT++N+LSAC+H G V+E ++F+ + + P EH+ACMVD+++RAG + EAY
Sbjct: 599 MKPNDITFMNILSACSHSGYVEEGKFYFNSMKNFEVEPNLEHFACMVDLLSRAGDLDEAY 658
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFR 360
+ + +P AS+ GALLNGC H ++D+ + R L+++ G Y LSN+YA
Sbjct: 659 RIINSMPFPAEASIWGALLNGCRIHQRMDMIRNIERDLLDMRTDDTGYYTLLSNIYAEEG 718
Query: 361 RWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML 412
WD +R +R AM+ +G+KK PGYS +E+ ++RF A D SH ++I L
Sbjct: 719 NWDVSRKVRSAMKGIGLKKVPGYSTIELDKKVYRFGAGDVSHWQVKEINTFL 770
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 144/262 (54%), Gaps = 4/262 (1%)
Query: 81 SMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKP 140
++++ YA+ G +S +V + +++++SW+ LI Y +G + EAL +F +M+ G P
Sbjct: 341 ALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQIP 400
Query: 141 NEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF 200
+ ++ S + ACA++G L G +H Y I + L ++ SL+DMY+KCG + A +F
Sbjct: 401 DSFSLSSSISACANVGLLWLGHQIHGYAIKRHI-LDEFVQNSLIDMYSKCGHVDLAYLIF 459
Query: 201 RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGL 260
++ V WNSMI GF+ G E++ LF +M++ + +E+T+L + AC+H G
Sbjct: 460 DR--IQSKSVVAWNSMICGFSQIGNSLEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGH 517
Query: 261 VKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLN 320
+++ + L G+ ++D+ A+ G + A++ + + S A++
Sbjct: 518 LEKGKWLHHKLIAYGVKKDLFIDTALIDMYAKCGDLRIAHRVFDSMSERSVVSW-SAMIG 576
Query: 321 GCMNHGKLDLAETVGRKLIELE 342
GC HG +D A ++ ++I+ E
Sbjct: 577 GCGMHGDIDAAISLFAEMIQRE 598
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 33/252 (13%)
Query: 13 FPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIP 72
F + +A A ++G +HG I K G + D V SL+ MY + NA+KVFD +
Sbjct: 102 FSSVLRACAGFGNLDVGEEVHGRIIKYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMT 161
Query: 73 VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEE 132
++LVSW+S++ Y G+ S ++F L+ QDV
Sbjct: 162 TRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDV------------------------- 196
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
+ + VTM+S+ AC LG L + +H +I + L +LV MY++C
Sbjct: 197 ------ELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRCDD 250
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
A +F + M + W +MI + K++L +F EM V P+ +T + +L
Sbjct: 251 FSSAERIFSN--MFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVL 308
Query: 253 SACAHGGLVKEA 264
S+CA L++E
Sbjct: 309 SSCAGFNLLREG 320
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 112/246 (45%), Gaps = 4/246 (1%)
Query: 82 MLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN 141
+++ Y++ G + ++ VF+ D W+ LI +V EA++++ +M +
Sbjct: 39 LIESYSQIGCLQSSKLVFETFQNPDSFMWAVLIKCHVWSNFCGEAISLYNKMIYKQIPIS 98
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR 201
+ SVL ACA G LD G +H +I L + V+ TSL+ MY G + A VF
Sbjct: 99 DFIFSSVLRACAGFGNLDVGEEVHGRIIKYGLDVDHVVETSLLGMYGDLGCLSNAKKVFD 158
Query: 202 SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
+ M D+ W+S+I + +G E L++F + V+ D +T L++ AC G +
Sbjct: 159 N--MTTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDVELDSVTMLSIAGACGELGFL 216
Query: 262 KEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNG 321
+ A C+ + + + +V + +R + A + + + AS +
Sbjct: 217 RLAKSVHGCIIRQRIETRGPLNDALVLMYSRCDDFSSAERIFSNMFNRSIASWTAMI--S 274
Query: 322 CMNHGK 327
C N +
Sbjct: 275 CYNRSR 280
>28637.m000207 pentatricopeptide repeat-containing protein, putative
Length = 519
Score = 272 bits (695), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/424 (33%), Positives = 239/424 (56%), Gaps = 5/424 (1%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML + + P+ TF + +S L LG +H K G + FV ++++ Y+
Sbjct: 90 MLLLNIKPNEFTFATVIHSSTGLKNIYLGKQLHARTMKMGLNTIVFVGSAMLDFYAKLCS 149
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AR F+ I N+VS+ +++ GY K G I A Q+F MPE++V+SW+ ++ G+ +
Sbjct: 150 FEEARNAFEDIQKPNVVSYTTLIHGYLKKGKIDDALQLFQEMPERNVVSWNAMVGGFSQM 209
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +EA+++F EM G PN+ T + + A++ +L G+ H + + + +
Sbjct: 210 GHNEEAVSLFIEMLREGFMPNQSTFPCAITSAANMASLGMGKSFHACAVKSLCTSDVFVC 269
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
SLV YAKCG+++++L VF + + WN++I GFA +G ++++ F M G
Sbjct: 270 NSLVSFYAKCGSMEDSLLVFNE--LPDRNTVSWNAVICGFAQNGRGEDAVIFFERMRAAG 327
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN--GMTPKSEHYACMVDVMARAGQVAE 298
++P+ +T L LL AC H GLV++ + +F+ + + G+ K EHYACMVD+++R G++ E
Sbjct: 328 LRPNSVTLLGLLCACNHAGLVEKGYMYFNQMRQEEPGIL-KPEHYACMVDLLSRFGRLKE 386
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
A +FL +P P ALL GC H +L++ +K++ L+P YV LSN Y+
Sbjct: 387 AAKFLHDLPFDPGTGFWKALLGGCHIHSNAELSDLAAQKILALDPEDVSSYVMLSNAYSA 446
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQ 418
RW + ++R M+ G+K+ PG S++E+ +H F+ DK+H E+IY L F V Q
Sbjct: 447 AGRWQQVSTIRREMKEKGLKRIPGCSWIEVRSKIHVFLNSDKNHHQKEEIYSFLKFCVEQ 506
Query: 419 MKHI 422
++ I
Sbjct: 507 LREI 510
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 125/263 (47%), Gaps = 36/263 (13%)
Query: 97 QVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLG 156
++FD MPE DVLS + LI + R+ Y+EA+ +F M + KPNE T +V+ + L
Sbjct: 54 ELFDEMPELDVLSVTTLIGRFARQHRYEEAMCLFSRMLLLNIKPNEFTFATVIHSSTGLK 113
Query: 157 ALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS-------- 208
+ G+ +H + L + + ++++D YAK + +EA + F + KP+
Sbjct: 114 NIYLGKQLHARTMKMGLNTIVFVGSAMLDFYAKLCSFEEARNAFED-IQKPNVVSYTTLI 172
Query: 209 ----------------------DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
+V WN+M+GGF+ G +E++ LF EM G P++
Sbjct: 173 HGYLKKGKIDDALQLFQEMPERNVVSWNAMVGGFSQMGHNEEAVSLFIEMLREGFMPNQS 232
Query: 247 TYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYAC--MVDVMARAGQVAEAYQFLC 304
T+ +++ A+ + F C K+ T S+ + C +V A+ G + ++
Sbjct: 233 TFPCAITSAANMASLGMGKSFHACAVKSLCT--SDVFVCNSLVSFYAKCGSMEDSLLVFN 290
Query: 305 QIPIQPTASMLGALLNGCMNHGK 327
++P + T S A++ G +G+
Sbjct: 291 ELPDRNTVSW-NAVICGFAQNGR 312
>30010.m000680 pentatricopeptide repeat-containing protein, putative
Length = 524
Score = 271 bits (692), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 154/393 (39%), Positives = 225/393 (57%), Gaps = 13/393 (3%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P+ TFP L KA A L +G ++H + K G D FV SL+ YS + NA KV
Sbjct: 84 PNSHTFPSLIKA-ATLSFPSIGTSLHTQVIKRGVLCDPFVQTSLLAFYSQIGCLYNAHKV 142
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
FDGI +V +N+MLD YAK D+ A +F M ++DV+SW+ +I G+ R G + EA+
Sbjct: 143 FDGILHPWIVEYNAMLDAYAKNNDMGSAILLFKRMLKRDVVSWTTVISGFSRSGLFREAI 202
Query: 128 AVF------EEMRVSGPKPNEVTMVSVLCACAHL---GALDKGRMMHHYVIDNELPLTLV 178
F E++ + KPNE T VSVL +CA L G+L G+ MH +I NE+ LT+
Sbjct: 203 NFFRVMIAHEDVSLGLVKPNEATYVSVLSSCASLDEGGSLFLGKQMHGSIIRNEVVLTVF 262
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+ T+L+D Y K G + A+ VF S +K + WN+MI A +G K++LD+F M
Sbjct: 263 IGTALIDFYGKVGCLNSAIRVFNSMTIK--QICSWNAMISCLANNGREKQALDMFEMMEE 320
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVA 297
G P+E+T++ +L+AC LV+ F + + + P EHY C+VD++ RAG +
Sbjct: 321 KGPSPNEVTFVVVLTACTRAKLVQFGMRLFQSMWSDYSVKPIMEHYGCVVDLLGRAGLLR 380
Query: 298 EAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYA 357
EA + + +P +P AS+LGALL C HG LA VG +L+ L+P G++V LSN+ A
Sbjct: 381 EASEIIRSMPFEPDASVLGALLGACKIHGANKLANEVGGRLLRLQPLHCGQFVLLSNINA 440
Query: 358 IFRRWDKARSMREAMERMGVKKSPGYSFVEMHG 390
+W A +R+AM G+ K P YS + G
Sbjct: 441 GLEKWSVAADVRKAMVEAGISKVPAYSLINYMG 473
>28629.m000562 Bipolar kinesin KRP-130, putative
Length = 1530
Score = 270 bits (690), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 135/389 (34%), Positives = 223/389 (57%), Gaps = 34/389 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
++R GV PD+ T PF+ KA + ++G IH + K G D FV +L+ MY
Sbjct: 1172 LIRNGVQPDNYTLPFVIKACRDTVALDMGRLIHCVVLKYGLHLDHFVCAALVDMY----- 1226
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AKC I A+ +FD+MP +D+++W+ +I GY
Sbjct: 1227 --------------------------AKCKVIEDAKLLFDVMPSKDLVTWTVMIGGYAEC 1260
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G+ E+L +F+ +R G P+++ MVS++ ACA LGA++K R +H YV N L ++L
Sbjct: 1261 GNAKESLVLFDHLREEGFVPDKIAMVSIVNACAKLGAMNKARFVHEYVNRNRFSLDVILG 1320
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T+++DMYAKCG + A +F + M +V W++MI + HG K++L+LF M G
Sbjct: 1321 TAMIDMYAKCGDVDSAREIFDN--MHHKNVISWSAMIAAYGYHGQGKKALELFPMMLSSG 1378
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
+ P+ IT+++LL AC+H GLV++ + ++ G+ P +H+ CMVD++ RAGQ+ EA
Sbjct: 1379 ILPNNITFVSLLYACSHAGLVEDGLTLLSLMWESFGVRPDIKHHTCMVDLLGRAGQLTEA 1438
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
++F+ + ++ + +LL C H ++DLAE + L+EL+P G Y+ LSN+YA
Sbjct: 1439 FRFIENMTVEKDEGLWSSLLGACRIHKRIDLAEKAAKSLLELQPQNPGNYILLSNIYANA 1498
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEM 388
+W +R+ M + +KK PGY+++E+
Sbjct: 1499 GQWKDVAKIRDLMTKRKLKKIPGYTWIEL 1527
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 142/269 (52%), Gaps = 10/269 (3%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
NL N +L Y ++ A +FD MP+++ +SWS +I G+V+ G++ + F+E+
Sbjct: 1114 NLTVANKLLYVYVHHKCLTDAYALFDEMPQKNPVSWSIMIGGFVKVGEFMQCYKTFKELI 1173
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
+G +P+ T+ V+ AC ALD GR++H V+ L L + +LVDMYAKC I+
Sbjct: 1174 RNGVQPDNYTLPFVIKACRDTVALDMGRLIHCVVLKYGLHLDHFVCAALVDMYAKCKVIE 1233
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
+A +F +M D+ W MIGG+A G KESL LF + G PD+I +++++A
Sbjct: 1234 DAKLLF--DVMPSKDLVTWTVMIGGYAECGNAKESLVLFDHLREEGFVPDKIAMVSIVNA 1291
Query: 255 CAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASM 314
CA G + +A + + + +N + M+D+ A+ G V A + + + S
Sbjct: 1292 CAKLGAMNKARFVHEYVNRNRFSLDVILGTAMIDMYAKCGDVDSAREIFDNMHHKNVISW 1351
Query: 315 LGALLNGCMNHGKLDLAETVGRKLIELEP 343
A++ HG+ G+K +EL P
Sbjct: 1352 -SAMIAAYGYHGQ-------GKKALELFP 1372
>30131.m006909 pentatricopeptide repeat-containing protein, putative
Length = 684
Score = 266 bits (681), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 150/421 (35%), Positives = 247/421 (58%), Gaps = 9/421 (2%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ + LT + A A +K LG +HG+I + E + +VS++L++MY+S + A
Sbjct: 173 GIRANSLTVSSILPACADYIK--LGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQA 230
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDV----LSWSCLIDGYVRK 120
R VFD + +++VSWN ML Y + +F M ++ + SW+ I G ++
Sbjct: 231 RLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQN 290
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G ++ AL + +M+ SG KPN +T+VS L C +L +L G+ +H YV + + +
Sbjct: 291 GQHELALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTIT 350
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T+LV +YAKCG ++ + HVF + M DV WN+MI + HG ESL LF++M G
Sbjct: 351 TALVLLYAKCGDLELSRHVFNT--MPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSG 408
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVAEA 299
V+P+ +T++ +LS C+H L E F+ + ++ +TP ++HY+CMVDV++RAG++ EA
Sbjct: 409 VEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEA 468
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
Y F+ ++PI+PTA+ GALL C + ++L +L E+EP G YV LSN+
Sbjct: 469 YDFIRKMPIEPTAAAWGALLGACRVYKNVELGTLAASQLFEIEPDNAGNYVLLSNILVTA 528
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
++W +A +R+ M G+ K+PG S+V++ ++ FV DKS+ + IY L I +M
Sbjct: 529 KKWVEASEIRKMMRDKGLAKTPGRSWVQVKNKVYSFVTGDKSNEQKDMIYRFLDEIDEKM 588
Query: 420 K 420
+
Sbjct: 589 R 589
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 124/235 (52%), Gaps = 8/235 (3%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPV----KNLVSWNSMLD 84
+ I+ + D+FV S+ ++ D+ A+K+ D K+LV N+++D
Sbjct: 61 AIDIYSTLLSRNVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALID 120
Query: 85 GYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVT 144
+ KC ++ AR VFD M +DV+SW+ + YV G + + +F EM ++G + N +T
Sbjct: 121 MFGKCKFVNGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLT 180
Query: 145 MVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL 204
+ S+L ACA L GR +H +++ NE+ + + ++LV+MYA +++A VF S
Sbjct: 181 VSSILPACADYIKL--GREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDS-- 236
Query: 205 MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
M D+ WN M+ + + + L LF +M G+K ++ ++ +S C G
Sbjct: 237 MYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNG 291
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 2/167 (1%)
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
GD+ A +FD +PE D+ +W+ LI G+ + G +A+ ++ + +P++ ++SV
Sbjct: 25 GDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVA 84
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
ACA G L + +H I LVL +L+DM+ KC + A VF ++K D
Sbjct: 85 KACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVK--D 142
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
V W SM + G+ ++ + LF EM + G++ + +T ++L ACA
Sbjct: 143 VVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACA 189
>28357.m000095 pentatricopeptide repeat-containing protein, putative
Length = 672
Score = 265 bits (676), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 228/421 (54%), Gaps = 34/421 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+L + P+ +T + A A L LG +H I K G + R V ++++ MY
Sbjct: 266 LLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMY----- 320
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AKCG + +A Q+F MPE+D + W+ +I +
Sbjct: 321 --------------------------AKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQN 354
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G EA+ +F +M G + V++ + L ACA+L AL G+ +H ++I +
Sbjct: 355 GKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAE 414
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
++L+DMY KCG + A VF +M+ + WNS+I + HG ++ SL LF +M G
Sbjct: 415 SALIDMYGKCGNLSVARCVFD--MMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDG 472
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
++PD +T+L +LSAC H G V + +F C+ + G+ + EHYAC+VD+ RAG++ EA
Sbjct: 473 IQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEA 532
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
++ + +P P + G LL C HG ++LAE R L++L+P G YV LSNV+A
Sbjct: 533 FETIKNMPFSPDDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADA 592
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
+W R +R M++ GV+K PGYS++E++ H FVA D SHP S QIY +L ++ ++
Sbjct: 593 GQWGSVRKIRSLMKKRGVQKVPGYSWIEVNKTTHMFVAADGSHPESAQIYSVLNNLLLEL 652
Query: 420 K 420
+
Sbjct: 653 R 653
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 162/334 (48%), Gaps = 38/334 (11%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P+ +TF + A E G +HG + G+ D V+N+L+ MYS F + +A K+
Sbjct: 71 PNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKL 130
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
F+ +P N+V+WN M I G+V+ G DEA
Sbjct: 131 FNTMPDTNVVTWNGM-------------------------------IAGFVQNGFMDEAS 159
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+F EM +G P+ +T S L + +L +G+ +H Y++ + + L + L+++L+D+Y
Sbjct: 160 LLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIY 219
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
KC + A +F+ D+ + ++I G+ +GL ++L++F + + P+ +T
Sbjct: 220 FKCRDVGMACKIFKQS--TNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVT 277
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
++L ACA + + K+G+ + + ++D+ A+ G++ AYQ ++P
Sbjct: 278 LASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMP 337
Query: 308 IQPTASMLGALLNGCMNHGK----LDLAETVGRK 337
+ A A++ C +GK +DL +GR+
Sbjct: 338 -EKDAVCWNAIITNCSQNGKPQEAIDLFRQMGRE 370
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 141/295 (47%), Gaps = 38/295 (12%)
Query: 40 GYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVF 99
G+ D FV +SLI +Y+ I +AR++FD +P K+ V WN ML+G+ KC
Sbjct: 2 GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKC---------- 51
Query: 100 DLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALD 159
G+ + A+ VFE+MR KPN +T SVL CA +
Sbjct: 52 ---------------------GEPNSAVKVFEDMRNCQTKPNSITFASVLSICASEALSE 90
Query: 160 KGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGG 219
G +H VI ++ +LV MY+K G + +AL +F + M ++V WN MI G
Sbjct: 91 FGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNT--MPDTNVVTWNGMIAG 148
Query: 220 FACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPK 279
F +G + E+ LFSEM GV PD IT+ + L + +K+ + ++G+
Sbjct: 149 FVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALD 208
Query: 280 SEHYACMVDVMARAGQVAEAYQFLCQIP----IQPTASMLGALLNGCMNHGKLDL 330
+ ++D+ + V A + Q + TA + G +LNG +N+ L++
Sbjct: 209 VFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNG-LNNDALEI 262
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 123/257 (47%), Gaps = 33/257 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ GV PD +TF + + G IHGYI + G D F+ ++LI
Sbjct: 165 MISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALI-------- 216
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
D Y KC D+ MA ++F D++ + +I GYV
Sbjct: 217 -----------------------DIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLN 253
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G ++AL +F + PN VT+ SVL ACA L L+ G+ +H ++ + L +
Sbjct: 254 GLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVG 313
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
++++DMYAKCG + A +FR M D WN++I + +G +E++DLF +M G
Sbjct: 314 SAIMDMYAKCGRLDLAYQIFRR--MPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREG 371
Query: 241 VKPDEITYLNLLSACAH 257
+ D ++ LSACA+
Sbjct: 372 LSYDCVSISAALSACAN 388
>29729.m002326 pentatricopeptide repeat-containing protein, putative
Length = 656
Score = 265 bits (676), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 138/351 (39%), Positives = 205/351 (58%), Gaps = 7/351 (1%)
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
ARK FD +P K++ +WN+M+ Y G ++ A +F+LMPE++++SW+ LIDGY R G
Sbjct: 287 ARKYFDHMPTKDIAAWNAMITAYVDQGSMAEASNLFNLMPEKNIVSWNALIDGYARNGPE 346
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
+L M S KPNE T+ SVL AC + L + H VI VL L
Sbjct: 347 SNSLRYLILMLRSNFKPNETTITSVLTACDSILELMQA---HGLVIHLGFEQDKVLANGL 403
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
V Y++CG + A +F +K D+ W +MI ++ HG +L +F+ M G KP
Sbjct: 404 VTTYSRCGDVLSARFIFDQLEIK--DIVSWTAMILAYSNHGCGPHALQVFARMLRSGAKP 461
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVAEAYQF 302
D IT++ LLSAC+H GLVK+ FD + G+ P++EHY+C+VD++ RAG++ +A +
Sbjct: 462 DGITFVGLLSACSHAGLVKKGQMLFDSMSCAYGVEPRAEHYSCLVDILGRAGEMNKAMKV 521
Query: 303 LCQIPIQP-TASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRR 361
+ ++P ++LGALL C H + LA +G KLIE EP G YV L+N YA +
Sbjct: 522 VSEMPPHECDGAVLGALLGACRLHKDVGLANHIGEKLIEKEPTSSGSYVLLANAYAACGK 581
Query: 362 WDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML 412
W++ +R+ M+ VKK PG+S +E+ G H F D+SHP E+IY+ L
Sbjct: 582 WNEFAEVRKEMKERNVKKEPGFSQIEVKGKSHVFFVRDRSHPQLEEIYLFL 632
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 144/278 (51%), Gaps = 21/278 (7%)
Query: 50 SLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLS 109
S+I +Y +D+P A +F IP +N+V+ ++M+ GY + G + ARQVFD M E++V S
Sbjct: 87 SMITVYLKNKDLPQAEILFREIPERNVVADSAMISGYVRAGRLDKARQVFDQMVERNVFS 146
Query: 110 WSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI 169
W+ L+ GY + G+ DEA+ +F +M P+ N V+ + + A G +D+ R I
Sbjct: 147 WTSLVSGYFKIGNVDEAMRLFNQM----PEKNVVSWTTAVVGYAQNGFIDEAR-----DI 197
Query: 170 DNELP-LTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKE 228
N++P ++ T++V Y + I EA +F M +++ WN MI G + E
Sbjct: 198 FNQMPEKNIIAWTAMVKSYVENDEIDEAFELFYQ--MPQRNLYSWNIMISGCINANRLNE 255
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVD 288
++ LF+ M + +E+++ L++ A G+++ A +FD + T + M+
Sbjct: 256 AIQLFNSMP----QRNEVSWTTLVTGLARNGMMELARKYFDHMP----TKDIAAWNAMIT 307
Query: 289 VMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
G +AEA +P + S AL++G +G
Sbjct: 308 AYVDQGSMAEASNLFNLMPEKNIVS-WNALIDGYARNG 344
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 157/347 (45%), Gaps = 54/347 (15%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
E + F SL+ Y ++ A ++F+ +P KN+VSW + + GYA+ G I AR +F+
Sbjct: 141 ERNVFSWTSLVSGYFKIGNVDEAMRLFNQMPEKNVVSWTTAVVGYAQNGFIDEARDIFNQ 200
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM----------RVSG-------------- 137
MPE+++++W+ ++ YV + DEA +F +M +SG
Sbjct: 201 MPEKNIIAWTAMVKSYVENDEIDEAFELFYQMPQRNLYSWNIMISGCINANRLNEAIQLF 260
Query: 138 ---PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
P+ NEV+ +++ A G ++ R ++ ++ + T+ VD G++
Sbjct: 261 NSMPQRNEVSWTTLVTGLARNGMMELARKYFDHMPTKDIAAWNAMITAYVDQ----GSMA 316
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
EA ++F LM ++ WN++I G+A +G SL M KP+E T ++L+A
Sbjct: 317 EASNLF--NLMPEKNIVSWNALIDGYARNGPESNSLRYLILMLRSNFKPNETTITSVLTA 374
Query: 255 C--------AHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
C AH GLV + D + NG +V +R G V A Q+
Sbjct: 375 CDSILELMQAH-GLVIHLGFEQDKVLANG----------LVTTYSRCGDVLSARFIFDQL 423
Query: 307 PIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDG-RYVGL 352
I+ S +L NHG A V +++ DG +VGL
Sbjct: 424 EIKDIVSWTAMIL-AYSNHGCGPHALQVFARMLRSGAKPDGITFVGL 469
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 135/303 (44%), Gaps = 29/303 (9%)
Query: 50 SLIHMYSSFRDI--PNARKVFDGIPVKNLVS----WNSMLDGYAKCGDISMARQVFDLMP 103
SL H+ SF + PN K+ IP S N + G + AR+VFD MP
Sbjct: 19 SLRHLNRSFSSLKTPNPSKITTRIPFPVFASDTYESNVKISNLGLRGKVKEARKVFDEMP 78
Query: 104 EQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRM 163
+D +S++ +I Y++ D +A +F E+ P+ N V +++ G LDK R
Sbjct: 79 RRDAVSYASMITVYLKNKDLPQAEILFREI----PERNVVADSAMISGYVRAGRLDKARQ 134
Query: 164 MHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
V D + + TSLV Y K G + EA+ +F M +V W + + G+A +
Sbjct: 135 ----VFDQMVERNVFSWTSLVSGYFKIGNVDEAMRLFNQ--MPEKNVVSWTTAVVGYAQN 188
Query: 224 GLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHY 283
G + E+ D+F++M + I + ++ + + EA+ F + + + +
Sbjct: 189 GFIDEARDIFNQMPEKNI----IAWTAMVKSYVENDEIDEAFELFYQMPQRNLY----SW 240
Query: 284 ACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEP 343
M+ A ++ EA Q +P + S L+ G +G ++LA RK + P
Sbjct: 241 NIMISGCINANRLNEAIQLFNSMPQRNEVSWT-TLVTGLARNGMMELA----RKYFDHMP 295
Query: 344 HQD 346
+D
Sbjct: 296 TKD 298
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 98/239 (41%), Gaps = 65/239 (27%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
MLR P+ T + A +L EL + HG + G+E D+ ++N L+ YS D
Sbjct: 356 MLRSNFKPNETTITSVLTACDSIL--EL-MQAHGLVIHLGFEQDKVLANGLVTTYSRCGD 412
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAK--CGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
+ +AR +FD + +K++VSW +M+ Y+ CG
Sbjct: 413 VLSARFIFDQLEIKDIVSWTAMILAYSNHGCG---------------------------- 444
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMM-------------- 164
AL VF M SG KP+ +T V +L AC+H G + KG+M+
Sbjct: 445 -----PHALQVFARMLRSGAKPDGITFVGLLSACSHAGLVKKGQMLFDSMSCAYGVEPRA 499
Query: 165 HHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
HY + LVD+ + G + +A+ V D + +++G H
Sbjct: 500 EHY-------------SCLVDILGRAGEMNKAMKVVSEMPPHECDGAVLGALLGACRLH 545
>28694.m000666 pentatricopeptide repeat-containing protein, putative
Length = 621
Score = 262 bits (670), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/415 (35%), Positives = 229/415 (55%), Gaps = 17/415 (4%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGD 91
IH Y K G+E FV ++LI +Y D+ A +F + K+L SWN+++ +A+ G
Sbjct: 200 IHEYAVKGGFEEYSFVKSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGL 259
Query: 92 ISMARQVFDLMPEQ--------DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEV 143
A ++F + +V+SWS +IDG+ KG EAL +F M+ + N V
Sbjct: 260 CDEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELFRRMQHAKILANAV 319
Query: 144 TMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSG 203
T+ +VL CA L AL GR +H +V+ + +++ LV+MYAKCG ++E +F
Sbjct: 320 TISTVLSLCAELAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGCLKEGHMIFEKT 379
Query: 204 LMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKE 263
K D+ WNSMI G+ HGL +L+ F +M +G KPD +T++ +LS+C+H GLV E
Sbjct: 380 ERK--DLISWNSMITGYGMHGLGMNALETFDQMIKLGFKPDGVTFVAVLSSCSHSGLVHE 437
Query: 264 AWYFFD-CLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGC 322
FD L K + P+ EHYACMVD++ RAG + EA + + +P+ P A + GALLN C
Sbjct: 438 GRRLFDQMLKKYRIEPQMEHYACMVDLLGRAGLLREASEIVKNMPVAPNACVWGALLNSC 497
Query: 323 MNHGKLDLAETVGRKLIELEPHQ-DGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSP 381
H ++AE L L + G Y+ LSN+YA RW+ + +R + + G+KK+P
Sbjct: 498 RMHNNTEIAEETASHLFNLSHRETTGTYMLLSNIYAASGRWEDSARVRTSAKTKGLKKNP 557
Query: 382 GYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK-----HIVDYENQEYY 431
G S++++ ++ F A + EQI+ +L + QM+ H D Q Y
Sbjct: 558 GQSWIKVEKNVYTFSAGNNMQRGFEQIFEILEELTFQMEREGTVHDTDITPQAVY 612
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 150/276 (54%), Gaps = 10/276 (3%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M ++G D TFP + +A A + LG IHG++ + G++S V N LI MY+
Sbjct: 33 MRKIGTLGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKLGR 92
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSCLIDG 116
+ +AR +FD + V++ +SWN+M+ YA D + A ++F M E ++++W+ LI
Sbjct: 93 MRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLISS 152
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
Y R G ++EA+ +F MR+ G + + + V+ CA LGA + +++H Y +
Sbjct: 153 YARSGWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKGGFEEY 212
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
++++L+ +Y K G + A ++F MK + WN++I A GL E+L++FS++
Sbjct: 213 SFVKSALICVYGKHGDVNGAWNLFLE--MKNKSLASWNALITSHAEAGLCDEALEIFSQL 270
Query: 237 HIVG----VKPDEITYLNLLSACAHGGLVKEAWYFF 268
G ++P+ +++ ++ A G KEA F
Sbjct: 271 ERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELF 306
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 114/264 (43%), Gaps = 41/264 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + + +T + A L LG IHG++ +A ++ V N L++MY+
Sbjct: 309 MQHAKILANAVTISTVLSLCAELAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGC 368
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +F+ K+L+SWNSM+ GY G + M
Sbjct: 369 LKEGHMIFEKTERKDLISWNSMITGYGMHG-LGM-------------------------- 401
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR-----MMHHYVIDNELPL 175
AL F++M G KP+ VT V+VL +C+H G + +GR M+ Y I+ ++
Sbjct: 402 ----NALETFDQMIKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLFDQMLKKYRIEPQMEH 457
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSE 235
+VD+ + G ++EA + ++ + P + +W +++ H + + + S
Sbjct: 458 Y----ACMVDLLGRAGLLREASEIVKNMPVAP-NACVWGALLNSCRMHNNTEIAEETASH 512
Query: 236 MHIVGVKPDEITYLNLLSACAHGG 259
+ + + TY+ L + A G
Sbjct: 513 LFNLSHRETTGTYMLLSNIYAASG 536
>30174.m009054 pentatricopeptide repeat-containing protein, putative
Length = 810
Score = 261 bits (667), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 148/435 (34%), Positives = 240/435 (55%), Gaps = 34/435 (7%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G+ PD T L ASA L G +HG++ + G E D F+ SL+ +Y +
Sbjct: 328 MTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGE 387
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+AR +FDG+ K+ VSWN+M+ GY++ G +PE
Sbjct: 388 SSSARLLFDGMEEKSSVSWNAMISGYSQNG-----------LPE---------------- 420
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+AL +F ++ G +P+++ +VSVL AC+ AL G+ H Y + L + +
Sbjct: 421 ----DALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVA 476
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
S +DMYAK G I+E+ VF +K D+ WN++I + HG +ES++LF M VG
Sbjct: 477 CSTIDMYAKSGCIKESRSVFDG--LKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVG 534
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAEA 299
PD T++ +L+ C+H GLV+E +F+ + +G+ PK EHYAC++D++ RAG++ +A
Sbjct: 535 QMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDA 594
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+ + ++P QP + + +LL+ C N G+L++ + V KL+ELEP YV LSN+YA
Sbjct: 595 LRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGS 654
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
RWD R +R+ ++ +G++K G S++E+ G +H FVA D P S+++ M + +M
Sbjct: 655 GRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKLEKKM 714
Query: 420 KHIVDYENQEYYFYD 434
I N +D
Sbjct: 715 CKIGYKPNTSAVLHD 729
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 145/333 (43%), Gaps = 59/333 (17%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
D+ TFP + KA L R LG IHG + K G D FV N+LI MY F
Sbjct: 29 ADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKF--------- 79
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
G + A +VF MP ++++SW+ +I G+ G +
Sbjct: 80 ----------------------GFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCF 117
Query: 128 AVFEEMRV--SGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
+ EM G P+ T+V+VL CA + G +H + L + + SLVD
Sbjct: 118 DMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVD 177
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV-GVKPD 244
MY+KCG + EA +F K + WN+MIGG G + E+ +LF EM + ++ +
Sbjct: 178 MYSKCGYLTEAQMLFDKNNRK--NAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVN 235
Query: 245 EITYLNLLSAC-----------AHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARA 293
E+T LN+L AC HG ++ + +D L NG V A+
Sbjct: 236 EVTVLNILPACLEISQLRSLKELHGYSIRHG-FQYDELVANG----------FVAAYAKC 284
Query: 294 GQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
G + A + + + T + AL+ GC +G
Sbjct: 285 GMLICAERVFYSMETK-TVNSWNALIGGCAQNG 316
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 122/254 (48%), Gaps = 34/254 (13%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ PD T + A + ++G+ IHG K G D V+NSL+ M
Sbjct: 129 GLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDM---------- 178
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
Y+KCG ++ A+ +FD ++ +SW+ +I G KG
Sbjct: 179 ---------------------YSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIF 217
Query: 125 EALAVFEEMRVSGP-KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
EA +F EM++ + NEVT++++L AC + L + +H Y I + ++
Sbjct: 218 EAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGF 277
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
V YAKCG + A VF S M+ V WN++IGG A +G +++L+L+ +M G+ P
Sbjct: 278 VAAYAKCGMLICAERVFYS--METKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVP 335
Query: 244 DEITYLNLLSACAH 257
D T +LL A AH
Sbjct: 336 DWFTIGSLLLASAH 349
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 132/272 (48%), Gaps = 41/272 (15%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGD 91
+HGY + G++ D V+N + YAKCG
Sbjct: 258 LHGYSIRHGFQYDELVANGFVA-------------------------------AYAKCGM 286
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
+ A +VF M + V SW+ LI G + GD +AL ++ +M SG P+ T+ S+L A
Sbjct: 287 LICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLA 346
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVF 211
AHL +L G+ +H +V+ + L + + SL+ +Y CG A +F G+ + S V
Sbjct: 347 SAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLF-DGMEEKSSV- 404
Query: 212 IWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG---LVKEAWYFF 268
WN+MI G++ +GL +++L LF ++ G +P +I +++L AC+ L KE
Sbjct: 405 SWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKET---- 460
Query: 269 DCLGKNGMTPKSEHYAC-MVDVMARAGQVAEA 299
C + + AC +D+ A++G + E+
Sbjct: 461 HCYALKALLMEDVFVACSTIDMYAKSGCIKES 492
>29729.m002372 pentatricopeptide repeat-containing protein, putative
Length = 833
Score = 260 bits (665), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 139/415 (33%), Positives = 229/415 (55%), Gaps = 34/415 (8%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V PD + A L K +LG IHG++ K+G + D FV++SL+ MYS F
Sbjct: 439 VKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKF------- 491
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
G P + A +F MP +++++W+ +I Y R D
Sbjct: 492 ----GFPER--------------------AGNIFSDMPLKNLVAWNSIISCYCRNNLPDL 527
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
++ +F ++ + P+ V+ SVL A + + AL KG+ +H Y++ +P L + +L+D
Sbjct: 528 SINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLID 587
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MY KCG ++ A H+F + ++ WNSMIGG+ HG ++++LF EM G+KPD+
Sbjct: 588 MYIKCGLLKYAQHIFER--ISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDD 645
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVAEAYQFLC 304
+T+L+LLS+C H GL++E + F+ + K G+ P+ EHY +VD+ RAG + +AY F+
Sbjct: 646 VTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAYSFVK 705
Query: 305 QIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDK 364
+P++P S+ +LL C H L+L E V KL+ +EP + YV L N+Y WD+
Sbjct: 706 NMPVEPDRSIWLSLLCSCKIHLNLELGEMVANKLLNMEPSKGSNYVQLLNLYGEAELWDR 765
Query: 365 ARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
++R +M+ G+KK+PG S++E+ + F + D S P + +IY L + M
Sbjct: 766 TANLRASMKEKGLKKTPGCSWIEVRNKVDVFYSGDCSSPITTEIYDTLSSLKRNM 820
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 116/261 (44%), Gaps = 57/261 (21%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V+ T+P L KA A L + G IH I G SD+++++SLI++Y
Sbjct: 49 VYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIY---------- 98
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ-----DVLSWSCLIDGYVRK 120
KCG + A +VFD +P+ DV W+ +IDGY R
Sbjct: 99 ---------------------VKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRF 137
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +E + F M+ SG K +G+ +H Y++ N L L
Sbjct: 138 GQLEEGMVQFGRMQSSGYK--------------------EGKQIHSYIVRNMLNFDPFLE 177
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T+L+D Y KCG EA ++F+ L S++ WN MIGGF +GL + SL+ +
Sbjct: 178 TALIDTYFKCGRPTEARYLFKK-LKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTEN 236
Query: 241 VKPDEITYLNLLSACAHGGLV 261
VK ++ LSAC G V
Sbjct: 237 VKVVSSSFTCTLSACGQGEFV 257
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 117/217 (53%), Gaps = 15/217 (6%)
Query: 72 PVKNLVSWNS-MLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVF 130
P+++ ++ S +L Y+K GD + A +F M E+DV++W +I G+ + Y EAL F
Sbjct: 372 PLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFF 431
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
M KP+ M S++ AC L +D G +H +VI + L L + + +SL+DMY+K
Sbjct: 432 RAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKF 491
Query: 191 GAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLN 250
G + A ++F M ++ WNS+I + + L S++LFS++ + PD +++ +
Sbjct: 492 GFPERAGNIFSD--MPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTS 549
Query: 251 LLSACA-----------HGGLVKEAWYFFDCLGKNGM 276
+L+A + HG LV+ W FD +N +
Sbjct: 550 VLAAISSVAALLKGKSVHGYLVR-LWIPFDLQVENTL 585
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 99/177 (55%), Gaps = 2/177 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
S+L Y KC I A +VF+ +P++++ W+ LI YV G +AL ++++M++
Sbjct: 280 TSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVL 339
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
+ T+++VL + + G D GR++H ++ L ++ ++++L+ MY+K G A +
Sbjct: 340 SDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSI 399
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
F + MK DV W S+I GF + KE+LD F M VKPD +++SAC
Sbjct: 400 FST--MKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACT 454
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 59/237 (24%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+LR ++PD ++F + A + + G ++HGY+ + D V N+LI MY
Sbjct: 535 VLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGL 594
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A+ +F+ I KNLV+WNSM+ GY G+ S A ++FD
Sbjct: 595 LKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFD-------------------- 634
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-------RM-------MHH 166
EMR SG KP++VT +S+L +C H G +++G +M M H
Sbjct: 635 -----------EMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEH 683
Query: 167 YVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
YV ++VD+Y + G + +A ++ ++P D IW S++ H
Sbjct: 684 YV-------------NIVDLYGRAGCLGDAYSFVKNMPVEP-DRSIWLSLLCSCKIH 726
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 114 IDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL 173
I V++ Y EAL ++ + V + T S+L ACA L L G+ +H +I L
Sbjct: 28 IKSLVQQRQYIEALKLYTKSPVYTTR---FTYPSLLKACASLSNLQYGKTIHSSIITTGL 84
Query: 174 PLTLVLRTSLVDMYAKCGAIQEALHVF----RSGLMKPSDVFIWNSMIGGFACHGLVKES 229
+ +SL+++Y KCG +A+ VF +SG+ DV IWNS+I G+ G ++E
Sbjct: 85 HSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGV-SVDDVTIWNSIIDGYFRFGQLEEG 143
Query: 230 LDLFSEMHIVGVK 242
+ F M G K
Sbjct: 144 MVQFGRMQSSGYK 156
>27828.m000099 pentatricopeptide repeat-containing protein, putative
Length = 939
Score = 260 bits (665), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 143/440 (32%), Positives = 238/440 (54%), Gaps = 43/440 (9%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
MLR+ + PD T+ + KA + G+ IH I K+G D FV +LI MY
Sbjct: 470 MLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMY----- 524
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
KCG I A+++ D + +Q ++SW+ +I G+
Sbjct: 525 --------------------------CKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLL 558
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
++A + F EM KP+ T VL ACA+L ++ G+ +H +I EL + +
Sbjct: 559 KHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYIT 618
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
++LVDMY+KCG +Q++ VF K D WN+MI G+A HGL +E+L F M +
Sbjct: 619 STLVDMYSKCGNMQDSALVFEKAPNK--DFVTWNAMICGYAQHGLGEEALGYFERMQLEN 676
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDC-LGKNGMTPKSEHYACMVDVMARAGQVAEA 299
V+P+ T++++L ACAH G + + ++F+ L + G+ P+ EHY+CM+D++ R+G+++EA
Sbjct: 677 VRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEA 736
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+ + ++P + A + LL+ C HG +++AE +++LEP + LSN+YA
Sbjct: 737 LKLIQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADA 796
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
W K MR+ M +KK PG S++E+ +H F+ +K+HP E+IY +L ++ +M
Sbjct: 797 GMWGKVSEMRKMMRYNKLKKEPGCSWIEVKDEVHAFLVGNKTHPRYEEIYKILSVLLDEM 856
Query: 420 KHI---------VDYENQEY 430
K I +D E++EY
Sbjct: 857 KWIGYIPDIDFLIDEESEEY 876
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 162/353 (45%), Gaps = 43/353 (12%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
+ LD YAKCG ++ A+++F+ +P+ + ++ +I G VR EAL F+ + SG
Sbjct: 316 TATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLG 375
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
NE+++ ACA + GR +H + + L + + S++DMY KC A+ EA +
Sbjct: 376 FNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCM 435
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F M+ D WN++I +G +E+L+LF+ M + ++PD+ TY ++L AC+
Sbjct: 436 FDE--MERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQ 493
Query: 260 LVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQF----------------- 302
+ + + K+G+ S ++D+ + G + EA +
Sbjct: 494 ALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIA 553
Query: 303 -----------------LCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQ 345
+ ++ ++P +L+ C N + L + + ++I+LE H
Sbjct: 554 GFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHS 613
Query: 346 DGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAH 398
D Y+ + + K +M+++ + +K+P FV + + + H
Sbjct: 614 D-VYI----TSTLVDMYSKCGNMQDSA--LVFEKAPNKDFVTWNAMICGYAQH 659
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 152/300 (50%), Gaps = 4/300 (1%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G H + +G+ D ++SN L+ MY + A KVF+ + ++++S+N+M+ GYA
Sbjct: 62 GKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYAD 121
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM-RVSGPKPNEVTMVS 147
G++++A + F P++DV+SW+ ++ G+++ G+ +++ VF +M R ++ T
Sbjct: 122 AGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAV 181
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP 207
VL AC+ L G +H ++ +V ++L+DMYAKC + ++L +F +K
Sbjct: 182 VLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVK- 240
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYF 267
+ W+++I G + L+LF EM VG+ + Y ++ +CA +K
Sbjct: 241 -NWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQL 299
Query: 268 FDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
K +D+ A+ G +A+A + +P + + A++ GC+ + K
Sbjct: 300 HAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLP-KHSLQCYNAIIVGCVRNEK 358
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 102/183 (55%), Gaps = 2/183 (1%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
N+ NS+LD Y KC +S A +FD M +D +SW+ +I + + G+ +E L +F M
Sbjct: 412 NICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASML 471
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
+P++ T SVL AC+ AL+ G +H+ +I + L L + +L+DMY KCG I+
Sbjct: 472 RLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIE 531
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
EA + ++ + WN++I GF +++ F EM + VKPD TY +L A
Sbjct: 532 EAKKIHDR--IEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDA 589
Query: 255 CAH 257
CA+
Sbjct: 590 CAN 592
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 152/366 (41%), Gaps = 67/366 (18%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D TF + KA + L LG+ +HG I + G+
Sbjct: 175 DQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGF--------------------------- 207
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
K++V+ +++LD YAKC + + ++F +P ++ + WS +I G V+ ++ L
Sbjct: 208 ----YKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLE 263
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
+F+EM+ G ++ SV +CA L AL G +H + + + + + T+ +DMYA
Sbjct: 264 LFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYA 323
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
KCG++ +A +F S + + +N++I G + E+L F + G+ +EI+
Sbjct: 324 KCGSLADAQRIFNS--LPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISL 381
Query: 249 LNLLSACA-----------HGGLVKEAWYFFDCLGKN-----GMTPKSEHYACMVDVMAR 292
SACA H VK C+ + G CM D M R
Sbjct: 382 SGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMER 441
Query: 293 AGQVA------------------EAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETV 334
V+ + + ++ ++P G++L C + L+ +
Sbjct: 442 RDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEI 501
Query: 335 GRKLIE 340
++I+
Sbjct: 502 HNRIIK 507
>29726.m003970 pentatricopeptide repeat-containing protein, putative
Length = 623
Score = 259 bits (663), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 140/416 (33%), Positives = 237/416 (56%), Gaps = 5/416 (1%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD T+ L A L+ G +HG + ++G+ S NS++ +Y+ F + +A KV
Sbjct: 201 PDQWTYSALISACTESLEFLSGCMLHGLVIRSGWSSAMEAKNSILSLYAKFGSLNDALKV 260
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
+ VSWN+++D Y K G ++ A +F +PE++++SW+ +I GY R G +EAL
Sbjct: 261 VESTGRLTQVSWNAIIDAYMKVGYVNEAYLMFQSLPEKNIVSWTSMITGYARNGYGEEAL 320
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
F M + P++ T +VL AC+ L L GRM+H I N L + LV+MY
Sbjct: 321 RFFVAMASNCFLPDDFTFGAVLHACSSLAVLGHGRMVHGCAIRNGFSTYLYVGNGLVNMY 380
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
AKCG + ++ F K D+ +N+++ F HG E+L L+ +M G KPD++T
Sbjct: 381 AKCGDLDGSILAFHDICAK--DLVSFNALLFAFGLHGKASEALQLYEDMMTCGTKPDKMT 438
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
++ LL C+H GL++E FF+ + +G++ +++H ACMVD++ R G +AEA + + +
Sbjct: 439 FIGLLMTCSHSGLIEEGRLFFNSMKSVHGLSYEADHVACMVDMLGRGGYLAEAKELVKKY 498
Query: 307 PIQP--TASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDK 364
AS ALL C HG++++ +G+ L LEP+++ YV SN+Y + +W +
Sbjct: 499 SKTSDVEASSCEALLGACSAHGEVEMGTYLGKTLKTLEPNKEISYVLQSNLYCVRGQWKE 558
Query: 365 ARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
A +R+AM G+KK PG S++E+ + FVA + +P ++++Y L F+ +M+
Sbjct: 559 AEMVRKAMVDEGLKKMPGCSWIEVRNKVTAFVAGNHLYPYTDELYKTLYFLEFEMR 614
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 146/325 (44%), Gaps = 29/325 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M PDH TF A A G IH + GY S V+NSLI MY D
Sbjct: 62 MRNTNTKPDHFTFTATLSACAGAGSFPFGTKIHALVIILGYHSSLPVNNSLIDMYGKCFD 121
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+A +VF + N VSW S+L Y G S A ++F+LMP + ++W+ +I G R
Sbjct: 122 AFSAGQVFKEMGDINEVSWCSLLFAYTNSGRFSEASEIFNLMPRKFEIAWNTMIAGLGRY 181
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G+ + L +F EMR S +P++ T +++ AC G M+H VI + + +
Sbjct: 182 GEIELCLDMFREMRESLLEPDQWTYSALISACTESLEFLSGCMLHGLVIRSGWSSAMEAK 241
Query: 181 TSLVDMYAKCGAIQEALHVFRSG-------------------------LMKPS----DVF 211
S++ +YAK G++ +AL V S LM S ++
Sbjct: 242 NSILSLYAKFGSLNDALKVVESTGRLTQVSWNAIIDAYMKVGYVNEAYLMFQSLPEKNIV 301
Query: 212 IWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL 271
W SMI G+A +G +E+L F M PD+ T+ +L AC+ ++ C
Sbjct: 302 SWTSMITGYARNGYGEEALRFFVAMASNCFLPDDFTFGAVLHACSSLAVLGHGRMVHGCA 361
Query: 272 GKNGMTPKSEHYACMVDVMARAGQV 296
+NG + +V++ A+ G +
Sbjct: 362 IRNGFSTYLYVGNGLVNMYAKCGDL 386
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 108/232 (46%), Gaps = 40/232 (17%)
Query: 74 KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM 133
NL S + G I AR++FD MP +D ++W+ +I Y + G + EAL++F +M
Sbjct: 3 SNLFRITSKISALGSSGYIVHARKLFDEMPNRDTVAWNSMITSYSQLGFHQEALSIFYQM 62
Query: 134 RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI 193
R + KP+ T + L ACA G+ G +H VI +L + SL+DMY KC
Sbjct: 63 RNTNTKPDHFTFTATLSACAGAGSFPFGTKIHALVIILGYHSSLPVNNSLIDMYGKCFDA 122
Query: 194 QEALHVFR-------------------SG-LMKPSDVF---------IWNSMIGGFACHG 224
A VF+ SG + S++F WN+MI G +G
Sbjct: 123 FSAGQVFKEMGDINEVSWCSLLFAYTNSGRFSEASEIFNLMPRKFEIAWNTMIAGLGRYG 182
Query: 225 LVKESLDLFSEMHIVGVKPDEITYLNLLSACA-----------HGGLVKEAW 265
++ LD+F EM ++PD+ TY L+SAC HG +++ W
Sbjct: 183 EIELCLDMFREMRESLLEPDQWTYSALISACTESLEFLSGCMLHGLVIRSGW 234
>30170.m014308 pentatricopeptide repeat-containing protein, putative
Length = 708
Score = 259 bits (661), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 147/417 (35%), Positives = 221/417 (52%), Gaps = 34/417 (8%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ P T + A + E G +H Y+ K G+ES ++ +L+ MY+ +A
Sbjct: 308 GINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDA 367
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
RK F+ + +LV W SM I GYV+ G+ +
Sbjct: 368 RKGFNYLQQPDLVLWTSM-------------------------------IAGYVQNGENE 396
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
+AL+++ M++ G PNE+TM SVL AC++L A D+GR +H I L L + + ++L
Sbjct: 397 DALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALS 456
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
MYAKCG ++E VFR M D+ WN+MI G + +G KE+L+LF EM KPD
Sbjct: 457 TMYAKCGNLEEGNIVFRR--MPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPD 514
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
++T++N+LSAC+H GLV W +F + + G+ PK EHYACMVDV++RAG++ EA +F+
Sbjct: 515 DVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFI 574
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWD 363
I + LL C N+ +L G KL+EL + YV LS +Y R +
Sbjct: 575 ESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSGIYTALGRPE 634
Query: 364 KARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
+R M+ GV K PG S++E+ +H FV D+ HP +I + + QMK
Sbjct: 635 DVERVRSMMKVRGVSKEPGCSWIELKSNVHVFVVGDQMHPCIGEIRTEILRLSKQMK 691
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 131/254 (51%), Gaps = 5/254 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
+S+L+ Y K G + AR+VFD MPE++ ++W+ +I GY + EA VFE MR
Sbjct: 150 SSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEED 209
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
NE SVL A A +D G+ +H + L + L + +LV MYAKCG++ ++L V
Sbjct: 210 VNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQV 269
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F + + W++MI G+A G ++L LFS MH G+ P E T + +L+AC+
Sbjct: 270 FE--MSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDAC 327
Query: 260 LVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA---YQFLCQIPIQPTASMLG 316
V+E + L K G + +VD+ A++G +A + +L Q + SM+
Sbjct: 328 AVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIA 387
Query: 317 ALLNGCMNHGKLDL 330
+ N L L
Sbjct: 388 GYVQNGENEDALSL 401
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 112/178 (62%), Gaps = 2/178 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N+++ YAKCG + + QVF++ +++ ++WS +I GY + GD +AL +F M +G
Sbjct: 251 NALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGIN 310
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
P+E T+V VL AC+ A+++G+ +H+Y++ L + T+LVDMYAK G ++A
Sbjct: 311 PSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKG 370
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
F ++ D+ +W SMI G+ +G +++L L+ M + G+ P+E+T ++L AC++
Sbjct: 371 FN--YLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSN 426
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 94/179 (52%), Gaps = 4/179 (2%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEA--LAVFEEMRVSG 137
NS+++ YAKC + A+ VFD + +DV+SW+CLI+GY ++G + + +F+ MR
Sbjct: 47 NSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADN 106
Query: 138 PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL 197
PN T + A ++L ++ G+ H I + + +SL++MY K G + EA
Sbjct: 107 ILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAR 166
Query: 198 HVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
VF M + W +MI G+A L E+ ++F M +E + ++LSA A
Sbjct: 167 EVFDR--MPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALA 223
>30128.m009048 pentatricopeptide repeat-containing protein, putative
Length = 716
Score = 258 bits (660), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 137/416 (32%), Positives = 233/416 (56%), Gaps = 34/416 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R V P+ TF + ++ A + +LG +H ++ K G + + FVSN+L
Sbjct: 234 MRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNAL--------- 284
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+D YAKCG + + ++F +P ++ ++W+ +I GYV+
Sbjct: 285 ----------------------MDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQS 322
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
GD D+AL++++ M + +EVT SVL ACA L A++ G +H + +V+
Sbjct: 323 GDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVG 382
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+DMYAKCG+I+ A VF ++ D WN+MI G++ HGLV E+L F M
Sbjct: 383 NALIDMYAKCGSIKNARLVF--DMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETE 440
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
P+++T++++LSAC++ GL+ +F + ++ G+ P EHY CMV ++ R+G + +A
Sbjct: 441 CVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKA 500
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+ + +IP++P + ALL C+ H +DL +++++++P + +V LSN+YA
Sbjct: 501 VKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYART 560
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFI 415
RRW+ S+R+ M+ GVKK PG S++E G +H F D SHP + I ML ++
Sbjct: 561 RRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGDTSHPDMKMISGMLEWL 616
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 146/316 (46%), Gaps = 34/316 (10%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGY 86
EL ++H I K G+ES+ FV +LI D Y
Sbjct: 58 ELAYSLHACIYKLGHESNAFVGTALI-------------------------------DAY 86
Query: 87 AKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMV 146
A CG ++ ARQ FD + +D++SW+ ++ Y + ++L +F EMR+ G PN T
Sbjct: 87 AVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFA 146
Query: 147 SVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK 206
VL AC L A G+ +H V+ + L + L+D+Y K G + L VF M
Sbjct: 147 GVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEE--MP 204
Query: 207 PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWY 266
DV W+ MI +A +E+++LF +M V P++ T+ ++L +CA ++
Sbjct: 205 KHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQ 264
Query: 267 FFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
+ K G+ ++DV A+ G++ + + ++P + + ++ G + G
Sbjct: 265 VHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTW-NTMIVGYVQSG 323
Query: 327 KLDLAETVGRKLIELE 342
D A ++ + ++E +
Sbjct: 324 DGDKALSLYKNMLECQ 339
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 130/313 (41%), Gaps = 51/313 (16%)
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
MP+++ +S+ LI GYV+ DE + +F + G + N ++L + +
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA 221
+H + + T+L+D YA CG++ A F + K D+ W M+ +A
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACK--DMVSWTGMVACYA 118
Query: 222 CHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC-----------AHGGLVKEAW----- 265
+ ++SL LF+EM +VG P+ T+ +L AC HG ++K +
Sbjct: 119 ENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLY 178
Query: 266 -------------------YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
F+ + K+ + P ++ M+ A++ Q EA + Q+
Sbjct: 179 VGVGLLDLYTKFGDANDVLRVFEEMPKHDVIP----WSFMISRYAQSNQSREAVELFGQM 234
Query: 307 P---IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYV---GLSNVYAIFR 360
+ P ++L C + L L + V ++++ DG L +VYA
Sbjct: 235 RRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGL--DGNVFVSNALMDVYAKCG 292
Query: 361 RWDKARSMREAME 373
R D SM+ ME
Sbjct: 293 RLDN--SMKLFME 303
>29726.m003908 pentatricopeptide repeat-containing protein, putative
Length = 710
Score = 258 bits (658), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 140/390 (35%), Positives = 218/390 (55%), Gaps = 1/390 (0%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G P+ + L + G + + K G++ F+ +++IH+Y++
Sbjct: 321 MISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGR 380
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I A F +N+ SWN+++ GY + I A ++F+ MPE+DV SWS +I GY +
Sbjct: 381 INEACLQFRIGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQN 440
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+ AL +F +M SG KPNEVTMVSVL A A G L +GR H YV +N + ++ L
Sbjct: 441 EQPNLALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDNLS 500
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+++DMYAKCG+I AL VF K S V WN++I G A HG SL +FS++
Sbjct: 501 AAIIDMYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKIFSDLERRH 560
Query: 241 VKPDEITYLNLLSACAHGGLVKEA-WYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
+K + IT++ +L+AC H GLV+ +F ++ + P +HY CMVD++ RAG++ EA
Sbjct: 561 IKLNAITFIGVLTACCHVGLVESGKRHFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLEEA 620
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+ + +P++ + G LL C HG +D+ E L LEP V LSN+YA
Sbjct: 621 EEMIRSMPMKADVVIWGTLLAACRTHGNVDVGERAAENLARLEPSHGASRVLLSNMYADA 680
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMH 389
+W+ A +R AM+ +++ PGYS V ++
Sbjct: 681 GKWEDAFLVRRAMQSHRMQRLPGYSGVALY 710
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 182/361 (50%), Gaps = 30/361 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M VGV P+ +T L A + +HG + K +E VS +L+ MY
Sbjct: 189 MRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMYCVCSS 248
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ AR +FD +P KN+VSWN ML+GY+K G + AR VF+ +P +D+++W +IDGYVR
Sbjct: 249 LVEARALFDEMPEKNIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTIIDGYVRV 308
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+EAL ++ M +G +PN+V MV ++ C A+ +G+ + V+ ++
Sbjct: 309 ERINEALMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQ 368
Query: 181 TSLVDMYAKCGAIQEALHVFRSGL-----------------------------MKPSDVF 211
++++ +YA CG I EA FR G M DVF
Sbjct: 369 STIIHLYAACGRINEACLQFRIGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERDVF 428
Query: 212 IWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL 271
W++MI G+ + +L+LF +M G+KP+E+T +++LSA A G +KE + + +
Sbjct: 429 SWSTMISGYTQNEQPNLALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYV 488
Query: 272 GKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ-PTASMLGALLNGCMNHGKLDL 330
N +T A ++D+ A+ G + A + +I + T S A++ G HG +L
Sbjct: 489 HNNSITVSDNLSAAIIDMYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVHGHANL 548
Query: 331 A 331
+
Sbjct: 549 S 549
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 164/335 (48%), Gaps = 36/335 (10%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G IH ++K+G S+ F+ NSLI+MY + +A+ +FD P + VS+N M+ GY K
Sbjct: 85 GKQIHCLVSKSGLGSNNFIQNSLINMYGKCGLLVDAKSIFDVCPRSDPVSYNVMISGYVK 144
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
G + A ++FD MP + +S++ +I G+ + +++A+ +F++MR G PNEVT+ ++
Sbjct: 145 SGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVELFKQMRNVGVVPNEVTIATL 204
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
+ A +H G + RM+H VI +++ T+L+ MY C ++ EA +F M
Sbjct: 205 VSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMYCVCSSLVEARALFDE--MPEK 262
Query: 209 DVFIWNSMIGGFACHGLV-------------------------------KESLDLFSEMH 237
++ WN M+ G++ G V E+L ++ M
Sbjct: 263 NIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTIIDGYVRVERINEALMMYRSMI 322
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVA 297
G +P+++ ++L+S C + E + K G + ++ + A G++
Sbjct: 323 SAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGRIN 382
Query: 298 EA-YQFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
EA QF +I + + AL+ G + + +D A
Sbjct: 383 EACLQF--RIGSKENVASWNALIAGYVRNRMIDRA 415
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 104/240 (43%), Gaps = 46/240 (19%)
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR 201
E+ +VS L C+ L +G+ +H V + L ++ SL++MY KCG + +A +F
Sbjct: 66 ELVLVSALKFCSDHLFLSQGKQIHCLVSKSGLGSNNFIQNSLINMYGKCGLLVDAKSIFD 125
Query: 202 --------------SGLMKPSDV---------------FIWNSMIGGFACHGLVKESLDL 232
SG +K + + +MI GF+ + ++++L
Sbjct: 126 VCPRSDPVSYNVMISGYVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVEL 185
Query: 233 FSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKS--EHYACMVDVM 290
F +M VGV P+E+T L+SA +H G + + C +G+ K E + + +
Sbjct: 186 FKQMRNVGVVPNEVTIATLVSAYSHFGGI------WACRMLHGLVIKMLFEEFVLVSTNL 239
Query: 291 AR----AGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQD 346
R + EA ++P + S +LNG G +D A V ++ P++D
Sbjct: 240 LRMYCVCSSLVEARALFDEMPEKNIVS-WNVMLNGYSKAGFVDSARVVFERI----PNKD 294
>29751.m001897 pentatricopeptide repeat-containing protein, putative
Length = 547
Score = 256 bits (653), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 143/422 (33%), Positives = 225/422 (53%), Gaps = 44/422 (10%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P+ P + +A + + G +H I + +ESD V+ +LI MYS R + ARKV
Sbjct: 128 PNKFVIPSVLRACGHVFDLQTGKILHSVILRHLFESDVVVNTALIDMYSRCRHVEKARKV 187
Query: 68 FDGIPVK-----------------------------------NLVSWNSMLDGYAKCGDI 92
FDG+ K NLV+WN+++ G+A+ GD
Sbjct: 188 FDGMQEKDLVALNAMVLGYAQNGFAKEGFLLVEQMQMLDIKPNLVTWNTLISGFAQAGDK 247
Query: 93 SMARQVFDLMP----EQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
M +++F LM E DV+SW+ +I +V+ + A A F++M G PN T+ S+
Sbjct: 248 VMVQELFGLMSMHGFEPDVISWTSVISRFVQNSHNEAAFAAFKQMLQHGAYPNSATISSL 307
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
L ACA L + GR +H Y + + +R+++VDMY+KCG I EA +F M
Sbjct: 308 LPACASLANVRHGRELHGYAFAIGVEEDIYVRSAIVDMYSKCGLISEARMLFSK--MPER 365
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP-DEITYLNLLSACAHGGLVKEAWYF 267
WNSMI G+A HG E+++LF++M K D +++ +L+AC+HG LV+
Sbjct: 366 HTVTWNSMIFGYANHGYCDEAIELFNQMEKTEAKKIDHLSFTAVLTACSHGRLVELGQSL 425
Query: 268 FDCL-GKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
F + K + P+ EHYACM+D++ RAG+++EAY + +P++P + GALL C HG
Sbjct: 426 FLLMHEKYKIVPRLEHYACMIDLLGRAGKLSEAYDMIKTMPVEPDLFVWGALLGACRQHG 485
Query: 327 KLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFV 386
++DLAE R L ELEP G + LSN+YA W+ ++ +R ++K YS++
Sbjct: 486 EIDLAEIAARHLAELEPRNAGNNMLLSNLYADAGSWENVAKLKMG-KRKRLRKFSAYSWI 544
Query: 387 EM 388
++
Sbjct: 545 QL 546
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 150/317 (47%), Gaps = 20/317 (6%)
Query: 29 GLAIHG------YITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNS- 81
G+ HG I ++ S + LI Y+ + + + + V L S N+
Sbjct: 7 GITFHGPHFKIPIIYRSFQSSSLHTFDELIKTYTRDHALNQGKHLHARLIVSGLASSNNF 66
Query: 82 ---MLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP 138
++ Y + +S+ R++FD +P+ + + LI Y R G Y + L VF EM+
Sbjct: 67 ASKLISFYTETRQLSIVRKLFDRIPKPNFYQRTVLIGAYSRHGFYQDVLDVFSEMQNERL 126
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
+PN+ + SVL AC H+ L G+++H ++ + +V+ T+L+DMY++C +++A
Sbjct: 127 RPNKFVIPSVLRACGHVFDLQTGKILHSVILRHLFESDVVVNTALIDMYSRCRHVEKARK 186
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHG 258
VF M+ D+ N+M+ G+A +G KE L +M ++ +KP+ +T+ L+S A
Sbjct: 187 VFDG--MQEKDLVALNAMVLGYAQNGFAKEGFLLVEQMQMLDIKPNLVTWNTLISGFAQA 244
Query: 259 GLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQ---VAEAYQFLCQIPIQPTASML 315
G F + +G P + ++ + A++ + Q P ++ +
Sbjct: 245 GDKVMVQELFGLMSMHGFEPDVISWTSVISRFVQNSHNEAAFAAFKQMLQHGAYPNSATI 304
Query: 316 GALLNGC-----MNHGK 327
+LL C + HG+
Sbjct: 305 SSLLPACASLANVRHGR 321
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 114/248 (45%), Gaps = 42/248 (16%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML+ G +P+ T L A A L G +HGY G E D +V ++++ MYS
Sbjct: 292 MLQHGAYPNSATISSLLPACASLANVRHGRELHGYAFAIGVEEDIYVRSAIVDMYSKCGL 351
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I AR +F +P ++ V+WNSM+ GYA G C
Sbjct: 352 ISEARMLFSKMPERHTVTWNSMIFGYANHG--------------------YC-------- 383
Query: 121 GDYDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGR----MMHHYVIDNELPL 175
DEA+ +F +M + K + ++ +VL AC+H ++ G+ +MH ++
Sbjct: 384 ---DEAIELFNQMEKTEAKKIDHLSFTAVLTACSHGRLVELGQSLFLLMHE---KYKIVP 437
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSE 235
L ++D+ + G + EA + ++ ++P D+F+W +++G HG + L +
Sbjct: 438 RLEHYACMIDLLGRAGKLSEAYDMIKTMPVEP-DLFVWGALLGACRQHGEI--DLAEIAA 494
Query: 236 MHIVGVKP 243
H+ ++P
Sbjct: 495 RHLAELEP 502
>29805.m001519 pentatricopeptide repeat-containing protein, putative
Length = 501
Score = 256 bits (653), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/347 (36%), Positives = 206/347 (59%), Gaps = 2/347 (0%)
Query: 73 VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEE 132
+ N +S++ Y KCG + A ++F MP ++V++W+ +I G+ ++ D L +F
Sbjct: 138 ISNSYVGSSLITLYGKCGKLDNAHKLFHEMPVRNVVTWTAIISGFAQECQVDVCLELFSV 197
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
MR S KPN+ T S+L AC GAL +G H +I L + +L+ MY K G+
Sbjct: 198 MRNSTLKPNDFTFTSLLSACTGSGALGQGTSAHCQIIQMGFHSYLHVANALISMYCKSGS 257
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
+ +A ++F + K D+ WNSMI G+A HGL +++DLF +M +GVKPD IT+L +L
Sbjct: 258 VHDAFYIFNNIYSK--DIVSWNSMISGYAQHGLAMQAIDLFEKMTKLGVKPDSITFLGVL 315
Query: 253 SACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTA 312
SAC H G V+ +F+ + + + P+ +HY+C+VD++ RAG + EA + ++PI P A
Sbjct: 316 SACRHAGFVQGGRNYFNSMVEYHLRPQLDHYSCLVDLLGRAGLIEEALDIILRMPILPNA 375
Query: 313 SMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAM 372
+ G+LL+ C HG + + + + LEP +V L+N+YA R WDKA +R+ M
Sbjct: 376 VIWGSLLSSCRLHGSVWIGIQAAEQRLLLEPACAATHVQLANLYASVRYWDKAAKVRKVM 435
Query: 373 ERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
+ G+K +PGYS++E+ +HRF A D+S+ +I +L ++ M
Sbjct: 436 KDTGLKTNPGYSWIEIKNKVHRFRAEDRSNTRVGEILTVLDCLLDHM 482
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 101/216 (46%), Gaps = 34/216 (15%)
Query: 13 FPFLAKASACLLKRELG--LAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDG 70
F F + SAC LG + H I + G+ S V+N+LI MY + +A +F+
Sbjct: 208 FTFTSLLSACTGSGALGQGTSAHCQIIQMGFHSYLHVANALISMYCKSGSVHDAFYIFNN 267
Query: 71 IPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVF 130
I K++VSWNSM+ GYA+ G +A Q DL F
Sbjct: 268 IYSKDIVSWNSMISGYAQHG---LAMQAIDL----------------------------F 296
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
E+M G KP+ +T + VL AC H G + GR + +++ L L + LVD+ +
Sbjct: 297 EKMTKLGVKPDSITFLGVLSACRHAGFVQGGRNYFNSMVEYHLRPQLDHYSCLVDLLGRA 356
Query: 191 GAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLV 226
G I+EAL + + P+ V IW S++ HG V
Sbjct: 357 GLIEEALDIILRMPILPNAV-IWGSLLSSCRLHGSV 391
>28838.m000257 Cell division protein ftsH, putative
Length = 1157
Score = 255 bits (652), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 156/428 (36%), Positives = 228/428 (53%), Gaps = 38/428 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G+ P+ LTFPFL KA A + G +H + K G + D +V+N+L++ Y S
Sbjct: 755 MRNEGIRPNSLTFPFLLKACAACFATKEGKQVHVEVIKYGLDCDVYVNNNLVNFYGS--- 811
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
C I A +VFD MPE+ V+SW+ +I V
Sbjct: 812 ----------------------------CKKILDACKVFDEMPERTVVSWNAVITSCVES 843
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
EA+ F +MR G +P+ TMV +L CA +G L GR +H VI+ L L L
Sbjct: 844 LKLGEAIRYFLKMRDFGFEPDGTTMVLMLVICAEMGNLGLGRWIHSQVIERGLVLNYQLG 903
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T+LVDMYAK GA+ A VF MK +V+ W++MI G A HG KE L+LF +M
Sbjct: 904 TALVDMYAKSGAVGYAKLVFDR--MKEKNVWTWSAMILGLAQHGFAKEGLELFLDMMRSS 961
Query: 241 -VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAE 298
+ P+ +T+L +L AC+H GLV + + +F +G G+ P HY MVD++ RAG + E
Sbjct: 962 LIHPNYVTFLGVLCACSHAGLVSDGFRYFHEMGHTYGIKPMMVHYGAMVDILGRAGLLKE 1021
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLD---LAETVGRKLIELEPHQDGRYVGLSNV 355
AY F+ ++P QP + LL+ C H D +A V ++L+ELEP + G +V ++N+
Sbjct: 1022 AYNFITKMPFQPDPIVWRTLLSACSIHDVKDSTGVAYKVRKRLLELEPRRSGNFVMVANM 1081
Query: 356 YAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFI 415
YA W+KA +R M G+KK G S VE+ G++HRF + S E +Y +L +
Sbjct: 1082 YADAGMWEKAAKVRRVMRDGGLKKKAGESCVELSGSIHRFFSGYDSQDDKEGMYQLLDGL 1141
Query: 416 VSQMKHIV 423
M+ +V
Sbjct: 1142 NLHMQMMV 1149
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 113/251 (45%), Gaps = 6/251 (2%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
+S+ H+Y I + D V L+ ++S+ + D+S A+ + D L
Sbjct: 675 SSIKHLYQIHSQIQVSGLQGDTFLVTQLIKFSSL----SPSKDLSYAQSILDHSVHPVPL 730
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
W+ LI GY +AL V+ MR G +PN +T +L ACA A +G+ +H V
Sbjct: 731 PWNILIRGYADSNTPKDALFVYRNMRNEGIRPNSLTFPFLLKACAACFATKEGKQVHVEV 790
Query: 169 IDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKE 228
I L + + +LV+ Y C I +A VF M V WN++I + E
Sbjct: 791 IKYGLDCDVYVNNNLVNFYGSCKKILDACKVFDE--MPERTVVSWNAVITSCVESLKLGE 848
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVD 288
++ F +M G +PD T + +L CA G + + + + G+ + +VD
Sbjct: 849 AIRYFLKMRDFGFEPDGTTMVLMLVICAEMGNLGLGRWIHSQVIERGLVLNYQLGTALVD 908
Query: 289 VMARAGQVAEA 299
+ A++G V A
Sbjct: 909 MYAKSGAVGYA 919
>29805.m001517 pentatricopeptide repeat-containing protein, putative
Length = 654
Score = 254 bits (648), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 135/417 (32%), Positives = 237/417 (56%), Gaps = 3/417 (0%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G P+ +T + +A G+ +H +I E D V N+LI +Y+ + A
Sbjct: 223 GFRPNGVTVVSVLQACGQTQDLAFGMEVHKFIVDNQVEIDISVCNALIGLYAKCGSLDYA 282
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
R++FD + K+ V++ +++ G G + + ++F M Q + +W+ +I G V+ ++
Sbjct: 283 RELFDEMSEKDEVTYGAIISGLMLHGYVDQSLELFRGMKTQILSTWNAVITGLVQNNRHE 342
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
L + EM+ G +PN VT+ SVL A+ +L G+ +H Y I + + T+++
Sbjct: 343 GVLDLVREMQALGFRPNAVTLSSVLSTIAYFSSLKGGKEIHSYAIKIGYHRNIYVATAII 402
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
DMYAK G ++ A VF K + IW ++I +A HG +L LF EM G++PD
Sbjct: 403 DMYAKSGYLRGAQRVFDQS--KDRSLVIWTAIISAYAVHGDANLALGLFHEMLKQGIQPD 460
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFL 303
+T+ +L+ACAH G+V +AW F+ + K G+ P EHYAC+V + +A +++EA +F+
Sbjct: 461 PVTFTAVLAACAHCGMVDKAWEIFESMFKKYGIQPLVEHYACVVGALGKARRLSEAKEFV 520
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWD 363
++PI+P+A + GALL+G ++L ++V L E+EP G YV ++N+Y+ RW
Sbjct: 521 SKMPIEPSAKVWGALLHGASISSDVELGKSVCDYLFEIEPENTGNYVIMANLYSQAGRWK 580
Query: 364 KARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
+A +RE M ++G++K PG S++E L F+A D + E+I+++L ++ M+
Sbjct: 581 EADEVRERMNKVGLQKIPGSSWIETSEGLRSFIATDTCTENVEEIHVILKGLLGLMR 637
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 159/352 (45%), Gaps = 75/352 (21%)
Query: 21 ACLLKR---------ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGI 71
CLLK +LG +HG++ + G+++D FV N+LI YS
Sbjct: 128 TCLLKSLSSFTLSDVKLGKEVHGFVLRTGFDADVFVENALITYYS--------------- 172
Query: 72 PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFE 131
KC D+ ++R+VFD M ++DV+SW+ +I GY + G Y++ ++
Sbjct: 173 ----------------KCYDLDLSRKVFDRMTKRDVVSWNSMISGYSQGGLYEDCKTLYR 216
Query: 132 EM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
EM SG +PN VT+VSVL AC L G +H +++DN++ + + + +L+ +YAKC
Sbjct: 217 EMVDFSGFRPNGVTVVSVLQACGQTQDLAFGMEVHKFIVDNQVEIDISVCNALIGLYAKC 276
Query: 191 GAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF----------------- 233
G++ A +F M D + ++I G HG V +SL+LF
Sbjct: 277 GSLDYARELFDE--MSEKDEVTYGAIISGLMLHGYVDQSLELFRGMKTQILSTWNAVITG 334
Query: 234 --------------SEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPK 279
EM +G +P+ +T ++LS A+ +K K G
Sbjct: 335 LVQNNRHEGVLDLVREMQALGFRPNAVTLSSVLSTIAYFSSLKGGKEIHSYAIKIGYHRN 394
Query: 280 SEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
++D+ A++G + A + Q + + A+++ HG +LA
Sbjct: 395 IYVATAIIDMYAKSGYLRGAQRVFDQSK-DRSLVIWTAIISAYAVHGDANLA 445
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 128/273 (46%), Gaps = 14/273 (5%)
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
+AR + + +N ++ + ++ Y+K ++ AR VFD +P ++ S++ ++ Y
Sbjct: 47 HARLILFSVTPENYLA-SKLVALYSKTNHLAFARYVFDQIPHKNTFSYNAMLISYSLHNR 105
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGA-----LDKGRMMHHYVIDNELPLTL 177
+ +AL +F + S N V +S+ C L + + G+ +H +V+ +
Sbjct: 106 HGDALDLFSSLASS----NLVNNISITCLLKSLSSFTLSDVKLGKEVHGFVLRTGFDADV 161
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM- 236
+ +L+ Y+KC + + VF M DV WNSMI G++ GL ++ L+ EM
Sbjct: 162 FVENALITYYSKCYDLDLSRKVFDR--MTKRDVVSWNSMISGYSQGGLYEDCKTLYREMV 219
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQV 296
G +P+ +T +++L AC + + N + ++ + A+ G +
Sbjct: 220 DFSGFRPNGVTVVSVLQACGQTQDLAFGMEVHKFIVDNQVEIDISVCNALIGLYAKCGSL 279
Query: 297 AEAYQFLCQIPIQPTASMLGALLNGCMNHGKLD 329
A + ++ + + GA+++G M HG +D
Sbjct: 280 DYARELFDEMSEKDEVTY-GAIISGLMLHGYVD 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 31/161 (19%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M +G P+ +T + A + G IH Y K GY + +V+ ++I MY+
Sbjct: 351 MQALGFRPNAVTLSSVLSTIAYFSSLKGGKEIHSYAIKIGYHRNIYVATAIIDMYAKSGY 410
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A++VFD ++LV W +++ YA GD ++
Sbjct: 411 LRGAQRVFDQSKDRSLVIWTAIISAYAVHGDANL-------------------------- 444
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
AL +F EM G +P+ VT +VL ACAH G +DK
Sbjct: 445 -----ALGLFHEMLKQGIQPDPVTFTAVLAACAHCGMVDKA 480
>29628.m000759 pentatricopeptide repeat-containing protein, putative
Length = 676
Score = 251 bits (641), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 145/444 (32%), Positives = 235/444 (52%), Gaps = 39/444 (8%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRF---VSNSLIHMYSS--FRD 60
+ P+ TF LA A A L LG +H + G ++D + +S LI MYSS F D
Sbjct: 228 ITPNIETFISLAYACAGLGFHRLGKQLHARLITEGLDNDDYDGRLSKGLICMYSSIGFMD 287
Query: 61 ------------------------------IPNARKVFDGIPVKNLVSWNSMLDGYAKCG 90
+ A+ +FD +PV++ ++W SM+DGY G
Sbjct: 288 YAHYIFNKNSNYYVVQSCNYMINGYIRIGLLDKAQNLFDTMPVRDKITWTSMIDGYLVIG 347
Query: 91 DISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLC 150
++S A +F MPE+D ++W+ +I G+VR + EA +F EM G +P T +
Sbjct: 348 NVSEACSLFLYMPEKDAVAWTTMISGHVRNELFAEATYLFSEMLTQGVRPLSSTYAILFG 407
Query: 151 ACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDV 210
A + +LD+GR +H + L+L SL+ MYAKCG I+ A +F M D+
Sbjct: 408 AAGAVASLDQGRQLHAMLTKTLSDNDLILENSLISMYAKCGEIRNAYRIFSQ--MISHDL 465
Query: 211 FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDC 270
WNSMI GF+ HGL E+L++F M G P+ +T+L +LSAC+H GL+ + W F+
Sbjct: 466 ISWNSMIMGFSHHGLANEALEVFEAMVDSGTHPNSVTFLGVLSACSHAGLINQGWEIFNA 525
Query: 271 LGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGC-MNHGKL 328
+ + P EHY CMV+++ RAG++ EA + + +P++ ++ GALL C +
Sbjct: 526 MSDVFAVQPGLEHYICMVNLLGRAGKLKEAEELILGLPLERNHAIWGALLGVCSFSEKNA 585
Query: 329 DLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEM 388
D+A+ +++EL+P +V L N+YA + + +R+ M GVKK PG S++ +
Sbjct: 586 DIAKRAATRILELDPLNAPAHVLLCNIYAASGQHIEEHKLRKEMGLKGVKKVPGCSWIVL 645
Query: 389 HGALHRFVAHDKSHPSSEQIYMML 412
+G +H F++ DK ++ + +L
Sbjct: 646 NGRVHVFLSGDKPRLQAKDMLSLL 669
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 119/240 (49%), Gaps = 34/240 (14%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
SL+ YS + AR +FD +P +N VS+N++L G +CG +S A ++F+ MPE++V+
Sbjct: 14 TSLLSKYSRSGFVDEARALFDIMPERNAVSYNALLSGLLQCGRLSEAMKLFEEMPERNVV 73
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMH--- 165
SW+ ++ G G EA ++FEEM P N V+ +++ G L+ RM+
Sbjct: 74 SWTSMLCGLADAGKICEAKSLFEEM----PDRNVVSWNAMIVGLIRNGDLEAARMVFDES 129
Query: 166 ------------------------HYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR 201
+ D ++ TS+V Y + G ++E H+FR
Sbjct: 130 PVKNAASWNGMIAGYAENGRMEEARALFDEMEDRNVITWTSMVSGYCRAGEVEEGYHLFR 189
Query: 202 SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI-VGVKPDEITYLNLLSACAHGGL 260
+ M ++ W +MIGGF +G +++L LF EM + P+ T+++L ACA G
Sbjct: 190 T--MPKRNIVSWTAMIGGFTWNGFYEDALLLFLEMKRGADITPNIETFISLAYACAGLGF 247
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 131/288 (45%), Gaps = 43/288 (14%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
N +I Y+ + AR +FD + +N+++W SM+ GY + G++ +F MP+++++
Sbjct: 138 NGMIAGYAENGRMEEARALFDEMEDRNVITWTSMVSGYCRAGEVEEGYHLFRTMPKRNIV 197
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHY 167
SW+ +I G+ G Y++AL +F EM R + PN T +S+ ACA LG G+ +H
Sbjct: 198 SWTAMIGGFTWNGFYEDALLLFLEMKRGADITPNIETFISLAYACAGLGFHRLGKQLHAR 257
Query: 168 VI----DNELPLTLVLRTSLVDMYAKCGAIQEALHVF--------------------RSG 203
+I DN+ L L+ MY+ G + A ++F R G
Sbjct: 258 LITEGLDND-DYDGRLSKGLICMYSSIGFMDYAHYIFNKNSNYYVVQSCNYMINGYIRIG 316
Query: 204 LMKPS----------DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
L+ + D W SMI G+ G V E+ LF M + D + + ++S
Sbjct: 317 LLDKAQNLFDTMPVRDKITWTSMIDGYLVIGNVSEACSLFLYMP----EKDAVAWTTMIS 372
Query: 254 ACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQ 301
L EA Y F + G+ P S YA + AG VA Q
Sbjct: 373 GHVRNELFAEATYLFSEMLTQGVRPLSSTYAIL---FGAAGAVASLDQ 417
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 130/273 (47%), Gaps = 24/273 (8%)
Query: 72 PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFE 131
P+ +V W S+L Y++ G + AR +FD+MPE++ +S++ L+ G ++ G EA+ +FE
Sbjct: 6 PLSRIVYWTSLLSKYSRSGFVDEARALFDIMPERNAVSYNALLSGLLQCGRLSEAMKLFE 65
Query: 132 EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELP-LTLVLRTSLVDMYAKC 190
EM P+ N V+ S+LC A D G++ + E+P +V +++ +
Sbjct: 66 EM----PERNVVSWTSMLCGLA-----DAGKICEAKSLFEEMPDRNVVSWNAMIVGLIRN 116
Query: 191 GAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLN 250
G ++ A VF +K + WN MI G+A +G ++E+ LF EM V IT+ +
Sbjct: 117 GDLEAARMVFDESPVK--NAASWNGMIAGYAENGRMEEARALFDEMEDRNV----ITWTS 170
Query: 251 LLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP--- 307
++S G V+E ++ F + K + + M+ G +A ++
Sbjct: 171 MVSGYCRAGEVEEGYHLFRTMPKRNIVS----WTAMIGGFTWNGFYEDALLLFLEMKRGA 226
Query: 308 -IQPTASMLGALLNGCMNHGKLDLAETVGRKLI 339
I P +L C G L + + +LI
Sbjct: 227 DITPNIETFISLAYACAGLGFHRLGKQLHARLI 259
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 43/224 (19%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML GV P T+ L A+ + + G +H +TK ++D + NSLI MY+ +
Sbjct: 390 MLTQGVRPLSSTYAILFGAAGAVASLDQGRQLHAMLTKTLSDNDLILENSLISMYAKCGE 449
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I NA ++F + +L+SWNSM I G+
Sbjct: 450 IRNAYRIFSQMISHDLISWNSM-------------------------------IMGFSHH 478
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +EAL VFE M SG PN VT + VL AC+H G +++G + I N + ++
Sbjct: 479 GLANEALEVFEAMVDSGTHPNSVTFLGVLSACSHAGLINQG-----WEIFNAMSDVFAVQ 533
Query: 181 TSL------VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIG 218
L V++ + G ++EA + GL + IW +++G
Sbjct: 534 PGLEHYICMVNLLGRAGKLKEAEELIL-GLPLERNHAIWGALLG 576
>29333.m001091 transferase, transferring glycosyl groups, putative
Length = 810
Score = 248 bits (634), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 182/272 (66%), Gaps = 2/272 (0%)
Query: 3 RVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIP 62
R+G+FPD+LT+PFL KA L ++G+ HG++ + G+E+D +V NSL++MYS+ DI
Sbjct: 532 RLGIFPDNLTYPFLVKACTQLGSIDMGMQAHGHVVRHGFENDVYVQNSLVNMYSNLGDIR 591
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
A +F + ++VSW SM+ GY K GD+ AR++FD MPE+++++WS +I GY +
Sbjct: 592 AASYIFQTMSQLDVVSWTSMIAGYNKSGDVESARKLFDKMPEKNLVTWSTMISGYAKNNC 651
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTS 182
+++A+ ++ ++ G + NE MVSV+ +CAHLGAL+ G H YV+ N++ + L+L T+
Sbjct: 652 FNKAIELYNVLQSEGVQANETVMVSVISSCAHLGALELGEKAHDYVVRNKITVNLILGTA 711
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
LVDMYA+CG+I +A+ VF + D W ++I GFA HG +++L FSEM G+
Sbjct: 712 LVDMYARCGSIDKAVQVFDE--LGEKDALSWTALIAGFAMHGHAEKALQYFSEMIRTGLT 769
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCLGKN 274
P +IT+ +LSAC+H GLV+ F+ + ++
Sbjct: 770 PRDITFTAVLSACSHRGLVERGMKIFETMKRD 801
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 105/221 (47%), Gaps = 30/221 (13%)
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
P+ +T ++ AC LG++D G H +V+ + + ++ SLV+MY+ G I+ A ++
Sbjct: 537 PDNLTYPFLVKACTQLGSIDMGMQAHGHVVRHGFENDVYVQNSLVNMYSNLGDIRAASYI 596
Query: 200 FRS--------------GLMKPSDV---------------FIWNSMIGGFACHGLVKESL 230
F++ G K DV W++MI G+A + +++
Sbjct: 597 FQTMSQLDVVSWTSMIAGYNKSGDVESARKLFDKMPEKNLVTWSTMISGYAKNNCFNKAI 656
Query: 231 DLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVM 290
+L++ + GV+ +E ++++S+CAH G ++ D + +N +T +VD+
Sbjct: 657 ELYNVLQSEGVQANETVMVSVISSCAHLGALELGEKAHDYVVRNKITVNLILGTALVDMY 716
Query: 291 ARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
AR G + +A Q ++ + A AL+ G HG + A
Sbjct: 717 ARCGSIDKAVQVFDELG-EKDALSWTALIAGFAMHGHAEKA 756
>29869.m001155 pentatricopeptide repeat-containing protein, putative
Length = 484
Score = 247 bits (630), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 129/356 (36%), Positives = 209/356 (58%), Gaps = 7/356 (1%)
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
RK+F + +LV +++D Y KCG++ +A++VF + E++++SW+ +I YV+ G
Sbjct: 39 RKMF----LPHLVLETALVDMYGKCGELELAKRVFSQIDEKNLVSWNTMIAAYVQNGLNM 94
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
EAL +F + PKP+ VT+ S+L A A L ++ + + +H Y+I EL ++ ++V
Sbjct: 95 EALELFNCLWNEPPKPDAVTIASILPAYAELASVSECKQIHSYIIKIELSSHTIISNAIV 154
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
MYAKCG ++ A +F L K +V WN+MI + HG S+ LFSEM G+KP+
Sbjct: 155 YMYAKCGDLKTARRIFDGMLCK--NVVSWNTMIMAYGIHGFGTMSIQLFSEMRENGIKPN 212
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFL 303
E T+++LLS+C+ GLV E W FF+ + + + EH+ CMVD++ R G + A QF+
Sbjct: 213 ESTFVSLLSSCSITGLVDEGWEFFNSMKSDYNIDHGIEHFGCMVDLLGRTGNLDAAMQFI 272
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWD 363
++P+ PTA + G+LL N + LAE + + LE G YV LSN+YA RW+
Sbjct: 273 EELPLVPTARIWGSLLTASRNKNNIALAELAAKHIFSLEHDNTGCYVLLSNMYAEAGRWE 332
Query: 364 KARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
++ M++ G+ K+ VE +G H+F+ DKSH IY +L I+ ++
Sbjct: 333 DVEQIKTLMKKKGIVKTVSCCMVETNGKSHKFINQDKSHSQINMIYDVLDIIMKKI 388
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 124/292 (42%), Gaps = 46/292 (15%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD +T + A A L IH YI K S +SN++++MY+ D+ AR++
Sbjct: 110 PDAVTIASILPAYAELASVSECKQIHSYIIKIELSSHTIISNAIVYMYAKCGDLKTARRI 169
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
FDG+ KN+VSWN+M+ Y G +M+ Q
Sbjct: 170 FDGMLCKNVVSWNTMIMAYGIHGFGTMSIQ------------------------------ 199
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-----RMMHHYVIDNELPLTLVLRTS 182
+F EMR +G KPNE T VS+L +C+ G +D+G M Y ID+ +
Sbjct: 200 -LFSEMRENGIKPNESTFVSLLSSCSITGLVDEGWEFFNSMKSDYNIDHGIEHF----GC 254
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
+VD+ + G + A+ + P+ IW S++ A +L + HI ++
Sbjct: 255 MVDLLGRTGNLDAAMQFIEELPLVPT-ARIWGSLLT--ASRNKNNIALAELAAKHIFSLE 311
Query: 243 PDEI-TYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARA 293
D Y+ L + A G ++ + K G+ CMV+ ++
Sbjct: 312 HDNTGCYVLLSNMYAEAGRWEDVEQIKTLMKKKGIVKTVS--CCMVETNGKS 361
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 2/124 (1%)
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
P+ +TM+++L +C+ GAL G+ +H Y I LVL T+LVDMY KCG ++ A V
Sbjct: 9 PDVITMINLLPSCSQSGALSNGKCIHGYAIRKMFLPHLVLETALVDMYGKCGELELAKRV 68
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F + ++ WN+MI + +GL E+L+LF+ + KPD +T ++L A A
Sbjct: 69 FSQ--IDEKNLVSWNTMIAAYVQNGLNMEALELFNCLWNEPPKPDAVTIASILPAYAELA 126
Query: 260 LVKE 263
V E
Sbjct: 127 SVSE 130
>29785.m000950 pentatricopeptide repeat-containing protein, putative
Length = 488
Score = 245 bits (625), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 136/382 (35%), Positives = 212/382 (55%), Gaps = 35/382 (9%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD + P + +A A +LG ++HG K G FV ++L+ MY +F
Sbjct: 135 PDDFSLPLVLRACAGSGLGKLGSSVHGLCVKMGLAVSLFVGSALVFMYVTF--------- 185
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
G++S AR VFD M ++D + W+ L+ GY + G+ L
Sbjct: 186 ----------------------GNVSNARVVFDEMAKRDSVLWTALLSGYAQNGEPKLGL 223
Query: 128 AVFEEM--RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
VF EM + K + V MVS+L C LG+L G+ +H + + N L L L L ++V
Sbjct: 224 QVFREMVDNSTRVKLDWVVMVSLLLVCGQLGSLKHGKSVHGWCVRNCLRLELSLGNAIVH 283
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MY KCG + A F M DVF W+S+I G+ G V +L LF +MH+ G+KP++
Sbjct: 284 MYIKCGMLAYAHRFFDK--MPERDVFSWSSLILGYGLSGNVSVALCLFDQMHMRGIKPND 341
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQ 305
+T+L +LSAC HGGLV++A +F + G+ + HYA +VD +ARAG+ EA +F+
Sbjct: 342 VTFLGILSACGHGGLVEQARSYFKMMQNYGLVAELRHYATIVDCLARAGRFEEAEKFISD 401
Query: 306 IPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKA 365
IP++P ++LGA+L GC H +++ E + ++LI L+P + G YV L+N+YA R+ +A
Sbjct: 402 IPMEPDEAVLGAILAGCRVHNNVEVGERIAKRLIRLKPEKAGYYVLLANMYAGVGRFHEA 461
Query: 366 RSMREAMERMGVKKSPGYSFVE 387
+R++M+ + K PG S +E
Sbjct: 462 EMVRDSMQEKNMSKVPGCSLLE 483
>30131.m006928 pentatricopeptide repeat-containing protein, putative
Length = 480
Score = 245 bits (625), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 120/322 (37%), Positives = 196/322 (60%), Gaps = 7/322 (2%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKREL--GLAIHGYITKAGYESDRFVSNSLIHMYSSF 58
M+ G PD TFPF+ KA CL L G +HG+ K G+ D F+SN+L+ +Y
Sbjct: 121 MICEGFSPDKFTFPFVIKA--CLDHSALDKGKEVHGFAIKTGFWKDTFLSNTLMDLYFKC 178
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
D+ ARK+FD + V+++VSW + + G CG++ AR FD MP ++V+SW+ +I+GYV
Sbjct: 179 GDLDYARKLFDKMAVRSVVSWTTFVAGLVACGELDTARAAFDEMPMRNVVSWTAMINGYV 238
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
+ EA +F+ M+++ +PN T+V +L AC LG+L+ GR +H Y ++N + +
Sbjct: 239 KNQRPQEAFELFQRMQLANVRPNGFTLVGLLRACTELGSLELGRRIHEYALENGFKVGVF 298
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
L T+L+DMY+KCG+I++A VF M+ + WNSMI HG KE+L LF++M
Sbjct: 299 LGTALIDMYSKCGSIEDAKKVFEE--MQKKSLATWNSMITSLGVHGFGKEALALFAQMEE 356
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVA 297
V+PD IT++ +L AC + V+ + +F + ++ G+TP EHY CM+++ RA +
Sbjct: 357 ANVRPDAITFVGVLFACVNTNNVEAGYRYFKYMTEHYGITPMLEHYTCMIELYTRAAMLN 416
Query: 298 EAYQFLCQIPIQPTASMLGALL 319
E + + +P++ ++ AL+
Sbjct: 417 EVSELVNSMPMKLNSNPAAALV 438
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 116/272 (42%), Gaps = 34/272 (12%)
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
+ A +FD + +W+ +I Y G+ +AL ++ M G P++ T V+ A
Sbjct: 80 VDYATLIFDQIQNPHTFTWNFMIRAYNYNGNSQQALLLYNLMICEGFSPDKFTFPFVIKA 139
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR---------- 201
C ALDKG+ +H + I L +L+D+Y KCG + A +F
Sbjct: 140 CLDHSALDKGKEVHGFAIKTGFWKDTFLSNTLMDLYFKCGDLDYARKLFDKMAVRSVVSW 199
Query: 202 ----SGL---------------MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
+GL M +V W +MI G+ + +E+ +LF M + V+
Sbjct: 200 TTFVAGLVACGELDTARAAFDEMPMRNVVSWTAMINGYVKNQRPQEAFELFQRMQLANVR 259
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQF 302
P+ T + LL AC G ++ + +NG ++D+ ++ G + +A +
Sbjct: 260 PNGFTLVGLLRACTELGSLELGRRIHEYALENGFKVGVFLGTALIDMYSKCGSIEDAKKV 319
Query: 303 LCQIPIQPTA---SMLGALLNGCMNHGKLDLA 331
++ + A SM+ +L G GK LA
Sbjct: 320 FEEMQKKSLATWNSMITSL--GVHGFGKEALA 349
>29676.m001663 pentatricopeptide repeat-containing protein, putative
Length = 704
Score = 244 bits (624), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 132/397 (33%), Positives = 217/397 (54%), Gaps = 34/397 (8%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD TF + A+ + G +H + KAG + F+ N+L+ MY FR+
Sbjct: 311 PDEYTFTAIISATGEFRATDYGQPLHAQVIKAGLQWSVFIGNALLSMY--FRN------- 361
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
D+ AR VF LM E+DV+ W+ +I G+ R GD + A+
Sbjct: 362 ----------------------SDVEAARGVFSLMEEKDVVLWTEMIMGHCRLGDGESAI 399
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+F +MR G K + + L CA L L +G+M+H + + + SLVDMY
Sbjct: 400 KLFCKMRQEGHKSDSFALSGALSVCADLAILKQGQMLHTQAVKTGCEAEISVCGSLVDMY 459
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
AK G +Q A +F S + P D+ WNSMIGG++ HG+ +E++ LF+E+ G+ PD++T
Sbjct: 460 AKNGNLQAAQLIF-SQVCNP-DLKCWNSMIGGYSHHGMAEEAVMLFAEVLECGLTPDQVT 517
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
+L+LLSAC H GLV++ + +D + KNG+TP +HY+CMV +++RAG + EA + + +
Sbjct: 518 FLSLLSACNHSGLVEKGKFLWDYMKKNGITPGPKHYSCMVSLLSRAGLLDEAEELITEST 577
Query: 308 I-QPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKAR 366
+ + LL+ C+N L + ++++ L+P Y+ LSN+YA+ RWD
Sbjct: 578 CSEEHLKLWRTLLSSCVNRRNLTVGARAAKQVLRLDPEDSATYILLSNLYAVTGRWDGVA 637
Query: 367 SMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHP 403
+R+ + + ++K PG S++E +H F + D+S+P
Sbjct: 638 ELRKKIRGLMLEKDPGVSWIEAKNDIHVFSSDDQSNP 674
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 119/248 (47%), Gaps = 34/248 (13%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P+ TF L + L LG +HG + + GY +D V L+ MYS
Sbjct: 108 PNGATFTSLLQVCCLLEDWFLGSTLHGQVLQFGYVNDICVQTMLLGMYSD---------- 157
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
CGD+ A +VF E+D + W+ +I GY++ E+L
Sbjct: 158 ---------------------CGDLESACKVFGYAVEKDDVFWNSMISGYLKNDRIKESL 196
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
++F EM SG + T L AC+ LG +GR++H VI + + L+ +L+DMY
Sbjct: 197 SLFGEMVRSGTIFTQFTCSMALNACSKLGYYSQGRIIHAQVIVSNILPDSALQNALLDMY 256
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSE-MHIVGVKPDEI 246
CG + AL +F S + PS + WNSMI FA + ++++ LF + + + KPDE
Sbjct: 257 YSCGDRRTALTLF-SRIQIPS-LISWNSMISWFAKNEEGEKAMGLFVKLLGMSTCKPDEY 314
Query: 247 TYLNLLSA 254
T+ ++SA
Sbjct: 315 TFTAIISA 322
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 119/284 (41%), Gaps = 34/284 (11%)
Query: 26 RELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDG 85
R+L I Y +++N+LI MY+ +A+K+FD +P KN +S+N+
Sbjct: 24 RQLHALILATTASTSYAQSPYLNNNLIAMYAHCGSRSDAQKLFDRMPRKNAISYNA---- 79
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE-ALAVFEEMRVSGPKPNEVT 144
LI Y R Y+ + +F +M + +PN T
Sbjct: 80 ---------------------------LIAAYCRDSSYETLSFKLFSDMGIQRLRPNGAT 112
Query: 145 MVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL 204
S+L C L G +H V+ + ++T L+ MY+ CG ++ A VF +
Sbjct: 113 FTSLLQVCCLLEDWFLGSTLHGQVLQFGYVNDICVQTMLLGMYSDCGDLESACKVFGYAV 172
Query: 205 MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEA 264
K DVF WNSMI G+ + +KESL LF EM G + T L+AC+ G +
Sbjct: 173 EK-DDVF-WNSMISGYLKNDRIKESLSLFGEMVRSGTIFTQFTCSMALNACSKLGYYSQG 230
Query: 265 WYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPI 308
+ + + P S ++D+ G A +I I
Sbjct: 231 RIIHAQVIVSNILPDSALQNALLDMYYSCGDRRTALTLFSRIQI 274
>29883.m001962 pentatricopeptide repeat-containing protein, putative
Length = 835
Score = 244 bits (623), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 125/360 (34%), Positives = 204/360 (56%), Gaps = 3/360 (0%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N+++D Y +CG I A ++F+ + +DV+SW+ +I YV G ++AL VF M+ +G +
Sbjct: 400 NTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLE 459
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
P+ VT+VS+L A L L KG+ +H ++I L + +LVDMYA+CG++++A +
Sbjct: 460 PDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKI 519
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F K ++ +W +MI + HG + +++LF M + PD IT+L LL AC+H G
Sbjct: 520 FTC--TKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSG 577
Query: 260 LVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGAL 318
LV E F + + + + P EHY C+VD++ R + EAYQ + + +PT + AL
Sbjct: 578 LVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCAL 637
Query: 319 LNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVK 378
L C H ++ E KL+EL+ G YV +SNV+A RW +R M+ G+
Sbjct: 638 LGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLT 697
Query: 379 KSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHIVDYENQEYYFYDNEGK 438
K+PG S++E+ +H F++ DK HP ++IY L + ++K Y Q + N G+
Sbjct: 698 KNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQVTEKLKREGGYVAQTKFVLHNVGE 757
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 143/298 (47%), Gaps = 35/298 (11%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD ++ + AS L G IH Y K G++S+ V N+LI M
Sbjct: 259 PDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDM------------- 305
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
YAKC +S + FDLM +D++SW+ GY + Y +AL
Sbjct: 306 ------------------YAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQAL 347
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+ ++++ G + + S+L AC L L K + +H Y I L VL+ +++D+Y
Sbjct: 348 ELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLS-DPVLQNTIIDVY 406
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
+CG I A+ +F S ++ DV W SMI + +GL ++L++FS M G++PD +T
Sbjct: 407 GECGIIDYAVRIFES--IECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVT 464
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQ-FLC 304
+++LSA +K+ + + G + +VD+ AR G V +AY+ F C
Sbjct: 465 LVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTC 522
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 125/260 (48%), Gaps = 34/260 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M +GV D TFP L KA + G IHG K G +S FV NSL+ +Y+ D
Sbjct: 49 MRHLGVSFDSYTFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCND 108
Query: 61 IPNARKVFDGIPVKN-LVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
I ARK+FD + V+N +VSWNS++ Y+ G +
Sbjct: 109 INGARKLFDRMYVRNDVVSWNSIISAYSGNGMCT-------------------------- 142
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
EAL +F EM +G N T + L AC + G +H ++ + L + +
Sbjct: 143 -----EALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYV 197
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+LV MY + G + EA +F G ++ D+ WNSM+ GF +GL E+L+ F ++
Sbjct: 198 ANALVAMYVRFGKMPEAAVIF--GNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNA 255
Query: 240 GVKPDEITYLNLLSACAHGG 259
+KPD+++ ++++ A G
Sbjct: 256 DLKPDQVSIISIIVASGRLG 275
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 132/275 (48%), Gaps = 47/275 (17%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKR--ELGLAIHGYITKAGYESDRFVSNSLIHMYSSF 58
ML+ GV + T+ F A AC +LG+ IH I K+G D +V+N+L+ MY F
Sbjct: 151 MLKAGVVTN--TYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRF 208
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
+P A +F + K++V+WNSML G ++
Sbjct: 209 GKMPEAAVIFGNLEGKDIVTWNSMLTG-------------------------------FI 237
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
+ G Y EAL F +++ + KP++V+++S++ A LG L G+ +H Y I N ++
Sbjct: 238 QNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNIL 297
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+ +L+DMYAKC + F LM D+ W + G+A + ++L+L ++ +
Sbjct: 298 VGNTLIDMYAKCCCMSYGGRAFD--LMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQM 355
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK 273
G+ D ++L AC GL +CLGK
Sbjct: 356 EGMDVDATMIGSILLACR--GL--------NCLGK 380
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 1/214 (0%)
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
Y KCG + A +FD M E+ + +W+ ++ GYV G+ AL ++ EMR G + T
Sbjct: 2 YGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTF 61
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
+L AC + L G +H I + + SLV +YAKC I A +F +
Sbjct: 62 PVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYV 121
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
+ +DV WNS+I ++ +G+ E+L LFSEM GV + T+ L AC +K
Sbjct: 122 R-NDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180
Query: 266 YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
+ K+G +V + R G++ EA
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEA 214
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 101/224 (45%), Gaps = 33/224 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G+ PD++T + A L + G IHG+I + G+ + +SN+L+ MY+
Sbjct: 453 MKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGS 512
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +A K+F +NL+ W +M+ Y G A ++F M ++ ++
Sbjct: 513 VEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKII------------ 560
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR-MMHHYVIDNELPLTLVL 179
P+ +T +++L AC+H G +++G+ + + +L
Sbjct: 561 -------------------PDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEH 601
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
T LVD+ + ++EA + +S +P+ +W +++G H
Sbjct: 602 YTCLVDLLGRRNCLEEAYQIVKSMQNEPTPE-VWCALLGACRIH 644
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MY KCG++ +A +F M +F WN+M+GG+ +G +L+++ EM +GV D
Sbjct: 1 MYGKCGSVLDAEMIFDK--MSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDS 58
Query: 246 ITYLNLLSACA 256
T+ LL AC
Sbjct: 59 YTFPVLLKACG 69
>29761.m000423 pentatricopeptide repeat-containing protein, putative
Length = 752
Score = 241 bits (615), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 131/396 (33%), Positives = 211/396 (53%), Gaps = 35/396 (8%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGY 86
ELGL IHG++ K G D V+ +L+ D Y
Sbjct: 388 ELGLQIHGFVMKLGCACDVNVATALV-------------------------------DLY 416
Query: 87 AKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK-GDYDEALAVFEEMRVSGPKPNEVTM 145
AKC + AR VFD + + + S++ ++ G++ GD ++ + +F ++R++G KP+ VT
Sbjct: 417 AKCEKLQSARIVFDHLSNKGIASFNAILAGFLESSGDEEDPMILFNQLRLAGVKPDMVTF 476
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
+L A+ +L+KGR H Y + + + S++ MYAKCG+I++A +F +M
Sbjct: 477 SRLLSLLANQASLEKGRSFHAYTVKTGFDTNISVANSVISMYAKCGSIEDAHQMFN--IM 534
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
D WN++I +A HG ++SL LF EM G PDE T L +L AC + GL K+
Sbjct: 535 NCRDSISWNALISAYALHGQAQKSLFLFEEMKRKGFDPDEFTILAILQACTYSGLWKDGI 594
Query: 266 YFFDCLG-KNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMN 324
F+ + K G+ P EHYACM D++ RAG ++EA + + P + + L+N C
Sbjct: 595 CLFNLMEPKYGIKPLLEHYACMADLLGRAGYLSEAMDIIKRSPFPKSTLLWRTLVNVCKL 654
Query: 325 HGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYS 384
HG L+ + + L++L P + G Y+ +SN+YA + D+A +R+ M + +K G S
Sbjct: 655 HGNLNFGKLASKHLLDLSPVEAGSYILVSNMYASEKMSDEAAKVRKVMNDLKFRKEAGSS 714
Query: 385 FVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
++E+ +H FVA DK HP S +IY L + +MK
Sbjct: 715 WIEIDNKVHHFVASDKDHPESREIYTRLELLTDEMK 750
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 109/243 (44%), Gaps = 33/243 (13%)
Query: 13 FPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIP 72
+P L K S LG A+H Y+ KAG + D F N+++++Y F +
Sbjct: 70 WPELIKISIGSRDFLLGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRL----------- 118
Query: 73 VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEE 132
+A++VFD M ++ ++W+ LI GY+ D+ A ++ +
Sbjct: 119 --------------------DLAQKVFDRMRTRNTITWTSLIKGYLEDNDFQSAFSIAGD 158
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
M G NE T +L AC+ G +H +VI + + + TSL+ MY K G
Sbjct: 159 MHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSGFDENVFVGTSLIAMYTKSGF 218
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
A VF S M D+ N MI + G +++++F + G +P + T+ N++
Sbjct: 219 FDVAEKVFDS--MGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLNDGFEPTDYTFTNII 276
Query: 253 SAC 255
S C
Sbjct: 277 STC 279
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 152/343 (44%), Gaps = 40/343 (11%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+L G P TF + L E G + G K G+ S+ V N++I MY +
Sbjct: 260 LLNDGFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGN--- 316
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
G+P + A ++F M E++++SW+ LI GY R
Sbjct: 317 --------SGMPKE--------------------AERMFSSMSEKNLISWTALISGYSRS 348
Query: 121 GDYDEALAVFEEMRVS-GPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
G +A+ F + G + + ++L C+ L+ G +H +V+ + +
Sbjct: 349 GYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDCNNLELGLQIHGFVMKLGCACDVNV 408
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF-ACHGLVKESLDLFSEMHI 238
T+LVD+YAKC +Q A VF + + +N+++ GF G ++ + LF+++ +
Sbjct: 409 ATALVDLYAKCEKLQSARIVFDH--LSNKGIASFNAILAGFLESSGDEEDPMILFNQLRL 466
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAE 298
GVKPD +T+ LLS A+ +++ F K G ++ + A+ G + +
Sbjct: 467 AGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGFDTNISVANSVISMYAKCGSIED 526
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGK----LDLAETVGRK 337
A+Q + + + S AL++ HG+ L L E + RK
Sbjct: 527 AHQMFNIMNCRDSISW-NALISAYALHGQAQKSLFLFEEMKRK 568
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 111/244 (45%), Gaps = 37/244 (15%)
Query: 4 VGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPN 63
GV PD +TF L A E G + H Y K G++++ V+NS+I M
Sbjct: 467 AGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGFDTNISVANSVISM--------- 517
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
YAKCG I A Q+F++M +D +SW+ LI Y G
Sbjct: 518 ----------------------YAKCGSIEDAHQMFNIMNCRDSISWNALISAYALHGQA 555
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR--T 181
++L +FEEM+ G P+E T++++L AC + G G + + +++ + + +L
Sbjct: 556 QKSLFLFEEMKRKGFDPDEFTILAILQACTYSGLWKDGICLFN-LMEPKYGIKPLLEHYA 614
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV 241
+ D+ + G + EA+ + + P +W +++ HG + + + H++ +
Sbjct: 615 CMADLLGRAGYLSEAMDIIKRSPF-PKSTLLWRTLVNVCKLHGNL--NFGKLASKHLLDL 671
Query: 242 KPDE 245
P E
Sbjct: 672 SPVE 675
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 110/253 (43%), Gaps = 39/253 (15%)
Query: 7 FPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMY--SSFRDIPNA 64
F +H T + +A + R LG IH ++ K+G++ + FV SLI MY S F D+ A
Sbjct: 166 FNEH-TCTVILQACSSPDDRILGEQIHCFVIKSGFDENVFVGTSLIAMYTKSGFFDV--A 222
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
KVFD + K++ N M+ Y R G+
Sbjct: 223 EKVFDSMGFKDIRCLNFMILEYG-------------------------------RAGNGG 251
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
+A+ VF+ + G +P + T +++ C +++G+ + + +++
Sbjct: 252 KAIEVFKNLLNDGFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAII 311
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI-VGVKP 243
MY G +EA +F S M ++ W ++I G++ G K+++D F +H +G+
Sbjct: 312 TMYGNSGMPKEAERMFSS--MSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINF 369
Query: 244 DEITYLNLLSACA 256
D +L C+
Sbjct: 370 DSTLLTAILDCCS 382
>30075.m001161 pentatricopeptide repeat-containing protein, putative
Length = 569
Score = 241 bits (615), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 130/389 (33%), Positives = 226/389 (58%), Gaps = 7/389 (1%)
Query: 1 MLRVGVFPDHLTFPFLAKASA---CLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSS 57
++ GV D +T L A A C E G A+H K G S VSN+L++MY+
Sbjct: 177 LISEGVGADKITLVILFSAFAQAQCDESLEYGTAVHSCAIKMGLVSMLNVSNALLNMYTK 236
Query: 58 FRDIPNARKVFDGI-PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDG 116
+R + A +VFD + K+ VS +++GY + G I +A +F + ++D++ W+ ++ G
Sbjct: 237 YRQMDAASRVFDEMGSKKDAVSHAILINGYVEKGLIDLASDIFYQIFDKDLVLWNVMLHG 296
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
Y++ +AL +F++M G P+E TMV +L ACA L L GR++H ++ N++
Sbjct: 297 YIKAKRPIDALELFKKMDNEGLIPDENTMVGILAACASLSDLQYGRVVHMFINRNDIKQD 356
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
+ ++T+L+DMY KCG+ +EAL F M+ DVF W ++I G A +G +L+LF +M
Sbjct: 357 IFVKTALIDMYFKCGSPEEALVTFYK--MEYKDVFTWTAVIEGLANNGYGNVALNLFKQM 414
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQ 295
G++P+E T+++ L++C H GLVKE F + + + P+ EH+ C++DV++RAG
Sbjct: 415 EEQGIQPNEATFVSALTSCRHSGLVKEGCQMFRKMVEVYKLQPRFEHFGCLIDVLSRAGL 474
Query: 296 VAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNV 355
+A+AY+F+ + + + +L+ C+ + + D+ E ++ EL P ++ LSN
Sbjct: 475 LAQAYEFVKLLRPEERLAAYKIVLSACIKYLEFDVGEKAALEMAELSPQSCEMHILLSNF 534
Query: 356 YAIFRRWDKARSMREAMERMGVKKSPGYS 384
YA+ +W++ R M+R+ +K PG S
Sbjct: 535 YALAGQWERVAKTRRTMKRLNTRKEPGIS 563
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/446 (21%), Positives = 185/446 (41%), Gaps = 86/446 (19%)
Query: 7 FPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARK 66
+PD T+P L A + L +G +H ++ K G +SD +V N+L+H Y S + + AR
Sbjct: 81 YPDRYTYPLLLNACSRLSFASMGQLVHTHLIKIGLDSDIYVQNALLHFYGSIKQLNYARL 140
Query: 67 VFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEA 126
+FD + +++ SWN+ + + + V DLM
Sbjct: 141 LFDKMYERDITSWNTFMG-----ASYASSNSVIDLMD----------------------- 172
Query: 127 LAVFEEMRVSGPKPNEVTMVSVLCACAHLG---ALDKGRMMHHYVIDNELPLTLVLRTSL 183
+F+ + G +++T+V + A A +L+ G +H I L L + +L
Sbjct: 173 --LFKRLISEGVGADKITLVILFSAFAQAQCDESLEYGTAVHSCAIKMGLVSMLNVSNAL 230
Query: 184 VDMYAKCGAIQEALHVF--------------------RSGLMK-PSDVF---------IW 213
++MY K + A VF GL+ SD+F +W
Sbjct: 231 LNMYTKYRQMDAASRVFDEMGSKKDAVSHAILINGYVEKGLIDLASDIFYQIFDKDLVLW 290
Query: 214 NSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK 273
N M+ G+ ++L+LF +M G+ PDE T + +L+ACA ++ + +
Sbjct: 291 NVMLHGYIKAKRPIDALELFKKMDNEGLIPDENTMVGILAACASLSDLQYGRVVHMFINR 350
Query: 274 NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAET 333
N + ++D+ + G EA ++ + + A++ G N+G ++A
Sbjct: 351 NDIKQDIFVKTALIDMYFKCGSPEEALVTFYKMEYKDVFTW-TAVIEGLANNGYGNVALN 409
Query: 334 VGRKLIE--LEPHQ--------DGRYVGLSN-----------VYAIFRRWDKARSMREAM 372
+ +++ E ++P++ R+ GL VY + R++ + + +
Sbjct: 410 LFKQMEEQGIQPNEATFVSALTSCRHSGLVKEGCQMFRKMVEVYKLQPRFEHFGCLIDVL 469
Query: 373 ERMGVKKSPGYSFVEMHGALHRFVAH 398
R G+ + Y FV++ R A+
Sbjct: 470 SRAGL-LAQAYEFVKLLRPEERLAAY 494
>29900.m001587 pentatricopeptide repeat-containing protein, putative
Length = 530
Score = 239 bits (609), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 135/395 (34%), Positives = 214/395 (54%), Gaps = 9/395 (2%)
Query: 5 GVFPDHLTFPFLAKASAC----LLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
G PD T+ + KAS L LG +HG I K+ E D + +L+ Y
Sbjct: 138 GQRPDGFTYSMILKASTSGDNVTLSCNLGSVVHGQILKSEVEPDDVLYTALVDSYVKSGR 197
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ ARKVFD + KN++ SM+ GY G + A ++F+ E+DV+ ++ +I+GY +
Sbjct: 198 VGYARKVFDMMMEKNVICSTSMISGYMNRGSVEDAEEIFERTVEKDVVVFNAMIEGYSKS 257
Query: 121 GDYDE-ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
E AL V+ EM+ G +PN T SV+ AC+ L + G+ + ++ E +
Sbjct: 258 VQTAEKALEVYVEMQRYGFRPNLSTFASVIGACSVLAGFEIGQQVQGQLLKREFFTNVKT 317
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
++L+DMY+KCG I++A F M +VF W+SMI G+ +G E+L LF +M
Sbjct: 318 GSALIDMYSKCGRIEDARRAFEQ--MPEKNVFSWSSMIDGYGKNGRPDEALQLFHKMQDC 375
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAE 298
++P+ +T+L LSAC H GLV + F+ + + + P EHYACMVD++ RAG +
Sbjct: 376 CIEPNYVTFLGALSACGHAGLVSKGREIFESMEREYSLKPGMEHYACMVDLLGRAGSLNL 435
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPH-QDGRYVGLSNVYA 357
A++F+ +P +P++ + ALL+ C HG +++A +L +L + G YV LSN A
Sbjct: 436 AWEFVMGMPEKPSSDVWAALLSACNLHGNVEMASVAANELFKLNAEGRSGAYVALSNTLA 495
Query: 358 IFRRWDKARSMREAMERMGVKKSPGYSFVEMHGAL 392
+WD +RE M+ G+ K G S+V L
Sbjct: 496 AAGKWDGVTEVREIMKSRGILKDTGSSWVGTESVL 530
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 174/369 (47%), Gaps = 43/369 (11%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G IH +I K G+ + VS L+ +Y + AR++FD +P + L ++N ++ GY K
Sbjct: 61 GQKIHAHIVKTGFIPNTNVSIKLLILYLKCGCLKYARQMFDELPQRTLSAYNYLIGGYLK 120
Query: 89 CG----DISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY-----DEALAVFEEMRVSGPK 139
G +++ R++ D ++S ++ GD + V ++ S +
Sbjct: 121 LGLVQDSMNLVRRLVLEGQRPDGFTYSMILKAST-SGDNVTLSCNLGSVVHGQILKSEVE 179
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
P++V +++ + G + R V D + ++ TS++ Y G++++A +
Sbjct: 180 PDDVLYTALVDSYVKSGRVGYARK----VFDMMMEKNVICSTSMISGYMNRGSVEDAEEI 235
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKE-SLDLFSEMHIVGVKPDEITYLNLLSACA-- 256
F + K DV ++N+MI G++ E +L+++ EM G +P+ T+ +++ AC+
Sbjct: 236 FERTVEK--DVVVFNAMIEGYSKSVQTAEKALEVYVEMQRYGFRPNLSTFASVIGACSVL 293
Query: 257 ---------HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
G L+K FF + K G + ++D+ ++ G++ +A + Q+P
Sbjct: 294 AGFEIGQQVQGQLLKRE--FFTNV-KTG--------SALIDMYSKCGRIEDARRAFEQMP 342
Query: 308 IQPTASMLGALLNGCMNHGKLDLAETVGRKLIE--LEPHQDGRYVGLSNVYAIFRRWDKA 365
+ S ++++G +G+ D A + K+ + +EP+ ++G + K
Sbjct: 343 EKNVFS-WSSMIDGYGKNGRPDEALQLFHKMQDCCIEPNYV-TFLGALSACGHAGLVSKG 400
Query: 366 RSMREAMER 374
R + E+MER
Sbjct: 401 REIFESMER 409
>30174.m009061 pentatricopeptide repeat-containing protein, putative
Length = 319
Score = 237 bits (605), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 192/321 (59%), Gaps = 7/321 (2%)
Query: 71 IPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVF 130
+P +N ++WN+M+ GY++ G+I AR F+ MP +DV SWS +I Y+ G +D L +F
Sbjct: 1 MPERNTITWNTMITGYSRSGNIDKARAFFEEMPLRDVGSWSAMITAYINHGRWDRGLLLF 60
Query: 131 EEMRVSGP-KPNEVTMVSVLCACAHLG--ALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
EM + KP++VT+ +VL C H+G L G+ H +++ N L + + T LVDMY
Sbjct: 61 REMMTNSELKPDQVTVGTVLSGCTHMGFLGLLVGKSAHGFIMKNRWELNVEIGTVLVDMY 120
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
KCG ++ A+ VF LMK +V W ++I G A HG +E+L LF+ M ++P+E+T
Sbjct: 121 VKCGYLKNAIRVF--DLMKERNVMTWTALICGAAQHGYSEETLSLFNMMQEAKIRPNELT 178
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
+ +L+ CAH GLV+E +F + + G+ + +HY CMVD+ +AG + EAY + +
Sbjct: 179 FTGILNVCAHSGLVEEGKKYFRMIEEYGLERRIQHYGCMVDLFGKAGLLDEAYNVIKTMK 238
Query: 308 IQPTASMLGALLNGCMNHGKLDLAETVGRKLIE-LEPHQDGR-YVGLSNVYAIFRRWDKA 365
++ + G+ L+ C H K D+AE V ++++ ++P DG Y + ++Y +WD A
Sbjct: 239 VENNVVIWGSFLSACKEHKKFDMAERVIEQVLKVIKPENDGGIYTLVCDLYTSNEKWDDA 298
Query: 366 RSMREAMERMGVKKSPGYSFV 386
+R+ M V+K+ G SF+
Sbjct: 299 ERVRKLMLNQNVRKARGSSFI 319
>29648.m001935 pentatricopeptide repeat-containing protein, putative
Length = 681
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 130/380 (34%), Positives = 206/380 (54%), Gaps = 3/380 (0%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D T + A + + +HGY+ K G V+++ I YS R+ +A K+F
Sbjct: 304 DSSTITVILSACSSTGNAQYAKQMHGYVCKVGLIDSVIVASAFIDAYSKCRNPNDACKLF 363
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
+ + V NSM+ Y CG I A+ +F+ MP + ++SW+ +I G + EAL
Sbjct: 364 SELKAYDTVLLNSMITAYCNCGRIRDAKNIFETMPSKSLISWNSIIVGLAQNAYPLEALD 423
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
VF +M + + ++ SV+ ACA + +L+ G + I L + TSLVD Y
Sbjct: 424 VFGKMNKLDLRMDRFSLASVISACACISSLELGEQVFARAIITGLESDQAVSTSLVDFYC 483
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
KCG I+ +F S M +D WNSM+ G+A +G E+L LF+EM G++P +IT+
Sbjct: 484 KCGFIENGRKLFDS--MIKTDEVSWNSMLMGYATNGYGLETLTLFNEMKQAGLRPTDITF 541
Query: 249 LNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
+LSAC H GLV+E +F+ + + + P EHY+CMVD+ ARAG + EA + +P
Sbjct: 542 TGVLSACDHCGLVEEGRKWFNIMKYDYHIDPGIEHYSCMVDLFARAGCLKEALNLVEHMP 601
Query: 308 IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARS 367
+ SM ++L GC+ HG DL + V +++I+L P YV LS ++A W+ +
Sbjct: 602 FEADCSMWSSVLRGCVAHGDKDLGKKVAQQIIQLNPESSSAYVQLSGIFATSGDWESSAL 661
Query: 368 MREAMERMGVKKSPGYSFVE 387
+R+ M VKK PG+S+ +
Sbjct: 662 VRKIMTEKQVKKHPGFSWAD 681
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 161/328 (49%), Gaps = 39/328 (11%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
E + F N++I Y D + K+FD +P KN SWN ++ G+AK G++ +A+++F+
Sbjct: 70 ERNCFSWNTMIEGYMRVGDKERSLKLFDLMPQKNDYSWNVVISGFAKAGELDVAKKLFNE 129
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKP----NEVTMVSVLCACAHLGA 157
MP ++ ++W+ +I GY R G EA+ +F+E+ S P + + SV+ ACA LGA
Sbjct: 130 MPRRNGVAWNSMIHGYARNGFAREAVGLFKELN-SNPLEKSCGDTFVLASVIGACADLGA 188
Query: 158 LDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVF------ 211
++ G+ +H ++ +++ L VL +SL+++YAKCG + A +V + +M D F
Sbjct: 189 IEYGKQVHARILMDDVELDSVLISSLINLYAKCGHLDTANYVLK--MMDEVDDFSLSALI 246
Query: 212 -------------------------IWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
+WNS+I G+ + ++ L +EM V+ D
Sbjct: 247 MGYANCGRMSDAVRIFRTKSNPCFVVWNSLISGYVNNHEEMKAFALVNEMKNNRVQVDSS 306
Query: 247 TYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
T +LSAC+ G + A + K G+ + +D ++ +A + ++
Sbjct: 307 TITVILSACSSTGNAQYAKQMHGYVCKVGLIDSVIVASAFIDAYSKCRNPNDACKLFSEL 366
Query: 307 PIQPTASMLGALLNGCMNHGKLDLAETV 334
T +L +++ N G++ A+ +
Sbjct: 367 KAYDTV-LLNSMITAYCNCGRIRDAKNI 393
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 128/278 (46%), Gaps = 35/278 (12%)
Query: 12 TFPFLAKASAC--LLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFD 69
TF + AC L E G +H I E D + +SLI++Y+ + A V
Sbjct: 173 TFVLASVIGACADLGAIEYGKQVHARILMDDVELDSVLISSLINLYAKCGHLDTANYVLK 232
Query: 70 GIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAV 129
+ + S ++++ GYA CG +S A ++F + W+ LI GYV + +A A+
Sbjct: 233 MMDEVDDFSLSALIMGYANCGRMSDAVRIFRTKSNPCFVVWNSLISGYVNNHEEMKAFAL 292
Query: 130 FEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAK 189
EM+ + + + T+ +L AC+ G + MH YV L ++++ ++ +D Y+K
Sbjct: 293 VNEMKNNRVQVDSSTITVILSACSSTGNAQYAKQMHGYVCKVGLIDSVIVASAFIDAYSK 352
Query: 190 -------------------------------CGAIQEALHVFRSGLMKPSDVFIWNSMIG 218
CG I++A ++F + M + WNS+I
Sbjct: 353 CRNPNDACKLFSELKAYDTVLLNSMITAYCNCGRIRDAKNIFET--MPSKSLISWNSIIV 410
Query: 219 GFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
G A + E+LD+F +M+ + ++ D + +++SACA
Sbjct: 411 GLAQNAYPLEALDVFGKMNKLDLRMDRFSLASVISACA 448
>29822.m003454 pentatricopeptide repeat-containing protein, putative
Length = 428
Score = 235 bits (599), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 124/340 (36%), Positives = 199/340 (58%), Gaps = 8/340 (2%)
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
YAKC +S A ++FD + DV+ W+ L++GY+ EAL VF M V G +P+E +
Sbjct: 74 YAKCKIMSDAHKMFDEIHRPDVIQWNVLMNGYIESNLESEALRVFRFMFVKGVEPDEFCV 133
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
+ L ACA GAL +G+ +H YV L + + T+LVDMYAKCG I A+ VF M
Sbjct: 134 TTALAACAKSGALWQGKWIHEYVKKTTLGFDVFIGTALVDMYAKCGWINMAVQVFEE--M 191
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV-GVKPDEITYLNLLSACAHGGLVKEA 264
F W +MIGG+A HG +E++ MH G++PD + L +L+AC H GL +E
Sbjct: 192 PKRSAFSWAAMIGGYAIHGYAREAIHYLERMHAEDGLRPDGVVLLGVLTACTHAGLQEEG 251
Query: 265 WYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCM 323
+ D + + G+ P+ EHY+C+VD++ RAG+ EA + ++P++P AS+ GA+L+ C
Sbjct: 252 RFLLDNMKARYGIVPRHEHYSCVVDLLCRAGRWDEALALIKRMPMKPLASVWGAVLSSCR 311
Query: 324 NHGKLDLAETVGRKLIELE----PHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKK 379
H +LAE ++L++LE +D +V L N+Y R + A + + G+KK
Sbjct: 312 THKNAELAEFAVQELLQLENGNGNEEDAAFVQLWNIYLSTGRGEDASKIHRLIGERGLKK 371
Query: 380 SPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
+PG S +E++G ++ FV+ D S+ Q++ +L ++ +
Sbjct: 372 TPGCSMIEVNGMVNEFVSGDVSNKDVAQMHAILELLLPDL 411
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 81/150 (54%), Gaps = 11/150 (7%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVS-GP 138
+++D YAKCG I+MA QVF+ MP++ SW+ +I GY G EA+ E M G
Sbjct: 169 TALVDMYAKCGWINMAVQVFEEMPKRSAFSWAAMIGGYAIHGYAREAIHYLERMHAEDGL 228
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN-ELPLTLVLR----TSLVDMYAKCGAI 193
+P+ V ++ VL AC H G ++GR +++DN + +V R + +VD+ + G
Sbjct: 229 RPDGVVLLGVLTACTHAGLQEEGR----FLLDNMKARYGIVPRHEHYSCVVDLLCRAGRW 284
Query: 194 QEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
EAL + + MKP +W +++ H
Sbjct: 285 DEALALIKRMPMKPL-ASVWGAVLSSCRTH 313
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
++T++V +YAKC + +A +F + +P DV WN ++ G+ L E+L +F M +
Sbjct: 66 IQTAVVRLYAKCKIMSDAHKMFDE-IHRP-DVIQWNVLMNGYIESNLESEALRVFRFMFV 123
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAE 298
GV+PDE L+ACA G + + + + + K + +VD+ A+ G +
Sbjct: 124 KGVEPDEFCVTTALAACAKSGALWQGKWIHEYVKKTTLGFDVFIGTALVDMYAKCGWINM 183
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHG 326
A Q ++P + +A A++ G HG
Sbjct: 184 AVQVFEEMP-KRSAFSWAAMIGGYAIHG 210
>29869.m001143 pentatricopeptide repeat-containing protein, putative
Length = 662
Score = 234 bits (596), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 122/347 (35%), Positives = 201/347 (57%), Gaps = 3/347 (0%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
+ D F N++I Y D+ A +F +P + +SWN M+ GYA+ G + +A F+
Sbjct: 314 DRDSFSWNTMISGYVHVLDMEEASNLFHKMPSPDTLSWNLMISGYAQSGSLELAHDFFER 373
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
MP+++++SW+ +I GY + GDY A+ +F +M+V G K + T+ S+L + + L G
Sbjct: 374 MPQKNLVSWNSVIAGYEKNGDYIGAINLFIQMQVEGEKSDRHTLSSLLSVSSGIVDLQLG 433
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA 221
+H V +P + L +L+ MY++CGAI EA +F ++ +V WN+MIGG+A
Sbjct: 434 MQIHQLVSKTVIP-DVPLNNALITMYSRCGAIFEARTIFYEMKLQ-KEVISWNAMIGGYA 491
Query: 222 CHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKS 280
HG E+L+LF M V+P IT++++L+ACAH GLV+E F+ + + G+ P+
Sbjct: 492 SHGYATEALELFKLMRSFKVQPTYITFISVLNACAHAGLVEEGRRIFESMVSDYGVEPRV 551
Query: 281 EHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
EH+A +VD++ R GQ+ EA + + I+P ++ GALL H +++A L++
Sbjct: 552 EHFASLVDIVGRQGQLEEALDLINSMTIEPDKAVWGALLGASRVHNNVEMARVAAEALMK 611
Query: 341 LEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVE 387
LEP Y+ L N+Y +WD A +R MER +KK S+V+
Sbjct: 612 LEPDSSVPYILLYNMYVDVGQWDNAAEIRSMMERNNIKKEAAISWVD 658
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 124/270 (45%), Gaps = 48/270 (17%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
+S+ + SN I ++ I AR +FD + +N V+WNSM+ GY K G+++ AR++FD
Sbjct: 44 DSNLYSSNKKISHFTRTGRINEARALFDKLERRNTVTWNSMISGYVKRGEMTKARKLFDE 103
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
MPE+DV+SW+ +I GYV +C +++G
Sbjct: 104 MPERDVVSWNLIISGYV--------------------------------SCRGKRFIEEG 131
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA 221
R + D V +++ YAK G + EAL +F + M + WN+M+ GF
Sbjct: 132 RNL----FDKMPERCCVSWNTMISGYAKNGRMDEALGLFNT--MPEKNSVSWNAMVSGFL 185
Query: 222 CHGLVKESLDLFSEMHIVGVKPD-EITYLN-LLSACAHGGLVKEAWYFFDCLGKNGMTPK 279
+G V +++ F M P+ ++T L+ L+S + +A G NG + +
Sbjct: 186 QNGDVVRAIEFFKRM------PERDVTSLSALVSGLIQNSELDQAERILLDYGNNGGSKE 239
Query: 280 --SEHYACMVDVMARAGQVAEAYQFLCQIP 307
Y ++ + G+V EA +IP
Sbjct: 240 YLVHAYNTLIAGYGQRGRVDEAQNLFDKIP 269
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 35/203 (17%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPV-KNLVSWNSMLDG 85
+LG+ IH ++K D ++N+LI MYS I AR +F + + K ++SWN+M+ G
Sbjct: 431 QLGMQIHQLVSKTVI-PDVPLNNALITMYSRCGAIFEARTIFYEMKLQKEVISWNAMIGG 489
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
YA G + EAL +F+ MR +P +T
Sbjct: 490 YASHGYAT-------------------------------EALELFKLMRSFKVQPTYITF 518
Query: 146 VSVLCACAHLGALDKG-RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL 204
+SVL ACAH G +++G R+ V D + + SLVD+ + G ++EAL + S
Sbjct: 519 ISVLNACAHAGLVEEGRRIFESMVSDYGVEPRVEHFASLVDIVGRQGQLEEALDLINSMT 578
Query: 205 MKPSDVFIWNSMIGGFACHGLVK 227
++P D +W +++G H V+
Sbjct: 579 IEP-DKAVWGALLGASRVHNNVE 600
>48562.m000006 pentatricopeptide repeat-containing protein, putative
Length = 519
Score = 232 bits (591), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 116/325 (35%), Positives = 192/325 (59%), Gaps = 4/325 (1%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML + PD T + A A + LG IH YI + ++ V N+LI MY+
Sbjct: 195 MLEDSLKPDRFTLASILSACANIENLNLGKQIHSYIIRTEFDISGVVQNALISMYAKTGG 254
Query: 61 IPNARKVFD--GIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
+ A+ + + GI N++++ ++LDGY K G+I+ AR +FD + + DV++W+ +I GYV
Sbjct: 255 VEIAQSIVEQSGISDLNVIAFTALLDGYVKLGNITPARHIFDSLKDSDVVAWTAMIVGYV 314
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
+ G D+A+ +F M GP+PN T+ ++L +++ +L+ G+ +H I + L++
Sbjct: 315 QNGLNDDAMELFRIMAKEGPRPNSFTLAAMLSVSSNVASLNHGKQIHASAIRSGENLSVS 374
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+ +L+ MYAK G+I +A VF + + D W SMI HGL +ES++LF +M
Sbjct: 375 VGNALITMYAKAGSITDAQQVFNL-IQRNKDTVSWTSMIIALGQHGLGQESIELFEKMLA 433
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVA 297
+G+KPD ITY+ +LSAC H GLV++ +F+ + + + P HYACM+D+ RAG +
Sbjct: 434 LGIKPDHITYVGVLSACTHVGLVEQGRGYFNLMTSIHKIEPTLSHYACMIDLFGRAGLLQ 493
Query: 298 EAYQFLCQIPIQPTASMLGALLNGC 322
EA+ F+ +PI+P G+LL+ C
Sbjct: 494 EAFSFIENMPIEPDVIAWGSLLSSC 518
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 174/374 (46%), Gaps = 42/374 (11%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M++ V P T + + A L ++G IH ++ K G V+NSL++MY+ D
Sbjct: 63 MMKDKVLPTQFTVTNVFASCAALGALDIGKKIHSFVIKLGLSGCVPVANSLLNMYAKAGD 122
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
A+ VFD + ++++ SWN M+ + G +A F+ M E+DV++W+ +I GY +
Sbjct: 123 SVMAKIVFDRMRLRSISSWNIMISLHMHGGRADLALAQFEQMSERDVVTWNSMITGYSQH 182
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G EAL +F M KP+ T+ S+L ACA++ L+ G+ +H Y+I E ++ V++
Sbjct: 183 GFDKEALELFSRMLEDSLKPDRFTLASILSACANIENLNLGKQIHSYIIRTEFDISGVVQ 242
Query: 181 TSLVDMYAKCGAIQ---------------------------------EALHVFRSGLMKP 207
+L+ MYAK G ++ A H+F S +K
Sbjct: 243 NALISMYAKTGGVEIAQSIVEQSGISDLNVIAFTALLDGYVKLGNITPARHIFDS--LKD 300
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYF 267
SDV W +MI G+ +GL ++++LF M G +P+ T +LS ++ +
Sbjct: 301 SDVVAWTAMIVGYVQNGLNDDAMELFRIMAKEGPRPNSFTLAAMLSVSSNVASLNHGKQI 360
Query: 268 FDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
++G ++ + A+AG + +A Q I +++ HG
Sbjct: 361 HASAIRSGENLSVSVGNALITMYAKAGSITDAQQVFNLIQRNKDTVSWTSMIIALGQHG- 419
Query: 328 LDLAETVGRKLIEL 341
+G++ IEL
Sbjct: 420 ------LGQESIEL 427
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 117/216 (54%), Gaps = 29/216 (13%)
Query: 71 IPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVF 130
+PVK SWN++L GYAK G ++ A VFD +P++D +SW+ +I GY + G ++ A+ +F
Sbjct: 1 MPVKTTFSWNTILTGYAKLGTLAKAHSVFDEIPDRDSVSWTTMIVGYNQMGRFESAIKMF 60
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
M P + T+ +V +CA LGALD G+ +H +VI L + + SL++MYAK
Sbjct: 61 VAMMKDKVLPTQFTVTNVFASCAALGALDIGKKIHSFVIKLGLSGCVPVANSLLNMYAKA 120
Query: 191 G----------------------AIQEALHVFRSGL-------MKPSDVFIWNSMIGGFA 221
G I +H R+ L M DV WNSMI G++
Sbjct: 121 GDSVMAKIVFDRMRLRSISSWNIMISLHMHGGRADLALAQFEQMSERDVVTWNSMITGYS 180
Query: 222 CHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
HG KE+L+LFS M +KPD T ++LSACA+
Sbjct: 181 QHGFDKEALELFSRMLEDSLKPDRFTLASILSACAN 216
>29724.m000842 pentatricopeptide repeat-containing protein, putative
Length = 695
Score = 231 bits (590), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 137/426 (32%), Positives = 225/426 (52%), Gaps = 40/426 (9%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + G D +T L A++ L RE+G H Y+ + G +
Sbjct: 296 MQKQGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIK------------------ 337
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVF--DLMPEQDVLSWSCLIDGYV 118
FDG+ + ++D YAK G I ++++VF + + +D +W+ +I GY
Sbjct: 338 -------FDGMD-------SYLIDMYAKSGLIRISQRVFENNNIQNRDQATWNAVIAGYT 383
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
+ G ++A F M +PN VT+ S+L AC+ LG+++ G+ +H I L +
Sbjct: 384 QNGLVEQAFITFRLMLEQNLRPNAVTLASILPACSSLGSINLGKQLHGVSIRYSLDQNIF 443
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+RT+LVDMY+K GAI A VF + S + +MI G+ HG+ + +L LF M
Sbjct: 444 VRTALVDMYSKSGAINYAESVFTQSSERNS--VTYTTMILGYGQHGMGENALSLFHSMKK 501
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVA 297
G++PD IT++ +LSAC++ GLV E F+ + ++ + P + HY C+ D++ R G+V
Sbjct: 502 SGIQPDAITFVAVLSACSYAGLVDEGLRIFESMKRDFKIQPSTAHYCCVADMLGRVGRVI 561
Query: 298 EAYQFLCQIPIQP-TASMLGALLNGCMNHGKLDLAETVGRKLIELEP--HQDGRYVGLSN 354
EAY+F+ Q+ + + G+LL C HG ++L E V +L+E+ G V LSN
Sbjct: 562 EAYEFVKQLGEEGHVIEIWGSLLGACRLHGHIELGEEVSNRLLEMNSVDRLAGYQVLLSN 621
Query: 355 VYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGF 414
+YA W+ +R++M G++K G S+++ G L RFV+ DK H E+IY ML
Sbjct: 622 MYAEEANWETVDKLRKSMREKGLRKEVGCSWIDTGGLLVRFVSKDKDHTRCEEIYEMLER 681
Query: 415 IVSQMK 420
+ +M+
Sbjct: 682 LAMEME 687
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 108/183 (59%), Gaps = 1/183 (0%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N++L Y++C + + +VF+ MPE+DV+SW+ +I G+++ G +E L + EM+ G
Sbjct: 243 NAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGLMLVYEMQKQGFI 302
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
+ VT+ S+L A ++L + G+ H Y+I + + + + L+DMYAK G I+ + V
Sbjct: 303 ADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFD-GMDSYLIDMYAKSGLIRISQRV 361
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F + ++ D WN++I G+ +GLV+++ F M ++P+ +T ++L AC+ G
Sbjct: 362 FENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAVTLASILPACSSLG 421
Query: 260 LVK 262
+
Sbjct: 422 SIN 424
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 149/322 (46%), Gaps = 46/322 (14%)
Query: 56 SSFRDIPNARKVFDGIPVK-------NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
SS D NA V G+ +K +L +S + YA+ G + + R+VFD E+
Sbjct: 111 SSVGDFKNA-NVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAE 169
Query: 109 SWSCLIDGYVRKGDYDEALAVF-EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHY 167
W+ +I G+++ + E + +F + M+ ++VT +S L A + L L G+ MH +
Sbjct: 170 VWNTMIGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAF 229
Query: 168 VIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
+ N L++ + +++ MY++C ++Q + VF M DV WN+MI GF +GL +
Sbjct: 230 TMKNHTVLSVTVLNAILVMYSRCNSVQTSFEVFEK--MPEKDVVSWNTMISGFIQNGLDE 287
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACA-----------HGGLVKEAW-------YFFD 269
E L L EM G D +T +LLSA + H L++ Y D
Sbjct: 288 EGLMLVYEMQKQGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFDGMDSYLID 347
Query: 270 CLGKNGMTPKSEH--------------YACMVDVMARAGQVAEA---YQFLCQIPIQPTA 312
K+G+ S+ + ++ + G V +A ++ + + ++P A
Sbjct: 348 MYAKSGLIRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNA 407
Query: 313 SMLGALLNGCMNHGKLDLAETV 334
L ++L C + G ++L + +
Sbjct: 408 VTLASILPACSSLGSINLGKQL 429
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 87/164 (53%), Gaps = 5/164 (3%)
Query: 97 QVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLG 156
+VF M ++DV++W+ ++ YV+ Y EA+ F M G KP+ V+ V+V A + +G
Sbjct: 55 KVFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVNVFPAISSVG 114
Query: 157 ALDKGRMMHHYVID--NELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWN 214
+++ ++ NE L + +S + MYA+ G + VF S L K ++V WN
Sbjct: 115 DFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEV--WN 172
Query: 215 SMIGGFACHGLVKESLDLFSE-MHIVGVKPDEITYLNLLSACAH 257
+MIGG + E + LF + M D++T+L+ L+A +
Sbjct: 173 TMIGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQ 216
>30169.m006317 pentatricopeptide repeat-containing protein, putative
Length = 597
Score = 231 bits (590), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 133/389 (34%), Positives = 206/389 (52%), Gaps = 35/389 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ GV PD T + KAS+ IHG I + G+ S ++ SLI
Sbjct: 230 MMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNGSLI-------- 281
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
D YAK + A ++ M ++DV+S++ ++ GY RK
Sbjct: 282 -----------------------DAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARK 318
Query: 121 GDYD-EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
Y EAL +F++M+ + ++VT ++L CA + +L GR +H I + +
Sbjct: 319 CSYSREALDLFKDMQHIFMEIDDVTFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVAT 378
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+LVDMYAK G I++A F MK +V W S+I G+ HG E++ L+ +M
Sbjct: 379 GNALVDMYAKSGEIEDATRAFYE--MKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYE 436
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFD-CLGKNGMTPKSEHYACMVDVMARAGQVAE 298
G+KP++IT+L+LL AC+H GL E W F+ + K + P++EHY+CM+D+ AR GQ+ E
Sbjct: 437 GLKPNDITFLSLLFACSHSGLTGEGWECFNNMITKYNILPRAEHYSCMIDLFARGGQLEE 496
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
AY +C++ I+P +S+ GA+L C +G + L E L+ ++P YV L+ +YA
Sbjct: 497 AYNMICKMNIKPNSSLWGAILGACSIYGHMSLGEVAATHLLRMDPENSANYVVLAGIYAA 556
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVE 387
WDKA MR ME +KK PGYS ++
Sbjct: 557 SGSWDKACRMRNLMEYRSLKKIPGYSIIQ 585
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 171/387 (44%), Gaps = 44/387 (11%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G IH +I + G++S+ +S LI Y F + NARK
Sbjct: 56 GCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARK---------------------- 93
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
VFD MPE++V+SW+ I GY + G Y +AL VF +M +G + N+ T SV
Sbjct: 94 ---------VFDRMPERNVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSV 144
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
L AC L L++G +H + N L ++++LVD+++KCG +++A ++F + M
Sbjct: 145 LRACTGLRCLERGMQIHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFET--MSER 202
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFF 268
DV WN++IGG+A +S +F M GV PD T ++L A + + +
Sbjct: 203 DVVSWNAVIGGYAAQDFNDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIH 262
Query: 269 DCLGKNGMTPKSEHYACMVDVMARAGQVAEAY----QFLCQIPIQPTASMLGALLNGCMN 324
+ + G + ++D A++ + A L + I TA M G +
Sbjct: 263 GIIIQLGFGSHIDLNGSLIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYS 322
Query: 325 HGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYS 384
LDL + + +E++ D + + NV A + S+ + + +K P Y
Sbjct: 323 REALDLFKDMQHIFMEID---DVTFCTMLNVCADI----ASLSIGRQIHALAIKYKPSYD 375
Query: 385 FVEMHGALHRFVAHDKSHPSSEQIYMM 411
+ + + + ++ Y M
Sbjct: 376 VATGNALVDMYAKSGEIEDATRAFYEM 402
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 128/258 (49%), Gaps = 36/258 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R GV + T+ + +A L E G+ IHG I K +RF+ N +
Sbjct: 129 MGRAGVRANQFTYGSVLRACTGLRCLERGMQIHGCIQK-----NRFIGNLFVQ------- 176
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
++++D ++KCG++ AR +F+ M E+DV+SW+ +I GY +
Sbjct: 177 -------------------SALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQ 217
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
D++ +F M G P+ T+ SVL A + L K +H +I + L
Sbjct: 218 DFNDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLN 277
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA--CHGLVKESLDLFSEMHI 238
SL+D YAK ++ A +++S L K DV + +++ G+A C +E+LDLF +M
Sbjct: 278 GSLIDAYAKSEGMKSASALYKSMLKK--DVISFTAIMTGYARKC-SYSREALDLFKDMQH 334
Query: 239 VGVKPDEITYLNLLSACA 256
+ ++ D++T+ +L+ CA
Sbjct: 335 IFMEIDDVTFCTMLNVCA 352
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
+ +L C L +G ++H ++I N L L T L+ Y K G A VF M
Sbjct: 41 MKILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDR--M 98
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
+V W + I G+A +G +++L +FS+M GV+ ++ TY ++L AC ++
Sbjct: 99 PERNVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGM 158
Query: 266 YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
C+ KN + +VD+ ++ G + +A
Sbjct: 159 QIHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDA 192
>30074.m001416 pentatricopeptide repeat-containing protein, putative
Length = 793
Score = 231 bits (589), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 133/423 (31%), Positives = 215/423 (50%), Gaps = 34/423 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R G+ P TF + K + E G IH +I K +SD F+ ++LI +YS
Sbjct: 310 MQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGS 369
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ K F+ P+ D++SW+ +I GY +
Sbjct: 370 TEDQLKCFNS-------------------------------TPKLDIVSWTTMIAGYAQN 398
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G ++ ALA+F E+ SG KP+E + ++L ACA + A G +H Y + + +++
Sbjct: 399 GQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQ 458
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
S + MYAK G + A F +K DV W+ MI A HG K++++LF M G
Sbjct: 459 NSQISMYAKSGNLDSAKITFEE--IKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYG 516
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
+ P++IT+L +L+AC+HGGLV+E +++ + K+ M +H C+VD+++RAG++ +A
Sbjct: 517 IHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDA 576
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
F+ M LL+GC + + + V KLIEL+P + YV L N+Y
Sbjct: 577 KNFILNSGFGDHPVMWRTLLSGCRIYKDIVTGKHVAEKLIELDPQESSSYVLLYNIYTDA 636
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
A +RE M+ G++K PG S++E+ +H FV D SHP S+ IY L ++ +
Sbjct: 637 GIDLPATKIRELMKDRGIRKEPGQSWIEVGNEVHSFVVGDISHPMSQIIYKKLEGMLEKK 696
Query: 420 KHI 422
+ I
Sbjct: 697 RKI 699
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 119/220 (54%), Gaps = 12/220 (5%)
Query: 47 VSNSLIHMYSSFRDIPNARKVFDGIPVK-----NLVSWNSMLDGYAKCGDISMARQVFDL 101
+ ++L Y + ++ + K G VK ++V ++LD YAK G + A Q+F
Sbjct: 214 LGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRT 273
Query: 102 MPEQDVLSWSCLIDGYVRKGDYD-----EALAVFEEMRVSGPKPNEVTMVSVLCACAHLG 156
P Q+V+ ++ +I G+++ D D EAL +F +M+ G KP++ T S++ C H+
Sbjct: 274 SPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIE 333
Query: 157 ALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSM 216
A + G+ +H ++ + + + ++L+++Y+ G+ ++ L F S D+ W +M
Sbjct: 334 AFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNS--TPKLDIVSWTTM 391
Query: 217 IGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
I G+A +G + +L LF E+ G KPDE +LSACA
Sbjct: 392 IAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACA 431
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 105/185 (56%), Gaps = 9/185 (4%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N ++D Y KC I AR +F+ E D +SW+ LI GY R G Y+E L + +M +G +
Sbjct: 149 NLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLR 208
Query: 140 PNEVTMVSVLCAC-AHLGAL-DKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL 197
N T+ S L +C +L + G+ +H Y + L L +V+ T+L+DMYAK G + +A+
Sbjct: 209 LNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAI 268
Query: 198 HVFRSGLMKPSDVFIWNSMIGGFACHGLVK-----ESLDLFSEMHIVGVKPDEITYLNLL 252
+FR+ +V ++N+MI GF + E+L LFS+M G+KP + T+ +++
Sbjct: 269 QLFRTS--PNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSII 326
Query: 253 SACAH 257
C H
Sbjct: 327 KICNH 331
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 117/246 (47%), Gaps = 5/246 (2%)
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
Y+K G++ A+++FD M E+ V+S++ LI GY G Y +A+ +F E R++ K ++ +
Sbjct: 54 YSKWGEMGNAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSY 113
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
VL AC + G+++H I L + L L+DMY KC I A +F S
Sbjct: 114 AGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESS-- 171
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC--AHGGLVKE 263
D WNS+I G+A G +E L L +MH G++ + T + L +C +V
Sbjct: 172 DELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSY 231
Query: 264 AWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCM 323
K G+ ++D+ A+ G + +A Q P Q M A++ G +
Sbjct: 232 GKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVV-MYNAMIAGFI 290
Query: 324 NHGKLD 329
+D
Sbjct: 291 QTEDID 296
>29986.m001622 magnesium/proton exchanger, putative
Length = 1015
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/259 (47%), Positives = 166/259 (64%), Gaps = 4/259 (1%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
GV PD TFPFL ++ G IH I G D FV SLI+MYSS + A
Sbjct: 76 GVKPDFHTFPFLLQSFHSQPHLVSGKQIHTQIHHFGLVHDSFVQTSLINMYSSCGNFSFA 135
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
R++FD I +L SWNS+++ K G + +AR +FD+MPE++V++WSC+I+G+V+ G+Y
Sbjct: 136 RQIFDEIAQPDLPSWNSIINASVKVGLVDVARGLFDVMPERNVITWSCMINGFVKCGEYK 195
Query: 125 EALAVFEEMR---VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRT 181
EALA+F EM+ V KPNE TM SVL AC LGAL+ G+ H Y+ E+ + +VL T
Sbjct: 196 EALALFREMQMLEVRDVKPNEFTMSSVLSACGRLGALEHGKWAHAYIEKCEMKIDIVLGT 255
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV 241
SL+DMYAKCG+I A VF L DV W++MI G A HG +E L+LFS+M G+
Sbjct: 256 SLIDMYAKCGSIDRARLVF-DNLGSNKDVMAWSAMISGLAMHGYGEEGLELFSKMVNQGL 314
Query: 242 KPDEITYLNLLSACAHGGL 260
+P+ +T+L +L AC HGGL
Sbjct: 315 RPNNVTFLAVLYACVHGGL 333
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 104/254 (40%), Gaps = 33/254 (12%)
Query: 106 DVLSWSCLIDGYVRKG-DYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMM 164
+ +W+ ++ +V+ ++V+ MR G KP+ T +L + L G+ +
Sbjct: 44 ESFTWNTILRFHVQASVRTHPPISVYLRMRYHGVKPDFHTFPFLLQSFHSQPHLVSGKQI 103
Query: 165 HHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF-------------------RSGL- 204
H + L ++TSL++MY+ CG A +F + GL
Sbjct: 104 HTQIHHFGLVHDSFVQTSLINMYSSCGNFSFARQIFDEIAQPDLPSWNSIINASVKVGLV 163
Query: 205 ---------MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV---GVKPDEITYLNLL 252
M +V W+ MI GF G KE+L LF EM ++ VKP+E T ++L
Sbjct: 164 DVARGLFDVMPERNVITWSCMINGFVKCGEYKEALALFREMQMLEVRDVKPNEFTMSSVL 223
Query: 253 SACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTA 312
SAC G ++ + + K M ++D+ A+ G + A +
Sbjct: 224 SACGRLGALEHGKWAHAYIEKCEMKIDIVLGTSLIDMYAKCGSIDRARLVFDNLGSNKDV 283
Query: 313 SMLGALLNGCMNHG 326
A+++G HG
Sbjct: 284 MAWSAMISGLAMHG 297
>29736.m002020 pentatricopeptide repeat-containing protein, putative
Length = 589
Score = 227 bits (579), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 133/424 (31%), Positives = 218/424 (51%), Gaps = 38/424 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + G PD TF L G+ +H + K E F+ N +I MYS F
Sbjct: 193 MRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYSKFNL 252
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I A KV F L+ E+D++SW+ L+
Sbjct: 253 IEEAEKV-------------------------------FGLIKEKDLISWNTLVTACCFC 281
Query: 121 GDYDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
D++ AL VF +M V KP++ T VL ACA L ++ G+ +H ++I + +
Sbjct: 282 KDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGV 341
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+LV+MYAKCG+I+ + VFR ++ WN++I F HGL +L+ F +M V
Sbjct: 342 SNALVNMYAKCGSIKNSYDVFRR--TSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTV 399
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAE 298
G+ PD +T++ LL+AC H GLV+E +F+ + + G+ P EH++C++D++ RAG++ E
Sbjct: 400 GIHPDSVTFVGLLTACNHAGLVEEGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQE 459
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
A +++ ++P +LG+LL+ C HG + + E + +L++L+P YV LSN+YA
Sbjct: 460 AEEYMEKLPFGHDPIILGSLLSACRLHGDMVIGEHLATQLLKLQPVTTSPYVLLSNLYAS 519
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQI---YMMLGFI 415
W + ++ G+KK PG+S +++ G +F D SH E+I ML +
Sbjct: 520 DEMWGGVAEAWKMLKYSGLKKEPGHSLIDVMGMFEKFTMGDLSHSRIEEIKDTIKMLNWT 579
Query: 416 VSQM 419
VS++
Sbjct: 580 VSEV 583
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 107/228 (46%), Gaps = 36/228 (15%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
GL++H K G SD VSN +I++YS K
Sbjct: 22 GLSLHAAALKTGMLSDIIVSNHVINLYS-------------------------------K 50
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
CG++ AR++FD M +++++SWS +I GY + G AL +F +MR+ PNE SV
Sbjct: 51 CGNVIFARRMFDEMSDRNLVSWSAIISGYDQTGQPLLALNLFSQMRIV---PNEYVFASV 107
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
+ ACA L AL +G +H + + +L+ MY KCG +AL V +M
Sbjct: 108 ISACASLTALSQGLQVHAQSLKLGCVSVSFVSNALISMYMKCGLCTDALLV--HNVMSEP 165
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
+ +N++I GF + ++ ++ F M G PD T+ LL C
Sbjct: 166 NAVSYNALIAGFVENQQPEKGIEAFKVMRQKGFAPDRFTFSGLLGICT 213
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 117/273 (42%), Gaps = 45/273 (16%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
+ P+ F + A A L GL +H K G S FVSN+LI M
Sbjct: 97 IVPNEYVFASVISACASLTALSQGLQVHAQSLKLGCVSVSFVSNALISM----------- 145
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
Y KCG + A V ++M E + +S++ LI G+V ++
Sbjct: 146 --------------------YMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEK 185
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
+ F+ MR G P+ T +L C +G +H +I L + + ++
Sbjct: 186 GIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIIT 245
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIVGVKPD 244
MY+K I+EA VF GL+K D+ WN+++ + +L +F +M + VKPD
Sbjct: 246 MYSKFNLIEEAEKVF--GLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPD 303
Query: 245 EITYLNLLSACA-----------HGGLVKEAWY 266
+ T+ +L+ACA HG L++ Y
Sbjct: 304 DFTFAGVLAACAGLASIRHGKQIHGHLIRTRQY 336
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 147 SVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK 206
S+L CA + A G +H + + +++ ++++Y+KCG + A +F M
Sbjct: 8 SLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDE--MS 65
Query: 207 PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
++ W+++I G+ G +L+LFS+M IV P+E + +++SACA
Sbjct: 66 DRNLVSWSAIISGYDQTGQPLLALNLFSQMRIV---PNEYVFASVISACA 112
>29830.m001392 pentatricopeptide repeat-containing protein, putative
Length = 578
Score = 226 bits (577), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 204/384 (53%), Gaps = 33/384 (8%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
GV P+ +T + A A L + G IHGY + G++ D +SLIH+Y R+
Sbjct: 224 GVRPNRVTLIAILPAFAELGCAKTGKEIHGYAFRHGFDLDHHFLSSLIHIYCRSRE---- 279
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
+ +A+ F+ +DV+ WS +I Y R D
Sbjct: 280 --------------------------GLQLAKLTFERSNVKDVVMWSSIIGSYCRSADSI 313
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
EAL +F MR G +PN VT+++V+ AC L +L G H Y++ L + +L+
Sbjct: 314 EALKLFRWMRADGTEPNSVTLLAVITACTTLTSLKNGYGTHGYIVKCGLNFDTYIGNALI 373
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
+MY+KCG + + +F+ M D W+++I + HG KE+L LF EM + GV+PD
Sbjct: 374 NMYSKCGCVVASHQIFKE--MHIKDSVSWSTLITAYGLHGHGKEALCLFHEMQLQGVEPD 431
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKNG-MTPKSEHYACMVDVMARAGQVAEAYQFL 303
+T+L +LSAC H GLVKE FD + K+G ++ EHYAC+VD++ ++G+V +A+ L
Sbjct: 432 AMTFLAVLSACNHSGLVKEGQQIFDNVKKDGKVSLTVEHYACLVDLLGKSGKVDDAFDIL 491
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWD 363
+P++P+ ++ +L++ C HG+L++AE + ++LI+ EP + LS +YA W
Sbjct: 492 RAMPMKPSTTIWSSLVSACKIHGRLEIAERLAQELIKSEPSNAANHTLLSMIYAESGNWF 551
Query: 364 KARSMREAMERMGVKKSPGYSFVE 387
+R M G+ K G+S V
Sbjct: 552 AVEDVRRLMRVQGLSKCYGFSQVS 575
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 141/283 (49%), Gaps = 4/283 (1%)
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
+A + DG K + S++D Y K GD MA +VFD + ++V+SW+ L+ G D
Sbjct: 150 HALVLIDGRIAKEIFVLTSLVDWYFKSGDSLMALRVFDQIEVKNVVSWTALVSGCSANLD 209
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTS 182
Y+ AL F M+++G +PN VT++++L A A LG G+ +H Y + L +S
Sbjct: 210 YNMALDCFRAMQINGVRPNRVTLIAILPAFAELGCAKTGKEIHGYAFRHGFDLDHHFLSS 269
Query: 183 LVDMYAKC-GAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV 241
L+ +Y + +Q A F +K DV +W+S+IG + E+L LF M G
Sbjct: 270 LIHIYCRSREGLQLAKLTFERSNVK--DVVMWSSIIGSYCRSADSIEALKLFRWMRADGT 327
Query: 242 KPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQ 301
+P+ +T L +++AC +K + + K G+ + ++++ ++ G V ++Q
Sbjct: 328 EPNSVTLLAVITACTTLTSLKNGYGTHGYIVKCGLNFDTYIGNALINMYSKCGCVVASHQ 387
Query: 302 FLCQIPIQPTASMLGALLN-GCMNHGKLDLAETVGRKLIELEP 343
++ I+ + S + G HGK L +L +EP
Sbjct: 388 IFKEMHIKDSVSWSTLITAYGLHGHGKEALCLFHEMQLQGVEP 430
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 99/189 (52%), Gaps = 3/189 (1%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
+ V NS + YAK A +VFD MP +D +SW+C+I+GY + G + + +F+EM
Sbjct: 60 DFVICNSFISFYAKSSCTESALKVFDTMPLKDPISWNCIINGYFQNGYFTQGFIMFKEMY 119
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV-IDNELPLTLVLRTSLVDMYAKCGAI 193
G P + SV+ C LG + GR +H V ID + + + TSLVD Y K G
Sbjct: 120 ECGIVPKPELVASVVSVCVRLGDMKLGRAIHALVLIDGRIAKEIFVLTSLVDWYFKSGDS 179
Query: 194 QEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
AL VF ++ +V W +++ G + + +LD F M I GV+P+ +T + +L
Sbjct: 180 LMALRVFDQ--IEVKNVVSWTALVSGCSANLDYNMALDCFRAMQINGVRPNRVTLIAILP 237
Query: 254 ACAHGGLVK 262
A A G K
Sbjct: 238 AFAELGCAK 246
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 4/206 (1%)
Query: 118 VRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
V KG + L ++E+ S N + SV+ AC+ G ++ V+ + L
Sbjct: 2 VSKGLNHQILKFYKELHSSDIYANAYIIPSVIKACSFSNCHHFGIQLYSIVLKSGLDSDF 61
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
V+ S + YAK + AL VF + M D WN +I G+ +G + +F EM+
Sbjct: 62 VICNSFISFYAKSSCTESALKVFDT--MPLKDPISWNCIINGYFQNGYFTQGFIMFKEMY 119
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEH-YACMVDVMARAGQV 296
G+ P +++S C G +K + +G K +VD ++G
Sbjct: 120 ECGIVPKPELVASVVSVCVRLGDMKLGRAIHALVLIDGRIAKEIFVLTSLVDWYFKSGDS 179
Query: 297 AEAYQFLCQIPIQPTASMLGALLNGC 322
A + QI ++ S AL++GC
Sbjct: 180 LMALRVFDQIEVKNVVSWT-ALVSGC 204
>30128.m008933 pentatricopeptide repeat-containing protein, putative
Length = 444
Score = 226 bits (575), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 165/247 (66%), Gaps = 4/247 (1%)
Query: 20 SAC--LLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLV 77
SAC L + G +H K G ES + N+LIHMYSS R+I +A+K+F+ + +
Sbjct: 167 SACAHLFAVKTGKLVHSLAVKIGIESYVNLQNALIHMYSSCREIDSAQKLFNVGYSLDQI 226
Query: 78 SWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG 137
SWNSM+ GY KCG+I A+ +FD+M ++D++SWS +I GY + + E LA+F+EM++ G
Sbjct: 227 SWNSMISGYLKCGEIEKAKALFDIMNDKDLVSWSAMISGYAQHDRFAETLALFQEMQLDG 286
Query: 138 PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL 197
KP+E T+VSV+ AC HL ALD+G+ +H Y+ N L + ++L T+L+DMY K G +++AL
Sbjct: 287 VKPDETTLVSVVSACTHLAALDQGKWIHLYLRKNGLKINVILGTTLIDMYMKFGCVEDAL 346
Query: 198 HVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
VF MK V WN++I G A +GLV SLD FSEM GV P+EIT++ +L AC H
Sbjct: 347 EVFHG--MKEKGVSTWNAVILGLALNGLVHMSLDTFSEMKDCGVVPNEITFVAVLVACRH 404
Query: 258 GGLVKEA 264
GLV+E
Sbjct: 405 MGLVEEG 411
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 120/362 (33%), Positives = 193/362 (53%), Gaps = 37/362 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML+ V PD+ T+P L ++ + + + G IH ++ K + D +V N+LI++YS ++
Sbjct: 21 MLQENVEPDNFTYPILLQSCSLRVAKFDGKLIHCHVLKMSFNFDVYVQNTLINLYSVCQN 80
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +ARKVFD PV +LVSWNS+L G GD++ A ++F M ++D++SWS LI GY +
Sbjct: 81 LGDARKVFDESPVLDLVSWNSILAGK---GDVTEAYRLFSEMCKKDLVSWSALISGYEQN 137
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G Y+EAL F +M G +EV +VSVL ACAHL A+ G+++H + + + L+
Sbjct: 138 GRYEEALVTFGKMNAYGIMVDEVVVVSVLSACAHLFAVKTGKLVHSLAVKIGIESYVNLQ 197
Query: 181 TSLVDMYAKCGAIQEALHVFRSG-----------------------------LMKPSDVF 211
+L+ MY+ C I A +F G +M D+
Sbjct: 198 NALIHMYSSCREIDSAQKLFNVGYSLDQISWNSMISGYLKCGEIEKAKALFDIMNDKDLV 257
Query: 212 IWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL 271
W++MI G+A H E+L LF EM + GVKPDE T ++++SAC H + + + L
Sbjct: 258 SWSAMISGYAQHDRFAETLALFQEMQLDGVKPDETTLVSVVSACTHLAALDQGKWIHLYL 317
Query: 272 GKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTAS----MLGALLNGCMNHGK 327
KNG+ ++D+ + G V +A + + + ++ +LG LNG + H
Sbjct: 318 RKNGLKINVILGTTLIDMYMKFGCVEDALEVFHGMKEKGVSTWNAVILGLALNG-LVHMS 376
Query: 328 LD 329
LD
Sbjct: 377 LD 378
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
+++ M +P+ T +L +C+ A G+++H +V+ + ++ +L+++Y+
Sbjct: 17 MYKWMLQENVEPDNFTYPILLQSCSLRVAKFDGKLIHCHVLKMSFNFDVYVQNTLINLYS 76
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
C + +A VF D+ WNS++ G G V E+ LFSEM K D +++
Sbjct: 77 VCQNLGDARKVFDES--PVLDLVSWNSILAG---KGDVTEAYRLFSEM----CKKDLVSW 127
Query: 249 LNLLSACAHGGLVKEAWYFFDCLGKNGM 276
L+S G +EA F + G+
Sbjct: 128 SALISGYEQNGRYEEALVTFGKMNAYGI 155
>29950.m001169 pentatricopeptide repeat-containing protein, putative
Length = 337
Score = 225 bits (574), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/337 (36%), Positives = 192/337 (56%), Gaps = 4/337 (1%)
Query: 54 MYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCL 113
MY + + NA FD +P KN V+WN M+ G K G + AR FD MPE++V+SW+ +
Sbjct: 1 MYLASGFLGNALLAFDEMPEKNSVTWNVMITGLVKWGKLEFARSFFDDMPEKNVVSWTGI 60
Query: 114 IDGYVRKGDYDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
IDGYVR E LA+F M G P+E+T++++L A + +G L ++H V
Sbjct: 61 IDGYVRMNRITEGLALFRRMVSFEGIAPSEITILAILPAISGIGELQNCGLIHCLVEKRG 120
Query: 173 LPLT-LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLD 231
+ + + S++D YAKCG I A F ++ ++ W S+I GFA HG+ +E++
Sbjct: 121 FNSSDIRVTNSIIDTYAKCGCIVSASRFFEEISVERKNLVSWTSIISGFAMHGMGQEAVK 180
Query: 232 LFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD-CLGKNGMTPKSEHYACMVDVM 290
F M G+KP+ +T+L++L+AC+HGGLV E FF+ + + + P +HY C+VD++
Sbjct: 181 RFENMERTGLKPNRVTFLSVLNACSHGGLVAEGHEFFEKMVNQYSILPDIKHYGCLVDML 240
Query: 291 ARAGQVAEAYQFLCQIPIQ-PTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRY 349
R G++ EA + IP + A + LL C HG ++ E V RK++E+E G Y
Sbjct: 241 GRTGRLEEAEKLALGIPSEIVNAVIWRTLLGACSFHGNSEIGERVTRKIMEMERGYGGDY 300
Query: 350 VGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFV 386
V + N++A R++ A +R M+ K PG+S V
Sbjct: 301 VLMYNIFAGVGRFEDAERLRVLMDERNAFKVPGHSLV 337
>29938.m000602 pentatricopeptide repeat-containing protein, putative
Length = 730
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 125/378 (33%), Positives = 206/378 (54%), Gaps = 16/378 (4%)
Query: 65 RKVFDGIP-VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
R +DG+ VKN +++ Y++C + A +F +++++W+ ++ GY
Sbjct: 358 RSFYDGVDNVKN-----ALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYTHMDRS 412
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE-LPLTLVLRTS 182
+EA +F EM +SG +PN VT+ S+L CA + L G+ H Y++ L+L S
Sbjct: 413 EEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNS 472
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
LVDMYA+ G + EA +F S + D + S+I G+ G +E+L LF EM +K
Sbjct: 473 LVDMYARSGKVLEAKRLFDS--ISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKKRHIK 530
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEAYQ 301
PD +T + +LSAC+H GLV E F+ + G+ P+ EH+ACMVD+ RAG + +A +
Sbjct: 531 PDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVDLFGRAGLLHKAKE 590
Query: 302 FLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRR 361
+ ++P +P+++M LL C HG ++ E KL+E+ P G YV ++N+YA
Sbjct: 591 MITRMPYRPSSAMWATLLGACRIHGNAEIGEWAAEKLLEMRPENSGYYVLIANMYAAAGC 650
Query: 362 WDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKH 421
W K +R M +GV+K+PG ++V++ F+ D S P ++Y +L + MK
Sbjct: 651 WSKLAKVRTYMRDLGVRKAPGCAWVDVGSGFFPFLVDDTSKPHVNKLYPLLEGLTELMK- 709
Query: 422 IVDYENQEYYFYDNEGKL 439
+ EY +N G +
Sbjct: 710 -----DAEYVGKENVGSV 722
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 163/312 (52%), Gaps = 9/312 (2%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G+ PD T+P + KA L G +H I + + FV NSL+ MY+ +
Sbjct: 185 MTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASCLGWNLFVHNSLVSMYAKTGE 244
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSCLIDG 116
+ AR +F+ + ++ VSWN+M+ GYA G A ++F M E ++++W+ + G
Sbjct: 245 LSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGKMRVEGIELNIITWNTIAGG 304
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
V+ G+++EAL + MR G + V + L AC+H+GA+ GR +H I +
Sbjct: 305 CVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGAIKLGREIHGSAIRSFYDGV 364
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
++ +L+ MY++C ++ A ++F+S + ++ WNSM+ G+ +E+ LF EM
Sbjct: 365 DNVKNALITMYSRCKYLRHAYNLFQS--TRTKNIITWNSMLSGYTHMDRSEEASFLFREM 422
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDC--LGKNGMTPKSEHYACMVDVMARAG 294
+ G++P+ +T ++L CA ++ F C L + G + +VD+ AR+G
Sbjct: 423 LLSGIEPNYVTIASILPLCARVANLQHG-KEFHCYILRRAGFKDYLLLWNSLVDMYARSG 481
Query: 295 QVAEAYQFLCQI 306
+V EA + I
Sbjct: 482 KVLEAKRLFDSI 493
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%)
Query: 71 IPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVF 130
I V LV++ + D A I+ + +P W+ LI YVR G + EAL+ +
Sbjct: 129 IIVPKLVTFYTNFDLLADAHTITENSNILHPLP------WNLLISSYVRNGLHGEALSAY 182
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
++M G +P++ T SVL AC + G+ +H + + L L + SLV MYAK
Sbjct: 183 KQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASCLGWNLFVHNSLVSMYAKT 242
Query: 191 GAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLN 250
G + A +F + M D WN+MI G+A G+ KE+ +LF +M + G++ + IT+
Sbjct: 243 GELSTARCLFEN--MLERDDVSWNTMISGYASKGMWKEAFELFGKMRVEGIELNIITWNT 300
Query: 251 LLSACAHGGLVKEA 264
+ C G +EA
Sbjct: 301 IAGGCVQSGNFEEA 314
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYI-TKAGYESDRFVSNSLIHMYSSFR 59
ML G+ P+++T + A + + G H YI +AG++ + NSL+ MY+
Sbjct: 422 MLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSG 481
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
+ A+++FD I ++ V++ S++ GY
Sbjct: 482 KVLEAKRLFDSISRRDEVTYTSLIAGYGI------------------------------- 510
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID--NELPLTL 177
+G+ EAL +F+EM+ KP+ VTMV+VL AC+H G + +G + + +P L
Sbjct: 511 QGEGREALKLFDEMKKRHIKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIP-RL 569
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
+VD++ + G + +A + +PS +W +++G HG + ++
Sbjct: 570 EHFACMVDLFGRAGLLHKAKEMITRMPYRPSSA-MWATLLGACRIHG--NAEIGEWAAEK 626
Query: 238 IVGVKPDEITYLNLLS 253
++ ++P+ Y L++
Sbjct: 627 LLEMRPENSGYYVLIA 642
>29681.m001332 pentatricopeptide repeat-containing protein, putative
Length = 765
Score = 223 bits (568), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 113/266 (42%), Positives = 166/266 (62%), Gaps = 3/266 (1%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
V P+ +T + A A + E G + YI + G + VSN+++ MY + +A
Sbjct: 228 NVRPNDVTMVGVLSACAKKMDLEFGRRVCHYIERNGINVNLTVSNAMLDMYVKNGSLEDA 287
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
R++FD + K++ SW +M+DGYAK D AR VFD MP QD+ +W+ LI Y + G
Sbjct: 288 RRLFDKMEEKDIFSWTTMIDGYAKRRDFDAARSVFDAMPRQDISAWNVLISAYEQDGKPK 347
Query: 125 EALAVFEEMRVS-GPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
EALA+F E+++S KP+EVT+VS L ACA LGA+D G +H Y+ ++ L L TSL
Sbjct: 348 EALAIFHELQLSKTAKPDEVTLVSTLSACAQLGAIDIGGWIHVYIKKQDIKLNCHLTTSL 407
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
+DMY+KCG +++AL +F S + DVF+W++MI G A HG + ++DLF EM V+P
Sbjct: 408 IDMYSKCGEVEKALDIFYS--VDRRDVFVWSAMIAGLAMHGRGRAAIDLFFEMQETKVRP 465
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFD 269
+ +T+ NLL AC+H GLV E FF+
Sbjct: 466 NAVTFTNLLCACSHTGLVNEGRMFFN 491
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 169/367 (46%), Gaps = 73/367 (19%)
Query: 7 FPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARK 66
FP+ TFPF+ KA+A + AIHG KA SD F+ NSLIH Y+S D+ +A
Sbjct: 129 FPNKFTFPFVIKAAAGVASLPFSQAIHGMAIKASLGSDLFILNSLIHCYASCGDLDSAYS 188
Query: 67 VFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEA 126
VF I K++VSWNSM+ G +V G D+A
Sbjct: 189 VFVKIEEKDVVSWNSMIKG-------------------------------FVLGGCPDKA 217
Query: 127 LAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDM 186
L +F+ M+ +PN+VTMV VL ACA L+ GR + HY+ N + + L + +++DM
Sbjct: 218 LELFQLMKAENVRPNDVTMVGVLSACAKKMDLEFGRRVCHYIERNGINVNLTVSNAMLDM 277
Query: 187 YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH----------------------- 223
Y K G++++A +F M+ D+F W +MI G+A
Sbjct: 278 YVKNGSLEDARRLFDK--MEEKDIFSWTTMIDGYAKRRDFDAARSVFDAMPRQDISAWNV 335
Query: 224 --------GLVKESLDLFSEMHIVGV-KPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN 274
G KE+L +F E+ + KPDE+T ++ LSACA G + + + K
Sbjct: 336 LISAYEQDGKPKEALAIFHELQLSKTAKPDEVTLVSTLSACAQLGAIDIGGWIHVYIKKQ 395
Query: 275 GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETV 334
+ ++D+ ++ G+V +A + + + A++ G HG+
Sbjct: 396 DIKLNCHLTTSLIDMYSKCGEVEKALDIFYSVD-RRDVFVWSAMIAGLAMHGR------- 447
Query: 335 GRKLIEL 341
GR I+L
Sbjct: 448 GRAAIDL 454
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 118/253 (46%), Gaps = 8/253 (3%)
Query: 95 ARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK-PNEVTMVSVLCACA 153
AR+VF+ + + ++ +W+ LI + + +L +F M P PN+ T V+ A A
Sbjct: 84 ARKVFEEISQPNLYTWNTLIRAFASSPEPIHSLLIFIRMLYDSPDFPNKFTFPFVIKAAA 143
Query: 154 HLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIW 213
+ +L + +H I L L + SL+ YA CG + A VF ++ DV W
Sbjct: 144 GVASLPFSQAIHGMAIKASLGSDLFILNSLIHCYASCGDLDSAYSVFVK--IEEKDVVSW 201
Query: 214 NSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK 273
NSMI GF G ++L+LF M V+P+++T + +LSACA ++ + +
Sbjct: 202 NSMIKGFVLGGCPDKALELFQLMKAENVRPNDVTMVGVLSACAKKMDLEFGRRVCHYIER 261
Query: 274 NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAET 333
NG+ M+D+ + G + +A + ++ + S +++G D A
Sbjct: 262 NGINVNLTVSNAMLDMYVKNGSLEDARRLFDKMEEKDIFSW-TTMIDGYAKRRDFDAA-- 318
Query: 334 VGRKLIELEPHQD 346
R + + P QD
Sbjct: 319 --RSVFDAMPRQD 329
>30128.m008775 pentatricopeptide repeat-containing protein, putative
Length = 736
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 147/442 (33%), Positives = 234/442 (52%), Gaps = 50/442 (11%)
Query: 2 LRVGVF-PDHLTFPFLAKASAC--LLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSF 58
+R G+ P+ LT+ L+ +AC L E G IHG + K G +S
Sbjct: 80 MRCGLIEPNFLTY--LSSLTACSGLQALEKGRQIHGLVWKLGIQS--------------- 122
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
NL ++++D Y+KCG + AR+VF+ E D +S + ++ G+
Sbjct: 123 ----------------NLCIESALMDLYSKCGSLEDARRVFESAVELDEVSMTVILVGFT 166
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
+ G +EA+ F +M G + + + +VL AC +L G+ +H VI L
Sbjct: 167 QNGFEEEAIEFFVKMVNIGTEVDPNMVSAVLGACGVDTSLGLGKQIHSLVIKRSLGSNPF 226
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+ L++MY+KCG +QE++ VF +GL + V WNSMI FA HG +L L+ EM
Sbjct: 227 VGNGLINMYSKCGELQESIKVF-NGLTCRNSVS-WNSMIAAFARHGDGFRALRLYEEMIQ 284
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVA 297
G P ++T+L+LL AC+H GLV + F + K G++P++EHYAC+VD++ RAG +
Sbjct: 285 EGAVPTDLTFLSLLHACSHVGLVDKGMKFLKSMTKVYGISPRAEHYACVVDMLGRAGLLN 344
Query: 298 EAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYA 357
EA + ++ I+P + ALL C G ++ + +L+ LEP + YV L+N+Y+
Sbjct: 345 EAKSLIERLSIKPDVLIWQALLGACSIRGDTEIGKYAAEQLLLLEPKKPAPYVLLANIYS 404
Query: 358 IFRRWD-KARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFI- 415
RWD +AR+++ M+ MGV K G S++E+ +H FV DK HP +E IY +L +
Sbjct: 405 SKGRWDERARTIKR-MKEMGVAKETGISWIEIEKKVHSFVVEDKKHPQAEIIYGVLAELF 463
Query: 416 --------VSQMKHIVDYENQE 429
V + I+ Y NQ+
Sbjct: 464 RLMIDEGYVPDKRFILYYMNQD 485
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 118/194 (60%), Gaps = 2/194 (1%)
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
+A KVFD +P ++ VSWN+M+ G+ + GD+ RQVFD M E++V++W+ +I G +
Sbjct: 10 DAVKVFDDMPTRDTVSWNTMVSGFLRNGDLDTGRQVFDEMLERNVITWTAIISGLSQNEM 69
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTS 182
Y+++L +F +MR +PN +T +S L AC+ L AL+KGR +H V + L + ++
Sbjct: 70 YEDSLGLFVQMRCGLIEPNFLTYLSSLTACSGLQALEKGRQIHGLVWKLGIQSNLCIESA 129
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
L+D+Y+KCG++++A VF S + D ++ GF +G +E+++ F +M +G +
Sbjct: 130 LMDLYSKCGSLEDARRVFESAV--ELDEVSMTVILVGFTQNGFEEEAIEFFVKMVNIGTE 187
Query: 243 PDEITYLNLLSACA 256
D +L AC
Sbjct: 188 VDPNMVSAVLGACG 201
>30170.m013878 pentatricopeptide repeat-containing protein, putative
Length = 1113
Score = 222 bits (566), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 122/360 (33%), Positives = 196/360 (54%), Gaps = 34/360 (9%)
Query: 28 LGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYA 87
+G HGY K+G ++ V+N LI MYS F ++ +F G
Sbjct: 757 IGHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSG----------------- 799
Query: 88 KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
M E+ ++SW+ +I G V+ G A+ +F +M++ G P+ +T+ S
Sbjct: 800 --------------MHEKPLISWNSVISGCVQAGRASHAIELFCQMKMHGCNPDAITIAS 845
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP 207
+L C+ LG L G +H Y++ N+L + + T+L+ MY KCG+I A VF+S + KP
Sbjct: 846 LLSGCSQLGYLQFGERLHSYILRNKLEMEDFVGTALIHMYTKCGSIVHAERVFKS-IGKP 904
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYF 267
+ WN+MI G++C+G ++L +SEM GV+PD+IT+L +L+AC HGGL+ E +
Sbjct: 905 C-LATWNAMISGYSCYGFEHKALTCYSEMQEQGVEPDKITFLGVLAACTHGGLIHEGRRY 963
Query: 268 FDCLGK-NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
F + K M P +H ACMV ++AR G EA F+ + +P +++ GA L+ C H
Sbjct: 964 FQIMTKVYDMVPTLQHCACMVGLLARVGLFEEALLFIKNMEKEPDSAVWGAFLSACCIHQ 1023
Query: 327 KLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFV 386
++ L E + +KL L+ G YV +SN+YA+ RWD +RE M+ G + G+ +
Sbjct: 1024 EVKLGEYLAKKLYLLDCRNGGLYVLMSNLYAVTGRWDDVARVREMMKDAGGDGNSGWKLL 1083
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 126/251 (50%), Gaps = 9/251 (3%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
++LD Y K G +S A FD MP +DV+SW+ LI GY R G AL +F +M G
Sbjct: 481 TALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNGYDFSALELFVQMLKLGFC 540
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
P + T+V +L +C L + +G+ +H + I + L L ++ +L MYAKCG ++ A ++
Sbjct: 541 PRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKNALTSMYAKCGDLEAAEYL 600
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F M V WN+MIG + +G E++ +F M GV+ ++T ++L SA A+
Sbjct: 601 FEE--MMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEVSQVTIMSLPSANAN-- 656
Query: 260 LVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALL 319
E+ + + K G+ + ++ + AR G A +P Q L A++
Sbjct: 657 --PESIHCYTI--KVGLADDASVVTSLICMYARYGSTDHAELLYWSLP-QKNLVSLTAII 711
Query: 320 NGCMNHGKLDL 330
G L L
Sbjct: 712 TSYAEAGNLGL 722
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 164/380 (43%), Gaps = 77/380 (20%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML++G P T L + L G +IHG+ K+G D V N+L MY
Sbjct: 534 MLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKNALTSMY----- 588
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AKCGD+ A +F+ M ++ V+SW+ +I Y +
Sbjct: 589 --------------------------AKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQN 622
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +DEA+ VF+ M +G + ++VT++S+ A A+ ++ H Y I L +
Sbjct: 623 GFFDEAMFVFKRMIGAGVEVSQVTIMSLPSANANPESI------HCYTIKVGLADDASVV 676
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
TSL+ MYA+ G+ A ++ S + ++ ++I +A G + ++ FS+MH +
Sbjct: 677 TSLICMYARYGSTDHAELLYWS--LPQKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLN 734
Query: 241 VKPDEITYLNLLSACA-----------HGGLVKEAWYFFDCLGK---------------- 273
+KPD + L++L A HG +K F+ +
Sbjct: 735 MKPDSVAMLSILHGIADPVHICIGHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALF 794
Query: 274 ---NGMTPKSE-HYACMVDVMARAGQVAEAYQFLCQIPI---QPTASMLGALLNGCMNHG 326
+GM K + ++ +AG+ + A + CQ+ + P A + +LL+GC G
Sbjct: 795 GLFSGMHEKPLISWNSVISGCVQAGRASHAIELFCQMKMHGCNPDAITIASLLSGCSQLG 854
Query: 327 KLDLAET----VGRKLIELE 342
L E + R +E+E
Sbjct: 855 YLQFGERLHSYILRNKLEME 874
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G PD +T L + L + G +H YI + E + FV +LIHMY+ I +A
Sbjct: 835 GCNPDAITIASLLSGCSQLGYLQFGERLHSYILRNKLEMEDFVGTALIHMYTKCGSIVHA 894
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
+VF I L +WN+M+ GY SC G+ K
Sbjct: 895 ERVFKSIGKPCLATWNAMISGY------------------------SCY--GFEHK---- 924
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID-NELPLTLVLRTSL 183
AL + EM+ G +P+++T + VL AC H G + +GR + ++ TL +
Sbjct: 925 -ALTCYSEMQEQGVEPDKITFLGVLAACTHGGLIHEGRRYFQIMTKVYDMVPTLQHCACM 983
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
V + A+ G +EAL +F + K D +W + + H VK
Sbjct: 984 VGLLARVGLFEEAL-LFIKNMEKEPDSAVWGAFLSACCIHQEVK 1026
>28649.m000213 pentatricopeptide repeat-containing protein, putative
Length = 480
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 118/304 (38%), Positives = 183/304 (60%), Gaps = 35/304 (11%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMY----- 55
M G+ PD TF FL KA L R +G IHG K G++ + FV N+L++ +
Sbjct: 104 MENCGIKPDKFTFSFLLKACTRLEWRNMGFCIHGKALKHGFQENTFVRNTLVYYHAKCGD 163
Query: 56 ----------SSFRDIPN----------------ARKVFDGIPVKNLVSWNSMLDGYAKC 89
S+ RD+ AR++FD +PVK+LV+WN ++ Y K
Sbjct: 164 LGIAREMFDDSAKRDVVAWSALTAGYARRGELCMARRLFDEMPVKDLVAWNVIITAYVKR 223
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
G+++ AR++F+ +P +DV++W+ +I G+V G+ ++AL +FEEM G +P+EVTM+S+L
Sbjct: 224 GEMACARKLFNEVPRRDVVTWNAMIAGFVHCGENEQALEMFEEMISVGEQPDEVTMLSLL 283
Query: 150 CACAHLGALDKGRMMHHYVIDNEL-PLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
AC LG L+ G+ +H +++ L L+++L +L MYAKCG+I+ AL VFR M+
Sbjct: 284 SACTDLGDLEVGKKVHSSILEMSLGDLSVLLGNALTYMYAKCGSIERALEVFRG--MREK 341
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMH-IVGVKPDEITYLNLLSACAHGGLVKEAWYF 267
DV WNS+I G A HG +ES+ LF EM + +KP+EIT++ +L AC+H G V+E +
Sbjct: 342 DVTTWNSVIVGLALHGHAEESIHLFREMQRLNNIKPNEITFVGVLVACSHAGKVEEGQRY 401
Query: 268 FDCL 271
FD +
Sbjct: 402 FDLM 405
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 131/287 (45%), Gaps = 13/287 (4%)
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
G I A Q+FD + E D+ W+ ++ G + +A++++ +M G KP++ T +L
Sbjct: 61 GTIDYAHQLFDQVAEPDIFMWNTMMRGSSQSPSPIKAVSLYTQMENCGIKPDKFTFSFLL 120
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
AC L + G +H + + +R +LV +AKCG + A +F + D
Sbjct: 121 KACTRLEWRNMGFCIHGKALKHGFQENTFVRNTLVYYHAKCGDLGIAREMFDDSAKR--D 178
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD 269
V W+++ G+A G + + LF EM + D + + +++A G + A F+
Sbjct: 179 VVAWSALTAGYARRGELCMARRLFDEMPV----KDLVAWNVIITAYVKRGEMACARKLFN 234
Query: 270 CLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLD 329
+ + + + A V Q E ++ + + QP + +LL+ C + G L+
Sbjct: 235 EVPRRDVVTWNAMIAGFVHC-GENEQALEMFEEMISVGEQPDEVTMLSLLSACTDLGDLE 293
Query: 330 LAETVGRKLIELEPHQDGRYVG--LSNVYA----IFRRWDKARSMRE 370
+ + V ++E+ +G L+ +YA I R + R MRE
Sbjct: 294 VGKKVHSSILEMSLGDLSVLLGNALTYMYAKCGSIERALEVFRGMRE 340
>30147.m014156 pentatricopeptide repeat-containing protein, putative
Length = 554
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/271 (43%), Positives = 167/271 (61%), Gaps = 11/271 (4%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML + PD LTFPFL K + G IHG+ K G SD FV NSLI YS+
Sbjct: 99 MLCNDISPDCLTFPFLLKECTRNVAIYGGRGIHGHAIKLGLYSDLFVQNSLISFYSACEF 158
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMP-EQDVLSWSCLIDGYVR 119
+ N+RK+FD + +++VSWNSM+ GY + GD+ + +F M ++V++W+ +I G+V+
Sbjct: 159 VSNSRKLFDEMSNRDVVSWNSMIIGYLRSGDLDQSLNLFRKMKINRNVITWNSIITGFVQ 218
Query: 120 KGDYDEALAVFEEMRV--------SGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN 171
G EAL F EM+ + +P+++T+ SVL ACAHLGA+D G+ +H Y+ +
Sbjct: 219 GGRPKEALEFFHEMQCLRDDDGINNKVRPDKITIASVLSACAHLGAIDHGKWVHSYLRRS 278
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLD 231
L +V+ T+LVDMY KCG +Q A VFR M D W +MI FA +G KE+ D
Sbjct: 279 GLECDMVIGTALVDMYGKCGCLQRAYEVFRE--MSEKDTLAWTAMISVFALNGFGKEAFD 336
Query: 232 LFSEMHIVGVKPDEITYLNLLSACAHGGLVK 262
+F+EM GVKP+ +T++ LLSACAH GLV+
Sbjct: 337 MFNEMEAGGVKPNLVTFVGLLSACAHSGLVE 367
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 118/267 (44%), Gaps = 45/267 (16%)
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKG--DYD-----EALAVFEEMRVSGPKPNE 142
G ++ A +F + + ++ ++ +I Y K DYD +AL ++++M + P+
Sbjct: 49 GSLAYAADIFHYIKKPNLPFYNIMIRAYASKSNVDYDDARLCQALILYKQMLCNDISPDC 108
Query: 143 VTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF-- 200
+T +L C A+ GR +H + I L L ++ SL+ Y+ C + + +F
Sbjct: 109 LTFPFLLKECTRNVAIYGGRGIHGHAIKLGLYSDLFVQNSLISFYSACEFVSNSRKLFDE 168
Query: 201 -----------------RSGLMKPS-----------DVFIWNSMIGGFACHGLVKESLDL 232
RSG + S +V WNS+I GF G KE+L+
Sbjct: 169 MSNRDVVSWNSMIIGYLRSGDLDQSLNLFRKMKINRNVITWNSIITGFVQGGRPKEALEF 228
Query: 233 FSEMHIV--------GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYA 284
F EM + V+PD+IT ++LSACAH G + + L ++G+
Sbjct: 229 FHEMQCLRDDDGINNKVRPDKITIASVLSACAHLGAIDHGKWVHSYLRRSGLECDMVIGT 288
Query: 285 CMVDVMARAGQVAEAYQFLCQIPIQPT 311
+VD+ + G + AY+ ++ + T
Sbjct: 289 ALVDMYGKCGCLQRAYEVFREMSEKDT 315
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 70/157 (44%), Gaps = 31/157 (19%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V PD +T + A A L + G +H Y+ ++G E D + +L+ MY
Sbjct: 245 VRPDKITIASVLSACAHLGAIDHGKWVHSYLRRSGLECDMVIGTALVDMY---------- 294
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
KCG + A +VF M E+D L+W+ +I + G E
Sbjct: 295 ---------------------GKCGCLQRAYEVFREMSEKDTLAWTAMISVFALNGFGKE 333
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR 162
A +F EM G KPN VT V +L ACAH G ++ GR
Sbjct: 334 AFDMFNEMEAGGVKPNLVTFVGLLSACAHSGLVETGR 370
>29584.m000246 basic helix-loop-helix-containingprotein, putative
Length = 310
Score = 219 bits (557), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 175/294 (59%), Gaps = 33/294 (11%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
MLR + P TF L KA + + G +HG++ + G ES FV +L+ YS+
Sbjct: 1 MLRSKILPSSYTFSSLIKACGLASEVKFGEVVHGHVWRHGLESHVFVQTALVDFYSTVGR 60
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ--------------- 105
I ++KVFD +P +++ +W +M+ A+ GD+S AR++FD+MPE+
Sbjct: 61 IIESKKVFDEMPERDIFAWATMVTSLARIGDMSSARRLFDMMPEKNTAAWNTLIYGYSKL 120
Query: 106 ----------------DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
D++SW+ +++ Y + + EAL VF +M +G P+EVTM +V+
Sbjct: 121 RDLESAEFLFSQMHERDIISWTTMVNCYAQNKKFGEALVVFNQMIKTGICPDEVTMATVI 180
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
ACAHLGALD G+ +H YV+ N L + + +SL+DMYAKCG++ +L VF ++ +
Sbjct: 181 SACAHLGALDLGKEIHLYVMQNGFDLDVYIGSSLIDMYAKCGSLDRSLLVFFK--LQEKN 238
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKE 263
+F WNS+I G A HG KE+L++F +M +KP+ +T++++L+ACAH GLV+E
Sbjct: 239 LFCWNSVIEGLAAHGYAKEALEMFRKMGREKIKPNGVTFISVLNACAHAGLVEE 292
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 31/161 (19%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M++ G+ PD +T + A A L +LG IH Y+ + G++ D ++ +SLI M
Sbjct: 164 MIKTGICPDEVTMATVISACAHLGALDLGKEIHLYVMQNGFDLDVYIGSSLIDM------ 217
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
YAKCG + + VF + E+++ W+ +I+G
Sbjct: 218 -------------------------YAKCGSLDRSLLVFFKLQEKNLFCWNSVIEGLAAH 252
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
G EAL +F +M KPN VT +SVL ACAH G +++G
Sbjct: 253 GYAKEALEMFRKMGREKIKPNGVTFISVLNACAHAGLVEEG 293
>30115.m001175 pentatricopeptide repeat-containing protein, putative
Length = 611
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 117/309 (37%), Positives = 181/309 (58%), Gaps = 8/309 (2%)
Query: 81 SMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKP 140
++L YAKCG I A VF+LM + D+++W+ +I G+V +A+ F EM+ K
Sbjct: 306 ALLTMYAKCGRIQDAINVFELMDKSDIVTWNAMILGFVELDLGKQAIECFREMQRMDIKN 365
Query: 141 NEVTMVSVLCACAHLGALDKGRMMHHYVIDN-ELPLTLVLRTSLVDMYAKCGAIQEALHV 199
++ T+ ++L C L G +H YV + L + + +++ MY KCG ++ A +
Sbjct: 366 DQTTISTILPVCD----LQYGNPIHAYVRKSITLSSVVTVWNAVIHMYCKCGCVRSAYTI 421
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F S M DV WN+MIGGF HG + +L L EM + G+ P+ T+ ++LSAC+H G
Sbjct: 422 FCS--MPNKDVVSWNTMIGGFGMHGHGQAALKLLKEMILSGIFPNSTTFTSVLSACSHSG 479
Query: 260 LVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGAL 318
LV E + F + ++ +TP+ EHY+C+VD++ARAGQ A+A F+ ++P++P S+ GAL
Sbjct: 480 LVDEGFRLFRSMTEDYSITPRMEHYSCIVDMLARAGQFADAVTFIHKMPLEPDKSIWGAL 539
Query: 319 LNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVK 378
L C + LD +LI +EP G YV LSN+YA RWD A +R+ +E G+
Sbjct: 540 LAACRAYQNLDFGRLAAEQLIRMEPKCAGHYVTLSNIYARAGRWDDAGRVRKEIEGKGLV 599
Query: 379 KSPGYSFVE 387
K G S +E
Sbjct: 600 KPSGQSLIE 608
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 176/372 (47%), Gaps = 60/372 (16%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V PD+ FP + +A LL E G+ IH + G ES+ V NSLI MY + +AR
Sbjct: 92 VLPDNYVFPKVLRACTQLLWFEGGIWIHKDVIVCGCESNLQVCNSLIDMYVKCGNARSAR 151
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSCLIDGYVRKG 121
VF+ + ++L SWNSM+ GY G +A ++ + M E DV++W+ L+D Y + G
Sbjct: 152 LVFEEMEERDLFSWNSMISGYVSNGLADLAVELLNCMRLDGFEPDVVTWNTLMDAYCQMG 211
Query: 122 DYDEA-------------------------------LAVFEEMRVSG-PKPNEVTMVSVL 149
+DEA L VF++M + P+ + SVL
Sbjct: 212 RFDEAWEVLKQIEQPNIISWTTLISSYSKIGEHDMSLRVFQDMIIREVVSPDLDCLCSVL 271
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTS----LVDMYAKCGAIQEALHVFRSGLM 205
+C H+GAL G+ +H Y ++ V +S L+ MYAKCG IQ+A++VF LM
Sbjct: 272 VSCRHIGALRSGKEIHGY--GTKMETNTVFYSSAGAALLTMYAKCGRIQDAINVFE--LM 327
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC--AHGGLVKE 263
SD+ WN+MI GF L K++++ F EM + +K D+ T +L C +G +
Sbjct: 328 DKSDIVTWNAMILGFVELDLGKQAIECFREMQRMDIKNDQTTISTILPVCDLQYGNPIHA 387
Query: 264 AWYFFDCLGKNGMTPKS--EHYACMVDVMARAGQVAEAYQFLCQIPIQPTAS---MLGAL 318
+ +T S + ++ + + G V AY C +P + S M+G
Sbjct: 388 -------YVRKSITLSSVVTVWNAVIHMYCKCGCVRSAYTIFCSMPNKDVVSWNTMIGGF 440
Query: 319 LNGCMNHGKLDL 330
G HG+ L
Sbjct: 441 --GMHGHGQAAL 450
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 109/237 (45%), Gaps = 33/237 (13%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G IH IT +G+ D F+ LI MY A
Sbjct: 14 GKQIHQQITVSGWGKDPFMLTKLIQMY-------------------------------AD 42
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
C + A+++FD MP+ +V +W+ + Y+R G YD+ + + M+ S P+ V
Sbjct: 43 CDHLFSAQRLFDKMPQPNVYAWTAIFGFYLRHGMYDKCVQNYGFMKYSDVLPDNYVFPKV 102
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
L AC L + G +H VI L + SL+DMY KCG + A VF M+
Sbjct: 103 LRACTQLLWFEGGIWIHKDVIVCGCESNLQVCNSLIDMYVKCGNARSARLVFEE--MEER 160
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
D+F WNSMI G+ +GL +++L + M + G +PD +T+ L+ A G EAW
Sbjct: 161 DLFSWNSMISGYVSNGLADLAVELLNCMRLDGFEPDVVTWNTLMDAYCQMGRFDEAW 217
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 91/179 (50%), Gaps = 5/179 (2%)
Query: 67 VFDGIPVKNLVS-WNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
V I + ++V+ WN+++ Y KCG + A +F MP +DV+SW+ +I G+ G
Sbjct: 389 VRKSITLSSVVTVWNAVIHMYCKCGCVRSAYTIFCSMPNKDVVSWNTMIGGFGMHGHGQA 448
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-RMMHHYVIDNELPLTLVLRTSLV 184
AL + +EM +SG PN T SVL AC+H G +D+G R+ D + + + +V
Sbjct: 449 ALKLLKEMILSGIFPNSTTFTSVLSACSHSGLVDEGFRLFRSMTEDYSITPRMEHYSCIV 508
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
DM A+ G +A+ ++P D IW +++ AC + ++ ++P
Sbjct: 509 DMLARAGQFADAVTFIHKMPLEP-DKSIWGALLA--ACRAYQNLDFGRLAAEQLIRMEP 564
>30055.m001630 pentatricopeptide repeat-containing protein, putative
Length = 384
Score = 217 bits (553), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 112/286 (39%), Positives = 174/286 (60%), Gaps = 9/286 (3%)
Query: 1 MLRVGVFPDHLTFPFLAK--ASACLLKRELGLAIHGYITKAGYES-DRFVSNSLIHMYSS 57
M V P+H+TF L A + +G +IH Y+ K G ++ + V +L+ MY+
Sbjct: 85 MRLAAVEPNHITFATLISFCADFPFQGKSIGPSIHAYVRKLGLDTCNVMVGTALVDMYAK 144
Query: 58 FRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGY 117
+ AR +FD + VKN VSWN+M+DGY + G+ A ++FD MPE+D +SW+ IDG+
Sbjct: 145 CGKVQLARLIFDDLKVKNSVSWNTMIDGYMRNGETGSAMELFDEMPEKDAISWTVFIDGF 204
Query: 118 VRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
++KG +++AL F EM+VS +P+ VT+++VL ACA+LGAL G +H YV++ E +
Sbjct: 205 IKKGHFEQALEWFREMQVSKVEPDYVTIIAVLSACANLGALGLGLWIHRYVLEKEFRNNV 264
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
+ SL+DMY++CG I+ A VF L + + WNS+I GFA +G +E+L+ F M
Sbjct: 265 RIGNSLIDMYSRCGCIELARQVFHKMLKR--TLVSWNSIIVGFAANGFAEEALEYFGLMQ 322
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK----NGMTPK 279
G KPD +++ L+AC+H G+V E FD + + N + PK
Sbjct: 323 KEGFKPDGVSFTGALTACSHAGMVDEGLKCFDIMKRHFTFNTVNPK 368
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 32/185 (17%)
Query: 107 VLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK--GRMM 164
++W+ I + G EA ++F +MR++ +PN +T +++ CA K G +
Sbjct: 59 TIAWTSSISRHCCNGQLPEAASLFTQMRLAAVEPNHITFATLISFCADFPFQGKSIGPSI 118
Query: 165 HHYVIDNEL-PLTLVLRTSLVDMYAKCGAIQEALHVF-------------------RSG- 203
H YV L +++ T+LVDMYAKCG +Q A +F R+G
Sbjct: 119 HAYVRKLGLDTCNVMVGTALVDMYAKCGKVQLARLIFDDLKVKNSVSWNTMIDGYMRNGE 178
Query: 204 ---------LMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
M D W I GF G +++L+ F EM + V+PD +T + +LSA
Sbjct: 179 TGSAMELFDEMPEKDAISWTVFIDGFIKKGHFEQALEWFREMQVSKVEPDYVTIIAVLSA 238
Query: 255 CAHGG 259
CA+ G
Sbjct: 239 CANLG 243
>29093.m000079 pentatricopeptide repeat-containing protein, putative
Length = 708
Score = 215 bits (547), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 133/421 (31%), Positives = 209/421 (49%), Gaps = 35/421 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + G PD T+ + A + ++ G ++HG + K G E + N++I MY
Sbjct: 296 MQQFGFEPDIYTYTTIISACS---HKDNGKSLHGLVIKRGLEQLVPICNAVIAMYLE--- 349
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
S NSM D A VF M +D +SW+ ++ G+ +
Sbjct: 350 ----------------SSSNSMED----------ALNVFHSMESKDRVSWNSILTGFSQT 383
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G + AL +F MR + + +VL +C+ L L G+ +H + + +
Sbjct: 384 GHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLTVKSGFESNDFVA 443
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+SL+ MY+KCG I++A F S WNS++ +A HG +L LF +M
Sbjct: 444 SSLIFMYSKCGMIEDARKSFEKTAKDSS--ITWNSIMFAYAQHGQGDVALGLFFQMRDKK 501
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
VK D IT++ L+AC+H GLV++ Y + + G++P+ EHYAC VD+ RAG + EA
Sbjct: 502 VKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHYACAVDLFGRAGYLDEA 561
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+ +P P A + LL C G ++LA V L+ELEP + YV LSN+Y
Sbjct: 562 KALIESMPFDPDAMVWKTLLGACRACGDIELAAQVASHLLELEPEEHCTYVILSNMYGHL 621
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
+RWD+ M M VKK PG+S++E+ +H F+A D+ H E+IY +L ++ +
Sbjct: 622 KRWDEKACMARLMRERKVKKVPGWSWIEVKNEVHAFIADDRCHSHFEEIYQILEQLMEDI 681
Query: 420 K 420
K
Sbjct: 682 K 682
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 118/257 (45%), Gaps = 32/257 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G+ PD TF + K AC + ++G +H I K GYE H+Y+
Sbjct: 93 MKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEE---------HVYAG--- 140
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+++LD YAKC + A VF +P ++ +SW+ LI G+V +
Sbjct: 141 -------------------SALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLE 181
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
GD+D A + M G + ++ T +L +H +I + + +
Sbjct: 182 GDHDTAFWLLRCMEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVC 241
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+ + Y++CG++++A VF G + D+ WNSM+ F H + + LF +M G
Sbjct: 242 NATITSYSQCGSLEDAERVF-DGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFG 300
Query: 241 VKPDEITYLNLLSACAH 257
+PD TY ++SAC+H
Sbjct: 301 FEPDIYTYTTIISACSH 317
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 93/181 (51%), Gaps = 4/181 (2%)
Query: 75 NLVSWNSMLDGYAKC--GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEE 132
++ + N++L Y +C G ++ A +FD M +D ++W+ +I GYV G A +++
Sbjct: 33 DIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNSGSLGSAWELYKS 92
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
M+ G P+ T S+L A LD G+ +H ++ + ++L+DMYAKC
Sbjct: 93 MKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHVYAGSALLDMYAKCER 152
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
+++A VF+ + + WN++I GF G + L M GV+ D+ T+ LL
Sbjct: 153 VRDAFMVFKC--IPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLDDGTFSPLL 210
Query: 253 S 253
+
Sbjct: 211 T 211
>27810.m000635 DNA-damage-inducible protein f, putative
Length = 906
Score = 214 bits (546), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 127/393 (32%), Positives = 206/393 (52%), Gaps = 45/393 (11%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML + PD FP KA A + ++G ++HG++ K GY + FV +S + MY
Sbjct: 1 MLLHDIRPDDHIFPSATKACAFWGRCDVGKSVHGFVIKTGYNFNVFVGSSTVDMY----- 55
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AKCG++S AR+VFD MPE++V+SWS +I GY +
Sbjct: 56 --------------------------AKCGELSDARKVFDEMPERNVVSWSGMIYGYAQV 89
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G+ +EAL +F+E + N+ SV+ C L+ GR + + + +
Sbjct: 90 GEDEEALRLFKEALLEDLDVNDFIYSSVIRVCGDSTLLELGRQIQGLCLKTSYDSSSFVG 149
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+SL+ Y++CG ++ A VF +K ++ +WN+M+ A H ++ LF +M VG
Sbjct: 150 SSLISFYSRCGVVEAAFKVFDEVSIK--NLGMWNAMLIACAQHAHTEKVFYLFDKMKNVG 207
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
+KP+ IT+L LL AC+H GL+++ +F+ + + G+ P ++HYA +VD++ RAG++ EA
Sbjct: 208 MKPNFITFLCLLYACSHAGLIEKGQRYFERMKEYGIEPGAQHYATLVDLLGRAGKLQEAL 267
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFR 360
+ +PI PT S+ GA L GC HG +LA ++ EL P V + +
Sbjct: 268 AIIKGMPIDPTESVWGAFLTGCRLHGNTELAAFAADRIFELGP-----------VSSAAQ 316
Query: 361 RWDKARSMREAMERMGVKKSPGYSFVEMHGALH 393
R+ A R+ + GVKK G S++E +LH
Sbjct: 317 RYGDAAKARKMLRDRGVKKETGLSWIE-EASLH 348
>30128.m008920 pentatricopeptide repeat-containing protein, putative
Length = 422
Score = 212 bits (540), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/305 (37%), Positives = 172/305 (56%), Gaps = 33/305 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGY------------------- 41
M+ P+ T+P L KA + G+ +HG++ K G
Sbjct: 120 MVAANARPNKFTYPSLLKACGVATAAKEGVQLHGHVIKQGLTGDVHIRSAGIQMYATLGH 179
Query: 42 ------------ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKC 89
ESD N++I Y F D+ +A+++F+ + +++ SWN M+ G AK
Sbjct: 180 MAAARRMLDEDGESDVICFNAMIDGYYKFGDVDSAKELFEKMEDRSVGSWNVMVSGLAKN 239
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
G + AR++F+ M E+D +SWS +IDGY++ G+Y EAL VF M+ +P + + SVL
Sbjct: 240 GMVKEARELFNDMREKDEISWSSMIDGYIKGGNYKEALEVFNVMQEEKIRPKKFVLSSVL 299
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
ACA+LGALD+GR +H YV N + L VL T+LVDMYAKCG + A VF + MK +
Sbjct: 300 AACANLGALDQGRWIHAYVKKNPMYLDAVLGTALVDMYAKCGRLDMAWDVFET--MKEKE 357
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD 269
VF WN+MI G A HG ++++ LF +M V+ +EIT++ LL+ACAH G+V E D
Sbjct: 358 VFTWNAMICGLAMHGRAEDAIKLFLKMQKEKVRSNEITFVGLLNACAHKGMVDEGLNILD 417
Query: 270 CLGKN 274
+ K+
Sbjct: 418 SMEKD 422
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 156/352 (44%), Gaps = 47/352 (13%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGD 91
IH I ++G+ D +VS +L+ Y++ P+ + +
Sbjct: 48 IHAVILRSGHFEDHYVSGTLLKCYAN----PHFK-------------------------N 78
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
I +A VFD +P+ +V ++ +I + + +A+ + +M + +PN+ T S+L A
Sbjct: 79 IDLAFTVFDHVPKPNVFVYNIIIKACLDNDEPFKAICFYYKMVAANARPNKFTYPSLLKA 138
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVF 211
C A +G +H +VI L + +R++ + MYA G + A + SDV
Sbjct: 139 CGVATAAKEGVQLHGHVIKQGLTGDVHIRSAGIQMYATLGHMAAARRMLDED--GESDVI 196
Query: 212 IWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL 271
+N+MI G+ G V + +LF +M V + ++S A G+VKEA F
Sbjct: 197 CFNAMIDGYYKFGDVDSAKELFEKMEDRSVGSWNV----MVSGLAKNGMVKEARELF--- 249
Query: 272 GKNGMTPKSE-HYACMVDVMARAGQVAEA---YQFLCQIPIQPTASMLGALLNGCMNHGK 327
N M K E ++ M+D + G EA + + + I+P +L ++L C N G
Sbjct: 250 --NDMREKDEISWSSMIDGYIKGGNYKEALEVFNVMQEEKIRPKKFVLSSVLAACANLGA 307
Query: 328 LDLAETVGRKLIELEPHQDGRYVG--LSNVYAIFRRWDKARSMREAMERMGV 377
LD + ++ P +G L ++YA R D A + E M+ V
Sbjct: 308 LDQGRWI-HAYVKKNPMYLDAVLGTALVDMYAKCGRLDMAWDVFETMKEKEV 358
>29596.m000694 pentatricopeptide repeat-containing protein, putative
Length = 687
Score = 211 bits (538), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 218/421 (51%), Gaps = 23/421 (5%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML + P+ T + L LG +H K GY+ + ++NS++++Y
Sbjct: 267 MLLEDIKPNEFTLTTVLSLCCVTLALVLGRLVHSLSIKLGYQYNLRITNSIMYLYLKCGH 326
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A+ +F + NLV+WN+M+ G+A+ D++ D + +
Sbjct: 327 MDEAQILFHKMGSTNLVTWNAMISGHAQAMDLAK--------------------DDFSAQ 366
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
EAL++F E+ +G KP+ T+ SVL C+ L AL +G +H I + +V+
Sbjct: 367 RSGIEALSIFLELNRTGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQTIKSGYLSDVVVG 426
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T+LV+MY+KCG+I +A F M + W +MI G A HG +++L LF +M + G
Sbjct: 427 TALVNMYSKCGSIGKASKAFVE--MSTRTLISWTTMITGLAQHGHSEQALQLFEDMRLAG 484
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
V+P++IT++ +L+AC H G+V EA +F+ + K + P +HY C++ + + ++ EA
Sbjct: 485 VRPNQITFVGVLAACCHSGMVDEALGYFEMMQKEYRIKPVMDHYGCLIAMFVKLRRLDEA 544
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+ + ++ +P+ + L+ GC N GK +L +L++L+ YV L N+Y
Sbjct: 545 FDIINKMDFEPSEFIWSILIAGCRNLGKQELGFYAAEQLLKLKLKDTETYVTLLNMYISA 604
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
+RW +R+ M+ + K +S++ + +H F + HP + ++Y +L ++ +
Sbjct: 605 KRWQDVSRVRKLMKEEKLGKFNDWSWITIKEKIHSFKTTGRLHPHNAKMYELLEELLDKA 664
Query: 420 K 420
K
Sbjct: 665 K 665
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 105/182 (57%), Gaps = 2/182 (1%)
Query: 74 KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM 133
K+L S+++ YAKCG + AR++FD + ++V++W+ L+ GYV+ + A+ VF++M
Sbjct: 107 KDLAVMTSLVNVYAKCGAMGNARKIFDSLHRRNVVAWTALMTGYVQNSQPNIAIDVFQDM 166
Query: 134 RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI 193
SG P+ T+ L AC+ + ++ G+ +H +VI +L + +L +Y+K G++
Sbjct: 167 LESGTLPSNYTLGIALNACSAINSIKLGKQLHAFVIKYKLDYDPSIGNALCSLYSKLGSL 226
Query: 194 QEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
+++VF+S + +V W ++I +G L F+EM + +KP+E T +LS
Sbjct: 227 DSSINVFQS--IGEKNVISWTAVISACGENGKAAMGLRFFNEMLLEDIKPNEFTLTTVLS 284
Query: 254 AC 255
C
Sbjct: 285 LC 286
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 138/337 (40%), Gaps = 45/337 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML G P + T A + + +LG +H ++ K + D + N+L +YS
Sbjct: 166 MLESGTLPSNYTLGIALNACSAINSIKLGKQLHAFVIKYKLDYDPSIGNALCSLYS---- 221
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
K G + + VF + E++V+SW+ +I
Sbjct: 222 ---------------------------KLGSLDSSINVFQSIGEKNVISWTAVISACGEN 254
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G L F EM + KPNE T+ +VL C AL GR++H I L +
Sbjct: 255 GKAAMGLRFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVLGRLVHSLSIKLGYQYNLRIT 314
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGG-----------FACHGLVKES 229
S++ +Y KCG + EA +F M +++ WN+MI G F+ E+
Sbjct: 315 NSIMYLYLKCGHMDEAQILFHK--MGSTNLVTWNAMISGHAQAMDLAKDDFSAQRSGIEA 372
Query: 230 LDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDV 289
L +F E++ G KPD T ++L+ C+ + + K+G +V++
Sbjct: 373 LSIFLELNRTGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQTIKSGYLSDVVVGTALVNM 432
Query: 290 MARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
++ G + +A + ++ + S ++ G HG
Sbjct: 433 YSKCGSIGKASKAFVEMSTRTLISW-TTMITGLAQHG 468
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 118 VRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
++ ++ EAL +E + P + +L C ++ + +++H ++I L
Sbjct: 54 IKPLEFHEALCFIKEEKKIEPS----YYLPLLQECTKKNSVSEAQVIHAHIIKTGTHKDL 109
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
+ TSLV++YAKCGA+ A +F S + +V W +++ G+ + ++D+F +M
Sbjct: 110 AVMTSLVNVYAKCGAMGNARKIFDS--LHRRNVVAWTALMTGYVQNSQPNIAIDVFQDML 167
Query: 238 IVGVKPDEITYLNLLSACA 256
G P T L+AC+
Sbjct: 168 ESGTLPSNYTLGIALNACS 186
>29628.m000765 pentatricopeptide repeat-containing protein, putative
Length = 518
Score = 211 bits (537), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 125/362 (34%), Positives = 188/362 (51%), Gaps = 66/362 (18%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMY----- 55
M+ V P+ TFP L K A + + G H + K G+E D +V NSL+HMY
Sbjct: 147 MIAKWVLPNRYTFPLLVKVCADIGSLKEGQKAHACVVKFGFEFDAYVRNSLLHMYSACGR 206
Query: 56 ---------SSFR-----------------DIPNARKVFDGIPVKNLVSWNSMLDGYAKC 89
S F DI AR++FD +P ++ SWNSM+ GY
Sbjct: 207 VLDARLLFESGFVLDLVSWNSMIIGYVKNGDIGLARELFDEMPERDAFSWNSMISGYVGA 266
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGY-------------------------------V 118
GD+ A+++FD MP +DV+SW+C+IDGY +
Sbjct: 267 GDVEAAKKLFDNMPSRDVVSWNCMIDGYAKIRNVSVARWLFNQMPFRNIVSWNIMLALYL 326
Query: 119 RKGDYDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
+ +Y E L +F+ M +PN+ +++SVL ACA+ LD G+ +H Y+ DNE+
Sbjct: 327 KCKNYGECLKLFDRMIEERELRPNKASLMSVLTACANFRRLDLGKWIHSYIKDNEVESDE 386
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
+L T+L+ MYAKCG + A H+F M V WNSMI G+A +G +++L+ F EM
Sbjct: 387 LLSTALLTMYAKCGMMDFARHIFTK--MPHKSVVSWNSMIMGYAINGHAEKALETFLEME 444
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQV 296
+ P+ T++++LSAC+H L+ E W++FD + K + PK EH CMVD++ +A V
Sbjct: 445 KSSMMPNAATFVSVLSACSHAELLLEGWWYFDLMQRKYKIEPKVEHCGCMVDLLRQAEAV 504
Query: 297 AE 298
E
Sbjct: 505 LE 506
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 114/237 (48%), Gaps = 15/237 (6%)
Query: 130 FEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAK 189
+++M PN T ++ CA +G+L +G+ H V+ +R SL+ MY+
Sbjct: 144 YDKMIAKWVLPNRYTFPLLVKVCADIGSLKEGQKAHACVVKFGFEFDAYVRNSLLHMYSA 203
Query: 190 CGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYL 249
CG + +A +F SG + D+ WNSMI G+ +G + + +LF EM + D ++
Sbjct: 204 CGRVLDARLLFESGFV--LDLVSWNSMIIGYVKNGDIGLARELFDEMP----ERDAFSWN 257
Query: 250 NLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ 309
+++S G V+ A FD + + + CM+D A+ V+ A Q+P +
Sbjct: 258 SMISGYVGAGDVEAAKKLFDNMPSRDVV----SWNCMIDGYAKIRNVSVARWLFNQMPFR 313
Query: 310 PTAS--MLGALLNGCMNHGK-LDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWD 363
S ++ AL C N+G+ L L + + + EL P++ + + A FRR D
Sbjct: 314 NIVSWNIMLALYLKCKNYGECLKLFDRMIEER-ELRPNK-ASLMSVLTACANFRRLD 368
>29799.m000650 pentatricopeptide repeat-containing protein, putative
Length = 757
Score = 211 bits (536), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 121/341 (35%), Positives = 195/341 (57%), Gaps = 5/341 (1%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
N + NS++D YAKC I +A +VF +DV+ WS +I G+ G DEA+AVF++M
Sbjct: 401 NEIVLNSLIDAYAKCNLIELAWEVFSRTRRRDVVLWSTMIAGFAHCGKPDEAIAVFQKMN 460
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
PN VT++++L AC+ L + H I L + + T++VDMY+KCG I+
Sbjct: 461 EGIEVPNAVTIINLLQACSVSAELKRSMWAHGAAIRRGLAAEVAVGTAIVDMYSKCGEIE 520
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
+ F + ++ W++MI + +GL E+L L ++M +KP+ +TYL++L+A
Sbjct: 521 ASRKAFNQ--IPQKNIITWSTMIAAYGMNGLAHEALALLAQMKSHEIKPNALTYLSVLTA 578
Query: 255 CAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP--IQPT 311
C+HGGLV+ F + ++ G+ P+ EHY+CMVD+++RAG++ +A + + +P +
Sbjct: 579 CSHGGLVEMGLSVFKSMIQDHGVDPEFEHYSCMVDMLSRAGKLDDAMELIRMMPETFRAG 638
Query: 312 ASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREA 371
AS+ GALL+ C + L E +++ELEP Y+ S++YA WD A M+
Sbjct: 639 ASVWGALLSACRTYRSSTLGEKAVYQVLELEPLNLAGYLLASSMYASDGLWDNAARMKLL 698
Query: 372 MERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML 412
GV+ GYS V + H+FVA DKS + I+ ML
Sbjct: 699 ARERGVRAVAGYSIVHVDSKAHKFVAGDKSCSQAGNIHHML 739
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 139/302 (46%), Gaps = 33/302 (10%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
+ PD + + KA A + +G +HG G +SD FV NSLI MYS +D +A
Sbjct: 262 ITPDGVILVSVLKACANSVNITMGRLVHGLTICRGLDSDLFVKNSLIDMYSKCKDAGSAF 321
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
+VF +P +N VSWNS+L G + Y E
Sbjct: 322 EVFSEMPRRNNVSWNSLL-------------------------------SGLILNKKYSE 350
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
AL + MR G + +EVT+V+ L C + + +H I ++ SL+D
Sbjct: 351 ALLLVYSMRTEGIEADEVTLVNCLQICKYFAHPYHCKAVHCATIRRGCESNEIVLNSLID 410
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
YAKC I+ A VF + DV +W++MI GFA G E++ +F +M+ P+
Sbjct: 411 AYAKCNLIELAWEVFSR--TRRRDVVLWSTMIAGFAHCGKPDEAIAVFQKMNEGIEVPNA 468
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQ 305
+T +NLL AC+ +K + + + G+ + +VD+ ++ G++ + + Q
Sbjct: 469 VTIINLLQACSVSAELKRSMWAHGAAIRRGLAAEVAVGTAIVDMYSKCGEIEASRKAFNQ 528
Query: 306 IP 307
IP
Sbjct: 529 IP 530
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 122/249 (48%), Gaps = 5/249 (2%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
NS+L+ Y KCG++ A VFD M +D +SW+ LI G + G E L F RV+G +
Sbjct: 103 NSILNFYIKCGELDTAVSVFDSMRSRDSVSWNVLIHGCLDYGALVEGLWQFINARVAGFE 162
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
PN T+V ++ AC L A +G +H Y+I + L + ++ S + MYA + A +
Sbjct: 163 PNISTLVLLVQACRSLRAKQEGLQLHGYLIQSGLWASWSVQNSFLCMYADVD-MDCARIL 221
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIVGVKPDEITYLNLLSACAHG 258
F M DV W++MIGG+ + + L +F +M + PD + +++L ACA+
Sbjct: 222 FDE--MPEKDVISWSAMIGGYVQYLEDQIGLQIFQKMLSTSRITPDGVILVSVLKACANS 279
Query: 259 GLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGAL 318
+ G+ ++D+ ++ A++ ++P + S +L
Sbjct: 280 VNITMGRLVHGLTICRGLDSDLFVKNSLIDMYSKCKDAGSAFEVFSEMPRRNNVSW-NSL 338
Query: 319 LNGCMNHGK 327
L+G + + K
Sbjct: 339 LSGLILNKK 347
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 6/164 (3%)
Query: 95 ARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN--EVTMVS-VLCA 151
A + +LSW+ I + E ++ + E+ +G + +VT+ VL A
Sbjct: 15 ASMAMRFLSTSRLLSWTLRIKELSSNEKWHEVISQYYEITNAGISHHLLDVTLFPPVLKA 74
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVF 211
C++L +D G+ +H +I + S+++ Y KCG + A+ VF S M+ D
Sbjct: 75 CSYLSYID-GKCLHACLIKTAFDSFTSIGNSILNFYIKCGELDTAVSVFDS--MRSRDSV 131
Query: 212 IWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC 255
WN +I G +G + E L F + G +P+ T + L+ AC
Sbjct: 132 SWNVLIHGCLDYGALVEGLWQFINARVAGFEPNISTLVLLVQAC 175
>29736.m002044 pentatricopeptide repeat-containing protein, putative
Length = 327
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/242 (45%), Positives = 158/242 (65%), Gaps = 2/242 (0%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ PD+ TF FL +A A LL +E+GLA+HG + K G+ D V + LI MY+ +
Sbjct: 79 GISPDNYTFNFLIRACAQLLAKEIGLAVHGCVIKYGFGLDPHVQSGLIFMYAELGCLGFC 138
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
R+VFD IP +LV +M+ +KCGD+ AR++FD MP +D ++WS +I GY + G
Sbjct: 139 RQVFDLIPQPDLVCQTAMVSACSKCGDVGFARELFDSMPHRDHIAWSAMIAGYAQCGQSR 198
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
EALA+F M++ K +EV+MVSVL A + LGALD GR H Y+ N++P+T+ L T+LV
Sbjct: 199 EALALFHLMQLEDVKVSEVSMVSVLSASSQLGALDNGRWAHAYIERNKIPVTVTLGTALV 258
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
DMYAKCG + +A+ VF + MK +V+ W+S I G A +G + L+LFS M GV P+
Sbjct: 259 DMYAKCGDMNKAMEVFWA--MKEKNVYTWSSAIYGLAMNGAGHKCLELFSLMKKDGVLPN 316
Query: 245 EI 246
E+
Sbjct: 317 EL 318
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 102/244 (41%), Gaps = 35/244 (14%)
Query: 91 DISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVS--GPKPNEVTMVSV 148
++ + Q+ D + V + + +I + + ++ F + S G P+ T +
Sbjct: 31 NVDYSNQILDQCNDPTVFALNSMIRAHSKGSKPQKSFYFFNRIIHSHNGISPDNYTFNFL 90
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLT-------------------------------L 177
+ ACA L A + G +H VI L L
Sbjct: 91 IRACAQLLAKEIGLAVHGCVIKYGFGLDPHVQSGLIFMYAELGCLGFCRQVFDLIPQPDL 150
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
V +T++V +KCG + A +F S M D W++MI G+A G +E+L LF M
Sbjct: 151 VCQTAMVSACSKCGDVGFARELFDS--MPHRDHIAWSAMIAGYAQCGQSREALALFHLMQ 208
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVA 297
+ VK E++ +++LSA + G + + + +N + +VD+ A+ G +
Sbjct: 209 LEDVKVSEVSMVSVLSASSQLGALDNGRWAHAYIERNKIPVTVTLGTALVDMYAKCGDMN 268
Query: 298 EAYQ 301
+A +
Sbjct: 269 KAME 272
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
+ IPV + +++D YAKCGD++ A +VF M E++V +WS I G G + L
Sbjct: 245 NKIPV-TVTLGTALVDMYAKCGDMNKAMEVFWAMKEKNVYTWSSAIYGLAMNGAGHKCLE 303
Query: 129 VFEEMRVSGPKPNEVTM 145
+F M+ G PNE+ M
Sbjct: 304 LFSLMKKDGVLPNELRM 320
>28320.m001094 pentatricopeptide repeat-containing protein, putative
Length = 486
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/341 (34%), Positives = 197/341 (57%), Gaps = 4/341 (1%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G P+ T+PF+ K+ A + G IHG I K G+++D FV SLI MY +
Sbjct: 115 MISSGFTPNTYTYPFVLKSCARISSTHEGKQIHGQILKLGFDNDAFVHTSLITMYVQNGE 174
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ NAR VF+ ++++VS+ +++ GYA G + A ++FD +P +DV+SW+ +I GY +
Sbjct: 175 LGNARLVFERSSMRDVVSYTALITGYASRGFLDQALELFDEIPVRDVVSWNAMIAGYTQS 234
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G ++EAL FEEM + PN T++SVL ACA G+L G + ++ ++ L + +
Sbjct: 235 GRFEEALIFFEEMLRANVTPNMSTLLSVLSACAQSGSLKMGNWVSSWIEEHGLESNIKVM 294
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+DMYAKCG ++ ALH+F +K +V WN MIGG+ KE+L LF +M
Sbjct: 295 NALIDMYAKCGDLENALHLFEG--IKNKNVISWNVMIGGYTHLSCYKEALGLFRQMLQSN 352
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMT-PKSEHYACMVDVMARAGQVAEA 299
V+P+++T L++L ACA+ G + + + KN + + ++D+ A+ G + A
Sbjct: 353 VEPNDVTLLSILPACANLGALGLGKWIHAYIDKNMKNLANNALWTSLIDMYAKCGNIEVA 412
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
Q + + AS A+++G HG+ DLA ++ ++ +
Sbjct: 413 NQIFDGMNPKSLASW-NAMISGFAMHGQADLAISLFSRMTK 452
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 139/262 (53%), Gaps = 34/262 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
MLR V P+ T + A A ++G + +I + G ES+ V N+LI MY
Sbjct: 247 MLRANVTPNMSTLLSVLSACAQSGSLKMGNWVSSWIEEHGLESNIKVMNALIDMY----- 301
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AKCGD+ A +F+ + ++V+SW+ +I GY
Sbjct: 302 --------------------------AKCGDLENALHLFEGIKNKNVISWNVMIGGYTHL 335
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL-TLVL 179
Y EAL +F +M S +PN+VT++S+L ACA+LGAL G+ +H Y+ N L L
Sbjct: 336 SCYKEALGLFRQMLQSNVEPNDVTLLSILPACANLGALGLGKWIHAYIDKNMKNLANNAL 395
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
TSL+DMYAKCG I+ A +F M P + WN+MI GFA HG ++ LFS M
Sbjct: 396 WTSLIDMYAKCGNIEVANQIFDG--MNPKSLASWNAMISGFAMHGQADLAISLFSRMTKE 453
Query: 240 GVKPDEITYLNLLSACAHGGLV 261
G+ PD IT++ +LSAC H GL+
Sbjct: 454 GLVPDNITFIGVLSACNHAGLL 475
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 30/168 (17%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML+ V P+ +T + A A L LG IH YI K +N+L
Sbjct: 348 MLQSNVEPNDVTLLSILPACANLGALGLGKWIHAYIDK---NMKNLANNAL--------- 395
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
W S++D YAKCG+I +A Q+FD M + + SW+ +I G+
Sbjct: 396 ------------------WTSLIDMYAKCGNIEVANQIFDGMNPKSLASWNAMISGFAMH 437
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
G D A+++F M G P+ +T + VL AC H G LD G + H ++
Sbjct: 438 GQADLAISLFSRMTKEGLVPDNITFIGVLSACNHAGLLDLGHINHFHI 485
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 126/319 (39%), Gaps = 63/319 (19%)
Query: 12 TFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIH--MYSSFRDIPNARKVFD 69
T P L S C + L IH + K G + F + LI + S + D+ A +F
Sbjct: 24 THPSLTLLSTCKNLKTLK-QIHSQVIKTGLHNTHFALSKLIEFCVISPYGDLSYALLLFK 82
Query: 70 GIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAV 129
I N + WN+++ G + + E +L A+
Sbjct: 83 SIGKPNQIIWNNIIRGLS--------------LSESPIL-----------------AIQY 111
Query: 130 FEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAK 189
+ +M SG PN T VL +CA + + +G+ +H ++ + TSL+ MY +
Sbjct: 112 YVDMISSGFTPNTYTYPFVLKSCARISSTHEGKQIHGQILKLGFDNDAFVHTSLITMYVQ 171
Query: 190 CGAIQEALHVFRSGLMKP-----------------------------SDVFIWNSMIGGF 220
G + A VF M+ DV WN+MI G+
Sbjct: 172 NGELGNARLVFERSSMRDVVSYTALITGYASRGFLDQALELFDEIPVRDVVSWNAMIAGY 231
Query: 221 ACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKS 280
G +E+L F EM V P+ T L++LSACA G +K + + ++G+
Sbjct: 232 TQSGRFEEALIFFEEMLRANVTPNMSTLLSVLSACAQSGSLKMGNWVSSWIEEHGLESNI 291
Query: 281 EHYACMVDVMARAGQVAEA 299
+ ++D+ A+ G + A
Sbjct: 292 KVMNALIDMYAKCGDLENA 310
>28098.m000126 pentatricopeptide repeat-containing protein, putative
Length = 726
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 187/326 (57%), Gaps = 7/326 (2%)
Query: 81 SMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKP 140
S+LD YAKCG++ + Q+F +P + +W ++ G ++ G +DEA+ +F +M+ SG +
Sbjct: 368 SLLDFYAKCGELRNSVQLFGEIPCRSSSTWKLMMSGCIQNGYFDEAIHLFRQMQASGVQL 427
Query: 141 NEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL----TLVLRTSLVDMYAKCGAIQEA 196
+ S++ AC+HLG+L + +H Y+ N + + L TS+++MY +CG+I A
Sbjct: 428 QAQILGSLVDACSHLGSLQLCKEIHGYLTRNFFYILEGDNIHLGTSILNMYIRCGSISSA 487
Query: 197 LHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
F M D W SMI G+ HG+ E+L LF++M + V P+ +T+L+LLSAC+
Sbjct: 488 REYFNR--MVAKDNITWTSMIEGYGIHGMAIEALKLFNQMLVERVLPNRVTFLSLLSACS 545
Query: 257 HGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASML 315
H GL+++ F + GM P +HY CMVD++ R G++ EA + ++ + + +
Sbjct: 546 HSGLIRQGCELFLSMKWVFGMEPDLDHYTCMVDLLGRCGKIKEALAMIIRMVVVADSRIW 605
Query: 316 GALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERM 375
GAL+ C HG + E ++L+E+E G Y LSN+ A+ +WD+ +R+ +
Sbjct: 606 GALVASCRVHGDKKVGEFAAQRLLEMESDNVGYYTLLSNIQAMVGKWDEVEQVRKVIHEK 665
Query: 376 GVKKSPGYSFVEMHGALHRFVAHDKS 401
++K+PG+S + G + F++ S
Sbjct: 666 DLRKTPGWSCIVGKGRNYCFISEGLS 691
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 139/260 (53%), Gaps = 8/260 (3%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N+M++ YA+CG + R +FD M +D++SW+ +I GYV +G+ A +F +MR+ +
Sbjct: 168 NTMIEVYARCGCVYYGRVMFDEMSPRDLVSWTSMISGYVSEGNVFSAFELFNKMRLE-ME 226
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
PN VT++ +L C +GR +H Y+I N L + ++ S++ MY+ G+ +E +
Sbjct: 227 PNSVTLIVMLKGCYAYDNFSEGRQLHCYIIKNGLLIYGSVQNSILRMYSITGSAKEVESL 286
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH-IVGVKPDEITYLNLLSACAHG 258
F + DV WN++IG +A G +E + F++M V + + +T ++S A
Sbjct: 287 FVE--IYRRDVISWNTLIGFYALRGDAEEMVCGFNQMRGEVALSSETLTL--VISVFAKI 342
Query: 259 GLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGAL 318
G + E K G+ A ++D A+ G++ + Q +IP + ++S +
Sbjct: 343 GNLVEGEKLHSFSIKVGLCDDV-LLASLLDFYAKCGELRNSVQLFGEIPCR-SSSTWKLM 400
Query: 319 LNGCMNHGKLDLAETVGRKL 338
++GC+ +G D A + R++
Sbjct: 401 MSGCIQNGYFDEAIHLFRQM 420
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 8/193 (4%)
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
R F + N+ S+L+ Y +CG IS AR+ F+ M +D ++W+ +I+GY G
Sbjct: 456 TRNFFYILEGDNIHLGTSILNMYIRCGSISSAREYFNRMVAKDNITWTSMIEGYGIHGMA 515
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG---RMMHHYVIDNELPLTLVLR 180
EAL +F +M V PN VT +S+L AC+H G + +G + +V E L
Sbjct: 516 IEALKLFNQMLVERVLPNRVTFLSLLSACSHSGLIRQGCELFLSMKWVFGMEPDLDHY-- 573
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T +VD+ +CG I+EAL + ++ +D IW +++ HG + + F+ ++
Sbjct: 574 TCMVDLLGRCGKIKEALAMIIR-MVVVADSRIWGALVASCRVHG--DKKVGEFAAQRLLE 630
Query: 241 VKPDEITYLNLLS 253
++ D + Y LLS
Sbjct: 631 MESDNVGYYTLLS 643
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 96/185 (51%), Gaps = 10/185 (5%)
Query: 72 PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFE 131
P L+S+ Y+K D+ A VF L+ E + LSW+ ++ ++ G EAL +++
Sbjct: 64 PSTKLISF------YSKFNDLESAISVFSLLQEPNTLSWNLIMRTHLDFGLVTEALLLYK 117
Query: 132 EMRVSGPKPNEVTMVSVLCACAHLGA-LDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
+MR SG K + T ++ A L + + G+M+H + L +++++YA+C
Sbjct: 118 KMRESGVKTDAFTFPTINRAVMSLKSDVLLGKMVHCDAMKLGFGYDLYFCNTMIEVYARC 177
Query: 191 GAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLN 250
G + +F M P D+ W SMI G+ G V + +LF++M + ++P+ +T +
Sbjct: 178 GCVYYGRVMFDE--MSPRDLVSWTSMISGYVSEGNVFSAFELFNKMRL-EMEPNSVTLIV 234
Query: 251 LLSAC 255
+L C
Sbjct: 235 MLKGC 239
>29635.m000454 pentatricopeptide repeat-containing protein, putative
Length = 487
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/336 (36%), Positives = 195/336 (58%), Gaps = 8/336 (2%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + GV D + F + A + E+G HG + K G+ + V N+++++Y R
Sbjct: 121 MRKRGVILDDVAFVCVFSLCARVGNLEMGRQAHGCVVKMGFGINVKVCNAVMNVYVKCRL 180
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A+ VF + +++VSW ++L+G + + VFD MPE++ + W+ +I GYV
Sbjct: 181 MGEAKGVFSEMGERDIVSWTALLEGVVNWEGVENGKVVFDQMPERNEVGWTIMISGYVGS 240
Query: 121 GDYDEALAVFEEMRVSGPK--PNEVTMVSVLCACAHLGALDKGRMMHHYVIDN-ELPLTL 177
G E + EM V G + N VT+ S+L ACA G + GR +H Y + + +
Sbjct: 241 GFCKEGFLLLSEM-VLGLRLELNYVTLCSILSACAQSGDVVMGRWVHVYALKKMGREIDM 299
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
++ T+L+DMYAKCG I+ A VF+ + +V WN+++GG A HG + L +F +M
Sbjct: 300 MVGTALIDMYAKCGRIKMAYEVFK--YLPRRNVVAWNAILGGLAMHGKGRIVLVIFPKM- 356
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQV 296
I KPD++T++ +LSAC+H GLV + +F L + G+TPK EHYAC+VD++ RAG++
Sbjct: 357 IQETKPDDLTFIAVLSACSHSGLVDQGCQYFHILESEYGITPKIEHYACVVDLLGRAGRL 416
Query: 297 AEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAE 332
EA + ++P+ P +LG+LL C HGKL L +
Sbjct: 417 EEAEMLIKKMPMPPNEFVLGSLLGSCYVHGKLQLGK 452
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 134/310 (43%), Gaps = 41/310 (13%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPE--QDVLSWSCLIDGYVRKGDYDE-ALAVFEEMRVS 136
N++L Y++CG A +FD +P +D W+ L+ + A ++FEEMR
Sbjct: 65 NALLHLYSQCGITRYAHHLFDQIPNSHKDTADWTSLLSCLAKHTSTPRNAFSLFEEMRKR 124
Query: 137 GPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEA 196
G ++V V V CA +G L+ GR H V+ + + + +++++Y KC + EA
Sbjct: 125 GVILDDVAFVCVFSLCARVGNLEMGRQAHGCVVKMGFGINVKVCNAVMNVYVKCRLMGEA 184
Query: 197 LHVFRSGLMKPSDVFIWNS-------------------------------MIGGFACHGL 225
VF M D+ W + MI G+ G
Sbjct: 185 KGVFSE--MGERDIVSWTALLEGVVNWEGVENGKVVFDQMPERNEVGWTIMISGYVGSGF 242
Query: 226 VKESLDLFSEMHIVGVK--PDEITYLNLLSACAHGG-LVKEAWYFFDCLGKNGMTPKSEH 282
KE L SEM ++G++ + +T ++LSACA G +V W L K G
Sbjct: 243 CKEGFLLLSEM-VLGLRLELNYVTLCSILSACAQSGDVVMGRWVHVYALKKMGREIDMMV 301
Query: 283 YACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELE 342
++D+ A+ G++ AY+ +P + + A+L G HGK + + K+I+
Sbjct: 302 GTALIDMYAKCGRIKMAYEVFKYLPRRNVVAW-NAILGGLAMHGKGRIVLVIFPKMIQET 360
Query: 343 PHQDGRYVGL 352
D ++ +
Sbjct: 361 KPDDLTFIAV 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 4/181 (2%)
Query: 147 SVLCACAHLGALDKGRMMHHYVIDNELPLT--LVLRTSLVDMYAKCGAIQEALHVFRSGL 204
S+L +CA +L G+ +H ++ + + L +L+ +Y++CG + A H+F
Sbjct: 29 SLLRSCARESSLSTGKKLHAILLTTGVATSPNAFLLNALLHLYSQCGITRYAHHLFDQIP 88
Query: 205 MKPSDVFIWNSMIGGFACH-GLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKE 263
D W S++ A H + + LF EM GV D++ ++ + S CA G ++
Sbjct: 89 NSHKDTADWTSLLSCLAKHTSTPRNAFSLFEEMRKRGVILDDVAFVCVFSLCARVGNLEM 148
Query: 264 AWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCM 323
C+ K G + +++V + + EA ++ + S ALL G +
Sbjct: 149 GRQAHGCVVKMGFGINVKVCNAVMNVYVKCRLMGEAKGVFSEMGERDIVSWT-ALLEGVV 207
Query: 324 N 324
N
Sbjct: 208 N 208
>29676.m001697 pentatricopeptide repeat-containing protein, putative
Length = 472
Score = 208 bits (529), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 111/269 (41%), Positives = 155/269 (57%), Gaps = 2/269 (0%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M +G D T L + LG +H YI G + D N+LI MY+
Sbjct: 180 MREIGTEADDFTLVNLLLVCSRRCDINLGRFVHLYIQITGMKIDLVARNALIDMYAKCGA 239
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A +VF +P KN+VSW SM+ YAK G + AR+ FD MPE++V+SW+ +I YV+
Sbjct: 240 LVLAERVFQQMPNKNVVSWTSMITAYAKQGLVEYARKSFDQMPEKNVVSWNSMISSYVQG 299
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G EAL +F EM PNE T++SVL AC +G L G+ +H+Y+ ++ L
Sbjct: 300 GQCREALDLFHEMHSFRVVPNEATLLSVLSACGQIGDLVMGKKIHNYICGTSSMYSVTLC 359
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
SL+DMYAKCGA++ A+ VF M ++ WN +IG A HG E+++LF +M G
Sbjct: 360 NSLIDMYAKCGALRIAIDVFNE--MPNKNLVSWNVIIGALALHGYGVEAVELFRKMQAAG 417
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFD 269
V PDEIT++ LLSAC+H GLV Y+FD
Sbjct: 418 VWPDEITFMGLLSACSHSGLVDSGLYYFD 446
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 165/359 (45%), Gaps = 81/359 (22%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
++ G+ P+ TFPF+ KA A + + +HG+ K G+ S V N LI
Sbjct: 79 LIDSGLSPNEFTFPFVLKACASKSAHWMSMIVHGHAQKLGFASLICVQNGLI-------- 130
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ Y CG I AR++FD M E+ ++SW+ +I GY +
Sbjct: 131 -----------------------NAYIACGFIRYARKMFDDMSERSLVSWNSMIGGYSKL 167
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G E +F+EMR G + ++ T+V++L C+ ++ GR +H Y+ + + LV R
Sbjct: 168 GWCKEVFLLFKEMREIGTEADDFTLVNLLLVCSRRCDINLGRFVHLYIQITGMKIDLVAR 227
Query: 181 TSLVDMYAKCGAIQEALHVF-------------------RSGL----------MKPSDVF 211
+L+DMYAKCGA+ A VF + GL M +V
Sbjct: 228 NALIDMYAKCGALVLAERVFQQMPNKNVVSWTSMITAYAKQGLVEYARKSFDQMPEKNVV 287
Query: 212 IWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH-GGLVKEAWYFFDC 270
WNSMI + G +E+LDLF EMH V P+E T L++LSAC G LV
Sbjct: 288 SWNSMISSYVQGGQCREALDLFHEMHSFRVVPNEATLLSVLSACGQIGDLV--------- 338
Query: 271 LGK---NGMTPKSEHYAC-----MVDVMARAGQVAEAYQFLCQIPIQPTAS---MLGAL 318
+GK N + S Y+ ++D+ A+ G + A ++P + S ++GAL
Sbjct: 339 MGKKIHNYICGTSSMYSVTLCNSLIDMYAKCGALRIAIDVFNEMPNKNLVSWNVIIGAL 397
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 6/243 (2%)
Query: 71 IPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVF 130
+ + LVS+ ++ D G++ A VF+ + + ++ LI GY +++ ++
Sbjct: 21 LTLGKLVSFCAVSDA----GNLDYAHLVFNQISIPNKFMYNSLIRGYCNSNSPIKSMFLY 76
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
++ SG PNE T VL ACA A ++H + + ++ L++ Y C
Sbjct: 77 RQLIDSGLSPNEFTFPFVLKACASKSAHWMSMIVHGHAQKLGFASLICVQNGLINAYIAC 136
Query: 191 GAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLN 250
G I+ A +F M + WNSMIGG++ G KE LF EM +G + D+ T +N
Sbjct: 137 GFIRYARKMFDD--MSERSLVSWNSMIGGYSKLGWCKEVFLLFKEMREIGTEADDFTLVN 194
Query: 251 LLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQP 310
LL C+ + + + GM ++D+ A+ G + A + Q+P +
Sbjct: 195 LLLVCSRRCDINLGRFVHLYIQITGMKIDLVARNALIDMYAKCGALVLAERVFQQMPNKN 254
Query: 311 TAS 313
S
Sbjct: 255 VVS 257
>29742.m001368 pentatricopeptide repeat-containing protein, putative
Length = 353
Score = 207 bits (527), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 101/257 (39%), Positives = 161/257 (62%), Gaps = 1/257 (0%)
Query: 12 TFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGI 71
TF FL A A +H + K+G+ESD +L+ MY + A +VFD I
Sbjct: 84 TFTFLFAACASFFSPLHAQMLHTHFKKSGFESDVIALTALVDMYCKLGMVAFAHRVFDEI 143
Query: 72 PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFE 131
PV+++ +WN+++ GY++CGD+ A ++F LMP+++V+SW+ +I GY + G Y +AL +F
Sbjct: 144 PVRDIPTWNALIAGYSRCGDMEGALKIFKLMPDRNVVSWTAMISGYSQNGRYAKALELFL 203
Query: 132 EM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
+M + +G +PNEVT+ S+L ACA+LGAL+ G + Y +N L L + +L++MYA+C
Sbjct: 204 KMEKENGLRPNEVTIASILPACANLGALEVGDRIETYARENGLLRNLYVSNALLEMYARC 263
Query: 191 GAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLN 250
G I A VF + K ++ WNSMI G A HG ++L L++ M I G+ PD++T++
Sbjct: 264 GKIDMARKVFDKIIGKRRNLCSWNSMIMGLAIHGRSHDALHLYNRMLIEGIAPDDVTFVG 323
Query: 251 LLSACAHGGLVKEAWYF 267
+L AC HGG++ + F
Sbjct: 324 ILLACTHGGMLNSSALF 340
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 142/325 (43%), Gaps = 37/325 (11%)
Query: 63 NARKVFDGIPVKNLVSWNSML-DGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKG 121
N K ++N + +N L + + ++ A ++ DL+P +V ++ LI Y +
Sbjct: 2 NQLKQIHAYTLRNGIDYNKTLTERLIQIPNVPYAHKLIDLIPSPNVFLYNKLIQAYSFQN 61
Query: 122 DYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRT 181
+ +++ +MR N+ T + ACA + +M+H + + ++ T
Sbjct: 62 QLHQCFSIYSQMRSRNCTGNQHTFTFLFAACASFFSPLHAQMLHTHFKKSGFESDVIALT 121
Query: 182 SLVDMYAK-------------------------------CGAIQEALHVFRSGLMKPSDV 210
+LVDMY K CG ++ AL +F+ LM +V
Sbjct: 122 ALVDMYCKLGMVAFAHRVFDEIPVRDIPTWNALIAGYSRCGDMEGALKIFK--LMPDRNV 179
Query: 211 FIWNSMIGGFACHGLVKESLDLFSEMHIV-GVKPDEITYLNLLSACAHGGLVKEAWYFFD 269
W +MI G++ +G ++L+LF +M G++P+E+T ++L ACA+ G ++
Sbjct: 180 VSWTAMISGYSQNGRYAKALELFLKMEKENGLRPNEVTIASILPACANLGALEVGDRIET 239
Query: 270 CLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQ-IPIQPTASMLGALLNGCMNHGKL 328
+NG+ ++++ AR G++ A + + I + +++ G HG+
Sbjct: 240 YARENGLLRNLYVSNALLEMYARCGKIDMARKVFDKIIGKRRNLCSWNSMIMGLAIHGRS 299
Query: 329 -DLAETVGRKLIELEPHQDGRYVGL 352
D R LIE D +VG+
Sbjct: 300 HDALHLYNRMLIEGIAPDDVTFVGI 324
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 71/161 (44%), Gaps = 33/161 (20%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ P+ +T + A A L E+G I Y + G + +VSN+L+ MY+ I A
Sbjct: 210 GLRPNEVTIASILPACANLGALEVGDRIETYARENGLLRNLYVSNALLEMYARCGKIDMA 269
Query: 65 RKVFDGI--PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
RKVFD I +NL SWNSM+ G A G
Sbjct: 270 RKVFDKIIGKRRNLCSWNSMIMGLAI-------------------------------HGR 298
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRM 163
+AL ++ M + G P++VT V +L AC H G L+ +
Sbjct: 299 SHDALHLYNRMLIEGIAPDDVTFVGILLACTHGGMLNSSAL 339
>30131.m007153 pentatricopeptide repeat-containing protein, putative
Length = 349
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/373 (32%), Positives = 203/373 (54%), Gaps = 43/373 (11%)
Query: 28 LGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYA 87
G IH ++ K+G+ S FV ++LI +YS +A VFD IPVKN V N++L GY
Sbjct: 6 FGEQIHAHVIKSGWLSSVFVGSALIDLYSKLSFPSDAATVFDEIPVKNTVCANALLSGYI 65
Query: 88 KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
+ + Q +L+ E LS DYD T+ +
Sbjct: 66 EA---KLWYQGVELIKEMPFLSL-----------DYD-----------------NFTLSA 94
Query: 148 VLCACAHLGALDKGRMMHHYVIDN--ELPLTLVLRTSLVDMYAKCGAIQEALHV-----F 200
+L A L A++ G+ +H Y+I ++ + +++SL++MY KCG + +AL V F
Sbjct: 95 MLRISAGLSAIEFGKQVHAYLIRKIYDVENDVFMQSSLIEMYGKCGYVGKALQVLNFAGF 154
Query: 201 RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGL 260
R G + D+ +W SM+G + +G +E + LF EM GV+PD + Y+ ++SAC H G
Sbjct: 155 RPGRKRNKDIVLWTSMLGVYGRNGHFEEVISLFEEMLKEGVRPDGVAYVTVISACGHTGQ 214
Query: 261 VKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQP----TASML 315
V+ +F+ + ++ +TP EHY+C+VD+ RAG++ A++ + ++ + + SM
Sbjct: 215 VQLGIEYFESMSRDFNLTPSPEHYSCVVDLFCRAGELDRAWKLVNEMLTKGHEIHSISMW 274
Query: 316 GALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERM 375
GA+L+ C HG ++ + R+ ++LEP G YV LSN+YA F WD+ +R+ M+
Sbjct: 275 GAVLSACEEHGNIEFGKLAAREALKLEPQNVGIYVMLSNLYARFGMWDEIDHLRKIMKDR 334
Query: 376 GVKKSPGYSFVEM 388
G+KK G S++E+
Sbjct: 335 GLKKDVGCSWIEI 347
>29841.m002890 pentatricopeptide repeat-containing protein, putative
Length = 512
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/287 (36%), Positives = 168/287 (58%), Gaps = 10/287 (3%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + V P +T + A + L E G +H YI+ +S+ V N+LI MY++ +
Sbjct: 180 MEKKRVLPSSVTLVSVLSACSKLKDLESGQKVHKYISDHVVQSNLIVENALIDMYAACGE 239
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A +F+ + ++++SW +++ G+A G + +AR+ FD MPE+D +SW+ +IDGY++
Sbjct: 240 MSVALGIFESMKSRDVISWTAIVTGFANIGQLDIARKYFDQMPERDYVSWTAMIDGYLQV 299
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+ EAL +F EM+ S KP+E TMVS+L ACA LGAL+ G + Y+ N++ +
Sbjct: 300 NCFKEALVLFHEMQTSNVKPDEFTMVSILTACAQLGALELGEWVRTYIDKNKVKNDAYVG 359
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+DMY KCG +++A +F S M D F W +MI G A +G +E+LD+F +M
Sbjct: 360 NALIDMYFKCGNVEKARSIFNS--MPRPDKFTWTAMIVGLAINGYGEEALDMFVQMLKAS 417
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMV 287
V PDEITY+ +L AC H G+V E G+N + H C +
Sbjct: 418 VTPDEITYVGVLCACTHTGMVDE--------GRNLLYEDPGHSGCQL 456
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 165/356 (46%), Gaps = 68/356 (19%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML+ V PD T+PFL K + E G +H ++ K G S+ FV N+LI+MYS
Sbjct: 79 MLKNDVLPDCYTYPFLIKGFKKDIAFEYGKELHCHVVKYGLGSNVFVQNALINMYSL--- 135
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
CG MAR +FD+ + DV++W+ +I Y R
Sbjct: 136 ----------------------------CGLTDMARGIFDMSYKTDVVTWNAMISAYNRI 167
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
YD+ +F EM P+ VT+VSVL AC+ L L+ G+ +H Y+ D+ + L++
Sbjct: 168 KQYDKTKTLFHEMEKKRVLPSSVTLVSVLSACSKLKDLESGQKVHKYISDHVVQSNLIVE 227
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLV-------------- 226
+L+DMYA CG + AL +F S MK DV W +++ GFA G +
Sbjct: 228 NALIDMYAACGEMSVALGIFES--MKSRDVISWTAIVTGFANIGQLDIARKYFDQMPERD 285
Query: 227 -----------------KESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD 269
KE+L LF EM VKPDE T +++L+ACA G ++ +
Sbjct: 286 YVSWTAMIDGYLQVNCFKEALVLFHEMQTSNVKPDEFTMVSILTACAQLGALELGEWVRT 345
Query: 270 CLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP----IQPTASMLGALLNG 321
+ KN + + ++D+ + G V +A +P TA ++G +NG
Sbjct: 346 YIDKNKVKNDAYVGNALIDMYFKCGNVEKARSIFNSMPRPDKFTWTAMIVGLAING 401
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 126/261 (48%), Gaps = 15/261 (5%)
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
GD++ ARQ+FD +PE V W+ ++ GY R ++++ +M + P+ T ++
Sbjct: 36 GDMNYARQLFDTIPEPTVFHWNTMLKGYSRIDSPKLGVSMYLDMLKNDVLPDCYTYPFLI 95
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
A + G+ +H +V+ L + ++ +L++MY+ CG A +F + +D
Sbjct: 96 KGFKKDIAFEYGKELHCHVVKYGLGSNVFVQNALINMYSLCGLTDMARGIF--DMSYKTD 153
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW---- 265
V WN+MI + ++ LF EM V P +T +++LSAC+ ++
Sbjct: 154 VVTWNAMISAYNRIKQYDKTKTLFHEMEKKRVLPSSVTLVSVLSACSKLKDLESGQKVHK 213
Query: 266 YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNH 325
Y D + ++ + ++ ++D+ A G+++ A + + S A++ G N
Sbjct: 214 YISDHVVQSNLIVEN----ALIDMYAACGEMSVALGIFESMKSRDVIS-WTAIVTGFANI 268
Query: 326 GKLDLAETVGRKLIELEPHQD 346
G+LD+A RK + P +D
Sbjct: 269 GQLDIA----RKYFDQMPERD 285
>29634.m002120 pentatricopeptide repeat-containing protein, putative
Length = 338
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 97/219 (44%), Positives = 149/219 (68%), Gaps = 2/219 (0%)
Query: 12 TFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGI 71
TFPFL KA + L E +H I K G+ SD + +NSL+H Y++ I +AR +FD I
Sbjct: 113 TFPFLLKACSSLSAIEKAQQVHAQIIKLGFGSDVYTTNSLLHAYAASGFIESARIIFDRI 172
Query: 72 PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFE 131
P + VSWNS++DGY KCG+ A ++F MPE++ +S++ +I G+V+ G EAL +F+
Sbjct: 173 PHPDTVSWNSIIDGYVKCGETETAYELFKDMPEKNAISFTVMISGHVQAGLDKEALDLFQ 232
Query: 132 EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG 191
EM+++G KP+++ + +VL ACAHLGALD+GR +H Y+ N++ + +L +L DMYAKCG
Sbjct: 233 EMQIAGIKPDKIVLTNVLSACAHLGALDQGRWIHTYIKKNDVQIDPMLGCALTDMYAKCG 292
Query: 192 AIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESL 230
++Q+AL VF+ + V +W ++I GFA HG +E+L
Sbjct: 293 SMQDALEVFKK--TRKKSVSLWTALIHGFAIHGRGREAL 329
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 124/271 (45%), Gaps = 37/271 (13%)
Query: 90 GDISMARQVFD-LMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
G+++ A+ VFD L + W+ ++ GY +EAL ++ +M N T +
Sbjct: 58 GNLTYAKIVFDSLSSRPNTYIWNAMLRGYADSNKPEEALILYHQMLCHSVPHNGYTFPFL 117
Query: 149 LCACAHLGALDKGRMMHHYVID----------NEL----------------------PLT 176
L AC+ L A++K + +H +I N L P T
Sbjct: 118 LKACSSLSAIEKAQQVHAQIIKLGFGSDVYTTNSLLHAYAASGFIESARIIFDRIPHPDT 177
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
V S++D Y KCG + A +F+ M + + MI G GL KE+LDLF EM
Sbjct: 178 -VSWNSIIDGYVKCGETETAYELFKD--MPEKNAISFTVMISGHVQAGLDKEALDLFQEM 234
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQV 296
I G+KPD+I N+LSACAH G + + + + KN + + D+ A+ G +
Sbjct: 235 QIAGIKPDKIVLTNVLSACAHLGALDQGRWIHTYIKKNDVQIDPMLGCALTDMYAKCGSM 294
Query: 297 AEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
+A + + + + S+ AL++G HG+
Sbjct: 295 QDALEVFKKTR-KKSVSLWTALIHGFAIHGR 324
>30147.m014093 pentatricopeptide repeat-containing protein, putative
Length = 434
Score = 203 bits (516), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 108/332 (32%), Positives = 187/332 (56%), Gaps = 3/332 (0%)
Query: 12 TFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGI 71
T P + KA + LL ++G +H I G + + +V SL+ Y+ ++ +ARK+FDGI
Sbjct: 98 TGPPVIKACSSLLAIDVGKQVHSLIVICGIDCNVYVQTSLMDFYAKIGELGSARKIFDGI 157
Query: 72 PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFE 131
VK+ +S+N ++ GY+K GD+ AR++FD M E+ V+SW+ +I Y GD +E L FE
Sbjct: 158 LVKDPISYNCLITGYSKAGDVIAARRLFDSMTERTVVSWNAMISCYAHNGDLNEGLKTFE 217
Query: 132 EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG 191
M+ PNE+T+V++L CA LG L+ G + Y+ DN L + +++ T++++MY KCG
Sbjct: 218 RMQAEDISPNEITLVTLLSICAKLGDLEMGLRIKKYIEDNNLCVNMIVSTAILEMYVKCG 277
Query: 192 AIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
A+ +A F M D+ W++MI G+A +G E+L+LF M VKP+++T +++
Sbjct: 278 AVDDARKEFDR--MGQRDIVAWSAMIAGYAQNGRSNEALELFECMRREKVKPNDVTLVSV 335
Query: 252 LSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPT 311
LSAC G V+ Y + + + +V + ++ G +++A + + P Q
Sbjct: 336 LSACVQLGSVEMGNYIGSYVESQDLASNVYVASALVGMYSKCGNISKAREVFGKTP-QKD 394
Query: 312 ASMLGALLNGCMNHGKLDLAETVGRKLIELEP 343
+++ G +G A + R + E +P
Sbjct: 395 IVTWNSMIVGLAVNGFAKDAIALYRNMKEADP 426
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 115/231 (49%), Gaps = 33/231 (14%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
+ P+ +T L A L E+GL I YI + VS +++ MY + +AR
Sbjct: 224 ISPNEITLVTLLSICAKLGDLEMGLRIKKYIEDNNLCVNMIVSTAILEMYVKCGAVDDAR 283
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
K FD + +++V+W++M+ GYA+ G +E
Sbjct: 284 KEFDRMGQRDIVAWSAMIAGYAQ-------------------------------NGRSNE 312
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
AL +FE MR KPN+VT+VSVL AC LG+++ G + YV +L + + ++LV
Sbjct: 313 ALELFECMRREKVKPNDVTLVSVLSACVQLGSVEMGNYIGSYVESQDLASNVYVASALVG 372
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
MY+KCG I +A VF G D+ WNSMI G A +G K+++ L+ M
Sbjct: 373 MYSKCGNISKAREVF--GKTPQKDIVTWNSMIVGLAVNGFAKDAIALYRNM 421
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 165/404 (40%), Gaps = 78/404 (19%)
Query: 50 SLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLS 109
+LI + S I +++ I +K+ ++ DI ARQ+FD +P+ +
Sbjct: 4 TLITLLHSPLQINQLKQIHSLIIIKHPSLATVLVRKLLNLSDIDYARQLFDQVPQPGQIL 63
Query: 110 WSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI 169
++ LI Y + + +AL F M S + + T V+ AC+ L A+D G+ +H ++
Sbjct: 64 YNSLISTYSKLSLHKDALKTFFSMHHSDTRLSCFTGPPVIKACSSLLAIDVGKQVHSLIV 123
Query: 170 DNELPLTLVLRTSLVDMYAKCGAIQEALHVFR--------------SGLMKPSDVFI--- 212
+ + ++TSL+D YAK G + A +F +G K DV
Sbjct: 124 ICGIDCNVYVQTSLMDFYAKIGELGSARKIFDGILVKDPISYNCLITGYSKAGDVIAARR 183
Query: 213 ------------WNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA---- 256
WN+MI +A +G + E L F M + P+EIT + LLS CA
Sbjct: 184 LFDSMTERTVVSWNAMISCYAHNGDLNEGLKTFERMQAEDISPNEITLVTLLSICAKLGD 243
Query: 257 -------------------------------HGGLVKEAWYFFDCLGKNGMTPKSEHYAC 285
G V +A FD +G+ + ++
Sbjct: 244 LEMGLRIKKYIEDNNLCVNMIVSTAILEMYVKCGAVDDARKEFDRMGQRDIVA----WSA 299
Query: 286 MVDVMARAGQVAEAYQ-FLC--QIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELE 342
M+ A+ G+ EA + F C + ++P L ++L+ C+ G +++ +G +E +
Sbjct: 300 MIAGYAQNGRSNEALELFECMRREKVKPNDVTLVSVLSACVQLGSVEMGNYIG-SYVESQ 358
Query: 343 PHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFV 386
YV A+ + K ++ +A E G K+P V
Sbjct: 359 DLASNVYVA----SALVGMYSKCGNISKAREVFG--KTPQKDIV 396
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R V P+ +T + A L E+G I Y+ S+ +V+++L+ MYS +
Sbjct: 320 MRREKVKPNDVTLVSVLSACVQLGSVEMGNYIGSYVESQDLASNVYVASALVGMYSKCGN 379
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQD 106
I AR+VF P K++V+WNSM+ G A G A ++ M E D
Sbjct: 380 ISKAREVFGKTPQKDIVTWNSMIVGLAVNGFAKDAIALYRNMKEAD 425
>29970.m001006 pentatricopeptide repeat-containing protein, putative
Length = 417
Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/261 (39%), Positives = 165/261 (63%), Gaps = 6/261 (2%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML V P+ TF + K+ C L E IH K G +SD +V L+ +Y+ D
Sbjct: 123 MLTQKVTPNAFTFSSILKS--CPL--EFAQIIHAQAIKFGLDSDLYVRTCLVDVYARGGD 178
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+AR +FD IP K+LVS +M+ +AK G + AR +FD + ++D++ W+ +IDGYV+
Sbjct: 179 FVSARNLFDEIPEKSLVSSTAMITCFAKHGMVKEARVLFDGLEDRDLVCWNVMIDGYVQH 238
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +E L +F +M +P+EVT+++VL AC +GAL+ GR +H Y+ +N + + +
Sbjct: 239 GLANEGLVLFRQMLKDRVRPSEVTVLAVLSACGQIGALESGRWVHSYIQNNGIEINAHVG 298
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
++L+DMY+KCG +++A VF +K DV +WNSM+ G+A HG +++L LF+EM +G
Sbjct: 299 SALIDMYSKCGNLEDARLVFER--IKYKDVVVWNSMVTGYATHGFSQDALQLFNEMCGLG 356
Query: 241 VKPDEITYLNLLSACAHGGLV 261
+P +IT++ +LSAC H GLV
Sbjct: 357 YQPTDITFIGVLSACGHAGLV 377
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 120/271 (44%), Gaps = 34/271 (12%)
Query: 85 GYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVT 144
Y+ G ++ + +F+ +V ++ +I + + +AL + +M PN T
Sbjct: 75 SYSSLGHLNHSLTLFNQTQNPNVFFYTSIIHAHTFHKLHYQALLFYAQMLTQKVTPNAFT 134
Query: 145 MVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF---- 200
S+L +C L+ +++H I L L +RT LVD+YA+ G A ++F
Sbjct: 135 FSSILKSCP----LEFAQIIHAQAIKFGLDSDLYVRTCLVDVYARGGDFVSARNLFDEIP 190
Query: 201 ---------------RSGLMKPS----------DVFIWNSMIGGFACHGLVKESLDLFSE 235
+ G++K + D+ WN MI G+ HGL E L LF +
Sbjct: 191 EKSLVSSTAMITCFAKHGMVKEARVLFDGLEDRDLVCWNVMIDGYVQHGLANEGLVLFRQ 250
Query: 236 MHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQ 295
M V+P E+T L +LSAC G ++ + + NG+ + + ++D+ ++ G
Sbjct: 251 MLKDRVRPSEVTVLAVLSACGQIGALESGRWVHSYIQNNGIEINAHVGSALIDMYSKCGN 310
Query: 296 VAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
+ +A +I + + +++ G HG
Sbjct: 311 LEDARLVFERIKYKDVV-VWNSMVTGYATHG 340
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 74/163 (45%), Gaps = 35/163 (21%)
Query: 1 MLRVGVFPDHLTFPFLAKASAC--LLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSF 58
ML+ V P +T LA SAC + E G +H YI G E + V ++LI MYS
Sbjct: 251 MLKDRVRPSEVTV--LAVLSACGQIGALESGRWVHSYIQNNGIEINAHVGSALIDMYS-- 306
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
KCG++ AR VF+ + +DV+ W+ ++ GY
Sbjct: 307 -----------------------------KCGNLEDARLVFERIKYKDVVVWNSMVTGYA 337
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
G +AL +F EM G +P ++T + VL AC H G + K
Sbjct: 338 THGFSQDALQLFNEMCGLGYQPTDITFIGVLSACGHAGLVGKN 380
>29751.m001893 pentatricopeptide repeat-containing protein, putative
Length = 606
Score = 200 bits (509), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 206/389 (52%), Gaps = 36/389 (9%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSS-FR 59
M+R+G+ +++T+ L + + + +H I + G E + +++ +L+ +YS
Sbjct: 251 MMRLGIKANYVTYNSLLSSFSGPKYMQYCKQVHCSIIRCGLECNLYIAATLVTVYSKCTN 310
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
++ + K+ G+ + + +SWN+ +I GY
Sbjct: 311 NLEDFNKISSGVQLSDQISWNA-------------------------------VIAGYSN 339
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
G ++AL F EMR + K + T S+L A A+++GR MH ++ ++ +
Sbjct: 340 LGLGEDALKCFCEMRHANIKMDFYTFTSLLGAIGAFLAIEEGREMHALIVKTGYASSVYV 399
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+ LV MYA+CGAI ++ VF LM+ DV WN+++ G A HG E+++LF +M
Sbjct: 400 QNGLVSMYARCGAIDDSKRVF--WLMEDHDVVSWNALLTGCAHHGFGNEAVELFEQMRKT 457
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTP-KSEHYACMVDVMARAGQVA 297
+KP+ T+L +LSAC+H G V + +FD + + + P + EHYA +VD+ RAG ++
Sbjct: 458 KIKPNSTTFLAVLSACSHVGSVDKGLEYFDFMRSDISLEPLRVEHYASVVDIFGRAGYLS 517
Query: 298 EAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYA 357
EA + +P+ P S+ ALL+ C+ HG ++A RKL+EL P Y+ LSN+ A
Sbjct: 518 EAEAIINCMPMDPGPSVYKALLSACLVHGNREIAVRSARKLLELWPDDPATYILLSNMLA 577
Query: 358 IFRRWDKARSMREAMERMGVKKSPGYSFV 386
WD A +R+ M GV+K+PGYS++
Sbjct: 578 TEGYWDDAADVRKLMCDRGVRKNPGYSWI 606
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 134/301 (44%), Gaps = 33/301 (10%)
Query: 26 RELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDG 85
R G +HG K G++++ FV +LI MYS
Sbjct: 175 RNFGAQVHGLSLKLGFDNNVFVGTALIDMYS----------------------------- 205
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
KC + + +VFD M +++V++W+ ++ Y + DEA+ + EM G K N VT
Sbjct: 206 --KCDGVDDSWRVFDYMVDKNVVTWTAMVTAYAQNEQPDEAMILVREMMRLGIKANYVTY 263
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
S+L + + + + +H +I L L + +LV +Y+KC E + SG+
Sbjct: 264 NSLLSSFSGPKYMQYCKQVHCSIIRCGLECNLYIAATLVTVYSKCTNNLEDFNKISSGV- 322
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
+ SD WN++I G++ GL +++L F EM +K D T+ +LL A ++E
Sbjct: 323 QLSDQISWNAVIAGYSNLGLGEDALKCFCEMRHANIKMDFYTFTSLLGAIGAFLAIEEGR 382
Query: 266 YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNH 325
+ K G +V + AR G + ++ + + S ALL GC +H
Sbjct: 383 EMHALIVKTGYASSVYVQNGLVSMYARCGAIDDSKRVFWLMEDHDVVSW-NALLTGCAHH 441
Query: 326 G 326
G
Sbjct: 442 G 442
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 114/254 (44%), Gaps = 44/254 (17%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+LR G F + + A +LG+ +H I + G+ S+ +H+ S+
Sbjct: 60 LLRNGSFSNPYFINKVVSFCAKFASYDLGIQLHSTIIRMGFTSN-------VHICSA--- 109
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
++D YAKC +I A +VF+ MPE++ ++W+ LI GY
Sbjct: 110 ---------------------VVDMYAKCSEIQSAHEVFNEMPERNDVTWNSLIFGY--- 145
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
L V + G V+ + L C+ L + G +H + + +
Sbjct: 146 ------LNVMPTCAMRGVTSFSVS--TCLVVCSQLEVRNFGAQVHGLSLKLGFDNNVFVG 197
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T+L+DMY+KC + ++ VF M +V W +M+ +A + E++ L EM +G
Sbjct: 198 TALIDMYSKCDGVDDSWRVF--DYMVDKNVVTWTAMVTAYAQNEQPDEAMILVREMMRLG 255
Query: 241 VKPDEITYLNLLSA 254
+K + +TY +LLS+
Sbjct: 256 IKANYVTYNSLLSS 269
>29904.m002919 pentatricopeptide repeat-containing protein, putative
Length = 404
Score = 199 bits (505), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 103/280 (36%), Positives = 155/280 (55%), Gaps = 37/280 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+LR + PDHLTF F+ K+ A L + L A+HG I + G E D FV S++ +Y +
Sbjct: 124 LLRSDIKPDHLTFSFVLKSIASLSLKGLARALHGMILRCGLEFDSFVRISMVDVYVKLEE 183
Query: 61 IPNARKVFD-----------------------------------GIPVKNLVSWNSMLDG 85
+ A KVFD +P++N SWNS+++G
Sbjct: 184 VKLALKVFDESPQRFHEGSTLLWNVLINGCCKVGDMRKALELFEDMPLRNTASWNSLING 243
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
+ K GD+ A + FD MP +DV+SW+ +++G+ + GD+++AL+VF M KPN+ T+
Sbjct: 244 FFKIGDLEQAIEHFDRMPVKDVVSWTTMVNGFSQNGDHEKALSVFSRMLDEDVKPNDFTI 303
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
VS L ACA +GAL+ G +H Y+ DN L + +LVDM+AKCG I A VF+
Sbjct: 304 VSALSACAKIGALEAGLRIHKYLKDNGFRLNRAVGNALVDMHAKCGNINSASQVFKEA-- 361
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
K D+ W+ MI G+A HG +E++ F +M G++PDE
Sbjct: 362 KEKDIITWSVMIWGWAIHGHFEEAIQCFKQMMYAGIQPDE 401
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 109/243 (44%), Gaps = 13/243 (5%)
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
I+ + +F+ +++ ++ LI G Y +++ F + S KP+ +T VL +
Sbjct: 83 IAYSLSIFNSYHPKNLYLFNALIRGLTDNYRYLDSIDHFILLLRSDIKPDHLTFSFVLKS 142
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSD 209
A L R +H ++ L +R S+VD+Y K ++ AL VF +
Sbjct: 143 IASLSLKGLARALHGMILRCGLEFDSFVRISMVDVYVKLEEVKLALKVFDESPQRFHEGS 202
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD 269
+WN +I G G ++++L+LF +M + + ++ +L++ G +++A FD
Sbjct: 203 TLLWNVLINGCCKVGDMRKALELFEDMPL----RNTASWNSLINGFFKIGDLEQAIEHFD 258
Query: 270 CLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI---PIQPTASMLGALLNGCMNHG 326
+ + + MV+ ++ G +A ++ ++P + + L+ C G
Sbjct: 259 RMPVKDVVS----WTTMVNGFSQNGDHEKALSVFSRMLDEDVKPNDFTIVSALSACAKIG 314
Query: 327 KLD 329
L+
Sbjct: 315 ALE 317
>28256.m000142 pentatricopeptide repeat-containing protein, putative
Length = 631
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 204/431 (47%), Gaps = 78/431 (18%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R+G PD + + L ELG +H Y K ESD F+ N LI M
Sbjct: 234 MTRLGRRPDGFVCTSILTSCGSLEALELGRQVHAYSIKGNVESDIFLQNGLIDM------ 287
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
YAKCG ++ AR+VFD M ++V+S++ LI+GY
Sbjct: 288 -------------------------YAKCGSLNDARKVFDDMTIRNVVSYNALIEGYSTL 322
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
EA+ +F EMR P+ +T VS+L A A L AL+ G+ +H + + + +
Sbjct: 323 EQLSEAMNLFREMRHGMLSPSFLTFVSLLGASATLSALELGKQIHALITKFGISMEIFAG 382
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
++L+D Y+KC + +A VF M D+ +WN+M+ G+ +E+L L++E+ I
Sbjct: 383 SALIDFYSKCSCLMDARLVFDK--MTEKDIVVWNAMLFGYTQQLENEEALKLYTELQISE 440
Query: 241 VKPDEITYLNLLSACA------HG------------------------------------ 258
KP+ +T+ L +A + HG
Sbjct: 441 PKPNVVTFAALTTAASNLASLQHGQQFHNHIIKTGLDSHPFTTNSLIDMYAKCGSLEDAR 500
Query: 259 ---GLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASML 315
G VK+ ++F+ + K + P +EHYAC+V ++ R+G++ EA +F+ ++P +P A +
Sbjct: 501 KAFGHVKDGLHYFESMPKFSIKPGTEHYACVVSLLGRSGKLYEAKEFIEKMPTEPEAVVW 560
Query: 316 GALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERM 375
+LL+ C G ++L + K I ++ G Y LSN+YA W + +RE M+
Sbjct: 561 RSLLSACRVSGNVELGKYAAEKAISIDSTDSGSYTLLSNIYASKGMWVDVKKVRERMDIA 620
Query: 376 GVKKSPGYSFV 386
GV K G+S++
Sbjct: 621 GVVKEAGHSWI 631
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 134/243 (55%), Gaps = 8/243 (3%)
Query: 20 SACLLK--RELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNL- 76
+AC+ + E+ L + + + D ++ +S++ S + +++ + + +
Sbjct: 115 TACVKRGRSEVSLQLFSQMRETNVVPDGYILSSVLGACSQLEFVQGGKQIHGHVLRRGIE 174
Query: 77 --VSW-NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM 133
VS+ N ++D Y K G + AR++FD M +++V+SW+ +I GY++ EA+ +F EM
Sbjct: 175 IDVSFVNVLIDFYTKSGKVQSARKLFDGMADRNVISWTAMIAGYMQNSFDREAVKLFIEM 234
Query: 134 RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI 193
G +P+ S+L +C L AL+ GR +H Y I + + L+ L+DMYAKCG++
Sbjct: 235 TRLGRRPDGFVCTSILTSCGSLEALELGRQVHAYSIKGNVESDIFLQNGLIDMYAKCGSL 294
Query: 194 QEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
+A VF M +V +N++I G++ + E+++LF EM + P +T+++LL
Sbjct: 295 NDARKVFDD--MTIRNVVSYNALIEGYSTLEQLSEAMNLFREMRHGMLSPSFLTFVSLLG 352
Query: 254 ACA 256
A A
Sbjct: 353 ASA 355
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 101/183 (55%), Gaps = 2/183 (1%)
Query: 74 KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM 133
+N+ S++D YAK G+I AR VFD + E+ ++W+ +I V++G + +L +F +M
Sbjct: 74 RNVYVGTSLVDLYAKGGNIDEARLVFDGLLEKSAVTWTTIITACVKRGRSEVSLQLFSQM 133
Query: 134 RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI 193
R + P+ + SVL AC+ L + G+ +H +V+ + + + L+D Y K G +
Sbjct: 134 RETNVVPDGYILSSVLGACSQLEFVQGGKQIHGHVLRRGIEIDVSFVNVLIDFYTKSGKV 193
Query: 194 QEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
Q A +F M +V W +MI G+ + +E++ LF EM +G +PD ++L+
Sbjct: 194 QSARKLFDG--MADRNVISWTAMIAGYMQNSFDREAVKLFIEMTRLGRRPDGFVCTSILT 251
Query: 254 ACA 256
+C
Sbjct: 252 SCG 254
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 6/204 (2%)
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHL-GALD 159
MPE++++SWS ++ Y ++G +EAL VF + R PNE + SV+ AC + G++D
Sbjct: 1 MPERNLISWSSVVSMYSKRGFSEEALLVFLDFKRCCNENPNEYILASVISACVQVGGSID 60
Query: 160 KGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGG 219
K MH + + + + + TSLVD+YAK G I EA VF GL++ S V W ++I
Sbjct: 61 K--QMHGFAVKSGFDRNVYVGTSLVDLYAKGGNIDEARLVF-DGLLEKSAV-TWTTIITA 116
Query: 220 FACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPK 279
G + SL LFS+M V PD ++L AC+ V+ + + G+
Sbjct: 117 CVKRGRSEVSLQLFSQMRETNVVPDGYILSSVLGACSQLEFVQGGKQIHGHVLRRGIEID 176
Query: 280 SEHYACMVDVMARAGQVAEAYQFL 303
++D ++G+V A +
Sbjct: 177 VSFVNVLIDFYTKSGKVQSARKLF 200
>29598.m000467 pentatricopeptide repeat-containing protein, putative
Length = 313
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/307 (36%), Positives = 174/307 (56%), Gaps = 20/307 (6%)
Query: 102 MPEQDVLSWSCLIDGYV--RKGDYDEALA---VFEEM--RVSGPKPNEVTMVSVLCACAH 154
M ++ V++W+ +I G+ R+ D A+A +F +M V KPN++TMVSVL A +
Sbjct: 1 MSKRSVVTWNAMITGFSSQREKAKDSAVAALMLFRDMVVDVCAEKPNDITMVSVLSASSQ 60
Query: 155 LGALDKGRMMHHYVIDNE-LPLT-LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFI 212
LG L+ G +H Y+ +P + + T LVDMY+KCG + A+ F MK +
Sbjct: 61 LGVLECGACIHGYIEKTICVPQNDIFIGTGLVDMYSKCGCLDSAVKFFVE--MKLKNKLT 118
Query: 213 WNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL- 271
W +M G A HG KE+L+L M G+KP+ +T+ +L SAC H GLV+E + F +
Sbjct: 119 WTAMATGLAIHGKGKETLELLDGMGASGIKPNAVTFTSLFSACCHSGLVEEGLHLFHNMK 178
Query: 272 GKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
GK G+ P +HY C+VD++ + G + EAY+F+ +P++P A + LL+ C HG + +
Sbjct: 179 GKFGIEPGIQHYGCIVDLLGKGGHLKEAYEFIAGMPMEPDAILWRCLLSACKVHGDVVMG 238
Query: 332 ETVGRKLIELEPHQDG--------RYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGY 383
E V + L+ L+P ++ YV LSNVYA RW+ +R+ M+ ++ PG
Sbjct: 239 EKVAKILLHLQPEKNSVESDDSSEDYVALSNVYASAERWEDVEILRKEMKVKRLETKPGA 298
Query: 384 SFVEMHG 390
S V+ G
Sbjct: 299 SLVQAIG 305
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 31/220 (14%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P+ +T + AS+ L E G IHGYI K
Sbjct: 46 PNDITMVSVLSASSQLGVLECGACIHGYIEKTIC-------------------------- 79
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
+P ++ ++D Y+KCG + A + F M ++ L+W+ + G G E L
Sbjct: 80 ---VPQNDIFIGTGLVDMYSKCGCLDSAVKFFVEMKLKNKLTWTAMATGLAIHGKGKETL 136
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN-ELPLTLVLRTSLVDM 186
+ + M SG KPN VT S+ AC H G +++G + H + + + +VD+
Sbjct: 137 ELLDGMGASGIKPNAVTFTSLFSACCHSGLVEEGLHLFHNMKGKFGIEPGIQHYGCIVDL 196
Query: 187 YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLV 226
K G ++EA + F +G+ D +W ++ HG V
Sbjct: 197 LGKGGHLKEA-YEFIAGMPMEPDAILWRCLLSACKVHGDV 235
>29889.m003395 pentatricopeptide repeat-containing protein, putative
Length = 396
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 96/258 (37%), Positives = 154/258 (59%), Gaps = 2/258 (0%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML+ VFP+ TFP + +A +LG IH ++ K G+ + N+LIHMY+ F+
Sbjct: 135 MLQHSVFPNDFTFPSVIRACCIHDDIQLGKQIHAHVLKLGFGAHVISLNNLIHMYARFQA 194
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AR V +P +N +SW +++ GY++ G + A +VF MPE++ SW+ +I YV+
Sbjct: 195 FEEARCVLYSMPEQNFISWTTLISGYSQWGLVDEAFRVFQSMPERNSASWNAMIAAYVQG 254
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+ E+ A+F+ MR G ++ ++L AC LGAL++G+ +H Y+ + L
Sbjct: 255 NRFHESFALFDRMRAEGVVLDKFVAATMLSACTGLGALEQGKWIHGYIEKKGIEKDSKLA 314
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T+++DMY KCG++++AL VF+ + + WN MIGG A HG + +++LF EM
Sbjct: 315 TAIIDMYCKCGSLEKALEVFKG--LPHKGISSWNCMIGGLAMHGKGEAAIELFKEMEKEM 372
Query: 241 VKPDEITYLNLLSACAHG 258
+ PD IT++NLLSACAH
Sbjct: 373 LAPDRITFVNLLSACAHS 390
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 115/272 (42%), Gaps = 34/272 (12%)
Query: 91 DISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLC 150
D++ A ++FD +P D ++ +I Y++ ++ ++ M PN+ T SV+
Sbjct: 93 DLAYAIKLFDSIPNPDAFFYNTIIKAYLQHLSPTNSILLYSHMLQHSVFPNDFTFPSVIR 152
Query: 151 ACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDV 210
AC + G+ +H +V+ ++ +L+ MYA+ A +EA V S M +
Sbjct: 153 ACCIHDDIQLGKQIHAHVLKLGFGAHVISLNNLIHMYARFQAFEEARCVLYS--MPEQNF 210
Query: 211 FIWNSMIGGFACHGLVK-------------------------------ESLDLFSEMHIV 239
W ++I G++ GLV ES LF M
Sbjct: 211 ISWTTLISGYSQWGLVDEAFRVFQSMPERNSASWNAMIAAYVQGNRFHESFALFDRMRAE 270
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
GV D+ +LSAC G +++ + + K G+ S+ ++D+ + G + +A
Sbjct: 271 GVVLDKFVAATMLSACTGLGALEQGKWIHGYIEKKGIEKDSKLATAIIDMYCKCGSLEKA 330
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
+ +P + +S ++ G HGK + A
Sbjct: 331 LEVFKGLPHKGISSW-NCMIGGLAMHGKGEAA 361
>30170.m014235 pentatricopeptide repeat-containing protein, putative
Length = 742
Score = 194 bits (494), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 119/419 (28%), Positives = 204/419 (48%), Gaps = 36/419 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M V V D TF + K + G +H TK G S V N+LI MYS D
Sbjct: 348 MREVLVALDEFTFATVLKVCSHPNFNFTGRQLHALTTKTGMGSIVTVGNALITMYSKCGD 407
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
A VF +PV+N++SW SM+ +++ G A+ F+ MPE++V++W+ +I Y++
Sbjct: 408 TQKADCVFKMMPVRNIISWTSMITAFSQAGYFRKAQACFNKMPERNVITWNSMISMYIQH 467
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G + L ++ M+ P+++T + + ACA L L G + + +
Sbjct: 468 GFQEWGLKLYVRMQRERIAPDDITFATSISACADLAMLKLGNQIVAQAEKLGFGSDVSVA 527
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
SLV MY++CG I+EA F L+ ++ WNSMI G+A +G + ++++F M +
Sbjct: 528 NSLVTMYSRCGQIEEARKAF--DLVSMKNLVSWNSMIAGYAQNGHGRVAIEVFKNMLEME 585
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
PD I+YL++LS D++ RAG + +A
Sbjct: 586 YIPDHISYLSVLS----------------------------------DLLGRAGLLEQAK 611
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFR 360
+ +P P + GALL C H LAE + EL+ G Y L+++Y+
Sbjct: 612 NLIDDMPFTPNGDVWGALLGACKIHCNSKLAEYAVKNSQELDVDNSGSYALLAHIYSSRG 671
Query: 361 RWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
+ +R+ ++ G++KSPGYS++E++ +H F + +HP ++I+ M+ I++ +
Sbjct: 672 NLEGVADLRKLIKEKGIQKSPGYSWIEVNNEVHVFAIDETNHPLIKEIHAMIDVILNTL 730
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 144/303 (47%), Gaps = 2/303 (0%)
Query: 11 LTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDG 70
L+F KA L +L + +HG K + SD+ + S++ MY A +VF G
Sbjct: 125 LSFSCAMKACGALGCFKLAIQLHGLFEKFDFGSDKSIETSVMGMYIKCGAFTYADRVFLG 184
Query: 71 IPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVF 130
I +L +NSML Y+ + A +F+ +PE+D +SWS +I R G L++F
Sbjct: 185 IRQPSLFCFNSMLYCYSNSYGVGKALDLFNRIPERDSVSWSTIISILSRHGFGVPTLSMF 244
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
EM G +PN +T VL AC + L+ G +H +I E+ L + LV MYAKC
Sbjct: 245 IEMWTQGFRPNSMTFACVLSACTSIHDLEWGAHLHARIIRKEIILDDYVGNGLVYMYAKC 304
Query: 191 GAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLN 250
G ++ A VF S + + W S+I G A GL +E+L LF++M V V DE T+
Sbjct: 305 GHLKFARRVFNS--LTEHNAVSWTSLINGVARCGLKEEALLLFNKMREVLVALDEFTFAT 362
Query: 251 LLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQP 310
+L C+H K GM ++ + ++ G +A +P++
Sbjct: 363 VLKVCSHPNFNFTGRQLHALTTKTGMGSIVTVGNALITMYSKCGDTQKADCVFKMMPVRN 422
Query: 311 TAS 313
S
Sbjct: 423 IIS 425
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 152/371 (40%), Gaps = 61/371 (16%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G P+ +TF + A + E G +H I + D +V N L++MY
Sbjct: 247 MWTQGFRPNSMTFACVLSACTSIHDLEWGAHLHARIIRKEIILDDYVGNGLVYMY----- 301
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AKCG + AR+VF+ + E + +SW+ LI+G R
Sbjct: 302 --------------------------AKCGHLKFARRVFNSLTEHNAVSWTSLINGVARC 335
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +EAL +F +MR +E T +VL C+H GR +H + + +
Sbjct: 336 GLKEEALLLFNKMREVLVALDEFTFATVLKVCSHPNFNFTGRQLHALTTKTGMGSIVTVG 395
Query: 181 TSLVDMYAKCGAIQEALHVFRS-----------------------------GLMKPSDVF 211
+L+ MY+KCG Q+A VF+ M +V
Sbjct: 396 NALITMYSKCGDTQKADCVFKMMPVRNIISWTSMITAFSQAGYFRKAQACFNKMPERNVI 455
Query: 212 IWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL 271
WNSMI + HG + L L+ M + PD+IT+ +SACA ++K
Sbjct: 456 TWNSMISMYIQHGFQEWGLKLYVRMQRERIAPDDITFATSISACADLAMLKLGNQIVAQA 515
Query: 272 GKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
K G +V + +R GQ+ EA + + ++ S +++ G +G +A
Sbjct: 516 EKLGFGSDVSVANSLVTMYSRCGQIEEARKAFDLVSMKNLVS-WNSMIAGYAQNGHGRVA 574
Query: 332 ETVGRKLIELE 342
V + ++E+E
Sbjct: 575 IEVFKNMLEME 585
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 129/258 (50%), Gaps = 7/258 (2%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGD 91
+H + G F+ N L++MY + +A +VF + +N+ S+N+M+ G +K
Sbjct: 13 LHAQLISTGLYISIFLHNHLLNMYLNCHLTHDACRVFADMTFRNVFSYNTMITGLSKAEQ 72
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM-RVSGPKPNEVTMVSVLC 150
I A++VFD MPE+D +SW+ ++ GY R G Y+E + VF M R N ++ +
Sbjct: 73 IDKAKKVFDEMPERDSVSWNSMMSGYFRNGKYEEVVKVFVLMIRNFTCIVNLLSFSCAMK 132
Query: 151 ACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDV 210
AC LG +H + + TS++ MY KCGA A VF G+ +PS +
Sbjct: 133 ACGALGCFKLAIQLHGLFEKFDFGSDKSIETSVMGMYIKCGAFTYADRVFL-GIRQPS-L 190
Query: 211 FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDC 270
F +NSM+ ++ V ++LDLF+ + + D +++ ++S + G F
Sbjct: 191 FCFNSMLYCYSNSYGVGKALDLFNRIP----ERDSVSWSTIISILSRHGFGVPTLSMFIE 246
Query: 271 LGKNGMTPKSEHYACMVD 288
+ G P S +AC++
Sbjct: 247 MWTQGFRPNSMTFACVLS 264
>28619.m000046 pentatricopeptide repeat-containing protein, putative
Length = 458
Score = 194 bits (493), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 208/421 (49%), Gaps = 36/421 (8%)
Query: 3 RVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIP 62
R V PD +F A L + G +IH I K + V N LI MY +
Sbjct: 36 RSDVCPDAYSFTVALSACGQLSMLQFGRSIHCKIVKCSSDCGVVVGNCLIDMYGKCASVK 95
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLS------------- 109
A VFD + K+++SWNS++ A+ G + +A F MPE D +S
Sbjct: 96 EATWVFDKLIDKDIISWNSVIAACARNGRLELAYNFFCQMPELDTISYNEVINGIAQFGN 155
Query: 110 ------------------WSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
W+ +I YV + EAL F +M S K +E T +L
Sbjct: 156 IEDAIAILLNMPHSNSSSWNSVITAYVNRNQAREALEFFTKMHSSDIKKDEYTYSVILSG 215
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVF 211
A A G ++H I ++V+ ++L+DMY+KCG ++ A +F+S + ++
Sbjct: 216 VAGAAAWKWGMLIHCCAIKGGWDTSVVVGSALIDMYSKCGQVKSAESMFQS--LPVRNLI 273
Query: 212 IWNSMIGGFACHGLVKESLDLFSEMHIV-GVKPDEITYLNLLSACAHGGL-VKEAWYFFD 269
WN+MI G+A +G E + F EM +V +KPD +T+LN++SAC++ + +++A ++F+
Sbjct: 274 TWNAMISGYAHNGNSYEMIQHFEEMKMVEDLKPDSVTFLNVISACSNTEVPLQKAVHYFE 333
Query: 270 CLGKNGMT-PKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKL 328
+ + M P EH M+ +M + G+V +A + + ++ + ALL+ C L
Sbjct: 334 SMINDYMIEPTIEHCCSMIRLMGQRGEVWQAKRMIYELAFGSCGVVWRALLSACGACRNL 393
Query: 329 DLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEM 388
+A+ K+IELE D YV +SN++A + +W+ +R+ M + VKK G S++E+
Sbjct: 394 KVAKIAAAKVIELEGDDDYVYVTMSNIFASYGQWEDVSKVRKIMRQREVKKEVGRSWIEV 453
Query: 389 H 389
Sbjct: 454 E 454
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 101/239 (42%), Gaps = 28/239 (11%)
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G + +AL +F ++ S P+ + L AC L L GR +H ++ +V+
Sbjct: 22 GHFRKALGLFLQLNRSDVCPDAYSFTVALSACGQLSMLQFGRSIHCKIVKCSSDCGVVVG 81
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
L+DMY KC +++EA VF + K D+ WNS+I A +G ++ + + F +M
Sbjct: 82 NCLIDMYGKCASVKEATWVFDKLIDK--DIISWNSVIAACARNGRLELAYNFFCQMP--- 136
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
+ D I+Y +++ A G +++A N S + ++ Q EA
Sbjct: 137 -ELDTISYNEVINGIAQFGNIEDAIAIL----LNMPHSNSSSWNSVITAYVNRNQAREAL 191
Query: 301 QFLCQIPIQ------------------PTASMLGALLNGCMNHGKLDLAETVGRKLIEL 341
+F ++ A G L++ C G D + VG LI++
Sbjct: 192 EFFTKMHSSDIKKDEYTYSVILSGVAGAAAWKWGMLIHCCAIKGGWDTSVVVGSALIDM 250
>30174.m008625 pentatricopeptide repeat-containing protein, putative
Length = 751
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 182/354 (51%), Gaps = 38/354 (10%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGY 86
+ GL H YI K G+ V +L+ MY F
Sbjct: 228 KFGLGFHAYIEKNGFSGYVSVGTALLQMYGKF---------------------------- 259
Query: 87 AKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMV 146
S A VFD + +D+++WS +I Y R G +AL ++ +M+ + K NEVT V
Sbjct: 260 ---SKFSSAWLVFDQLNYKDLIAWSAMISVYARGGKPYDALNIYRQMQSTNEKANEVTFV 316
Query: 147 SVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK 206
S+L AC+ LGA + G +H ++ L ++L+D+Y K G++++ VF +
Sbjct: 317 SLLQACSALGAQELGESIHGFITKAGHSSNAFLNSALIDLYCKFGSVKKGKAVFDE--IS 374
Query: 207 PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEA-- 264
D+ W+SMI G+A +G E+L+ F++M G KP+E +L++LS C+ GL E
Sbjct: 375 TKDLICWSSMINGYALNGCGSEALETFADMLNWGFKPNETVFLSILSVCSQCGLEHEGRK 434
Query: 265 WYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMN 324
W+++ K + PK HYACMVD+++R G + EA F+ ++P+ P + GA+L GC +
Sbjct: 435 WFYY-MQEKYRLAPKLSHYACMVDLLSRHGHIEEALMFVKKMPVVPDKRIWGAVLAGCRS 493
Query: 325 H--GKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMG 376
G +++AE V R+L L+P YV L ++YA RW + + ++ G
Sbjct: 494 RGDGSIEVAEFVVRQLSALDPENTSYYVTLLDLYAEQGRWKDVERLTKIVDEKG 547
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 124/257 (48%), Gaps = 34/257 (13%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
+ +TF L +A + L +ELG +IHG+ITKAG+ S+ F++++LI +Y F + + VF
Sbjct: 311 NEVTFVSLLQACSALGAQELGESIHGFITKAGHSSNAFLNSALIDLYCKFGSVKKGKAVF 370
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
D I K+L+ W+SM++GYA G S A + F D+L+W
Sbjct: 371 DEISTKDLICWSSMINGYALNGCGSEALETF-----ADMLNW------------------ 407
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN-ELPLTLVLRTSLVDMY 187
G KPNE +S+L C+ G +GR +Y+ + L L +VD+
Sbjct: 408 --------GFKPNETVFLSILSVCSQCGLEHEGRKWFYYMQEKYRLAPKLSHYACMVDLL 459
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
++ G I+EAL + + P D IW +++ G G + F + + P+ +
Sbjct: 460 SRHGHIEEALMFVKKMPVVP-DKRIWGAVLAGCRSRGDGSIEVAEFVVRQLSALDPENTS 518
Query: 248 -YLNLLSACAHGGLVKE 263
Y+ LL A G K+
Sbjct: 519 YYVTLLDLYAEQGRWKD 535
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 125/262 (47%), Gaps = 10/262 (3%)
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
+KVF V NS++D YAKCG I + +F+ + E+D++SW +I V
Sbjct: 138 KKVFYSFTVVQ----NSLMDAYAKCGKIEASFYIFNRICEKDLISWRTVIRICVENECPR 193
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
EAL +F +M+ S + +E+ + + A L G H Y+ N + + T+L+
Sbjct: 194 EALDIFLKMQRSTTEADEIIIRDTIMASIQAKELKFGLGFHAYIEKNGFSGYVSVGTALL 253
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
MY K A VF + D+ W++MI +A G ++L+++ +M K +
Sbjct: 254 QMYGKFSKFSSAWLVFDQ--LNYKDLIAWSAMISVYARGGKPYDALNIYRQMQSTNEKAN 311
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLC 304
E+T+++LL AC+ G + + K G + + + ++D+ + G V +
Sbjct: 312 EVTFVSLLQACSALGAQELGESIHGFITKAGHSSNAFLNSALIDLYCKFGSVKKGKAVFD 371
Query: 305 QIPIQPT---ASML-GALLNGC 322
+I + +SM+ G LNGC
Sbjct: 372 EISTKDLICWSSMINGYALNGC 393
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 120/277 (43%), Gaps = 34/277 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML P+ +T + + ++L A HG++ K G+E + V +LI Y+ F
Sbjct: 1 MLLTDQRPNFVTLVSVIRGLGAFHCQDLISAAHGFVIKLGFELEVPVRTALIRFYTLF-- 58
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
D ++ ++FD DV+ WS ++ V+
Sbjct: 59 ------------------------------DFEISLKLFDQKLHNDVVLWSAMVSACVKN 88
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
Y E + F M G + N VT++S+L AC HLG L + +H + + V++
Sbjct: 89 AKYREGVQHFRRMLNYGTEANHVTVISILSACGHLGGLCFVKEIHGFCLKKVFYSFTVVQ 148
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
SL+D YAKCG I+ + ++F K D+ W ++I + +E+LD+F +M
Sbjct: 149 NSLMDAYAKCGKIEASFYIFNRICEK--DLISWRTVIRICVENECPREALDIFLKMQRST 206
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMT 277
+ DEI + + A +K F + KNG +
Sbjct: 207 TEADEIIIRDTIMASIQAKELKFGLGFHAYIEKNGFS 243
>29811.m000535 pentatricopeptide repeat-containing protein, putative
Length = 520
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 158/280 (56%), Gaps = 37/280 (13%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G IHGY + + D FVS+ LI +Y K
Sbjct: 251 GRFIHGYAVRNRVQLDIFVSSGLIELY-------------------------------FK 279
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
CG + A +F ++P+ +V+ W+ +I GYV GDY +AL +++EM+++ KP+ VT S+
Sbjct: 280 CGKVQSAENIFYMLPKANVVLWNVMISGYVTIGDYVKALDMYDEMKIASVKPDAVTFSSI 339
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
L AC+ L AL+KG+ +H+ + N+L ++ +L+DMYAKCGA+ EAL VF +
Sbjct: 340 LSACSQLAALEKGKEIHNCITKNDLETNEIVMGALLDMYAKCGAVDEALSVFNK--LPER 397
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFF 268
D+ W S+I + HG E+L LF E+ PD +T+L +LSAC+H GLV + +Y+F
Sbjct: 398 DLLSWTSIISAYGSHGQALEALRLFEELQQSKASPDAVTFLAVLSACSHAGLVDKGYYYF 457
Query: 269 DCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
+ + N G+ P EHY+C++D++ G++ E Q L +IP
Sbjct: 458 NQMITNYGIKPGLEHYSCLIDLL---GRIQEQSQELNEIP 494
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 156/288 (54%), Gaps = 8/288 (2%)
Query: 25 KRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF-----DGIPVKNLVSW 79
K E L + G + +G+E + ++I + D+ +++ +G+ + V
Sbjct: 111 KAEKALEMFGKMRDSGFEPNSVTLTTVISSCARLLDLERGKEIHREVMQNGMVLDGFVG- 169
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
++++D Y K G + +A+ +F+ MP++ +++W+ LI GY D E + +F M + G K
Sbjct: 170 SALVDMYGKFGCLDLAKDIFEQMPKKTLVAWNSLIAGYSSAADSKECIELFWRMNMEGTK 229
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
P T+ S+L AC+ L GR +H Y + N + L + + + L+++Y KCG +Q A ++
Sbjct: 230 PTVTTLSSILLACSRAAHLQHGRFIHGYAVRNRVQLDIFVSSGLIELYFKCGKVQSAENI 289
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F ++ ++V +WN MI G+ G ++LD++ EM I VKPD +T+ ++LSAC+
Sbjct: 290 FY--MLPKANVVLWNVMISGYVTIGDYVKALDMYDEMKIASVKPDAVTFSSILSACSQLA 347
Query: 260 LVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
+++ +C+ KN + ++D+ A+ G V EA ++P
Sbjct: 348 ALEKGKEIHNCITKNDLETNEIVMGALLDMYAKCGAVDEALSVFNKLP 395
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 147/300 (49%), Gaps = 33/300 (11%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD T+P + KA L + + G IH ++ K+G+ D V++SL+ ++
Sbjct: 28 PDSFTYPSVLKACGGLGRYDYGRMIHTHLIKSGFVFDIVVASSLVSLH------------ 75
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
AKC A Q+FD MPE+DV W+ +I Y + G ++AL
Sbjct: 76 -------------------AKCNLFGYAIQLFDEMPERDVACWNTVISCYYQDGKAEKAL 116
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+F +MR SG +PN VT+ +V+ +CA L L++G+ +H V+ N + L + ++LVDMY
Sbjct: 117 EMFGKMRDSGFEPNSVTLTTVISSCARLLDLERGKEIHREVMQNGMVLDGFVGSALVDMY 176
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
K G + A +F M + WNS+I G++ KE ++LF M++ G KP T
Sbjct: 177 GKFGCLDLAKDIFEQ--MPKKTLVAWNSLIAGYSSAADSKECIELFWRMNMEGTKPTVTT 234
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
++L AC+ ++ + +N + + ++++ + G+V A +P
Sbjct: 235 LSSILLACSRAAHLQHGRFIHGYAVRNRVQLDIFVSSGLIELYFKCGKVQSAENIFYMLP 294
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 98/193 (50%), Gaps = 3/193 (1%)
Query: 116 GYVRKGDYDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELP 174
Y + Y EAL +F+ + + +P+ T SVL AC LG D GRM+H ++I +
Sbjct: 3 AYTKNCMYTEALELFDRLLQYPYLQPDSFTYPSVLKACGGLGRYDYGRMIHTHLIKSGFV 62
Query: 175 LTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFS 234
+V+ +SLV ++AKC A+ +F M DV WN++I + G +++L++F
Sbjct: 63 FDIVVASSLVSLHAKCNLFGYAIQLFDE--MPERDVACWNTVISCYYQDGKAEKALEMFG 120
Query: 235 EMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAG 294
+M G +P+ +T ++S+CA ++ + +NGM + +VD+ + G
Sbjct: 121 KMRDSGFEPNSVTLTTVISSCARLLDLERGKEIHREVMQNGMVLDGFVGSALVDMYGKFG 180
Query: 295 QVAEAYQFLCQIP 307
+ A Q+P
Sbjct: 181 CLDLAKDIFEQMP 193
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 31/166 (18%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V PD +TF + A + L E G IH ITK E++ V +L+ MY+ + A
Sbjct: 329 VKPDAVTFSSILSACSQLAALEKGKEIHNCITKNDLETNEIVMGALLDMYAKCGAVDEAL 388
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
VF+ +P ++L+SW S++ Y G E
Sbjct: 389 SVFNKLPERDLLSWTSIISAYGS-------------------------------HGQALE 417
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN 171
AL +FEE++ S P+ VT ++VL AC+H G +DKG + +I N
Sbjct: 418 ALRLFEELQQSKASPDAVTFLAVLSACSHAGLVDKGYYYFNQMITN 463
>29598.m000463 pentatricopeptide repeat-containing protein, putative
Length = 517
Score = 191 bits (486), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 100/275 (36%), Positives = 161/275 (58%), Gaps = 5/275 (1%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYIT--KAGYESDRFVSNSLIHMYSSF 58
M+ + + PD T L + L + G +H +I K+ S+ + N+L+ MY
Sbjct: 217 MMALDLKPDEFTMLGLLVSCGKLGEARFGKTVHAWIERRKSITSSNLILGNALLDMYVKC 276
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
+++ A + F + K++VSWN+++ G AK GD+ +AR +FD MP +D +SW+ LI Y
Sbjct: 277 QELDLAHRTFSALTEKDVVSWNTIIAGCAKAGDLELARTLFDQMPCRDFVSWNSLIAEYA 336
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
+GD+ + +M PN TM S++ A A +GALD+GR H +VI ++ + V
Sbjct: 337 NRGDFIIVRDLLYDMVAENVVPNNTTMASLISAAAEIGALDQGRWAHGWVIRMQIKIDAV 396
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
L ++L+DMY KCG+I A +F + K DV +W +MI GFA HG ++L+LF EM
Sbjct: 397 LGSALIDMYCKCGSINNAFLIFNEIIEK--DVILWTTMITGFAFHGYGSKALELFYEMQ- 453
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK 273
V P+EIT++++L+AC+H GLV + F+ L +
Sbjct: 454 ANVTPNEITFVSVLAACSHSGLVDQGIEIFNSLKQ 488
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 156/308 (50%), Gaps = 28/308 (9%)
Query: 50 SLIHMYSSFRDIPNARKVFDGIPVKNLVSW----NSMLDGYAKCGDISMARQVFDLMPEQ 105
+L+++ S R + ++V + L ++ NS++ Y + G +A ++F MP
Sbjct: 130 TLLYLLHSARHVSEVKQVQCHAIILGLSTYRYLQNSLIKVYLENGLFCLAHKIFRQMPAP 189
Query: 106 DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMH 165
DV+S++ +I G ++G EA+ + +M KP+E TM+ +L +C LG G+ +H
Sbjct: 190 DVVSFNIMITGCAKQGCGLEAIQLLYDMMALDLKPDEFTMLGLLVSCGKLGEARFGKTVH 249
Query: 166 HYVIDNELPLT---LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFAC 222
+ I+ +T L+L +L+DMY KC + A F + + DV WN++I G A
Sbjct: 250 AW-IERRKSITSSNLILGNALLDMYVKCQELDLAHRTFSA--LTEKDVVSWNTIIAGCAK 306
Query: 223 HGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG---LVKEAWYFFDCLGKNGMTPK 279
G ++ + LF +M D +++ +L++ A+ G +V++ Y D + +N + P
Sbjct: 307 AGDLELARTLFDQMPC----RDFVSWNSLIAEYANRGDFIIVRDLLY--DMVAEN-VVPN 359
Query: 280 SEHYACMVDVMARAGQVAE---AYQFLCQIPIQPTASMLGALLN-----GCMNHGKLDLA 331
+ A ++ A G + + A+ ++ ++ I+ A + AL++ G +N+ L
Sbjct: 360 NTTMASLISAAAEIGALDQGRWAHGWVIRMQIKIDAVLGSALIDMYCKCGSINNAFLIFN 419
Query: 332 ETVGRKLI 339
E + + +I
Sbjct: 420 EIIEKDVI 427
>29726.m004020 pentatricopeptide repeat-containing protein, putative
Length = 406
Score = 191 bits (484), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 113/313 (36%), Positives = 176/313 (56%), Gaps = 6/313 (1%)
Query: 113 LIDGYVRKGDYDEALAVFEEMR-VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN 171
+I Y + +EAL VF + + + N + SV+ ACA LG L G++ H VI +
Sbjct: 1 MIAAYAQNARGNEALEVFRQFNSLVQERSNHFMLASVINACASLGKLVSGKVAHGAVIRS 60
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLD 231
+ V+ ++LVDMYAKCG + VFR + PS + + SMI G A +GL K SL
Sbjct: 61 GYEVNDVVASALVDMYAKCGCFSYSDKVFRQ-IPNPS-IIPYTSMIAGAAKYGLGKVSLQ 118
Query: 232 LFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVM 290
LF +M +KP+++T++ +L AC+H GLV E + + GK+G+ P +HY C+VD++
Sbjct: 119 LFEDMVRRRIKPNDVTFVGVLHACSHSGLVNEGLQHLNSMYGKHGIMPDVKHYTCVVDML 178
Query: 291 ARAGQVAEAYQFLCQIPIQPT--ASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGR 348
+R+G++ EAYQ I + P+ A + G LL+ G++D+A + LIE G
Sbjct: 179 SRSGRLDEAYQLAKSIRVNPSEGALLWGTLLSASRLQGRVDVAVEASKWLIESNQQVAGT 238
Query: 349 YVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQI 408
YV LSN YA+ W+ A +R M+R+GV K PG S+VE+ + + F A + S ++
Sbjct: 239 YVTLSNTYALAGEWENAYYLRSQMKRVGVYKEPGCSWVEIKDSTYVFYAGNLSCERGNEV 298
Query: 409 YMMLGFIVSQMKH 421
L + +MK
Sbjct: 299 LNFLKELERRMKE 311
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 122/272 (44%), Gaps = 36/272 (13%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
+H + A A L K G HG + ++GYE + V+++L+ MY
Sbjct: 29 SNHFMLASVINACASLGKLVSGKVAHGAVIRSGYEVNDVVASALVDMY------------ 76
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
AKCG S + +VF +P ++ ++ +I G + G +L
Sbjct: 77 -------------------AKCGCFSYSDKVFRQIPNPSIIPYTSMIAGAAKYGLGKVSL 117
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG--RMMHHYVIDNELPLTLVLRTSLVD 185
+FE+M KPN+VT V VL AC+H G +++G + Y +P + T +VD
Sbjct: 118 QLFEDMVRRRIKPNDVTFVGVLHACSHSGLVNEGLQHLNSMYGKHGIMP-DVKHYTCVVD 176
Query: 186 MYAKCGAIQEALHVFRSGLMKPSD-VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
M ++ G + EA + +S + PS+ +W +++ G V +++ S+ I +
Sbjct: 177 MLSRSGRLDEAYQLAKSIRVNPSEGALLWGTLLSASRLQGRVDVAVEA-SKWLIESNQQV 235
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKNGM 276
TY+ L + A G + A+Y + + G+
Sbjct: 236 AGTYVTLSNTYALAGEWENAYYLRSQMKRVGV 267
>27660.m000082 pentatricopeptide repeat-containing protein, putative
Length = 515
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 144/231 (62%), Gaps = 3/231 (1%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
+ D + N +I Y D+ A+++F +P K+++SWN++L+GYA GDI ++F+
Sbjct: 258 QRDVVLWNIMISGYIDIGDLVRAQELFHKMPNKDVMSWNTLLNGYANGGDIEACERLFEE 317
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG-PKPNEVTMVSVLCACAHLGALDK 160
MPE++V SW+ LI GY G + E L+ F+ M V G PN+ T+V+VL ACA LGALD
Sbjct: 318 MPERNVFSWNGLIGGYAHHGCFLEVLSSFKRMLVDGIVVPNDATLVTVLSACARLGALDL 377
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
G+ +H Y N + + +L+DMYAKCG ++ A+ VF+S + D+ WN++IGG
Sbjct: 378 GKWVHMYAQSNGYKGNVYIGNALIDMYAKCGNVENAIVVFKS--LDKKDLISWNTLIGGL 435
Query: 221 ACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL 271
A HG ++L LFS M G KPD IT+L +L AC H GLV + + +F +
Sbjct: 436 AVHGRAADALYLFSRMKDAGEKPDGITFLGVLCACTHMGLVDDGFSYFQSM 486
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 137/315 (43%), Gaps = 30/315 (9%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGD 91
I +I G + + +++ +I ++ F+ + +A K+FD IP N+ +WN+ML GY+
Sbjct: 85 IQSHIINHGLQFNDYITPKIITSFALFKRMRHAHKLFDQIPEPNVSNWNAMLKGYSLNDS 144
Query: 92 ISMARQVFDLMPEQDVL----SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
+F M D+L S+ +I V+ + E + + SG + N
Sbjct: 145 HREVIVLFRKMISMDILPNCFSFPIVIKSSVKINAFKEGEELHCFVIKSGCRANP----- 199
Query: 148 VLCACAHLGALDKGRMM--HHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
+ GRM+ + V + +V TS++ + C I+ A +F L
Sbjct: 200 -FVGTMLIDLYSSGRMIVSAYRVFGEMIERNVVAWTSMIKGFILCNDIETARRLFE--LA 256
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
DV +WN MI G+ G + + +LF +M D +++ LL+ A+GG ++
Sbjct: 257 PQRDVVLWNIMISGYIDIGDLVRAQELFHKMP----NKDVMSWNTLLNGYANGGDIEACE 312
Query: 266 YFF------DCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALL 319
F + NG+ H+ C ++V++ ++ L + P + L +L
Sbjct: 313 RLFEEMPERNVFSWNGLIGGYAHHGCFLEVLSSFKRM------LVDGIVVPNDATLVTVL 366
Query: 320 NGCMNHGKLDLAETV 334
+ C G LDL + V
Sbjct: 367 SACARLGALDLGKWV 381
>29848.m004644 pentatricopeptide repeat-containing protein, putative
Length = 397
Score = 188 bits (478), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 157/275 (57%), Gaps = 33/275 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML V P+ T+PF+ KA A + LG ++HG + K G+++D V N+++HMY RD
Sbjct: 127 MLEYDVLPNKFTYPFVLKACAGIGYLNLGKSVHGSVLKFGFDNDVHVQNTMVHMYCCGRD 186
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I AR+VFD M ++D +SWS +I GY R
Sbjct: 187 ------------------------------GIEFAREVFDEMCKRDPVSWSAMIGGYARL 216
Query: 121 GDYDEALAVFEEMRVSGP-KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
G +A+ +F EM++ G +P+E+TMVSVL AC LGAL+ G+ + Y+ ++ ++ L
Sbjct: 217 GRCSDAIDLFREMQIEGVCRPDEITMVSVLSACTDLGALELGKWVESYIEKEKVQKSVEL 276
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+L+DM+AKCG + +A+ +FR+ MK + W S+I G A HG E+++ F EM
Sbjct: 277 CNALIDMFAKCGDVDKAIKLFRN--MKDRTIVSWTSVIAGLAMHGRGLEAVEFFEEMIKS 334
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN 274
GV PD++ ++ LLSAC+H GLV + +FD + +N
Sbjct: 335 GVLPDDVAFIGLLSACSHSGLVDKGREYFDLMREN 369
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 9/227 (3%)
Query: 106 DVLSWSCLIDGYVRKGDYDE--ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRM 163
D ++ +I Y + + AL +++ M PN+ T VL ACA +G L+ G+
Sbjct: 98 DTFLFNTIIRAYAHSNNVSKGKALCMYKLMLEYDVLPNKFTYPFVLKACAGIGYLNLGKS 157
Query: 164 MHHYVIDNELPLTLVLRTSLVDMYAKCG--AIQEALHVFRSGLMKPSDVFIWNSMIGGFA 221
+H V+ + ++ ++V MY CG I+ A VF M D W++MIGG+A
Sbjct: 158 VHGSVLKFGFDNDVHVQNTMVHMYC-CGRDGIEFAREVFDE--MCKRDPVSWSAMIGGYA 214
Query: 222 CHGLVKESLDLFSEMHIVGV-KPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKS 280
G +++DLF EM I GV +PDEIT +++LSAC G ++ + + K +
Sbjct: 215 RLGRCSDAIDLFREMQIEGVCRPDEITMVSVLSACTDLGALELGKWVESYIEKEKVQKSV 274
Query: 281 EHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
E ++D+ A+ G V +A + + + S +++ G HG+
Sbjct: 275 ELCNALIDMFAKCGDVDKAIKLFRNMKDRTIVSWT-SVIAGLAMHGR 320
>28962.m000446 pentatricopeptide repeat-containing protein, putative
Length = 311
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/275 (38%), Positives = 160/275 (58%), Gaps = 6/275 (2%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G HG + K G + V NSLIH Y + ARKVFD + +LVSWNS+++ YA
Sbjct: 7 GQKCHGQVLKNGVDCILPVQNSLIHFYGCCGLVELARKVFDEMSQADLVSWNSIVNAYAN 66
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
G++ A +F++M + V+SW+ +I GY++ + +L +F +M SG + N+ TMVSV
Sbjct: 67 VGELDTAHDIFNIMLGKTVVSWNVMIYGYLKGNNPGCSLMLFRKMVNSGLRGNDKTMVSV 126
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
L AC L +GR +H ++I L +++L TSL+DMY+KC ++ A +F S M
Sbjct: 127 LSACGKSARLTEGRSIHGFLIRTSLNFSVILLTSLMDMYSKCQKVELARSIFDS--MVHR 184
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEM-HIVG--VKPDEITYLNLLSACAHGGLVKEAW 265
++ WN+MI G HG + LDLF+EM + G + PDE+TY+ ++SACA GL+ E
Sbjct: 185 NLICWNAMILGHCIHGKPADGLDLFAEMVNSTGETILPDEVTYIGVISACARAGLLTEGR 244
Query: 266 YFFD-CLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
FF + K + P HY CM ++ A ++A
Sbjct: 245 KFFSQMMDKYTIKPNFAHYWCMANLYAGCNIASDA 279
>30174.m008766 pentatricopeptide repeat-containing protein, putative
Length = 429
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 146/231 (63%), Gaps = 3/231 (1%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
E D N+++ Y D+ +A+ +FD +P +N++SW SM+ GY GD+ AR +FD
Sbjct: 182 EKDSAAYNAMLDGYVKAGDMESAQSLFDKMPARNVISWTSMIYGYCSGGDVLTARSLFDA 241
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP-KPNEVTMVSVLCACAHLGALDK 160
MPE+++ SW+ +I GY + EAL +F EM+ +P++VT+VSVL A A LGALD
Sbjct: 242 MPERNLFSWNAMIGGYSQNNKSHEALKLFHEMQSRTLFEPDKVTVVSVLPAIADLGALDL 301
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
G +H + ++ ++ + T+LVDMYAKCG + +A VF S M + WN++I GF
Sbjct: 302 GSWIHQFARLKKIDRSINVCTALVDMYAKCGEMLKARRVFDS--MPKKEEASWNALINGF 359
Query: 221 ACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL 271
A +G E+L FSEM GVKP+++T +++LSAC HGGLV+E +F +
Sbjct: 360 AVNGCADEALTAFSEMKREGVKPNDVTMISVLSACNHGGLVEEGKRWFKAM 410
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 162/331 (48%), Gaps = 43/331 (12%)
Query: 4 VGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPN 63
G PD+ TF LAK+ + G IH ++ K G+ D +VS +L+ MY+ F ++
Sbjct: 82 TGFLPDNFTFTALAKSCGLNMAVWEGFEIHNHVLKMGFGLDLYVSTALVDMYAKFGELCM 141
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
ARK+FD + + +VSW +++ G + GD+ AR +FD MPE+D +++ ++DGYV+ GD
Sbjct: 142 ARKMFDEMAERGVVSWTALIGGCMRSGDMGNARILFDQMPEKDSAAYNAMLDGYVKAGDM 201
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
+ A ++F++M P N ++ TS+
Sbjct: 202 ESAQSLFDKM----PARNVISW-----------------------------------TSM 222
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV-K 242
+ Y G + A +F + M ++F WN+MIGG++ + E+L LF EM + +
Sbjct: 223 IYGYCSGGDVLTARSLFDA--MPERNLFSWNAMIGGYSQNNKSHEALKLFHEMQSRTLFE 280
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQF 302
PD++T +++L A A G + + + +VD+ A+ G++ +A +
Sbjct: 281 PDKVTVVSVLPAIADLGALDLGSWIHQFARLKKIDRSINVCTALVDMYAKCGEMLKARRV 340
Query: 303 LCQIPIQPTASMLGALLNGCMNHGKLDLAET 333
+P + AS AL+NG +G D A T
Sbjct: 341 FDSMPKKEEAS-WNALINGFAVNGCADEALT 370
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 50 SLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLS 109
S IH ++ + I + V +++D YAKCG++ AR+VFD MP+++ S
Sbjct: 303 SWIHQFARLKKIDRSINVC-----------TALVDMYAKCGEMLKARRVFDSMPKKEEAS 351
Query: 110 WSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG----RMMH 165
W+ LI+G+ G DEAL F EM+ G KPN+VTM+SVL AC H G +++G + M+
Sbjct: 352 WNALINGFAVNGCADEALTAFSEMKREGVKPNDVTMISVLSACNHGGLVEEGKRWFKAMY 411
Query: 166 HYVIDN 171
+V D
Sbjct: 412 EFVADT 417
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 8/186 (4%)
Query: 86 YAKCGDISMARQVFDLMPEQD-VLSWSCLIDGYVRKGDYDEALAVFEEMRV-SGPKPNEV 143
Y I ARQVFD P +D + +I +V + E+ +++++R +G P+
Sbjct: 30 YESLAIIQHARQVFDNRPHKDDTFLCNSMIKAHVGMRQFYESFTLYQDLRKGTGFLPDNF 89
Query: 144 TMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSG 203
T ++ +C A+ +G +H++V+ L L + T+LVDMYAK G + A +F
Sbjct: 90 TFTALAKSCGLNMAVWEGFEIHNHVLKMGFGLDLYVSTALVDMYAKFGELCMARKMFDE- 148
Query: 204 LMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKE 263
M V W ++IGG G + + LF +M + D Y +L G ++
Sbjct: 149 -MAERGVVSWTALIGGCMRSGDMGNARILFDQMP----EKDSAAYNAMLDGYVKAGDMES 203
Query: 264 AWYFFD 269
A FD
Sbjct: 204 AQSLFD 209
>30204.m001799 pentatricopeptide repeat-containing protein, putative
Length = 274
Score = 185 bits (469), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 155/263 (58%), Gaps = 25/263 (9%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V P+ TFP + KA A + + G +HGY+ K ++D FV+++L+ MY + +AR
Sbjct: 7 VEPNRFTFPSVLKACAKTARLQEGKQVHGYVIKLRLDNDEFVASNLVRMYVMCGVMEDAR 66
Query: 66 KVF--------------------DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ 105
+F +GI +V WN M+DGY + GD++++R +FD MP +
Sbjct: 67 VLFRKHVFEYDICSKSTSDKRKREGI----VVLWNVMIDGYVRLGDLAVSRDLFDNMPYR 122
Query: 106 DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMH 165
V+SW+ +I GY + G + EA+ +F +M++ PN VT+VSVL A + LGAL+ G+ +H
Sbjct: 123 TVVSWNVMISGYAQNGYFKEAIELFHDMQMDDMSPNYVTLVSVLPAISRLGALELGKWVH 182
Query: 166 HYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGL 225
Y N + + VL ++L+DMY+KCG+I++A VF S + +V W+++IGG A HG
Sbjct: 183 LYAEKNNIEVNDVLGSALIDMYSKCGSIEKATQVFES-IHNKMNVVTWSAIIGGLAMHGR 241
Query: 226 VKESLDLFSEMHIVGVKPDEITY 248
K++LD + M GV P ++ Y
Sbjct: 242 AKDALDYYRRMQEAGVTPSDVVY 264
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 106/247 (42%), Gaps = 45/247 (18%)
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL- 197
+PN T SVL ACA L +G+ +H YVI L + ++LV MY CG +++A
Sbjct: 8 EPNRFTFPSVLKACAKTARLQEGKQVHGYVIKLRLDNDEFVASNLVRMYVMCGVMEDARV 67
Query: 198 ----HVF--------------RSGLMKPSDVFI--------------------------W 213
HVF R G++ +V I W
Sbjct: 68 LFRKHVFEYDICSKSTSDKRKREGIVVLWNVMIDGYVRLGDLAVSRDLFDNMPYRTVVSW 127
Query: 214 NSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK 273
N MI G+A +G KE+++LF +M + + P+ +T +++L A + G ++ + K
Sbjct: 128 NVMISGYAQNGYFKEAIELFHDMQMDDMSPNYVTLVSVLPAISRLGALELGKWVHLYAEK 187
Query: 274 NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAET 333
N + + ++D+ ++ G + +A Q I + A++ G HG+ A
Sbjct: 188 NNIEVNDVLGSALIDMYSKCGSIEKATQVFESIHNKMNVVTWSAIIGGLAMHGRAKDALD 247
Query: 334 VGRKLIE 340
R++ E
Sbjct: 248 YYRRMQE 254
>30063.m001410 pentatricopeptide repeat-containing protein, putative
Length = 524
Score = 185 bits (469), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 159/266 (59%), Gaps = 4/266 (1%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+R+GV P+ T+ + + + + + K + + FV +L+ M + +
Sbjct: 178 MIRLGVQPNETTWATVISSCSSCGDPCRAESFVKLLDKRKIKMNYFVKTALLDMNAKCGN 237
Query: 61 IPNARKVFDGIPV-KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
+ AR +F+ + V +N +WN+M+ Y + GD+ AR +FD MPE+D +SW+ +I GY +
Sbjct: 238 LEAARGIFNELGVSRNSSTWNAMISAYTRVGDLLSARDLFDKMPERDAVSWNTMISGYAQ 297
Query: 120 KGDYDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
G A+ +F+EM +P+EVTMVS++ AC HLGAL+ G + +++ + + LT+
Sbjct: 298 NGQSAMAIELFKEMIDAKDSQPDEVTMVSIISACGHLGALELGTWIVNFISEYRIELTIS 357
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+L+ MY+KCG ++EA +F+ M+ DV +NS+IGGFA HG E++ L M
Sbjct: 358 GYNALIFMYSKCGNMKEAQRIFQE--METRDVVSYNSLIGGFAAHGEGNEAIKLLLSMKE 415
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEA 264
GV PD +TY+ +L+AC+H GLV+E
Sbjct: 416 EGVDPDHVTYIGVLTACSHAGLVEEG 441
Score = 154 bits (389), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 181/381 (47%), Gaps = 68/381 (17%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D +P + K+S + G+ H +I K G++SD ++ N ++ MY+ I NARK+F
Sbjct: 28 DASLYPLVIKSSG-----KDGILFHAHILKLGHQSDPYIRNVILDMYAKHSLIENARKLF 82
Query: 69 DGIPVKNLVSWNSMLDGYAKCG-------------------------------DISMARQ 97
D + ++L WNSM+ GY KCG ++ AR+
Sbjct: 83 DEMTERSLADWNSMICGYWKCGNETEACSLFSMTPERNVITWTAMVTGFSKIKELDSARK 142
Query: 98 VFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGA 157
FD MP ++++SW+ +I GY + G +EAL +F M G +PNE T +V+ +C+ G
Sbjct: 143 YFDDMPVKNIVSWNAIISGYAQNGFVEEALKLFNHMIRLGVQPNETTWATVISSCSSCGD 202
Query: 158 LDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF----------------- 200
+ + ++ + ++T+L+DM AKCG ++ A +F
Sbjct: 203 PCRAESFVKLLDKRKIKMNYFVKTALLDMNAKCGNLEAARGIFNELGVSRNSSTWNAMIS 262
Query: 201 ---RSG-LMKPSDVF---------IWNSMIGGFACHGLVKESLDLFSEM-HIVGVKPDEI 246
R G L+ D+F WN+MI G+A +G +++LF EM +PDE+
Sbjct: 263 AYTRVGDLLSARDLFDKMPERDAVSWNTMISGYAQNGQSAMAIELFKEMIDAKDSQPDEV 322
Query: 247 TYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
T ++++SAC H G ++ + + + + + Y ++ + ++ G + EA + ++
Sbjct: 323 TMVSIISACGHLGALELGTWIVNFISEYRIELTISGYNALIFMYSKCGNMKEAQRIFQEM 382
Query: 307 PIQPTASMLGALLNGCMNHGK 327
+ S +L+ G HG+
Sbjct: 383 ETRDVVS-YNSLIGGFAAHGE 402
>27837.m000163 pentatricopeptide repeat-containing protein, putative
Length = 679
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 169/325 (52%), Gaps = 58/325 (17%)
Query: 5 GVFPDHLTFPFLAKASA---CLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDI 61
G+ P+ T + ASA +E +IHGY+ K E DR+V N+L+ MYS R +
Sbjct: 380 GLCPNTTTMASIVPASARCESFFSKE---SIHGYVIKRDLERDRYVQNALMDMYSRMRKM 436
Query: 62 PNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKG 121
++ +FD + V+++VSWN+M I GYV G
Sbjct: 437 EISKTIFDSMEVRDIVSWNTM-------------------------------ITGYVISG 465
Query: 122 DYDEALAVFEEMRVSGP-------------KPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
Y++AL + EM+ + KPN +T+++VL CA L AL KG+ +H Y
Sbjct: 466 CYNDALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCASLAALAKGKEIHAYA 525
Query: 169 IDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKE 228
+ N L + + ++LVDMYAKCG + + VF M +V WN ++ + HG +E
Sbjct: 526 VRNALASEVTVGSALVDMYAKCGCLNLSRRVFDQ--MPIKNVITWNVIVMAYGMHGNGEE 583
Query: 229 SLDLFSEMHIVG-----VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEH 282
+L+LF +M G VKP E+T + +L+AC+H G+V E F + + G+ P +H
Sbjct: 584 ALELFKDMVAKGDNVGEVKPTEVTMIAILAACSHSGMVDEGLKLFHRMKDDHGIEPGPDH 643
Query: 283 YACMVDVMARAGQVAEAYQFLCQIP 307
YAC+ D++ RAG+V +AY F+ +P
Sbjct: 644 YACVADLLGRAGKVEQAYDFINTMP 668
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 124/260 (47%), Gaps = 36/260 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ GV PD FP + KA L LG IH ++ K GYES
Sbjct: 68 MILSGVSPDSYAFPVVLKAVTGLQDLNLGKQIHAHVVKYGYES----------------- 110
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
++ NS+++ Y KC ++ +VFD + E+D++SW+ LI + R
Sbjct: 111 -------------SSVAIANSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCRA 157
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHL---GALDKGRMMHHYVIDNELPLTL 177
+++ AL F M +P+ T+VS + AC++L L G+ +H Y N T
Sbjct: 158 QEWELALEAFRFMLAEDLEPSSFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNGHWSTF 217
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
+L+ MYA G + +A +F+ L + ++ WN+MI F+ + E+L M
Sbjct: 218 T-NNALMTMYANLGRLDDAKFLFK--LFEDRNLISWNTMISSFSQNERFVEALMSLRYMV 274
Query: 238 IVGVKPDEITYLNLLSACAH 257
+ GVKPD +T ++L AC++
Sbjct: 275 LEGVKPDGVTLASVLPACSY 294
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 141/323 (43%), Gaps = 46/323 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ GV PD +T + A + L G IH Y ++G + NS +
Sbjct: 273 MVLEGVKPDGVTLASVLPACSYLEMLGTGKEIHAYALRSG----DLIENSFVG------- 321
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
++++D Y CG + R+VFD + E+ W+ +I GY +
Sbjct: 322 -------------------SALVDMYCNCGQVGSGRRVFDGILERKTGLWNAMIAGYAQN 362
Query: 121 GDYDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
++AL +F EM V+G PN TM S++ A A + +H YVI +L +
Sbjct: 363 EHDEKALMLFIEMVAVAGLCPNTTTMASIVPASARCESFFSKESIHGYVIKRDLERDRYV 422
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+ +L+DMY++ ++ + +F S M+ D+ WN+MI G+ G ++L + EM
Sbjct: 423 QNALMDMYSRMRKMEISKTIFDS--MEVRDIVSWNTMITGYVISGCYNDALLMLHEMQHA 480
Query: 240 G-------------VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACM 286
KP+ IT + +L CA + + +N + + + +
Sbjct: 481 NEGINKHDGDKQACFKPNSITLMTVLPGCASLAALAKGKEIHAYAVRNALASEVTVGSAL 540
Query: 287 VDVMARAGQVAEAYQFLCQIPIQ 309
VD+ A+ G + + + Q+PI+
Sbjct: 541 VDMYAKCGCLNLSRRVFDQMPIK 563
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 122/252 (48%), Gaps = 41/252 (16%)
Query: 12 TFPFLAKASAC--LLKRE---LGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARK 66
+F ++ AC L K E LG IHGY + G+ S F +N+L+ MY
Sbjct: 179 SFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNGHWS-TFTNNALMTMY----------- 226
Query: 67 VFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEA 126
A G + A+ +F L +++++SW+ +I + + + EA
Sbjct: 227 --------------------ANLGRLDDAKFLFKLFEDRNLISWNTMISSFSQNERFVEA 266
Query: 127 LAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI-DNELPLTLVLRTSLVD 185
L M + G KP+ VT+ SVL AC++L L G+ +H Y + +L + ++LVD
Sbjct: 267 LMSLRYMVLEGVKPDGVTLASVLPACSYLEMLGTGKEIHAYALRSGDLIENSFVGSALVD 326
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIVGVKPD 244
MY CG + VF L + + +WN+MI G+A + +++L LF EM + G+ P+
Sbjct: 327 MYCNCGQVGSGRRVFDGILERKTG--LWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPN 384
Query: 245 EITYLNLLSACA 256
T +++ A A
Sbjct: 385 TTTMASIVPASA 396
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
SW + R + EA++ + +M +SG P+ VL A L L+ G+ +H +V
Sbjct: 44 SWIESLRFNTRSNLFREAISTYVDMILSGVSPDSYAFPVVLKAVTGLQDLNLGKQIHAHV 103
Query: 169 IDNELPLTLV-LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
+ + V + SLV+ Y KC + + VF + D+ WNS+I F +
Sbjct: 104 VKYGYESSSVAIANSLVNFYGKCSELDDVYKVFDR--INERDLVSWNSLISAFCRAQEWE 161
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
+L+ F M ++P T ++ + AC++
Sbjct: 162 LALEAFRFMLAEDLEPSSFTLVSPVIACSN 191
>30174.m009141 pentatricopeptide repeat-containing protein, putative
Length = 336
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/257 (39%), Positives = 146/257 (56%), Gaps = 6/257 (2%)
Query: 30 LAIHGYITKA----GYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDG 85
+ I+ + KA G+ + V NSLI MY F ++ AR VFD IP +VSW M+ G
Sbjct: 73 ICIYNTMIKALLLKGFSVNAVVGNSLILMYCGFCNMRAARYVFDEIPGPCVVSWTLMISG 132
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
+AK GDI AR FD P +D +I GYV+ + E L +F ++++ P+E
Sbjct: 133 FAKVGDIESARLFFDGAPRKDRGICGAMISGYVQNNCFKECLYMFSMIQLTDNVPDEGIF 192
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
+S+LCACA LGALD G +H Y+ LPLT+ L T L+DMYAKCG + A +F M
Sbjct: 193 LSILCACAQLGALDTGIWIHRYMDRLGLPLTIRLSTGLIDMYAKCGNVDLAKSLFDE--M 250
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
D WN MI G A HG + +++LF +M G KPD++T++ +LSAC++ G+ E +
Sbjct: 251 PQRDTVCWNVMISGLAMHGDGEGAINLFLKMEEAGFKPDDVTFIAILSACSYSGMAYEGF 310
Query: 266 YFFDCLGKNGMTPKSEH 282
F + G P +E
Sbjct: 311 SFRAFWNELGPPPLAEE 327
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 31/154 (20%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD F + A A L + G+ IH Y+ + G +S LI MY+ ++ A+ +
Sbjct: 187 PDEGIFLSILCACAQLGALDTGIWIHRYMDRLGLPLTIRLSTGLIDMYAKCGNVDLAKSL 246
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
FD +P ++ V WN M+ G A GD + A+
Sbjct: 247 FDEMPQRDTVCWNVMISGLA-------------------------------MHGDGEGAI 275
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
+F +M +G KP++VT +++L AC++ G +G
Sbjct: 276 NLFLKMEEAGFKPDDVTFIAILSACSYSGMAYEG 309
>29597.m000283 pentatricopeptide repeat-containing protein, putative
Length = 434
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 140/231 (60%), Gaps = 2/231 (0%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
E D F LI +S + AR++FD +P +NLVSWN+M++GY K GD +A ++FD
Sbjct: 201 ERDLFSWTVLIDGFSKCGKVDVARELFDKMPSRNLVSWNAMINGYMKAGDFVLASELFDK 260
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
MPE++++SW+ ++ GY + EAL +F M PN T+VS A + L +L G
Sbjct: 261 MPEKNLISWNSMVAGYDLNERFKEALDLFLTMLERDFTPNHATLVSTFSAVSGLASLSTG 320
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA 221
+ MH Y++ N L VL TSL++MY+KCG I+ AL VF+ L+ + W ++I G
Sbjct: 321 KWMHSYMVKNGFQLDGVLATSLINMYSKCGNIESALSVFQ--LITKKKLGHWTAIIVGLG 378
Query: 222 CHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLG 272
HG+ +L+ F EM G++P IT++ +L+AC+H GLV++ +FD +
Sbjct: 379 MHGMADNALEFFHEMCRTGMRPHAITFIGVLNACSHAGLVEDGRKYFDMMA 429
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 152/324 (46%), Gaps = 42/324 (12%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD T P + K A L + G IHG + K G+ ++FVS+SL++MYS +DI +A+KV
Sbjct: 105 PDGFTLPCVIKGCARLHATKEGKQIHGLVLKLGFGLNKFVSSSLVNMYSKCKDIDSAKKV 164
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
F + K+LVSWNS++DGY KCG + + ++F+ MPE+D+ SW+ LIDG+ + G D A
Sbjct: 165 FLSMDDKDLVSWNSLIDGYVKCGQVELGMKLFEEMPERDLFSWTVLIDGFSKCGKVDVAR 224
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+F++M P N LV ++++ Y
Sbjct: 225 ELFDKM----PSRN-----------------------------------LVSWNAMINGY 245
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
K G A +F M ++ WNSM+ G+ + KE+LDLF M P+ T
Sbjct: 246 MKAGDFVLASELFDK--MPEKNLISWNSMVAGYDLNERFKEALDLFLTMLERDFTPNHAT 303
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
++ SA + + + + KNG ++++ ++ G + A Q+
Sbjct: 304 LVSTFSAVSGLASLSTGKWMHSYMVKNGFQLDGVLATSLINMYSKCGNIESALSVF-QLI 362
Query: 308 IQPTASMLGALLNGCMNHGKLDLA 331
+ A++ G HG D A
Sbjct: 363 TKKKLGHWTAIIVGLGMHGMADNA 386
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 70/162 (43%), Gaps = 31/162 (19%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML P+H T A + L G +H Y+ K G++ D ++ SLI+MYS +
Sbjct: 292 MLERDFTPNHATLVSTFSAVSGLASLSTGKWMHSYMVKNGFQLDGVLATSLINMYSKCGN 351
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I +A VF I K L G+ W+ +I G
Sbjct: 352 IESALSVFQLITKKKL--------GH-----------------------WTAIIVGLGMH 380
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR 162
G D AL F EM +G +P+ +T + VL AC+H G ++ GR
Sbjct: 381 GMADNALEFFHEMCRTGMRPHAITFIGVLNACSHAGLVEDGR 422
>28448.m000361 pentatricopeptide repeat-containing protein, putative
Length = 453
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/256 (36%), Positives = 159/256 (62%), Gaps = 13/256 (5%)
Query: 29 GLAIHGYITKAGYESDRFVS------NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSM 82
GLA +G I +A D+ N++I Y+ + A ++F+ +P ++L SWN+M
Sbjct: 164 GLARNGRIDEARKIFDKMPERNVVSWNAMITGYAKNMRLVEAFELFERMPERDLPSWNTM 223
Query: 83 LDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM-RVSGPKPN 141
+ G+ + ++ +AR++ D MPE++V+SW+ +I GYV++G+ + AL +F EM R G PN
Sbjct: 224 ITGFIQNKELKLARKLLDEMPEKNVVSWTTMITGYVQEGESEAALNIFMEMIRDGGVMPN 283
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYV---IDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
E T V+VL AC+ L L +G+ +H + + ++P + ++L++MY+KCG + A
Sbjct: 284 EGTFVNVLGACSDLAGLGEGQQVHQMISKTVYQDMPFVV---SALINMYSKCGELDMARK 340
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHG 258
+F + D+ WN M+ +A HG KE+++LF+EM +G +PD+I+Y+ LLSAC+H
Sbjct: 341 MFDNRTTSQRDLVSWNCMVAAYAHHGCGKEAINLFNEMRALGFEPDDISYVGLLSACSHA 400
Query: 259 GLVKEAWYFFDCLGKN 274
GLVKE +F L K+
Sbjct: 401 GLVKEGLSYFQELVKD 416
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 114/225 (50%), Gaps = 22/225 (9%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFD-GIPVKNLVSWNSMLDGYAKCGDI------SM 94
E D ++I Y R I AR++FD +KN+V+W +M+ GY + +
Sbjct: 83 ERDVITWTTVITGYIKCRLIVEARRLFDRADAMKNVVTWTAMVSGYMRLNQVLEAERVDE 142
Query: 95 ARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAH 154
AR++FD MP++DV+SW+ ++ G R G DEA +F++M P+ N V+ +++ A
Sbjct: 143 ARRLFDEMPKRDVISWTAMVAGLARNGRIDEARKIFDKM----PERNVVSWNAMITGYAK 198
Query: 155 LGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL--MKPSDVFI 212
L + + + + +LP + T + + L + R L M +V
Sbjct: 199 NMRLVEAFELFERMPERDLPSWNTMITGFIQ--------NKELKLARKLLDEMPEKNVVS 250
Query: 213 WNSMIGGFACHGLVKESLDLFSEM-HIVGVKPDEITYLNLLSACA 256
W +MI G+ G + +L++F EM GV P+E T++N+L AC+
Sbjct: 251 WTTMITGYVQEGESEAALNIFMEMIRDGGVMPNEGTFVNVLGACS 295
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 136/282 (48%), Gaps = 25/282 (8%)
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPE-QDVLSWSCLIDGYVR 119
I AR+VFD + +++++W +++ GY KC I AR++FD ++V++W+ ++ GY+R
Sbjct: 71 INEARQVFDRMLERDVITWTTVITGYIKCRLIVEARRLFDRADAMKNVVTWTAMVSGYMR 130
Query: 120 KGD------YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL 173
DEA +F+EM PK + ++ +++ A G +D+ R + D
Sbjct: 131 LNQVLEAERVDEARRLFDEM----PKRDVISWTAMVAGLARNGRIDEAR----KIFDKMP 182
Query: 174 PLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF 233
+V +++ YAK + EA +F M D+ WN+MI GF + +K + L
Sbjct: 183 ERNVVSWNAMITGYAKNMRLVEAFELFER--MPERDLPSWNTMITGFIQNKELKLARKLL 240
Query: 234 SEMHIVGVKPDEITYLNLLSACAHGGLVKEAW-YFFDCLGKNGMTPKSEHYACMVDV--- 289
EM V +++ +++ G + A F + + G+ P + ++
Sbjct: 241 DEMPEKNV----VSWTTMITGYVQEGESEAALNIFMEMIRDGGVMPNEGTFVNVLGACSD 296
Query: 290 MARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
+A G+ + +Q + + Q ++ AL+N G+LD+A
Sbjct: 297 LAGLGEGQQVHQMISKTVYQDMPFVVSALINMYSKCGELDMA 338
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 128/287 (44%), Gaps = 22/287 (7%)
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
G I+ ARQVFD M E+DV++W+ +I GY++ EA +F+ + N VT +++
Sbjct: 69 GKINEARQVFDRMLERDVITWTTVITGYIKCRLIVEARRLFDR---ADAMKNVVTWTAMV 125
Query: 150 CACAHLG-ALDKGRMMHHYVIDNELPLTLVLR-TSLVDMYAKCGAIQEALHVFRSGLMKP 207
L L+ R+ + +E+P V+ T++V A+ G I EA +F M
Sbjct: 126 SGYMRLNQVLEAERVDEARRLFDEMPKRDVISWTAMVAGLARNGRIDEARKIFDK--MPE 183
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYF 267
+V WN+MI G+A + + E+ +LF M + D ++ +++ +K A
Sbjct: 184 RNVVSWNAMITGYAKNMRLVEAFELFERMP----ERDLPSWNTMITGFIQNKELKLARKL 239
Query: 268 FDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI----PIQPTASMLGALLNGCM 323
D + + + + M+ + G+ A ++ + P +L C
Sbjct: 240 LDEMPEKNVV----SWTTMITGYVQEGESEAALNIFMEMIRDGGVMPNEGTFVNVLGACS 295
Query: 324 NHGKLDLAETVGRKLIELEPHQDGRYV--GLSNVYAIFRRWDKARSM 368
+ L + V ++I +QD +V L N+Y+ D AR M
Sbjct: 296 DLAGLGEGQQV-HQMISKTVYQDMPFVVSALINMYSKCGELDMARKM 341
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 33/159 (20%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
GV P+ TF + A + L G +H I+K Y+ FV ++LI+MYS ++ A
Sbjct: 279 GVMPNEGTFVNVLGACSDLAGLGEGQQVHQMISKTVYQDMPFVVSALINMYSKCGELDMA 338
Query: 65 RKVFDGIPV--KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
RK+FD ++LVSWN C++ Y G
Sbjct: 339 RKMFDNRTTSQRDLVSWN-------------------------------CMVAAYAHHGC 367
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
EA+ +F EMR G +P++++ V +L AC+H G + +G
Sbjct: 368 GKEAINLFNEMRALGFEPDDISYVGLLSACSHAGLVKEG 406
>30147.m013867 pentatricopeptide repeat-containing protein, putative
Length = 441
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 167/327 (51%), Gaps = 34/327 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML V D TFP KA + L R+ G IH I K G+ S+ V N+LIHMY
Sbjct: 117 MLEEAVAFDEFTFPCTLKACSRLRGRKEGKQIHAQIVKYGFGSNCIVLNTLIHMY----- 171
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
A CG+I +AR +FD M E+D+ +W+ + GYV+
Sbjct: 172 --------------------------ANCGEIEIARNMFDGMSERDIFAWNSMFSGYVKS 205
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G Y++ + +FEEMR G N++T++SVL AC L ++ G + YV N L + L
Sbjct: 206 GYYEDTVRLFEEMRELGVGFNDITLISVLAACGRLADVELGEWIAKYVRVNGLDRNMNLV 265
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T+LVDMYAKCG + +A +F M DV W++MI G++ +E++DLF+EM +
Sbjct: 266 TALVDMYAKCGEVDKARRLFDQ--MDGRDVVAWSAMISGYSQARRCQEAVDLFNEMQMAN 323
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
+ P+E+T +++LS CA G + + + + GM +VD + G V A
Sbjct: 324 LDPNEVTMVSVLSCCAALGALGTGKWIHLYIKRKGMNLTVTLGTALVDFYGKCGLVDSAI 383
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGK 327
+ +P++ S AL+ G N+G+
Sbjct: 384 EVFQLMPVKNVYSW-TALIQGLANNGQ 409
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 111/172 (64%), Gaps = 4/172 (2%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
NLV+ +++D YAKCG++ AR++FD M +DV++WS +I GY + EA+ +F EM+
Sbjct: 263 NLVT--ALVDMYAKCGEVDKARRLFDQMDGRDVVAWSAMISGYSQARRCQEAVDLFNEMQ 320
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
++ PNEVTMVSVL CA LGAL G+ +H Y+ + LT+ L T+LVD Y KCG +
Sbjct: 321 MANLDPNEVTMVSVLSCCAALGALGTGKWIHLYIKRKGMNLTVTLGTALVDFYGKCGLVD 380
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
A+ VF+ LM +V+ W ++I G A +G K +L+ + M V+P+++
Sbjct: 381 SAIEVFQ--LMPVKNVYSWTALIQGLANNGQGKRALEYYQLMRESNVEPNDV 430
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 106/212 (50%), Gaps = 2/212 (0%)
Query: 95 ARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAH 154
A +FD + D +++ +I + K +ALA F++M +E T L AC+
Sbjct: 79 ALSIFDNIDGPDSSAYNIMIRAFTLKRSPQKALAFFKQMLEEAVAFDEFTFPCTLKACSR 138
Query: 155 LGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWN 214
L +G+ +H ++ ++ +L+ MYA CG I+ A ++F M D+F WN
Sbjct: 139 LRGRKEGKQIHAQIVKYGFGSNCIVLNTLIHMYANCGEIEIARNMFDG--MSERDIFAWN 196
Query: 215 SMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN 274
SM G+ G ++++ LF EM +GV ++IT +++L+AC V+ + + N
Sbjct: 197 SMFSGYVKSGYYEDTVRLFEEMRELGVGFNDITLISVLAACGRLADVELGEWIAKYVRVN 256
Query: 275 GMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
G+ +VD+ A+ G+V +A + Q+
Sbjct: 257 GLDRNMNLVTALVDMYAKCGEVDKARRLFDQM 288
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
+++D Y KCG + A +VF LMP ++V SW+ LI G G AL ++ MR S +
Sbjct: 367 TALVDFYGKCGLVDSAIEVFQLMPVKNVYSWTALIQGLANNGQGKRALEYYQLMRESNVE 426
Query: 140 PNEVTMVSV 148
PN+V ++ V
Sbjct: 427 PNDVWLMKV 435
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P+ +T + A L G IH YI + G + +L+ Y + +A +V
Sbjct: 326 PNEVTMVSVLSCCAALGALGTGKWIHLYIKRKGMNLTVTLGTALVDFYGKCGLVDSAIEV 385
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDV 107
F +PVKN+ SW +++ G A G A + + LM E +V
Sbjct: 386 FQLMPVKNVYSWTALIQGLANNGQGKRALEYYQLMRESNV 425
>28470.m000433 pentatricopeptide repeat-containing protein, putative
Length = 718
Score = 181 bits (460), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 117/352 (33%), Positives = 179/352 (50%), Gaps = 38/352 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R DH+T L A + E+G HG+I + G+ S V N+L
Sbjct: 382 MRRTTEDIDHITLGLLLNVCAGISDVEMGKQAHGFIYRHGFSSCILVGNAL--------- 432
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPE-QDVLSWSCLIDGYVR 119
LD Y KCG++ AR F M + +D +SW+ L+ Y R
Sbjct: 433 ----------------------LDMYGKCGNLRSARVWFYQMSQSRDNISWNALLTSYAR 470
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
++A+ +F EM+ KP+ T ++L ACA++ ALD+G+ +H ++I N L V+
Sbjct: 471 HHQSEQAMMIFGEMQWE-TKPSTFTFGTLLAACANIFALDQGKEIHGFMIRNGYNLDTVI 529
Query: 180 RTSLVDMYAKCGAIQEALHVF-RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+LVDMY+KC + AL VF R+G DV +WNS+I G +G KE L LF +M
Sbjct: 530 SGALVDMYSKCRCLSYALTVFNRAG---SRDVILWNSIILGCCHNGRGKEVLKLFGQMEK 586
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVA 297
GVKPD +T+ +L AC + G VK A +F+ + K + P+ EHY CM+++ +R ++
Sbjct: 587 EGVKPDHVTFHGVLLACMYEGHVKLAVEYFNSMSDKCCVIPRLEHYECMIELFSRYRCMS 646
Query: 298 EAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRY 349
F+ +P PTASML + + C HG + V +L +L P ++
Sbjct: 647 RLENFVKGMPFDPTASMLIRVFDACKEHGPSRFRKWVAEQLNKLNPSISSQF 698
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 140/259 (54%), Gaps = 6/259 (2%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKREL--GLAIHGYITKAGYESDRFVSNSLIHMYSSF 58
M + V P L F F AC R L G+ IH + K +E D VS+SL +MY+
Sbjct: 250 MFQTDVRP--LNFTFSNALIACSAMRALNEGMQIHAFAIKIKFEEDEAVSSSLSNMYAKC 307
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
+ +AR +FD ++++SW SM+ YA G AR++F+ MPE V+SW+ ++ GY+
Sbjct: 308 GKLESARMIFDQHGSRDVISWTSMVSAYALSGRTREARELFEKMPEWSVVSWNAMLAGYI 367
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
R ++EAL MR + + +T+ +L CA + ++ G+ H ++ + ++
Sbjct: 368 RSLQWEEALDFVCLMRRTTEDIDHITLGLLLNVCAGISDVEMGKQAHGFIYRHGFSSCIL 427
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+ +L+DMY KCG ++ A V+ + + D WN+++ +A H ++++ +F EM
Sbjct: 428 VGNALLDMYGKCGNLRSA-RVWFYQMSQSRDNISWNALLTSYARHHQSEQAMMIFGEMQW 486
Query: 239 VGVKPDEITYLNLLSACAH 257
KP T+ LL+ACA+
Sbjct: 487 -ETKPSTFTFGTLLAACAN 504
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 111/211 (52%), Gaps = 6/211 (2%)
Query: 50 SLIHMYSSFRDIPNARKVFDGI----PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ 105
SL + SS I ARK+ + P + N ++ Y KC + AR++FD MP++
Sbjct: 62 SLFQLCSSTLSIVEARKIESHLITFNPTPPIFLLNRAIETYGKCECLKDARELFDEMPQR 121
Query: 106 DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMH 165
D SW+ +I Y + G ++AL +F++M G NE+T SVL +C+ + L R +H
Sbjct: 122 DGGSWNAIIKAYTQCGYAEKALGLFKDMNKEGVFANEITFASVLKSCSDVLDLSLSRQIH 181
Query: 166 HYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGL 225
++ ++L ++LVD+Y KC + EA +F + +DV WN ++ + G
Sbjct: 182 GLIVKCGFCGNVILGSALVDVYGKCKVMSEARLMFNE-IENCNDV-TWNVIVRRYLDVGN 239
Query: 226 VKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
+E++ +F +M V+P T+ N L AC+
Sbjct: 240 EREAVKMFFKMFQTDVRPLNFTFSNALIACS 270
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 113/236 (47%), Gaps = 33/236 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + GVF + +TF + K+ + +L L IHG I K G+
Sbjct: 149 MNKEGVFANEITFASVLKSCSDVLDLSLSRQIHGLIVKCGF------------------- 189
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
N++ ++++D Y KC +S AR +F+ + + ++W+ ++ Y+
Sbjct: 190 ------------CGNVILGSALVDVYGKCKVMSEARLMFNEIENCNDVTWNVIVRRYLDV 237
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G+ EA+ +F +M + +P T + L AC+ + AL++G +H + I + +
Sbjct: 238 GNEREAVKMFFKMFQTDVRPLNFTFSNALIACSAMRALNEGMQIHAFAIKIKFEEDEAVS 297
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
+SL +MYAKCG ++ A +F DV W SM+ +A G +E+ +LF +M
Sbjct: 298 SSLSNMYAKCGKLESARMIFDQ--HGSRDVISWTSMVSAYALSGRTREARELFEKM 351
>29841.m002889 pentatricopeptide repeat-containing protein, putative
Length = 628
Score = 181 bits (459), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 152/278 (54%), Gaps = 9/278 (3%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAG-YESDRFVSNSLIHMYSSFR 59
M+ G PD +T + A A L + GL IH + K D +SN+L+ MY+
Sbjct: 243 MMESGFEPDEVTLASVVSACASLAAAKQGLEIHACVVKRDKLRDDLILSNALVDMYAKCG 302
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
I AR VFD +P++N+VS SM+ GYAK + AR +F M E++V+SW+ LI GY +
Sbjct: 303 RINEARCVFDRMPIRNVVSETSMVSGYAKTASVKAARLLFTKMIERNVVSWNALIAGYTQ 362
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT--- 176
G+ +EAL +F ++ P T ++L ACA+L L GR H +V+ +
Sbjct: 363 NGENEEALRLFRMLKREAICPTHYTFGNLLNACANLADLQLGRQAHAHVLKHGFRFQYGE 422
Query: 177 ---LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF 233
+ + +L+DMY KCG+++E +F + M D WN+MI G+A +G E+L LF
Sbjct: 423 ESDVFVGNALIDMYMKCGSVEEGCRIFEN--MVERDYVSWNAMIVGYAQNGYGMEALGLF 480
Query: 234 SEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL 271
+M G KPD +T + L AC+H GLV+E F +
Sbjct: 481 RKMLASGEKPDHVTMIGALCACSHAGLVQEGRKHFSSM 518
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 171/330 (51%), Gaps = 6/330 (1%)
Query: 14 PFLAKASACLLKREL--GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGI 71
PF +CL + L IH I K + + F+ N LI Y +ARK+FD +
Sbjct: 21 PFAKLLDSCLKSKSLRDTRRIHARIIKTQFAYEVFIQNRLIDAYGKCGCFDDARKIFDQM 80
Query: 72 PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFE 131
P KN+ SWN+++ K G + ++F MPE D SW+ LI G+ + ++EAL F
Sbjct: 81 PEKNVFSWNAIVSTLVKSGFLDEGARLFVSMPEPDQCSWNSLIAGFAQHDRFEEALNYFV 140
Query: 132 EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG 191
+M G NE T S L ACA L L G +H ++ ++ L + + ++L+D+Y+KCG
Sbjct: 141 KMHRKGFVLNEYTFGSGLSACAGLKDLKIGTQIHGLMLKSQFLLDVYMGSALIDIYSKCG 200
Query: 192 AIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
+ A VF G+M+ +V WNS+I + +G +E+L++F M G +PDE+T ++
Sbjct: 201 FVDCAQRVF-DGMME-RNVVSWNSLITCYEQNGPSREALEIFMRMMESGFEPDEVTLASV 258
Query: 252 LSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQP 310
+SACA K+ C+ K + + +VD+ A+ G++ EA ++PI+
Sbjct: 259 VSACASLAAAKQGLEIHACVVKRDKLRDDLILSNALVDMYAKCGRINEARCVFDRMPIRN 318
Query: 311 TASMLGALLNGCMNHGKLDLAETVGRKLIE 340
S ++++G + A + K+IE
Sbjct: 319 VVSET-SMVSGYAKTASVKAARLLFTKMIE 347
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 135/287 (47%), Gaps = 61/287 (21%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R G + TF A A L ++G IHG + K+ + D ++ ++LI +YS
Sbjct: 142 MHRKGFVLNEYTFGSGLSACAGLKDLKIGTQIHGLMLKSQFLLDVYMGSALIDIYSKCGF 201
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A++VFDG+ +N+VSWNS LI Y +
Sbjct: 202 VDCAQRVFDGMMERNVVSWNS-------------------------------LITCYEQN 230
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID-NELPLTLVL 179
G EAL +F M SG +P+EVT+ SV+ ACA L A +G +H V+ ++L L+L
Sbjct: 231 GPSREALEIFMRMMESGFEPDEVTLASVVSACASLAAAKQGLEIHACVVKRDKLRDDLIL 290
Query: 180 RTSLVDMYAKCGAIQEALHVFR--------------SGLMKPS---------------DV 210
+LVDMYAKCG I EA VF SG K + +V
Sbjct: 291 SNALVDMYAKCGRINEARCVFDRMPIRNVVSETSMVSGYAKTASVKAARLLFTKMIERNV 350
Query: 211 FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
WN++I G+ +G +E+L LF + + P T+ NLL+ACA+
Sbjct: 351 VSWNALIAGYTQNGENEEALRLFRMLKREAICPTHYTFGNLLNACAN 397
>29830.m001393 pentatricopeptide repeat-containing protein, putative
Length = 574
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 155/277 (55%), Gaps = 6/277 (2%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKA-GYESDRF---VSNSLIHMYS 56
M G+ D T+ + A A + G +H YI K S F V+N+L+ +Y
Sbjct: 284 MYLAGLKLDEFTYTSIISACANAGFLQHGKQVHAYILKTEAMPSPDFSLPVNNALVTLYW 343
Query: 57 SFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDG 116
+ A++VF+ +PV++LVSWN++L GY G + A+ F+ MPE+++LSW +I G
Sbjct: 344 KCGKVDEAQEVFNNMPVRDLVSWNTILSGYLNAGRMDEAKTFFEEMPEKNILSWVVMISG 403
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
+ G +E L +F +M++ G +P + + +C+ LG L+ GR +H ++ +
Sbjct: 404 LAQNGFGEEGLKLFNQMKLRGFEPCDYAFAGAITSCSMLGLLEHGRQLHAQLVRFGFDSS 463
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
L +L+ MYA+CG ++ A +F S M D WN+MI HG ++++LF EM
Sbjct: 464 LSAGNALITMYARCGVVEAARTLFLS--MPCVDSVSWNAMIAALGQHGYGVQAIELFEEM 521
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK 273
I G+ PD IT+L +LSAC+H GLVKE +F+ + +
Sbjct: 522 LIEGILPDRITFLTVLSACSHAGLVKEGHRYFNSMSR 558
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 175/369 (47%), Gaps = 44/369 (11%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLA-IHGYITKAGYESDRFVSNSLIHMY---- 55
M R PD+ TF + A A + + E +H + K+G V N+LI +Y
Sbjct: 142 MKRNDFRPDNFTFTSVLGALALVAENERHCQQLHCTVVKSGTWFVTSVLNALISVYVKCA 201
Query: 56 -----SSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSW 110
S + AR++FD +PV++ +SW +++ GY K D+ AR+VFD M E+ V+ W
Sbjct: 202 SSPSVISSSLMGAARRLFDEMPVRDELSWTTIITGYVKNDDLDAAREVFDGMREKLVVVW 261
Query: 111 SCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID 170
+ +I GY+ +G Y EAL +F +M ++G K +E T S++ ACA+ G L G+ +H Y++
Sbjct: 262 NAMISGYMHRGLYQEALEMFRKMYLAGLKLDEFTYTSIISACANAGFLQHGKQVHAYILK 321
Query: 171 NE-LP---LTLVLRTSLVDMYAKCGAIQEALHVF-------------------RSGLMKP 207
E +P +L + +LV +Y KCG + EA VF +G M
Sbjct: 322 TEAMPSPDFSLPVNNALVTLYWKCGKVDEAQEVFNNMPVRDLVSWNTILSGYLNAGRMDE 381
Query: 208 SDVFI----------WNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
+ F W MI G A +G +E L LF++M + G +P + + +++C+
Sbjct: 382 AKTFFEEMPEKNILSWVVMISGLAQNGFGEEGLKLFNQMKLRGFEPCDYAFAGAITSCSM 441
Query: 258 GGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGA 317
GL++ L + G ++ + AR G V A +P + S A
Sbjct: 442 LGLLEHGRQLHAQLVRFGFDSSLSAGNALITMYARCGVVEAARTLFLSMPCVDSVSW-NA 500
Query: 318 LLNGCMNHG 326
++ HG
Sbjct: 501 MIAALGQHG 509
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 168/355 (47%), Gaps = 46/355 (12%)
Query: 31 AIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCG 90
IH ++ +G++ N LI++Y + AR +FD IP ++V+ ++++ Y+ G
Sbjct: 38 TIHAHMIASGFKPHGHTLNRLIYIYCKSSKLSYARSLFDEIPQPDIVARTTLINAYSATG 97
Query: 91 DISMARQVFDLMP--EQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
+ +A+++F P +D + ++ +I Y D A+ +F +M+ + +P+ T SV
Sbjct: 98 HLKLAKEMFYETPLIMRDAVIYNAMITAYSHNNDGHAAIELFCDMKRNDFRPDNFTFTSV 157
Query: 149 LCACAHLGALDKG-RMMHHYVIDNELPLTLVLRTSLVDMYAKC------------GAIQE 195
L A A + ++ + +H V+ + + +L+ +Y KC GA +
Sbjct: 158 LGALALVAENERHCQQLHCTVVKSGTWFVTSVLNALISVYVKCASSPSVISSSLMGAARR 217
Query: 196 -----------ALHVFRSGLMKPSD---------------VFIWNSMIGGFACHGLVKES 229
+ +G +K D V +WN+MI G+ GL +E+
Sbjct: 218 LFDEMPVRDELSWTTIITGYVKNDDLDAAREVFDGMREKLVVVWNAMISGYMHRGLYQEA 277
Query: 230 LDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHY----AC 285
L++F +M++ G+K DE TY +++SACA+ G ++ + K P +
Sbjct: 278 LEMFRKMYLAGLKLDEFTYTSIISACANAGFLQHGKQVHAYILKTEAMPSPDFSLPVNNA 337
Query: 286 MVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
+V + + G+V EA + +P++ S +L+G +N G++D A+T ++ E
Sbjct: 338 LVTLYWKCGKVDEAQEVFNNMPVRDLVSW-NTILSGYLNAGRMDEAKTFFEEMPE 391
>30147.m014128 pentatricopeptide repeat-containing protein, putative
Length = 438
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 155/298 (52%), Gaps = 33/298 (11%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMY------------ 55
PD +F F+ KA+A L G+ +H K G + FV +LI MY
Sbjct: 104 PDSFSFAFVLKAAAYLRSLRGGIQLHCQAWKYGLNAHLFVGTTLISMYGECGCVGYARQV 163
Query: 56 -----------------SSFR--DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMAR 96
+ FR D+ A K+F + ++L SWN ML GY K G++ +AR
Sbjct: 164 FGEMHEPNVIAWNAVIAACFRGGDVKEAGKMFSLMVFRDLTSWNVMLAGYVKIGELQLAR 223
Query: 97 QVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLG 156
++F M +D +SWS +I G+ G +DEA F E+ G +PNEV++ VL ACA G
Sbjct: 224 EMFLEMAVKDDVSWSTMIVGFAHNGCFDEAFGYFRELLRKGTRPNEVSLTGVLSACAQAG 283
Query: 157 ALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSM 216
A + G+++H ++ L + + +L+D Y+KCG + A VF K S + W SM
Sbjct: 284 AFEFGKILHGFIEKAGLLWIISVNNALLDTYSKCGNLGMAQLVFERMPEKKS-IISWTSM 342
Query: 217 IGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKE-AWYFFDCLGK 273
+ A HGL +E++ LF EM G +PDEIT++ LL AC+H GLV++ +W G
Sbjct: 343 MACLAMHGLGEEAIKLFHEMEEYGTRPDEITFILLLYACSHAGLVEQGSWSVLGAAGN 400
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 116/281 (41%), Gaps = 33/281 (11%)
Query: 91 DISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRV-SGPKPNEVTMVSVL 149
I A +F P DV ++ LI G +++A F E+R S P+ + VL
Sbjct: 54 SIDYALSLFRDTPNPDVFMYNTLIRGLAESDSPQKSIATFLELRKESALSPDSFSFAFVL 113
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
A A+L +L G +H L L + T+L+ MY +CG + A VF G M +
Sbjct: 114 KAAAYLRSLRGGIQLHCQAWKYGLNAHLFVGTTLISMYGECGCVGYARQVF--GEMHEPN 171
Query: 210 VFIWNSMIGGFACHGLVKESLDLFS---------------------------EMHIVGVK 242
V WN++I G VKE+ +FS EM +
Sbjct: 172 VIAWNAVIAACFRGGDVKEAGKMFSLMVFRDLTSWNVMLAGYVKIGELQLAREMFLEMAV 231
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA--- 299
D++++ ++ AH G EA+ +F L + G P ++ A+AG
Sbjct: 232 KDDVSWSTMIVGFAHNGCFDEAFGYFRELLRKGTRPNEVSLTGVLSACAQAGAFEFGKIL 291
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
+ F+ + + S+ ALL+ G L +A+ V ++ E
Sbjct: 292 HGFIEKAGLLWIISVNNALLDTYSKCGNLGMAQLVFERMPE 332
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 32/162 (19%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+LR G P+ ++ + A A E G +HG+I KAG V+N+L+ YS +
Sbjct: 260 LLRKGTRPNEVSLTGVLSACAQAGAFEFGKILHGFIEKAGLLWIISVNNALLDTYSKCGN 319
Query: 61 IPNARKVFDGIP-VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
+ A+ VF+ +P K+++SW SM+ +CL
Sbjct: 320 LGMAQLVFERMPEKKSIISWTSMM---------------------------ACL----AM 348
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
G +EA+ +F EM G +P+E+T + +L AC+H G +++G
Sbjct: 349 HGLGEEAIKLFHEMEEYGTRPDEITFILLLYACSHAGLVEQG 390
>29813.m001493 pentatricopeptide repeat-containing protein, putative
Length = 290
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 172/334 (51%), Gaps = 46/334 (13%)
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
Y +C D+ R+VFD + E V+S++ +I Y R +EALA+F +++ KP +V M
Sbjct: 2 YTECNDVDGTRRVFDKILEPCVISYNAIIMIYARSNRPNEALALFRKLQAKKLKPTDVIM 61
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
+SVL +CA LGALD G+ ++ YV N + + T+L+ MYAKCG++ +A+ F++ +
Sbjct: 62 LSVLLSCAFLGALDLGKWVNEYVKKNGFDKYVKVNTALISMYAKCGSLDDAISAFQNMRV 121
Query: 206 KPSDVFIWNSMIGGFACH-GLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEA 264
K ++ CH GLV E L
Sbjct: 122 KHTE-----------TCHTGLVDEGLG--------------------------------- 137
Query: 265 WYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMN 324
YF+ G+ P+ +HY C VD+++RAG + EAY+F+ +PI+P + LL+ C +
Sbjct: 138 -YFYSMSDSYGIMPRIKHYGCTVDLLSRAGHLDEAYKFVDGLPIKPIPILWRTLLSACSS 196
Query: 325 HGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYS 384
HG L+L + V ++ EL+ G YV LSN+ A +W+ S+R+ M G K PG S
Sbjct: 197 HGNLELGKQVLERIFELDDSHGGDYVILSNMCARAGKWEDVDSLRKLMIDRGAVKIPGCS 256
Query: 385 FVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQ 418
+E++ +H F + + S I+ L +V +
Sbjct: 257 LIEVNSVVHEFFSGEGVQYVSITIHEALDELVEE 290
>29742.m001443 pentatricopeptide repeat-containing protein, putative
Length = 695
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 165/301 (54%), Gaps = 9/301 (2%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G IHGY+ K ES+ ++SNSLI MYS I +R+VFD + NL SWNS++ Y
Sbjct: 285 GKQIHGYVIKHALESNLWISNSLISMYSRNGKIILSRRVFDSMKDHNLSSWNSIISSYTA 344
Query: 89 CGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVT 144
G ++ A ++F M D+++W+CL+ G+ G Y E L + ++M+V+G +PN +
Sbjct: 345 LGYLNGAWKLFHEMESSSVKPDIITWNCLLSGHALHGSYKEVLMILQKMQVTGFRPNSSS 404
Query: 145 MVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL 204
+ SVL L L G+ +H YVI N L L + SL+DMY K + + VF +
Sbjct: 405 ITSVLQTVTELRLLKIGKGIHGYVIRNRLNPDLYVEASLLDMYVKNNCLATSQAVFDN-- 462
Query: 205 MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEA 264
MK ++ WNS+I G+A GL ++ L ++M G++ D +T+ L+S + G +EA
Sbjct: 463 MKNRNIVAWNSLITGYAYKGLFDDAKRLLNKMKEEGIRADIVTWNGLVSGYSIWGHNEEA 522
Query: 265 WYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNG 321
+ + +G+TP + ++ ++ G E+ +F Q+ I+P ++ + +LL
Sbjct: 523 LAVINEIKSSGLTPNVVSWTALISGCSQNGNYKESLEFFIQMQQEGIKPNSTTVSSLLKT 582
Query: 322 C 322
C
Sbjct: 583 C 583
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 144/298 (48%), Gaps = 41/298 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G P+ + + + L ++G IHGY+ + D +V SL+ MY
Sbjct: 393 MQVTGFRPNSSSITSVLQTVTELRLLKIGKGIHGYVIRNRLNPDLYVEASLLDMYVKNNC 452
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ--------------- 105
+ ++ VFD + +N+V+WNS++ GYA G A+++ + M E+
Sbjct: 453 LATSQAVFDNMKNRNIVAWNSLITGYAYKGLFDDAKRLLNKMKEEGIRADIVTWNGLVSG 512
Query: 106 ------------------------DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN 141
+V+SW+ LI G + G+Y E+L F +M+ G KPN
Sbjct: 513 YSIWGHNEEALAVINEIKSSGLTPNVVSWTALISGCSQNGNYKESLEFFIQMQQEGIKPN 572
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR 201
T+ S+L C L L KG+ +H + + + + T+LVDMY+K G ++ A VF+
Sbjct: 573 STTVSSLLKTCGGLSLLKKGKEIHCLSVKSGFTGDIYIATALVDMYSKSGNLKSAREVFK 632
Query: 202 SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
K + WN MI GFA +GL KE++ L+ EM G+ PD IT+ LLSAC +
Sbjct: 633 R--TKNKTLACWNCMIMGFAIYGLGKEAISLYDEMLGAGILPDSITFTALLSACKNSA 688
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 120/265 (45%), Gaps = 33/265 (12%)
Query: 28 LGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYA 87
LGL +H + K G+E D +V ++L L Y
Sbjct: 183 LGLEVHASLIKRGFELDTYVRSAL-------------------------------LSYYE 211
Query: 88 KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
+C + +A QVF MP++D L W+ I ++ + A+ +F M+ S K + T++
Sbjct: 212 RCWSLEIANQVFHDMPDRDGLFWNEAIMINLKNERFGNAIELFRGMQFSFAKADASTVLK 271
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP 207
+L AC AL++G+ +H YVI + L L + SL+ MY++ G I + VF S MK
Sbjct: 272 MLQACGKEEALNEGKQIHGYVIKHALESNLWISNSLISMYSRNGKIILSRRVFDS--MKD 329
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYF 267
++ WNS+I + G + + LF EM VKPD IT+ LLS A G KE
Sbjct: 330 HNLSSWNSIISSYTALGYLNGAWKLFHEMESSSVKPDIITWNCLLSGHALHGSYKEVLMI 389
Query: 268 FDCLGKNGMTPKSEHYACMVDVMAR 292
+ G P S ++ +
Sbjct: 390 LQKMQVTGFRPNSSSITSVLQTVTE 414
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 87/210 (41%), Gaps = 20/210 (9%)
Query: 73 VKNLVSWNS------MLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR-KGDYDE 125
+K WNS ++ Y + GD + VF + ++ + WS ++ + GD +
Sbjct: 89 IKTCSMWNSDSNARTLITSYLELGDFRSSAMVFFVGFARNYVMWSSFMEEFENCGGDPIQ 148
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
L VF+E+ G + + VL C + L G +H +I L +R++L+
Sbjct: 149 VLNVFKELHSKGVTFDSGMVTVVLKICIRVMDLWLGLEVHASLIKRGFELDTYVRSALLS 208
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
Y +C +++ A VF M D WN I + +++LF M K D
Sbjct: 209 YYERCWSLEIANQVFHD--MPDRDGLFWNEAIMINLKNERFGNAIELFRGMQFSFAKADA 266
Query: 246 ITYLNLLSACA-----------HGGLVKEA 264
T L +L AC HG ++K A
Sbjct: 267 STVLKMLQACGKEEALNEGKQIHGYVIKHA 296
>30169.m006579 pentatricopeptide repeat-containing protein, putative
Length = 777
Score = 178 bits (451), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 186/377 (49%), Gaps = 34/377 (9%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M VGV P+ T + + + + L +HG+I K + D V N+L+
Sbjct: 414 MRTVGVQPNSFTLSIVLRVCSAIKSPYQTLKLHGHIIKTKADYDVVVGNALV-------- 465
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
D YA G + A +V M ++D ++++ L +
Sbjct: 466 -----------------------DAYAGSGRVDDAWRVVKDMNQRDSITYTSLATRLNQM 502
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G ++ AL+V M + K + ++ A A LG ++ G+ +H Y + + L L +
Sbjct: 503 GYHELALSVISHMFNADVKIDGFSLTCFFSASASLGRIETGKQLHCYSLKSGLSCCLSVA 562
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
L+D+Y K G + EA F + + +P DV WN +I G A +G + +L F +M + G
Sbjct: 563 NGLIDLYGKYGLVHEARRAF-TEITEP-DVVSWNGLISGLASNGHISSALSAFDDMRLRG 620
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAEA 299
++PD IT+L +LS C+HGGLV +F + + + + P+S+HY C+VD++ RAG++ EA
Sbjct: 621 IQPDSITFLLVLSTCSHGGLVDMGLQYFHSMREMHDVEPQSDHYVCLVDILGRAGRLEEA 680
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+ +P++P AS+ LL C H ++L E V R+ +EL P ++ L +Y
Sbjct: 681 MNIIETMPLEPDASIYKTLLAACSIHRNMNLGEDVARRGLELNPLDPAFHLLLVKLYDDC 740
Query: 360 RRWDKARSMREAMERMG 376
R+D R ++++ G
Sbjct: 741 GRYDLGEKTRRSIKQKG 757
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 126/241 (52%), Gaps = 25/241 (10%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
NLV ++++ Y++C I A +V L PE DV+ W+ +I G + + EA+A F +M
Sbjct: 254 NLVLKTALVNMYSRCQRIEDAIKVSKLTPEYDVILWTAIISGLAQNMKFQEAVAAFHKME 313
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
+SG + T +S+L C + +LD GR +H VI L + + +LVDMY KC I
Sbjct: 314 ISGVSASNFTYLSMLSVCISILSLDLGRQIHSRVIRTGLEDDVPVGNALVDMYMKCSCIV 373
Query: 195 E-ALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
E L +FR +K +V W S+I GFA HG ++SL+LF EM VGV+P+ T +L
Sbjct: 374 EHGLRMFRG--IKSPNVISWTSLIAGFAEHGFQQDSLNLFMEMRTVGVQPNSFTLSIVLR 431
Query: 254 ACA-----------HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQF 302
C+ HG ++K + +G +VD A +G+V +A++
Sbjct: 432 VCSAIKSPYQTLKLHGHIIKTKADYDVVVGN-----------ALVDAYAGSGRVDDAWRV 480
Query: 303 L 303
+
Sbjct: 481 V 481
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 126/255 (49%), Gaps = 34/255 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G +P+ TF + ++ L G IH K G+ES++ + +SLI +YS F
Sbjct: 111 MVLSGPYPNAFTFSSILRSCFALGDFSYGKRIHASSIKHGFESNQILGSSLIDLYSRFDS 170
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+A K+F + + VSW +++ A C V+
Sbjct: 171 TEDACKLFSYMDSGDTVSWTTVI---ASC----------------------------VQA 199
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G AL ++ EM + NE T V +L A + +G L G+++H + I + L LVL+
Sbjct: 200 GKCSHALRIYMEMLEAQVSSNEFTFVRLLAASSFIG-LQYGKLIHAHAIVLGVKLNLVLK 258
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T+LV+MY++C I++A+ V S L DV +W ++I G A + +E++ F +M I G
Sbjct: 259 TALVNMYSRCQRIEDAIKV--SKLTPEYDVILWTAIISGLAQNMKFQEAVAAFHKMEISG 316
Query: 241 VKPDEITYLNLLSAC 255
V TYL++LS C
Sbjct: 317 VSASNFTYLSMLSVC 331
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 2/173 (1%)
Query: 88 KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
KC + ARQ FD MP +DV+SW+ ++ +++ ++EAL +F+ M +SGP PN T S
Sbjct: 66 KCFSVEHARQFFDEMPCRDVVSWTGILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSS 125
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP 207
+L +C LG G+ +H I + +L +SL+D+Y++ + ++A +F M
Sbjct: 126 ILRSCFALGDFSYGKRIHASSIKHGFESNQILGSSLIDLYSRFDSTEDACKLF--SYMDS 183
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGL 260
D W ++I G +L ++ EM V +E T++ LL+A + GL
Sbjct: 184 GDTVSWTTVIASCVQAGKCSHALRIYMEMLEAQVSSNEFTFVRLLAASSFIGL 236
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 135/323 (41%), Gaps = 37/323 (11%)
Query: 12 TFPFLAKASACL--LKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDI-PNARKVF 68
F +L+ S C+ L +LG IH + + G E D V N+L+ MY I + ++F
Sbjct: 321 NFTYLSMLSVCISILSLDLGRQIHSRVIRTGLEDDVPVGNALVDMYMKCSCIVEHGLRMF 380
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
GI N V+SW+ LI G+ G ++L
Sbjct: 381 RGIKSPN-------------------------------VISWTSLIAGFAEHGFQQDSLN 409
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
+F EMR G +PN T+ VL C+ + + + +H ++I + +V+ +LVD YA
Sbjct: 410 LFMEMRTVGVQPNSFTLSIVLRVCSAIKSPYQTLKLHGHIIKTKADYDVVVGNALVDAYA 469
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
G + +A V + M D + S+ G + +L + S M VK D +
Sbjct: 470 GSGRVDDAWRVVKD--MNQRDSITYTSLATRLNQMGYHELALSVISHMFNADVKIDGFSL 527
Query: 249 LNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPI 308
SA A G ++ K+G++ ++D+ + G V EA + +I
Sbjct: 528 TCFFSASASLGRIETGKQLHCYSLKSGLSCCLSVANGLIDLYGKYGLVHEARRAFTEIT- 586
Query: 309 QPTASMLGALLNGCMNHGKLDLA 331
+P L++G ++G + A
Sbjct: 587 EPDVVSWNGLISGLASNGHISSA 609
>29851.m002415 pentatricopeptide repeat-containing protein, putative
Length = 386
Score = 177 bits (450), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 145/268 (54%), Gaps = 33/268 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML + P TF + K+ A L +LG +HG++ G+ D +V +L+ Y
Sbjct: 102 MLLSDISPSAYTFTSIVKSCADLSSLKLGKVVHGHVLVNGFGLDVYVQAALVACY----- 156
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AK GD+ AR+VFD M E+ V+SW+ +I GY +
Sbjct: 157 --------------------------AKSGDLGNARKVFDKMRERSVVSWNSIISGYEQN 190
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G EA+ +F++MR G +P+ T V VL ACA LGAL G +H Y I + L L +VL
Sbjct: 191 GFGREAIRLFKKMREEGFEPDSATFVIVLSACAQLGALSMGCWVHKYTIGHGLDLNVVLG 250
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
TSL++MY +CG + +A VF S MK +V W +MI G+ +G ++++ LF EM G
Sbjct: 251 TSLINMYTRCGTVTKAREVFDS--MKEKNVVTWTAMISGYGTNGHGRQAVQLFDEMKRRG 308
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFF 268
P+ +T++ +LSACAH GLVKE W F
Sbjct: 309 PCPNSVTFVAVLSACAHAGLVKEGWQVF 336
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 110/224 (49%), Gaps = 5/224 (2%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD-EALAVFEEMRVSGP 138
+L+ G I RQ+F + D ++ LI + + +L + M +S
Sbjct: 48 TKLLNLACAAGSIIYTRQIFLSVANPDSFLFNTLIKSTSKFHKFSIYSLFFYNCMLLSDI 107
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
P+ T S++ +CA L +L G+++H +V+ N L + ++ +LV YAK G + A
Sbjct: 108 SPSAYTFTSIVKSCADLSSLKLGKVVHGHVLVNGFGLDVYVQAALVACYAKSGDLGNARK 167
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH- 257
VF M+ V WNS+I G+ +G +E++ LF +M G +PD T++ +LSACA
Sbjct: 168 VFDK--MRERSVVSWNSIISGYEQNGFGREAIRLFKKMREEGFEPDSATFVIVLSACAQL 225
Query: 258 GGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQ 301
G L W +G +G+ ++++ R G V +A +
Sbjct: 226 GALSMGCWVHKYTIG-HGLDLNVVLGTSLINMYTRCGTVTKARE 268
>29813.m001482 pentatricopeptide repeat-containing protein, putative
Length = 556
Score = 177 bits (449), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 152/273 (55%), Gaps = 33/273 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M +GV P+ TF + A L K E G +HG++ G + V+NS+I +YS
Sbjct: 308 MQEIGVSPNDFTFAAVISGCANLGKTEWGEQLHGHMLCLGLMTFLSVANSVITLYS---- 363
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
KCG + A VF + +DV+SWS +I GY +
Sbjct: 364 ---------------------------KCGQLKSASMVFKELTRRDVVSWSTIIAGYSQG 396
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +EA MR GPKPNE+T+ SVL C ++ L++G+ +H + + L T +++
Sbjct: 397 GCAEEAFEYLSRMRREGPKPNELTLASVLSVCGNMAILEQGKQLHAHALHVGLEQTAMIQ 456
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
++L++MY+KCG+I+EA +F + +D+ W +MI G+A HG +E++DLF ++ +G
Sbjct: 457 SALINMYSKCGSIKEASKIFDEA--ENNDIVSWTAMINGYAEHGCRQEAIDLFEKIPRIG 514
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK 273
+KPD +T++ +L+AC+H GLV +++F+ + K
Sbjct: 515 LKPDPVTFIGVLTACSHAGLVDLGFHYFNSMSK 547
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 160/347 (46%), Gaps = 38/347 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R V D TF KA A L + G IH K E+ FV+N+L MY+
Sbjct: 207 MWRSKVVCDSYTFAIALKACANLGALDHGRQIHCQALKRSLEASSFVANTLATMYN---- 262
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
KCG + ++F+ M ++V+SW+ +I Y +
Sbjct: 263 ---------------------------KCGKLDYGSRLFEKMTIRNVVSWTMIITTYTQS 295
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G + AL F M+ G PN+ T +V+ CA+LG + G +H +++ L L +
Sbjct: 296 GQEENALRAFIRMQEIGVSPNDFTFAAVISGCANLGKTEWGEQLHGHMLCLGLMTFLSVA 355
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
S++ +Y+KCG ++ A VF+ + DV W+++I G++ G +E+ + S M G
Sbjct: 356 NSVITLYSKCGQLKSASMVFKE--LTRRDVVSWSTIIAGYSQGGCAEEAFEYLSRMRREG 413
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
KP+E+T ++LS C + ++++ G+ + + ++++ ++ G + EA
Sbjct: 414 PKPNELTLASVLSVCGNMAILEQGKQLHAHALHVGLEQTAMIQSALINMYSKCGSIKEAS 473
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHG----KLDLAETVGRKLIELEP 343
+ + S A++NG HG +DL E + R ++ +P
Sbjct: 474 KIFDEAENNDIVSWT-AMINGYAEHGCRQEAIDLFEKIPRIGLKPDP 519
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 109/261 (41%), Gaps = 35/261 (13%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ D K L G ++HGY K+ + FV ++L+ MY F I
Sbjct: 110 GLRMDPFILSLALKICGLSLNESYGESLHGYSVKSDFVDSVFVGSALVDMYMKFDKIQQG 169
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
++F +P++N+VSW + +I G+V G
Sbjct: 170 CQIFHAMPIRNVVSWTA-------------------------------IITGFVHAGYSK 198
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
E L F +M S + T L ACA+LGALD GR +H + L + + +L
Sbjct: 199 EGLVYFSQMWRSKVVCDSYTFAIALKACANLGALDHGRQIHCQALKRSLEASSFVANTLA 258
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
MY KCG + +F M +V W +I + G + +L F M +GV P+
Sbjct: 259 TMYNKCGKLDYGSRLFEK--MTIRNVVSWTMIITTYTQSGQEENALRAFIRMQEIGVSPN 316
Query: 245 EITYLNLLSACAHGGLVKEAW 265
+ T+ ++S CA+ G K W
Sbjct: 317 DFTFAAVISGCANLG--KTEW 335
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 141/319 (44%), Gaps = 44/319 (13%)
Query: 56 SSFRDIPNARKVFDGIPVK-------NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
+ +RD+ A V + + K N++ NS L K G + ARQ+FD MP +D +
Sbjct: 21 TDYRDLSVAYSVPNNLSHKTQPSNLINMLEINSKLKALVKTGCLQDARQMFDEMPHRDEI 80
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHY 167
SW+ +I GYV D EAL +F +M V G + + + L C G +H Y
Sbjct: 81 SWTTIISGYVNAIDTTEALTLFSKMWVVPGLRMDPFILSLALKICGLSLNESYGESLHGY 140
Query: 168 VIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
+ ++ ++ + ++LVDMY K IQ+ +F + M +V W ++I GF G K
Sbjct: 141 SVKSDFVDSVFVGSALVDMYMKFDKIQQGCQIFHA--MPIRNVVSWTAIITGFVHAGYSK 198
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVK--------------EAWYF------ 267
E L FS+M V D T+ L ACA+ G + EA F
Sbjct: 199 EGLVYFSQMWRSKVVCDSYTFAIALKACANLGALDHGRQIHCQALKRSLEASSFVANTLA 258
Query: 268 --FDCLGK--------NGMTPKS-EHYACMVDVMARAGQ---VAEAYQFLCQIPIQPTAS 313
++ GK MT ++ + ++ ++GQ A+ + +I + P
Sbjct: 259 TMYNKCGKLDYGSRLFEKMTIRNVVSWTMIITTYTQSGQEENALRAFIRMQEIGVSPNDF 318
Query: 314 MLGALLNGCMNHGKLDLAE 332
A+++GC N GK + E
Sbjct: 319 TFAAVISGCANLGKTEWGE 337
>29820.m001036 pentatricopeptide repeat-containing protein, putative
Length = 461
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 168/324 (51%), Gaps = 33/324 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + G P++ TFPF+ KA A LL +LG+ +H + K G++ + FV+ SL+ +Y
Sbjct: 105 MRKKGFLPNNFTFPFVIKACARLLDFQLGIMMHTLVVKLGFDCNLFVNTSLVSLY----- 159
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AKCG I A ++ DL+PE +++SW+ +I GY+
Sbjct: 160 --------------------------AKCGSIDDALKMLDLIPESNIVSWTAIISGYIGV 193
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G Y EA+ +F M +G +P+ T+V VL AC +G L G + Y+ +N + + +
Sbjct: 194 GKYREAIDLFRRMLETGLRPDSFTIVQVLSACIQIGDLANGEWIDRYITENVMARNVFVT 253
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
TSLVD+YAK G +++A +F M D+ W++MI G+A +GL K++LDLF +M G
Sbjct: 254 TSLVDLYAKHGNMEKARCLFDG--MAERDIVSWSAMIQGYASNGLPKDALDLFFKMLNAG 311
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
+KPD + L ACA G ++ + + + + ++D+ A+ G +A+A+
Sbjct: 312 LKPDHYAMVGFLCACARLGALELGDWGSNLMDRTEFFTNHVLGTALIDMYAKCGSMAKAW 371
Query: 301 QFLCQIPIQPTASMLGALLNGCMN 324
+ I + A A+ MN
Sbjct: 372 EVFKGIKGKDRAVWNAAISGLAMN 395
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 133/241 (55%), Gaps = 6/241 (2%)
Query: 38 KAGYESDRFVSNSLIHMYSSFRDIPNA----RKVFDGIPVKNLVSWNSMLDGYAKCGDIS 93
+ G D F ++ D+ N R + + + +N+ S++D YAK G++
Sbjct: 208 ETGLRPDSFTIVQVLSACIQIGDLANGEWIDRYITENVMARNVFVTTSLVDLYAKHGNME 267
Query: 94 MARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACA 153
AR +FD M E+D++SWS +I GY G +AL +F +M +G KP+ MV LCACA
Sbjct: 268 KARCLFDGMAERDIVSWSAMIQGYASNGLPKDALDLFFKMLNAGLKPDHYAMVGFLCACA 327
Query: 154 HLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIW 213
LGAL+ G + + E VL T+L+DMYAKCG++ +A VF+ +K D +W
Sbjct: 328 RLGALELGDWGSNLMDRTEFFTNHVLGTALIDMYAKCGSMAKAWEVFKG--IKGKDRAVW 385
Query: 214 NSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK 273
N+ I G A +G K + LF +M G++PD T++ LL C H GLV E +F +G+
Sbjct: 386 NAAISGLAMNGHEKAAFGLFGQMERFGIQPDGNTFVGLLCGCTHAGLVDEGRKYFHSMGR 445
Query: 274 N 274
+
Sbjct: 446 S 446
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 111/221 (50%), Gaps = 2/221 (0%)
Query: 79 WNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP 138
W+ ++ D + R +F+ + E DV+ ++ +I G V + E++ + MR G
Sbjct: 51 WSMIIRSSFDFNDTTYTRLIFNQIKEPDVVLYNTMIRGLVSSDCFTESIEFYYSMRKKGF 110
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
PN T V+ ACA L G MMH V+ L + TSLV +YAKCG+I +AL
Sbjct: 111 LPNNFTFPFVIKACARLLDFQLGIMMHTLVVKLGFDCNLFVNTSLVSLYAKCGSIDDALK 170
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHG 258
+ L+ S++ W ++I G+ G +E++DLF M G++PD T + +LSAC
Sbjct: 171 ML--DLIPESNIVSWTAIISGYIGVGKYREAIDLFRRMLETGLRPDSFTIVQVLSACIQI 228
Query: 259 GLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
G + + + +N M +VD+ A+ G + +A
Sbjct: 229 GDLANGEWIDRYITENVMARNVFVTTSLVDLYAKHGNMEKA 269
>29844.m003191 pentatricopeptide repeat-containing protein, putative
Length = 456
Score = 174 bits (441), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 115/340 (33%), Positives = 166/340 (48%), Gaps = 74/340 (21%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R+G+ PD+ T+ L K+ L R+ I+ +I K G + D V+NSLI +S+
Sbjct: 87 MRRIGILPDNQTYNLLLKSYPQLENRK-PFDIYAHIVKYGLDFDNSVTNSLITAFSNCGC 145
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYA---------KC---------------------- 89
+ A +V D P +NLV+W +M+DGY KC
Sbjct: 146 VQFAHQVLDESPHRNLVTWTAMIDGYVRNGFPVDGIKCFKKMRSMGVKIDEITVVSVLCA 205
Query: 90 ----GDISMARQVFDLMPEQDVLSW-----SCLID------------------------- 115
GD+ R V E + W S L+D
Sbjct: 206 AGMAGDVWFGRWVHGFYVESGRVKWDVYIGSSLLDMYCKCGYCDDACKLFNEMPVKNIVC 265
Query: 116 ------GYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI 169
GYV+ + +AL +F++M ++ +PN+ T+ SVL A A LGALD+GR +H Y+
Sbjct: 266 WSALIAGYVQCNRFKDALLLFQDMLLTDVRPNQCTLSSVLTASAQLGALDRGRWVHDYID 325
Query: 170 DNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKES 229
N L + +L T+L+DMYAKCG I EA VF +K +V+ W +MI G A HG S
Sbjct: 326 RNSLEMNSILGTALIDMYAKCGCISEAYVVFNKLHIK--NVYTWTAMINGLAMHGDALSS 383
Query: 230 LDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD 269
L+LFS M GV+P+ +T++ +L+ACAHGGLV FD
Sbjct: 384 LNLFSHMISNGVQPNGVTFVGILNACAHGGLVHIGRGLFD 423
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 79/180 (43%), Gaps = 36/180 (20%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML V P+ T + ASA L + G +H YI + E + + +LI MY
Sbjct: 289 MLLTDVRPNQCTLSSVLTASAQLGALDRGRWVHDYIDRNSLEMNSILGTALIDMY----- 343
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AKCG IS A VF+ + ++V +W+ +I+G
Sbjct: 344 --------------------------AKCGCISEAYVVFNKLHIKNVYTWTAMINGLAMH 377
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR-----MMHHYVIDNELPL 175
GD +L +F M +G +PN VT V +L ACAH G + GR M H Y ++ L L
Sbjct: 378 GDALSSLNLFSHMISNGVQPNGVTFVGILNACAHGGLVHIGRGLFDMMKHMYNLEPNLKL 437
>28629.m000556 pentatricopeptide repeat-containing protein, putative
Length = 342
Score = 174 bits (441), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 156/295 (52%), Gaps = 22/295 (7%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
MLR G P+ TFPF K+ A L G +H ++ K G + FV +LI MY
Sbjct: 42 MLRSGSSPNAFTFPFALKSCAALSLPFTGEQLHSHVFKTGCLLEPFVQTALISMYGRCAL 101
Query: 61 IPNARKVFD---------------GIPVK-----NLVSWNSMLDGYAKCGDISMARQVFD 100
I NARKVFD G VK ++ N +L Y KCG++ AR++F+
Sbjct: 102 IDNARKVFDENRQSRILEVGMSIHGFCVKFGLVMDMSVGNCLLTMYVKCGEVGSARKLFN 161
Query: 101 LMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK 160
+P + +++W+ +I+GY + G + L ++ EM +SG P+ VT+ VL +CAHLGA
Sbjct: 162 DIPGKGLITWNAMINGYSQNGLATDVLELYREMELSGVSPDAVTLAGVLSSCAHLGAQSV 221
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
GR + + L +L+++YA+CG + A +F M V W +++GG+
Sbjct: 222 GREIEERMNVCGFASNPFLNNALINLYARCGNLVRARDIFDG--MPVKSVVSWTAILGGY 279
Query: 221 ACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNG 275
HG + ++ LF++M GV+PD ++++LSAC+H GL+ + +F + G
Sbjct: 280 GMHGEGETAVKLFNDMIRTGVRPDGTAFVSVLSACSHAGLIDKGLEYFSMMQNQG 334
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 119/305 (39%), Gaps = 50/305 (16%)
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
+S +++ + +L W+ + K + AL+++ +M SG PN T L +
Sbjct: 1 MSSKTKLYHKIQSSTLLKWNTQLRESANKSHFTNALSIYLQMLRSGSSPNAFTFPFALKS 60
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF----------- 200
CA L G +H +V L ++T+L+ MY +C I A VF
Sbjct: 61 CAALSLPFTGEQLHSHVFKTGCLLEPFVQTALISMYGRCALIDNARKVFDENRQSRILEV 120
Query: 201 ---------RSGLMKPSDV-----------------------------FIWNSMIGGFAC 222
+ GL+ V WN+MI G++
Sbjct: 121 GMSIHGFCVKFGLVMDMSVGNCLLTMYVKCGEVGSARKLFNDIPGKGLITWNAMINGYSQ 180
Query: 223 HGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEH 282
+GL + L+L+ EM + GV PD +T +LS+CAH G + + G
Sbjct: 181 NGLATDVLELYREMELSGVSPDAVTLAGVLSSCAHLGAQSVGREIEERMNVCGFASNPFL 240
Query: 283 YACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELE 342
++++ AR G + A +P++ S A+L G HG+ + A + +I
Sbjct: 241 NNALINLYARCGNLVRARDIFDGMPVKSVVSWT-AILGGYGMHGEGETAVKLFNDMIRTG 299
Query: 343 PHQDG 347
DG
Sbjct: 300 VRPDG 304
>29844.m003243 pentatricopeptide repeat-containing protein, putative
Length = 606
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 148/251 (58%), Gaps = 7/251 (2%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGL--AIHGYITKAGYESDRFVSNSLIHMYSSF 58
ML V P+ +T ++ SAC K +L L +IH Y+ + + N+++ MY
Sbjct: 350 MLLSDVEPNEVTM--ISVLSACSQKGDLSLGKSIHEYVRRKNLNLSVNLMNAILDMYVKC 407
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
+ AR++FD + K++ SW SM++GYAK G++ +AR+ FD MP+++V+SW+ +I GY
Sbjct: 408 GCLVAAREIFDSMGTKDVFSWTSMVNGYAKTGELEIARKFFDDMPKRNVVSWNAMIAGYS 467
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT-L 177
+ +A+ +F M G P E T+V VL AC LG LD GR++H Y I+ + T +
Sbjct: 468 QNNQPKKAIVLFHHMVGEGLIPIENTLVCVLSACGQLGYLDLGRLIHMYHIERKQKGTSV 527
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
++ +L+DMYAKCG I A VF M D+ WNSMI A HG K++L +F +M
Sbjct: 528 IIANALIDMYAKCGVIDAAARVFNG--MPGRDLVSWNSMIAACASHGHAKQALLMFGQMI 585
Query: 238 IVGVKPDEITY 248
G KPD+IT+
Sbjct: 586 HEGFKPDDITF 596
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 140/294 (47%), Gaps = 37/294 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+R V D +F F KAS L G +IH I K G+ V N LIH YS
Sbjct: 249 MVRERVEMDTRSFVFALKASEQFLTALEGESIHCAIWKIGFPCALLVQNGLIHFYSVH-- 306
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
G + +AR+VFD P +DV+SW+ +IDGY
Sbjct: 307 -----------------------------GCLVLARKVFDETPARDVVSWTSMIDGYSTH 337
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
Y +AL +F+ M +S +PNEVTM+SVL AC+ G L G+ +H YV L L++ L
Sbjct: 338 DYYTDALKLFDSMLLSDVEPNEVTMISVLSACSQKGDLSLGKSIHEYVRRKNLNLSVNLM 397
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+++DMY KCG + A +F S M DVF W SM+ G+A G ++ + F +M
Sbjct: 398 NAILDMYVKCGCLVAAREIFDS--MGTKDVFSWTSMVNGYAKTGELEIARKFFDDMP--- 452
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAG 294
K + +++ +++ + K+A F + G+ P C++ + G
Sbjct: 453 -KRNVVSWNAMIAGYSQNNQPKKAIVLFHHMVGEGLIPIENTLVCVLSACGQLG 505
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 121/275 (44%), Gaps = 11/275 (4%)
Query: 72 PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFE 131
PV ++++ ++ D GDI A +F+ + + W+ +I G+ L+ F
Sbjct: 192 PVSRVLAFCALAD----TGDIRHAHLLFNQIEYPNTYIWNTMIRGFSNAKMPVMGLSFFW 247
Query: 132 EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG 191
+M + + + V L A +G +H + P L+++ L+ Y+ G
Sbjct: 248 QMVRERVEMDTRSFVFALKASEQFLTALEGESIHCAIWKIGFPCALLVQNGLIHFYSVHG 307
Query: 192 AIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
+ A VF DV W SMI G++ H ++L LF M + V+P+E+T +++
Sbjct: 308 CLVLARKVFDE--TPARDVVSWTSMIDGYSTHDYYTDALKLFDSMLLSDVEPNEVTMISV 365
Query: 252 LSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPT 311
LSAC+ G + + + + + ++D+ + G + A + + +
Sbjct: 366 LSACSQKGDLSLGKSIHEYVRRKNLNLSVNLMNAILDMYVKCGCLVAAREIFDSMGTKDV 425
Query: 312 ASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQD 346
S +++NG G+L++A RK + P ++
Sbjct: 426 FSW-TSMVNGYAKTGELEIA----RKFFDDMPKRN 455
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 51 LIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSW 110
LIHMY R +++ N+++D YAKCG I A +VF+ MP +D++SW
Sbjct: 512 LIHMYHIERKQKGT----------SVIIANALIDMYAKCGVIDAAARVFNGMPGRDLVSW 561
Query: 111 SCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
+ +I G +AL +F +M G KP+++T S
Sbjct: 562 NSMIAACASHGHAKQALLMFGQMIHEGFKPDDITFES 598
>30147.m014400 pentatricopeptide repeat-containing protein, putative
Length = 274
Score = 171 bits (434), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 146/250 (58%), Gaps = 6/250 (2%)
Query: 15 FLAKASACLLKRELGLAI--HGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGI- 71
F+ AC L +L AI H I + GY + ++ SL+ Y A +V + +
Sbjct: 13 FIHLLEACKLSLDLKTAIETHARIIRFGYGTYPSLAASLVSTYVKCDHFNLACEVINQVF 72
Query: 72 -PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVF 130
NLV+ N ++D + G+ +A++VF MP +DV++W+ LI GYV+ ++EAL F
Sbjct: 73 SWTVNLVALNLVIDNIMRVGECEIAKKVFYKMPARDVVTWNSLIGGYVKNARFEEALRFF 132
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
M S +P++ T SV+ ACA LGALD + +H +I + L +L ++L+DM++KC
Sbjct: 133 RVMLGSDIEPDKFTFASVITACARLGALDNAQWVHDLMIQKRVELNCILSSALIDMFSKC 192
Query: 191 GAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLN 250
G I+ A F S ++ SDV +WNSMI G A HGL +++ +F +M + V PD IT++
Sbjct: 193 GRIRTAKETFES--VQRSDVSVWNSMINGLAVHGLALDAISVFLKMEVENVLPDSITFIG 250
Query: 251 LLSACAHGGL 260
+L+AC H GL
Sbjct: 251 ILTACGHSGL 260
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 174 PLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF 233
+ LV ++D + G + A VF M DV WNS+IGG+ + +E+L F
Sbjct: 75 TVNLVALNLVIDNIMRVGECEIAKKVFYK--MPARDVVTWNSLIGGYVKNARFEEALRFF 132
Query: 234 SEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARA 293
M ++PD+ T+ ++++ACA G + A + D + + + + ++D+ ++
Sbjct: 133 RVMLGSDIEPDKFTFASVITACARLGALDNAQWVHDLMIQKRVELNCILSSALIDMFSKC 192
Query: 294 GQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
G++ A + + + S+ +++NG HG
Sbjct: 193 GRIRTAKETFESVQ-RSDVSVWNSMINGLAVHG 224
>30174.m008876 pentatricopeptide repeat-containing protein, putative
Length = 450
Score = 171 bits (434), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 140/223 (62%), Gaps = 3/223 (1%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
E D NS+I + + +A+ +FD +P + ++SW +M+DGYAK G + +AR+ FD
Sbjct: 228 ERDLISWNSMIDGCAKRGRMEDAQALFDTMPERTIISWANMVDGYAKLGYVDIARKFFDN 287
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDK 160
MP++DV++ + ++ GYV+ G EAL +F +M R S P+ T++ VL A A LG ++K
Sbjct: 288 MPDRDVVACNAMMSGYVQNGYCMEALGIFHDMQRESNLCPDNATLLIVLSAIAQLGHIEK 347
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
G +H Y+ +N L L +L+DMY+KCG+ + A+ VF K +D WN+MI G
Sbjct: 348 GVEIHCYIQENGFSLEEKLGVALIDMYSKCGSAENAMLVFEGIKGKTADH--WNAMINGL 405
Query: 221 ACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKE 263
A HG+ + +L EM VG KPD+IT++ LL+AC H GL+KE
Sbjct: 406 AIHGMGELALHFLIEMERVGSKPDDITFIGLLNACGHAGLMKE 448
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 192/363 (52%), Gaps = 24/363 (6%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML+ GVF D + + KA + L + G+ IHG + K + SD F+ N LI +Y R
Sbjct: 91 MLQNGVFVDKFSVSLVLKACSRLGLVKEGMQIHGLLRKLKFGSDVFLQNCLIGLYVKCRC 150
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMP--EQDVLSWSCLIDGYV 118
I AR+VFD +P+++ VS+NSM+ GY K G+I +ARQ++D+MP ++++SW+ L+ GY+
Sbjct: 151 IDYARQVFDKMPMRDSVSYNSMIAGYVKHGNIDLARQLYDVMPINWRNLVSWNSLLSGYM 210
Query: 119 RKGD-YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELP-LT 176
R + ++ A +FE+M P+ + ++ S++ CA +GRM + + +P T
Sbjct: 211 RSDNGFELAWNLFEKM----PERDLISWNSMIDGCAK-----RGRMEDAQALFDTMPERT 261
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
++ ++VD YAK G + A F + M DV N+M+ G+ +G E+L +F +M
Sbjct: 262 IISWANMVDGYAKLGYVDIARKFFDN--MPDRDVVACNAMMSGYVQNGYCMEALGIFHDM 319
Query: 237 HI-VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQ 295
+ PD T L +LSA A G +++ + +NG + + + ++D+ ++ G
Sbjct: 320 QRESNLCPDNATLLIVLSAIAQLGHIEKGVEIHCYIQENGFSLEEKLGVALIDMYSKCGS 379
Query: 296 VAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELE----PHQDGRYVG 351
A I TA A++NG HG + E LIE+E D ++G
Sbjct: 380 AENAMLVFEGIK-GKTADHWNAMINGLAIHG---MGELALHFLIEMERVGSKPDDITFIG 435
Query: 352 LSN 354
L N
Sbjct: 436 LLN 438
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 109/255 (42%), Gaps = 41/255 (16%)
Query: 104 EQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRM 163
++D W+ +I + D +AL +F M +G ++ ++ VL AC+ LG + +G
Sbjct: 62 KEDPFLWNAVIKTHSHGNDPKQALIIFSLMLQNGVFVDKFSVSLVLKACSRLGLVKEGMQ 121
Query: 164 MHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
+H + + + L+ L+ +Y KC I A VF M+ D +NSMI G+ H
Sbjct: 122 IHGLLRKLKFGSDVFLQNCLIGLYVKCRCIDYARQVFDKMPMR--DSVSYNSMIAGYVKH 179
Query: 224 GLVKESLDLFSEMHIVGV------------------------------KPDEITYLNLLS 253
G + + L+ M I + D I++ +++
Sbjct: 180 GNIDLARQLYDVMPINWRNLVSWNSLLSGYMRSDNGFELAWNLFEKMPERDLISWNSMID 239
Query: 254 ACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP----IQ 309
CA G +++A FD + + + +A MVD A+ G V A +F +P +
Sbjct: 240 GCAKRGRMEDAQALFDTMPERTIIS----WANMVDGYAKLGYVDIARKFFDNMPDRDVVA 295
Query: 310 PTASMLGALLNG-CM 323
A M G + NG CM
Sbjct: 296 CNAMMSGYVQNGYCM 310
>30174.m008866 pentatricopeptide repeat-containing protein, putative
Length = 474
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 140/223 (62%), Gaps = 3/223 (1%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
E D NS+I + + +A+ +FD +P + ++SW +M+DGYAK G + +AR+ FD
Sbjct: 252 ERDLISWNSMIDGCAKRGRMEDAQALFDTMPERTIISWANMVDGYAKLGYVDIARKFFDN 311
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDK 160
MP++DV++ + ++ GYV+ G EAL +F +M R S P+ T++ VL A A LG ++K
Sbjct: 312 MPDRDVVACNAMMSGYVQNGYCMEALGIFHDMQRESNLCPDNATLLIVLSAIAQLGHIEK 371
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
G +H Y+ +N L L +L+DMY+KCG+ + A+ VF K +D WN+MI G
Sbjct: 372 GVEIHCYIQENGFSLEEKLGVALIDMYSKCGSAENAMLVFEGIKGKTADH--WNAMINGL 429
Query: 221 ACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKE 263
A HG+ + +L EM VG KPD+IT++ LL+AC H GL+KE
Sbjct: 430 AIHGMGELALHFLIEMERVGSKPDDITFIGLLNACGHAGLMKE 472
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 192/363 (52%), Gaps = 24/363 (6%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML+ GVF D + + KA + L + G+ IHG + K + SD F+ N LI +Y R
Sbjct: 115 MLQNGVFVDKFSVSLVLKACSRLGLVKEGMQIHGLLRKLKFGSDVFLQNCLIGLYVKCRC 174
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMP--EQDVLSWSCLIDGYV 118
I AR+VFD +P+++ VS+NSM+ GY K G+I +ARQ++D+MP ++++SW+ L+ GY+
Sbjct: 175 IDYARQVFDKMPMRDSVSYNSMIAGYVKHGNIDLARQLYDVMPINWRNLVSWNSLLSGYM 234
Query: 119 RKGD-YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELP-LT 176
R + ++ A +FE+M P+ + ++ S++ CA +GRM + + +P T
Sbjct: 235 RSDNGFELAWNLFEKM----PERDLISWNSMIDGCAK-----RGRMEDAQALFDTMPERT 285
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
++ ++VD YAK G + A F + M DV N+M+ G+ +G E+L +F +M
Sbjct: 286 IISWANMVDGYAKLGYVDIARKFFDN--MPDRDVVACNAMMSGYVQNGYCMEALGIFHDM 343
Query: 237 HI-VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQ 295
+ PD T L +LSA A G +++ + +NG + + + ++D+ ++ G
Sbjct: 344 QRESNLCPDNATLLIVLSAIAQLGHIEKGVEIHCYIQENGFSLEEKLGVALIDMYSKCGS 403
Query: 296 VAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELE----PHQDGRYVG 351
A I TA A++NG HG + E LIE+E D ++G
Sbjct: 404 AENAMLVFEGIK-GKTADHWNAMINGLAIHG---MGELALHFLIEMERVGSKPDDITFIG 459
Query: 352 LSN 354
L N
Sbjct: 460 LLN 462
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 109/255 (42%), Gaps = 41/255 (16%)
Query: 104 EQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRM 163
++D W+ +I + D +AL +F M +G ++ ++ VL AC+ LG + +G
Sbjct: 86 KEDPFLWNAVIKTHSHGNDPKQALIIFSLMLQNGVFVDKFSVSLVLKACSRLGLVKEGMQ 145
Query: 164 MHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
+H + + + L+ L+ +Y KC I A VF M+ D +NSMI G+ H
Sbjct: 146 IHGLLRKLKFGSDVFLQNCLIGLYVKCRCIDYARQVFDKMPMR--DSVSYNSMIAGYVKH 203
Query: 224 GLVKESLDLFSEMHIVGV------------------------------KPDEITYLNLLS 253
G + + L+ M I + D I++ +++
Sbjct: 204 GNIDLARQLYDVMPINWRNLVSWNSLLSGYMRSDNGFELAWNLFEKMPERDLISWNSMID 263
Query: 254 ACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP----IQ 309
CA G +++A FD + + + +A MVD A+ G V A +F +P +
Sbjct: 264 GCAKRGRMEDAQALFDTMPERTIIS----WANMVDGYAKLGYVDIARKFFDNMPDRDVVA 319
Query: 310 PTASMLGALLNG-CM 323
A M G + NG CM
Sbjct: 320 CNAMMSGYVQNGYCM 334
>27732.m000283 pentatricopeptide repeat-containing protein, putative
Length = 619
Score = 171 bits (433), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 151/286 (52%), Gaps = 40/286 (13%)
Query: 11 LTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSF------------ 58
LT + +A + + +HG + + G+E D F+ NS+I MY F
Sbjct: 219 LTLTIMFEACRHFGRYREAMQVHGLVLRIGFEFDIFLGNSIIAMYCEFGCMDEAKRMFQM 278
Query: 59 -------------------RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVF 99
+I A K+F+ IP K++VSW +M+ G++ G++ Q+F
Sbjct: 279 MNNKDVVSWNSLISGYIQHDEIEEAYKLFEKIPGKDVVSWTTMITGFSAKGNVQKGIQLF 338
Query: 100 DLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALD 159
+MPE+D ++W+ +I G+V G+Y+EA F EM KPN +T S+L A A L L+
Sbjct: 339 KIMPEKDDVAWTAVISGFVSNGEYEEAFLWFIEMLKKAVKPNSLTFSSMLTASASLATLN 398
Query: 160 KGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGG 219
+G +H +V ++ L +R SLV MY+KCG I EA VF S + ++ +NSMI G
Sbjct: 399 QGLQIHAHVEKMDVQFDLSIRNSLVSMYSKCGNIAEAYQVFTS--INAPNIISFNSMITG 456
Query: 220 FACHGLVKESLDLFSEMHIVGVKPDEITYLN-------LLSACAHG 258
F+ +G +E+LDLFS+M +P+EIT+L+ L CA G
Sbjct: 457 FSQNGHGEEALDLFSKMRKENQEPNEITFLDYLEKRFCLFGICAGG 502
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 139/281 (49%), Gaps = 30/281 (10%)
Query: 48 SNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDV 107
SN++I Y + A KVF+G K++VSW+SM+DGY K G I AR++F++MP ++V
Sbjct: 125 SNAMISGYLKVGRLEEAIKVFEGTVEKDVVSWSSMVDGYCKKGRIFEARELFNMMPVRNV 184
Query: 108 LSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHY 167
++W+ +IDGY+ G ++ ++F MR + N +T+ + AC H G + +H
Sbjct: 185 VTWTSMIDGYMNVGFFENGFSLFLSMR-RVIEVNPLTLTIMFEACRHFGRYREAMQVHGL 243
Query: 168 VIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
V+ + L S++ MY + G + EA +F+ +M DV WNS+I G+ H ++
Sbjct: 244 VLRIGFEFDIFLGNSIIAMYCEFGCMDEAKRMFQ--MMNNKDVVSWNSLISGYIQHDEIE 301
Query: 228 ESLDLFSE-------------------------MHIVGVKP--DEITYLNLLSACAHGGL 260
E+ LF + + + + P D++ + ++S G
Sbjct: 302 EAYKLFEKIPGKDVVSWTTMITGFSAKGNVQKGIQLFKIMPEKDDVAWTAVISGFVSNGE 361
Query: 261 VKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQ 301
+EA+ +F + K + P S ++ M+ A + + Q
Sbjct: 362 YEEAFLWFIEMLKKAVKPNSLTFSSMLTASASLATLNQGLQ 402
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 114/222 (51%), Gaps = 19/222 (8%)
Query: 51 LIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSW 110
+I+ + + +I + +F+ +P KN+++ SML YAK G I+ A+++FD MPE+ ++
Sbjct: 1 MINKHGNNGNIEESESIFNRMPHKNVITHTSMLTAYAKNGQIAKAKKLFDEMPERTTATY 60
Query: 111 SCLIDGYVRKG-DYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI 169
+ +I Y+R DEA ++F M + N V+ +++ G +K ++
Sbjct: 61 NAMITAYIRNSCMVDEAFSLFSRM----SERNAVSYGAMITGFLKAGMFEKAENLYR--- 113
Query: 170 DNELPLTL---VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLV 226
E+P V +++ Y K G ++EA+ VF + K DV W+SM+ G+ G +
Sbjct: 114 --EIPAKWREPVCSNAMISGYLKVGRLEEAIKVFEGTVEK--DVVSWSSMVDGYCKKGRI 169
Query: 227 KESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFF 268
E+ +LF+ M + V +T+ +++ + G + + F
Sbjct: 170 FEARELFNMMPVRNV----VTWTSMIDGYMNVGFFENGFSLF 207
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 145/332 (43%), Gaps = 52/332 (15%)
Query: 50 SLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCG-DISMARQVFDLMPEQDVL 108
S++ Y+ I A+K+FD +P + ++N+M+ Y + + A +F M E++ +
Sbjct: 31 SMLTAYAKNGQIAKAKKLFDEMPERTTATYNAMITAYIRNSCMVDEAFSLFSRMSERNAV 90
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHL-GALDKGRMMHHY 167
S+ +I G+++ G +++A ++ E+ +P +C+ A + G L GR+
Sbjct: 91 SYGAMITGFLKAGMFEKAENLYREIPAKWREP--------VCSNAMISGYLKVGRLEEAI 142
Query: 168 -VIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLV 226
V + + +V +S+VD Y K G I EA +F +M +V W SMI G+ G
Sbjct: 143 KVFEGTVEKDVVSWSSMVDGYCKKGRIFEARELF--NMMPVRNVVTWTSMIDGYMNVGFF 200
Query: 227 KESLDLFSEM-HIVGVKPDEITYLNLLSACAHGGLVKEAW----------YFFDCLGKNG 275
+ LF M ++ V P +T + AC H G +EA + FD N
Sbjct: 201 ENGFSLFLSMRRVIEVNP--LTLTIMFEACRHFGRYREAMQVHGLVLRIGFEFDIFLGNS 258
Query: 276 MTPKSEHYACM------------VDVMA---------RAGQVAEAYQFLCQIPIQPTASM 314
+ + CM DV++ + ++ EAY+ +IP + S
Sbjct: 259 IIAMYCEFGCMDEAKRMFQMMNNKDVVSWNSLISGYIQHDEIEEAYKLFEKIPGKDVVSW 318
Query: 315 LGALLNGCMNHGKLDLAETVGRKLIELEPHQD 346
++ G G + G +L ++ P +D
Sbjct: 319 T-TMITGFSAKGNVQ----KGIQLFKIMPEKD 345
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 69/149 (46%), Gaps = 31/149 (20%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML+ V P+ LTF + ASA L GL IH ++ K + D + NSL+ MYS +
Sbjct: 372 MLKKAVKPNSLTFSSMLTASASLATLNQGLQIHAHVEKMDVQFDLSIRNSLVSMYSKCGN 431
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I A +VF I N++S+NSM+ G+++
Sbjct: 432 IAEAYQVFTSINAPNIISFNSMITGFSQ-------------------------------N 460
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
G +EAL +F +MR +PNE+T + L
Sbjct: 461 GHGEEALDLFSKMRKENQEPNEITFLDYL 489
>29648.m001934 pentatricopeptide repeat-containing protein, putative
Length = 524
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 201/399 (50%), Gaps = 12/399 (3%)
Query: 30 LAIHGY--ITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFD-----GIPVKNLVSWNSM 82
LA+H + + +GY D F +++I S+ R++ +++F G +VS ++
Sbjct: 123 LALHQFCLMRSSGYSPDEFTCSAVITSCSNLRNLDKGKQIFAFCLKVGFLSNTIVS-SAA 181
Query: 83 LDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNE 142
+D ++KC + + Q+F+ + + + + +I Y G + AL +F +P E
Sbjct: 182 IDLFSKCNRLEDSVQLFEELDQLNSALCNSMISSYAGHGFGENALQLFVLALRENIRPTE 241
Query: 143 VTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRS 202
T+ SVL + + ++G H V+ L ++ +SLV MY K G I A+ +F+S
Sbjct: 242 FTISSVL-SFISIFPPEQGTQFHSSVVKLGFELDAIVASSLVQMYTKFGFIDYAMDIFKS 300
Query: 203 GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVK 262
M D+ WN+MI G +G V E+LD F ++ G PD IT +L AC++GG ++
Sbjct: 301 --MTVRDLISWNTMIMGLTQNGRVIEALDAFKKLLNRGPPPDRITLAGVLLACSYGGFIE 358
Query: 263 EAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNG 321
E F + G G+ P +EHYA +V+++ +AG + EA + +P +P + ++L+
Sbjct: 359 EGMTIFSSMQGSYGIIPSNEHYASIVNLLCQAGWLDEAMSMIEAMPSEPNSMTCRSILHA 418
Query: 322 CMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSP 381
C G L L E V +L+++ Y+ L+ +Y + +W+ +++ MER K
Sbjct: 419 CAIRGDLKLMEGVAERLVDIGSLSSLPYLVLARMYEMRGQWEAVVRVKKTMERTKAKTVD 478
Query: 382 GYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
G S++ + + F H + IY +L + +M+
Sbjct: 479 GCSWIGIKNNVRTFKEDQLQHHGCKDIYSLLRLMNWEME 517
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 100/184 (54%), Gaps = 2/184 (1%)
Query: 70 GIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAV 129
G N+V NS++D Y K G + A VF M E DV++W+ LI G + G + AL
Sbjct: 68 GFNTLNVVLGNSLIDMYGKFGCVDYAFGVFFTMEEVDVITWNSLIIGCCKSGYGELALHQ 127
Query: 130 FEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAK 189
F MR SG P+E T +V+ +C++L LDKG+ + + + ++ ++ +D+++K
Sbjct: 128 FCLMRSSGYSPDEFTCSAVITSCSNLRNLDKGKQIFAFCLKVGFLSNTIVSSAAIDLFSK 187
Query: 190 CGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYL 249
C +++++ +F + + + NSMI +A HG + +L LF ++P E T
Sbjct: 188 CNRLEDSVQLFEE--LDQLNSALCNSMISSYAGHGFGENALQLFVLALRENIRPTEFTIS 245
Query: 250 NLLS 253
++LS
Sbjct: 246 SVLS 249
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 118/230 (51%), Gaps = 15/230 (6%)
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVT---MVSVLCACAHLGAL 158
MPE+DV+SW+ +I G+ G +D AL +F EM+ G +P+ T MVS++ H
Sbjct: 1 MPERDVVSWNSMISGFASYGYFDSALGIFGEMQNMGVRPSAFTYSIMVSIVFDALH---- 56
Query: 159 DKGRMMHHYVIDNEL-PLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMI 217
G+ +H +I + L +VL SL+DMY K G + A VF + M+ DV WNS+I
Sbjct: 57 --GKELHGSMIRSGFNTLNVVLGNSLIDMYGKFGCVDYAFGVFFT--MEEVDVITWNSLI 112
Query: 218 GGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH-GGLVKEAWYFFDCLGKNGM 276
G G + +L F M G PDE T ++++C++ L K F CL K G
Sbjct: 113 IGCCKSGYGELALHQFCLMRSSGYSPDEFTCSAVITSCSNLRNLDKGKQIFAFCL-KVGF 171
Query: 277 TPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
+ + +D+ ++ ++ ++ Q ++ Q +++ ++++ HG
Sbjct: 172 LSNTIVSSAAIDLFSKCNRLEDSVQLFEELD-QLNSALCNSMISSYAGHG 220
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 45/216 (20%)
Query: 2 LRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDI 61
LR + P T + + + E G H + K G+E D V++SL+ MY+ F I
Sbjct: 233 LRENIRPTEFTISSVLSFIS-IFPPEQGTQFHSSVVKLGFELDAIVASSLVQMYTKFGFI 291
Query: 62 PNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKG 121
A +F + V++L+SWN+M I G + G
Sbjct: 292 DYAMDIFKSMTVRDLISWNTM-------------------------------IMGLTQNG 320
Query: 122 DYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-----RMMHHYVI--DNELP 174
EAL F+++ GP P+ +T+ VL AC++ G +++G M Y I NE
Sbjct: 321 RVIEALDAFKKLLNRGPPPDRITLAGVLLACSYGGFIEEGMTIFSSMQGSYGIIPSNE-- 378
Query: 175 LTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDV 210
S+V++ + G + EA+ + + +P+ +
Sbjct: 379 ----HYASIVNLLCQAGWLDEAMSMIEAMPSEPNSM 410
>30174.m008973 pentatricopeptide repeat-containing protein, putative
Length = 607
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 148/235 (62%), Gaps = 8/235 (3%)
Query: 44 DRFVSNSLIHMYSSFRDIPNARK-----VFDGIPVKNLVSWNSMLDGYAKCGDISMARQV 98
D + S+++ ++S +DI +A+ + G LV+ N+++D YAK G++ A V
Sbjct: 321 DDYTYPSVLNSFASMKDIQSAKSAHCLIIKTGFGAYTLVN-NALVDMYAKQGNLDYAFTV 379
Query: 99 FDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGAL 158
F+ MP++DV+SW+ L+ GY G Y++A+ +F +MR++G P+++ + SVL ACA L
Sbjct: 380 FNQMPDKDVVSWTSLVTGYSYNGSYEDAIKLFCDMRIAGVCPDQIVLASVLSACAELTVT 439
Query: 159 DKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIG 218
+ G+ +H ++ + L +L + SLV MYAKCG I++A +VF S M+ DV W ++I
Sbjct: 440 EFGQQVHATILKSGLCSSLSIDNSLVTMYAKCGGIEDANYVFDS--MQIRDVISWTALIV 497
Query: 219 GFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK 273
G+A +G K+SL + +M G KPD IT++ LL AC+H GLV++ +F+ + K
Sbjct: 498 GYAQNGRGKDSLHFYDQMIATGTKPDFITFIGLLFACSHTGLVEDGRRYFESMDK 552
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 158/306 (51%), Gaps = 12/306 (3%)
Query: 27 ELGLAIHGYIT--KAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLD 84
E+ L H YI + G+ SN ++ S I AR +FD +P ++ SWN+M+
Sbjct: 2 EIKLTRHSYIIARQTGFSYSAIKSNQQLNDLSKSGRIDEARHIFDKLPERDEFSWNTMIA 61
Query: 85 GYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD-EALAVFEEMRVSGPKPNEV 143
YA G ++ A+Q+F P + ++WS LI G+ K ++D EA ++ +M+ G +PN
Sbjct: 62 AYANSGRLTDAKQLFCEAPLKSSITWSSLISGFC-KYEFDIEAFELYLQMQFEGQRPNHY 120
Query: 144 TMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSG 203
T+ S+L C+ G L KG +H Y I L + + TSLVD+YAKC I EA ++F
Sbjct: 121 TLGSILRLCSRTGFLQKGERIHGYAIKTRLDANVFVVTSLVDLYAKCECISEAEYIFEM- 179
Query: 204 LMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKE 263
+ + W +M+ G++ +G ++ F +M GV+ ++ T+ ++L+AC G V +
Sbjct: 180 VADSKNHATWTAMLTGYSHNGDGFRAIKCFRDMRAEGVESNQFTFPSILTAC---GAVSD 236
Query: 264 AWY---FFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLN 320
+ C+ ++G + +VD+ A+ + A + L + + S +++
Sbjct: 237 HVFGVQVHGCIVRSGFGANIFVQSALVDMYAKCRDLNSANRVLENMEVNDVVS-WNSMIV 295
Query: 321 GCMNHG 326
GC+ G
Sbjct: 296 GCVREG 301
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 152/323 (47%), Gaps = 34/323 (10%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
GV + TFP + A + G+ +HG I ++G+ ++ FV ++L+ MY
Sbjct: 216 GVESNQFTFPSILTACGAVSDHVFGVQVHGCIVRSGFGANIFVQSALVDMY--------- 266
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
AKC D++ A +V + M DV+SW+ +I G VR+G
Sbjct: 267 ----------------------AKCRDLNSANRVLENMEVNDVVSWNSMIVGCVREGFEA 304
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
EAL++F EM K ++ T SVL + A + + + H +I ++ +LV
Sbjct: 305 EALSLFNEMHARDIKIDDYTYPSVLNSFASMKDIQSAKSAHCLIIKTGFGAYTLVNNALV 364
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
DMYAK G + A VF M DV W S++ G++ +G ++++ LF +M I GV PD
Sbjct: 365 DMYAKQGNLDYAFTVFNQ--MPDKDVVSWTSLVTGYSYNGSYEDAIKLFCDMRIAGVCPD 422
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLC 304
+I ++LSACA + + + K+G+ +V + A+ G + +A
Sbjct: 423 QIVLASVLSACAELTVTEFGQQVHATILKSGLCSSLSIDNSLVTMYAKCGGIEDANYVFD 482
Query: 305 QIPIQPTASMLGALLNGCMNHGK 327
+ I+ S AL+ G +G+
Sbjct: 483 SMQIRDVISWT-ALIVGYAQNGR 504
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 31/162 (19%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M GV PD + + A A L E G +H I K+G S + NSL+ MY+
Sbjct: 414 MRIAGVCPDQIVLASVLSACAELTVTEFGQQVHATILKSGLCSSLSIDNSLVTMYAKCGG 473
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I +A VFD + +++++SW +++ GYA+
Sbjct: 474 IEDANYVFDSMQIRDVISWTALIVGYAQ-------------------------------N 502
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR 162
G ++L +++M +G KP+ +T + +L AC+H G ++ GR
Sbjct: 503 GRGKDSLHFYDQMIATGTKPDFITFIGLLFACSHTGLVEDGR 544
>27446.m000498 pentatricopeptide repeat-containing protein, putative
Length = 801
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 146/264 (55%), Gaps = 3/264 (1%)
Query: 3 RVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIP 62
R G+ P H F A A + E+G IH K +S+ FV N LI MY+ +
Sbjct: 405 RTGMIPTHSCFTSALFACANIGDVEIGKQIHSLSIKMRCQSNPFVGNGLISMYAKCNSVE 464
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
+ VF+ + V++ VSWNS++ G + ++ A+ FD MP +D +SW+ +I +V
Sbjct: 465 DVSHVFNSMNVRDTVSWNSLVSGLSWNYLLNDAQNTFDNMPTRDAVSWAAIISAHVHADQ 524
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTS 182
+ A +F +M +G KPN++T+ S+L AC +LG G H V+ + L + +
Sbjct: 525 GEIAWQLFLDMLSAGLKPNDLTITSLLSACGNLGVTKLGEQFHALVLKHGFNSCLHVCNA 584
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
L+ MY KCG + + L+VF M D+ WN+++ G A +GL KE+ +F +M V
Sbjct: 585 LISMYFKCGNV-DGLYVFEE--MIDRDIVTWNTVLAGCAQNGLCKEATKVFEQMAEAEVF 641
Query: 243 PDEITYLNLLSACAHGGLVKEAWY 266
PDEI++L +LSAC+H G + AW+
Sbjct: 642 PDEISFLGVLSACSHAGGIVRAWF 665
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 157/349 (44%), Gaps = 40/349 (11%)
Query: 50 SLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLS 109
++I Y I A+ +FD I N+V+WN+ML GYA+ G + A+ +F MP ++ +S
Sbjct: 320 TIIAAYMHNGRIDEAKHIFDEIVNPNVVAWNAMLGGYAQNGMLEEAKAIFLQMPVRNAVS 379
Query: 110 WSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI 169
W+ +I G+V+ G+ E L +F E+ +G P S L ACA++G ++ G+ +H I
Sbjct: 380 WAAMIGGFVQNGNGKEGLKLFTELHRTGMIPTHSCFTSALFACANIGDVEIGKQIHSLSI 439
Query: 170 DNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKES 229
+ L+ MYAKC ++++ HVF S M D WNS++ G + + L+ ++
Sbjct: 440 KMRCQSNPFVGNGLISMYAKCNSVEDVSHVFNS--MNVRDTVSWNSLVSGLSWNYLLNDA 497
Query: 230 LDLFSEM--------------HI-----------------VGVKPDEITYLNLLSACAHG 258
+ F M H+ G+KP+++T +LLSAC +
Sbjct: 498 QNTFDNMPTRDAVSWAAIISAHVHADQGEIAWQLFLDMLSAGLKPNDLTITSLLSACGNL 557
Query: 259 GLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGAL 318
G+ K F + K+G ++ + + G V Y F + I +
Sbjct: 558 GVTKLGEQFHALVLKHGFNSCLHVCNALISMYFKCGNVDGLYVF--EEMIDRDIVTWNTV 615
Query: 319 LNGCMNHGKLDLAETVGRKLIELEPHQD-----GRYVGLSNVYAIFRRW 362
L GC +G A V ++ E E D G S+ I R W
Sbjct: 616 LAGCAQNGLCKEATKVFEQMAEAEVFPDEISFLGVLSACSHAGGIVRAW 664
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 136/279 (48%), Gaps = 11/279 (3%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
N+++ + D+ NARK F +P +N+ SWNS++ GY K G + AR++FD M E+ +
Sbjct: 125 NAMLAGFVQNGDLRNARKCFYEMPERNVSSWNSIITGYCKSGLMKEARELFDRMEERSSV 184
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
SW + GYV Y E VF M SG +P++ V L A L V
Sbjct: 185 SWMVMASGYVEISQYREGWCVFLMMMNSGVRPDQAVFVVGLSAIMGFNDLGMIGSFRTLV 244
Query: 169 IDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKE 228
+ +V+ T++++ YA+CG++ +A F S M + + SMI F+ G + +
Sbjct: 245 MKMGYEEDVVVATAILNAYARCGSLDDAFKFFES--MPARNEYSLTSMIAAFSQRGRLDD 302
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVD 288
++ L+ + K + T +++A H G + EA + FD + + P + M+
Sbjct: 303 AIALYEK----DSKQGDATRTTIIAAYMHNGRIDEAKHIFDEI----VNPNVVAWNAMLG 354
Query: 289 VMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
A+ G + EA Q+P++ S A++ G + +G
Sbjct: 355 GYAQNGMLEEAKAIFLQMPVRNAVS-WAAMIGGFVQNGN 392
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 141/302 (46%), Gaps = 17/302 (5%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
+ D NS+I +Y IP+A+ +FD KN+ +W +L GYAK G I A F
Sbjct: 56 QRDAVSWNSMISVYLQNNKIPDAKSLFDAFEYKNVRTWTILLSGYAKAGLIEEAETFFRS 115
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
MPE++V+SW+ ++ G+V+ GD A F EM P+ N + S++ G + +
Sbjct: 116 MPERNVVSWNAMLAGFVQNGDLRNARKCFYEM----PERNVSSWNSIITGYCKSGLMKEA 171
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWN-SMIGGF 220
R + + + +V+ + V++ L + SG+ VF+ S I GF
Sbjct: 172 RELFDRMEERSSVSWMVMASGYVEISQYREGWCVFLMMMNSGVRPDQAVFVVGLSAIMGF 231
Query: 221 ACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKS 280
G++ L +M G + D + +L+A A G + +A+ FF+ + P
Sbjct: 232 NDLGMIGSFRTLVMKM---GYEEDVVVATAILNAYARCGSLDDAFKFFESM------PAR 282
Query: 281 EHYA--CMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKL 338
Y+ M+ ++ G++ +A + Q A+ ++ M++G++D A+ + ++
Sbjct: 283 NEYSLTSMIAAFSQRGRLDDAIALYEKDSKQGDATRT-TIIAAYMHNGRIDEAKHIFDEI 341
Query: 339 IE 340
+
Sbjct: 342 VN 343
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 126/287 (43%), Gaps = 13/287 (4%)
Query: 46 FVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ 105
F N I + +AR +FD +P ++ VSWNSM+ Y + I A+ +FD +
Sbjct: 29 FQCNKKIQELGKLGRVKDARHLFDTMPQRDAVSWNSMISVYLQNNKIPDAKSLFDAFEYK 88
Query: 106 DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMH 165
+V +W+ L+ GY + G +EA F M P+ N V+ ++L G L R
Sbjct: 89 NVRTWTILLSGYAKAGLIEEAETFFRSM----PERNVVSWNAMLAGFVQNGDLRNARKCF 144
Query: 166 HYVIDNELPLTLVLR-TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
+ E+P V S++ Y K G ++EA +F M+ W M G+
Sbjct: 145 Y-----EMPERNVSSWNSIITGYCKSGLMKEARELFDR--MEERSSVSWMVMASGYVEIS 197
Query: 225 LVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYA 284
+E +F M GV+PD+ ++ LSA + F + K G
Sbjct: 198 QYREGWCVFLMMMNSGVRPDQAVFVVGLSAIMGFNDLGMIGSFRTLVMKMGYEEDVVVAT 257
Query: 285 CMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
+++ AR G + +A++F +P + S L +++ G+LD A
Sbjct: 258 AILNAYARCGSLDDAFKFFESMPARNEYS-LTSMIAAFSQRGRLDDA 303
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 129/311 (41%), Gaps = 26/311 (8%)
Query: 72 PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFE 131
P +L N + K G + AR +FD MP++D +SW+ +I Y++ +A ++F+
Sbjct: 24 PQAHLFQCNKKIQELGKLGRVKDARHLFDTMPQRDAVSWNSMISVYLQNNKIPDAKSLFD 83
Query: 132 EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG 191
N T +L A G +++ + + +V +++ + + G
Sbjct: 84 AFEYK----NVRTWTILLSGYAKAGLIEEAETFFRSMPER----NVVSWNAMLAGFVQNG 135
Query: 192 AIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
++ A F M +V WNS+I G+ GL+KE+ +LF M + ++++ +
Sbjct: 136 DLRNARKCFYE--MPERNVSSWNSIITGYCKSGLMKEARELFDRME----ERSSVSWMVM 189
Query: 252 LSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVM---ARAGQVAEAYQFLCQIPI 308
S +E W F + +G+ P + + + G + + ++
Sbjct: 190 ASGYVEISQYREGWCVFLMMMNSGVRPDQAVFVVGLSAIMGFNDLGMIGSFRTLVMKMGY 249
Query: 309 QPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFR---RWDKA 365
+ + A+LN G LD A K E P ++ L+++ A F R D A
Sbjct: 250 EEDVVVATAILNAYARCGSLDDA----FKFFESMPARN--EYSLTSMIAAFSQRGRLDDA 303
Query: 366 RSMREAMERMG 376
++ E + G
Sbjct: 304 IALYEKDSKQG 314
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 32/158 (20%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML G+ P+ LT L A L +LG H + K G+ S V N+LI MY +
Sbjct: 535 MLSAGLKPNDLTITSLLSACGNLGVTKLGEQFHALVLKHGFNSCLHVCNALISMYFKCGN 594
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ + VF+ + +++V+WN++L G A+ G A +VF+ M E +V
Sbjct: 595 V-DGLYVFEEMIDRDIVTWNTVLAGCAQNGLCKEATKVFEQMAEAEVF------------ 641
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGAL 158
P+E++ + VL AC+H G +
Sbjct: 642 -------------------PDEISFLGVLSACSHAGGI 660
>29761.m000430 pentatricopeptide repeat-containing protein, putative
Length = 400
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 179/352 (50%), Gaps = 44/352 (12%)
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD-EALAVFEEM-RVSGPKPNEVTMVS 147
+ + AR +F+ + ++ ++ L+ Y D+ A ++ +M R + PKPN
Sbjct: 56 SNFNYARYIFNHLHSPNIYLFTALVTAYASNPDHHLSAFELYRDMVRRAHPKPNHFIFPH 115
Query: 148 VLCACAHLGALDK---------------------GRMMH-----HYVIDNELPLTLVLRT 181
VL +C + + R M V D +V T
Sbjct: 116 VLKSCQNTKVVHSQIAKLGFSQYPVVQTALVDSYSRFMSDIGCARQVFDEMSERNVVSWT 175
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG- 240
+++ Y + G + A+ +F M DV WNS+I G +GL E++ LF +M +V
Sbjct: 176 AMITGYTRVGEVGNAISIFDK--MPERDVPSWNSIIAGCTQNGLFIEAICLFRKMILVAQ 233
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
KP+++T + LSAC H G+++ LGK EHY C+VD++ RAG+ EA
Sbjct: 234 SKPNQVTTVCALSACGHTGMLQ--------LGK-----WIEHYGCLVDILGRAGRFEEAL 280
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFR 360
+ + ++ I+P + G+LLNGC HG DLAE+ +KLIE++P G + L+N+Y
Sbjct: 281 EVVREMKIEPDEVVWGSLLNGCKVHGNTDLAESAIKKLIEIDPKNGGYGIMLANLYGGLG 340
Query: 361 RWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML 412
+WD+ R +R+ ++ K+PG S++E+ + +F + DK+HP SE+IY +L
Sbjct: 341 KWDEVRKVRKMLKDHNAYKTPGCSWIEVDNEVCQFYSVDKTHPRSEEIYRIL 392
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 118/219 (53%), Gaps = 22/219 (10%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSF-RDIPNARK 66
P+H FP + K+ C + +H I K G+ V +L+ YS F DI AR+
Sbjct: 108 PNHFIFPHVLKS--CQNTK----VVHSQIAKLGFSQYPVVQTALVDSYSRFMSDIGCARQ 161
Query: 67 VFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEA 126
VFD + +N+VSW +M+ GY + G++ A +FD MPE+DV SW+ +I G + G + EA
Sbjct: 162 VFDEMSERNVVSWTAMITGYTRVGEVGNAISIFDKMPERDVPSWNSIIAGCTQNGLFIEA 221
Query: 127 LAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
+ +F +M V+ KPN+VT V L AC H G L G+ + HY LVD
Sbjct: 222 ICLFRKMILVAQSKPNQVTTVCALSACGHTGMLQLGKWIEHY-------------GCLVD 268
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
+ + G +EAL V R ++P +V +W S++ G HG
Sbjct: 269 ILGRAGRFEEALEVVREMKIEPDEV-VWGSLLNGCKVHG 306
>29854.m001091 pentatricopeptide repeat-containing protein, putative
Length = 655
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/273 (38%), Positives = 153/273 (56%), Gaps = 17/273 (6%)
Query: 1 MLRVGVF---PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSS 57
M +VG F PD ++ + A A + G +HG+ + G D FV+NSL+ MY+
Sbjct: 234 MWKVGEFDIVPDAVSLVNVLPACASMGDWLCGKQVHGFAIRYGLFEDVFVANSLVDMYAK 293
Query: 58 FRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCL 113
+ A KVFD + K++VSWN+M+ GY++ G A +F+ M E+ DV+SWS +
Sbjct: 294 CGLMCIANKVFDRMQHKDVVSWNAMVTGYSQIGKFEDALGLFEKMREEKIQLDVVSWSAV 353
Query: 114 IDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL 173
I GY ++G EAL VF +M+V G +PNEVT+VS+L CA +GAL G+ H Y I L
Sbjct: 354 IAGYAQRGLGYEALNVFRQMQVCGLRPNEVTLVSLLSGCASVGALLHGKETHCYSIKCVL 413
Query: 174 PL-------TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLV 226
L++ +++DMY KC I +F S K +V W +MIGG+A HG
Sbjct: 414 NFDRSDPRDELLVVNAIIDMYTKCKDINVGRAIFNSIPPKDRNVVTWTAMIGGYAQHGEA 473
Query: 227 KESLDLFSEM---HIVGVKPDEITYLNLLSACA 256
++L+LFS+M + VKP+ T L ACA
Sbjct: 474 NDALELFSQMLKQYNRSVKPNAFTISCALMACA 506
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 125/219 (57%), Gaps = 9/219 (4%)
Query: 72 PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQD--VLSWSCLIDGYVRKGDYDEALAV 129
P L+ N+++D Y KC DI++ R +F+ +P +D V++W+ +I GY + G+ ++AL +
Sbjct: 420 PRDELLVVNAIIDMYTKCKDINVGRAIFNSIPPKDRNVVTWTAMIGGYAQHGEANDALEL 479
Query: 130 FEEMRVS---GPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL-TLVLRTSLVD 185
F +M KPN T+ L ACA L AL GR +H +V+ ++ L + L+D
Sbjct: 480 FSQMLKQYNRSVKPNAFTISCALMACARLAALRFGRQIHAFVLRDQYDCDVLYVANCLID 539
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MY+K G + A VF + MK + W S++ G+ HG +E++ +F EM G+ D
Sbjct: 540 MYSKSGDMDAARLVFDN--MKHRNTVSWTSLMTGYGMHGHGEEAIKVFDEMRREGLVSDG 597
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYA 284
IT+L +L AC+H G+V E +F + K + K+E+ A
Sbjct: 598 ITFLVVLYACSHSGMVDEGIKYFHDMCKE-FSEKNENSA 635
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 139/297 (46%), Gaps = 68/297 (22%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R+ PDH TFPF+ KA L G IH + G++S+ FV N+++ MY
Sbjct: 130 MRRLNWSPDHYTFPFVFKACGELPSFLHGSCIHAIVCSTGFDSNVFVCNAVVAMYGRCGA 189
Query: 61 IPNARKVFDGI---PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGY 117
AR++FD + V +LVSWNSM+ Y + GD+ ++F M W
Sbjct: 190 SSYARQMFDELLMGEVFDLVSWNSMIAVYLQSGDLKSGIELFRRM-------W------- 235
Query: 118 VRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
+ G++D P+ V++V+VL ACA +G G+ +H + I L +
Sbjct: 236 -KVGEFDIV-------------PDAVSLVNVLPACASMGDWLCGKQVHGFAIRYGLFEDV 281
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSM--------------------- 216
+ SLVDMYAKCG + A VF M+ DV WN+M
Sbjct: 282 FVANSLVDMYAKCGLMCIANKVFDR--MQHKDVVSWNAMVTGYSQIGKFEDALGLFEKMR 339
Query: 217 --------------IGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
I G+A GL E+L++F +M + G++P+E+T ++LLS CA G
Sbjct: 340 EEKIQLDVVSWSAVIAGYAQRGLGYEALNVFRQMQVCGLRPNEVTLVSLLSGCASVG 396
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 110 WSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI 169
W+ LI VR G +L++F MR P+ T V AC L + G +H V
Sbjct: 107 WNALIRRAVRLGLLQHSLSLFRTMRRLNWSPDHYTFPFVFKACGELPSFLHGSCIHAIVC 166
Query: 170 DNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM-KPSDVFIWNSMIGGFACHGLVKE 228
+ + ++V MY +CGA A +F LM + D+ WNSMI + G +K
Sbjct: 167 STGFDSNVFVCNAVVAMYGRCGASSYARQMFDELLMGEVFDLVSWNSMIAVYLQSGDLKS 226
Query: 229 SLDLFSEMHIVG---VKPDEITYLNLLSACAHGG 259
++LF M VG + PD ++ +N+L ACA G
Sbjct: 227 GIELFRRMWKVGEFDIVPDAVSLVNVLPACASMG 260
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 71/162 (43%), Gaps = 32/162 (19%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESD-RFVSNSLIHMYSSFRDIPNA 64
V P+ T A A L G IH ++ + Y+ D +V+N LI MYS D+ A
Sbjct: 491 VKPNAFTISCALMACARLAALRFGRQIHAFVLRDQYDCDVLYVANCLIDMYSKSGDMDAA 550
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
R VFD + +N VSW S++ GY G +
Sbjct: 551 RLVFDNMKHRNTVSWTSLMTGYGM-------------------------------HGHGE 579
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHH 166
EA+ VF+EMR G + +T + VL AC+H G +D+G H
Sbjct: 580 EAIKVFDEMRREGLVSDGITFLVVLYACSHSGMVDEGIKYFH 621
>30147.m014375 pentatricopeptide repeat-containing protein, putative
Length = 543
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 148/263 (56%), Gaps = 31/263 (11%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + G+FPD +T +A A L + ++H Y + + + FV+NS++ M++
Sbjct: 232 MQQHGLFPDEVTMVSVASAIGQLWDAKWAQSVHAYAIRRSFLKEIFVANSILAMHT---- 287
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
KCG++ + +FD+M E++V+SW+ ++ GY +
Sbjct: 288 ---------------------------KCGNMEKSCLIFDMMDERNVISWNSMLSGYTQN 320
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G EAL +F++MR SG +PN VT + ++ ACA+LG+ G H +++D+++ + + LR
Sbjct: 321 GQASEALFLFDKMRDSGCEPNSVTALIMVAACAYLGSRHLGGKFHDFILDSKMKIDMNLR 380
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+DMYAKCG ++ A+ +F +V WN +I G+ HG KE+L L+S M
Sbjct: 381 NALMDMYAKCGDLKTAVEMFNDVHPSERNVSSWNVLISGYGMHGHGKEALRLYSRMQEES 440
Query: 241 VKPDEITYLNLLSACAHGGLVKE 263
V+P+ IT+ ++LSAC+H GL+ E
Sbjct: 441 VEPNHITFTSILSACSHAGLIDE 463
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 152/327 (46%), Gaps = 34/327 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R GV ++ TFPF+ KA A G HG KA ++SD +V +L+ MY
Sbjct: 131 MRRAGVSSNNYTFPFIFKACASNSLLLQGKVAHGDAVKADFDSDVYVKAALVDMY----- 185
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AKCG R++FD MP +D++ W+ +I Y +
Sbjct: 186 --------------------------AKCGQFCDGRKIFDEMPVKDLVCWTAMITAYEQG 219
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
DEAL + +M+ G P+EVTMVSV A L + +H Y I + +
Sbjct: 220 EKPDEALILLRKMQQHGLFPDEVTMVSVASAIGQLWDAKWAQSVHAYAIRRSFLKEIFVA 279
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
S++ M+ KCG ++++ +F +M +V WNSM+ G+ +G E+L LF +M G
Sbjct: 280 NSILAMHTKCGNMEKSCLIF--DMMDERNVISWNSMLSGYTQNGQASEALFLFDKMRDSG 337
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
+P+ +T L +++ACA+ G F D + + M ++D+ A+ G + A
Sbjct: 338 CEPNSVTALIMVAACAYLGSRHLGGKFHDFILDSKMKIDMNLRNALMDMYAKCGDLKTAV 397
Query: 301 QFLCQI-PIQPTASMLGALLNGCMNHG 326
+ + P + S L++G HG
Sbjct: 398 EMFNDVHPSERNVSSWNVLISGYGMHG 424
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 8/184 (4%)
Query: 86 YAKCGDISMARQVFDLM----PEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN 141
YAK G ++ AR +FD + + W+ +I Y G E L ++ MR +G N
Sbjct: 80 YAKFGYLNCARSLFDGINIRGDNRSSFLWNTMIRAYANAGLCFETLELYMLMRRAGVSSN 139
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR 201
T + ACA L +G++ H + + + ++ +LVDMYAKCG + +F
Sbjct: 140 NYTFPFIFKACASNSLLLQGKVAHGDAVKADFDSDVYVKAALVDMYAKCGQFCDGRKIFD 199
Query: 202 SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
M D+ W +MI + E+L L +M G+ PDE+T +++ SA G L
Sbjct: 200 E--MPVKDLVCWTAMITAYEQGEKPDEALILLRKMQQHGLFPDEVTMVSVASAI--GQLW 255
Query: 262 KEAW 265
W
Sbjct: 256 DAKW 259
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 80 NSMLDGYAKCGDISMARQVF-DLMP-EQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG 137
N+++D YAKCGD+ A ++F D+ P E++V SW+ LI GY G EAL ++ M+
Sbjct: 381 NALMDMYAKCGDLKTAVEMFNDVHPSERNVSSWNVLISGYGMHGHGKEALRLYSRMQEES 440
Query: 138 PKPNEVTMVSVLCACAHLGALDKGR 162
+PN +T S+L AC+H G +D+GR
Sbjct: 441 VEPNHITFTSILSACSHAGLIDEGR 465
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 6/175 (3%)
Query: 138 PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL-PLTLVLRTSLVDMYAKCGAIQEA 196
P E+ +++ C L L + +H + N L + L ++ YAK G + A
Sbjct: 33 PDSTEIVYDNLVKFCDGLAVL---KQIHSALTTNSLITKSPHLAAQIIIKYAKFGYLNCA 89
Query: 197 LHVFRSGLMKPSD--VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
+F ++ + F+WN+MI +A GL E+L+L+ M GV + T+ + A
Sbjct: 90 RSLFDGINIRGDNRSSFLWNTMIRAYANAGLCFETLELYMLMRRAGVSSNNYTFPFIFKA 149
Query: 255 CAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ 309
CA L+ + K A +VD+ A+ GQ + + ++P++
Sbjct: 150 CASNSLLLQGKVAHGDAVKADFDSDVYVKAALVDMYAKCGQFCDGRKIFDEMPVK 204
>29685.m000500 pentatricopeptide repeat-containing protein, putative
Length = 374
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 144/245 (58%), Gaps = 3/245 (1%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
MLR + P++ +F FL + L G+ IH ++ K G+ D +V N+LIH + +
Sbjct: 114 MLRRFIRPNNYSFTFLFQGCGKGLGFIEGVQIHCHVIKFGFCEDVYVRNALIHFFFACCR 173
Query: 61 IPNARKVFDGIPVK-NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
+ +++VF+ P + ++V+WN+ML G+A+ G +++ ++FD M E+DV+SW+ +I YV
Sbjct: 174 VECSKQVFEENPRRCDIVTWNAMLAGFARDGQVAVVEKMFDEMYERDVISWNTMIMAYVH 233
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
G +E L F MR S P+E T V+VL A A LG L+ GR++ + + +T L
Sbjct: 234 NGKLEEGLECFRRMRESELVPDEATFVTVLSASAQLGLLEHGRLVRSIIDALNVTMTSAL 293
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
T+L+DMYAKCG I++ +F + D+ WN MI G A HGL KE++ LF
Sbjct: 294 GTALLDMYAKCGCIEQCRLLFDK--LPQRDISTWNVMICGLASHGLGKEAISLFERFLSK 351
Query: 240 GVKPD 244
G++P
Sbjct: 352 GLRPS 356
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 91/232 (39%), Gaps = 31/232 (13%)
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
E++ + M +PN + + C +G +H +VI + +R +L+
Sbjct: 106 ESVVFYSSMLRRFIRPNNYSFTFLFQGCGKGLGFIEGVQIHCHVIKFGFCEDVYVRNALI 165
Query: 185 DMYAKCGAIQEALHVF--------------------RSGL----------MKPSDVFIWN 214
+ C ++ + VF R G M DV WN
Sbjct: 166 HFFFACCRVECSKQVFEENPRRCDIVTWNAMLAGFARDGQVAVVEKMFDEMYERDVISWN 225
Query: 215 SMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN 274
+MI + +G ++E L+ F M + PDE T++ +LSA A GL++ +
Sbjct: 226 TMIMAYVHNGKLEEGLECFRRMRESELVPDEATFVTVLSASAQLGLLEHGRLVRSIIDAL 285
Query: 275 GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
+T S ++D+ A+ G + + ++P Q S ++ G +HG
Sbjct: 286 NVTMTSALGTALLDMYAKCGCIEQCRLLFDKLP-QRDISTWNVMICGLASHG 336
>30032.m000454 pentatricopeptide repeat-containing protein, putative
Length = 359
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 138/224 (61%), Gaps = 3/224 (1%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
N++I + D+ ARKVFD +P +N+VS+ M+DGYAK GD++ AR +F+ P++DV+
Sbjct: 113 NAMIDGWVKAGDLLLARKVFDEMPERNVVSFTVMIDGYAKAGDMTTARDLFERAPKRDVI 172
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
+WS LI GY + G +EA+ +F EM KP+E MVS++ AC+ LG+LD R Y+
Sbjct: 173 AWSALISGYAQNGQPNEAVRIFLEMESKNVKPDEYIMVSLMSACSQLGSLDLARWADCYL 232
Query: 169 IDNELPLTLV-LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
+ + + + +L+DM AKCG ++ A +F M D+ + SMI G + HG +
Sbjct: 233 SKSSIDIGQTHVIAALIDMNAKCGNMERAKKLFEE--MPKRDLITYCSMIQGLSIHGCAE 290
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL 271
+++ LF+ M + PDE + +L+AC+ GGLV E ++F+ +
Sbjct: 291 QAVGLFNRMLNESLIPDEAAFTVVLTACSRGGLVDEGRHYFETM 334
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 162/326 (49%), Gaps = 48/326 (14%)
Query: 7 FPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARK 66
+PD T+P L + + + + G +HG + G D +V +SL+ Y ++I +ARK
Sbjct: 9 WPDKYTYPSLIRVFSSEFRLKEGGIVHGSAIRCGVSDDVYVGSSLVDFYGKCKEILSARK 68
Query: 67 VFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEA 126
+FD + KN+VSW +M+ GY GD+ A ++FD MPE+++ SW+ +IDG+V+ GD A
Sbjct: 69 MFDEMTQKNVVSWTAMVVGYLNVGDLGNAERLFDQMPERNLKSWNAMIDGWVKAGDLLLA 128
Query: 127 LAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDM 186
VF+EM P+ N V+ T ++D
Sbjct: 129 RKVFDEM----PERNVVSF-----------------------------------TVMIDG 149
Query: 187 YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
YAK G + A +F + DV W+++I G+A +G E++ +F EM VKPDE
Sbjct: 150 YAKAGDMTTARDLFERAPKR--DVIAWSALISGYAQNGQPNEAVRIFLEMESKNVKPDEY 207
Query: 247 TYLNLLSACAHGGLVKEAWYFFDC-LGKNGMTPKSEHY-ACMVDVMARAGQVAEAYQFLC 304
++L+SAC+ G + A + DC L K+ + H A ++D+ A+ G + A +
Sbjct: 208 IMVSLMSACSQLGSLDLA-RWADCYLSKSSIDIGQTHVIAALIDMNAKCGNMERAKKLFE 266
Query: 305 QIP----IQPTASMLGALLNGCMNHG 326
++P I + + G ++GC
Sbjct: 267 EMPKRDLITYCSMIQGLSIHGCAEQA 292
>29632.m000078 pentatricopeptide repeat-containing protein, putative
Length = 446
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 166/327 (50%), Gaps = 34/327 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M +G+ P++ TFPFL + A L+ G H + K G+ +D +++SLI MY
Sbjct: 118 MKSLGLKPNNFTFPFLFISCANLVALHCGQIAHSLVLKMGFNNDSHINHSLITMY----- 172
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AKC + AR+VFD + E+D++SW+ +I GY +
Sbjct: 173 --------------------------AKCSKLDSARKVFDEILERDIVSWNSMISGYTKM 206
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G EA+ +F EMR G +P E+T+VS+L AC LG L G+ + + D ++ L
Sbjct: 207 GFAREAVRLFMEMREQGFEPVEMTLVSILGACGDLGDLALGKWVEALIGDKKMELNSYTA 266
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
++L+DMY KCG + A VF + M D+ WN+MI G+A +G E++ LF+ M G
Sbjct: 267 SALIDMYGKCGDLMSARRVFDN--MAEKDIVTWNAMITGYAQNGASDEAMTLFNVMREAG 324
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
+ P+EIT + +LSACA G + + + G+ + +VD+ A+ G + A
Sbjct: 325 ITPNEITMVVVLSACASIGALDLGKWVEMYASQRGLQHDVYVASALVDMYAKCGSLDNAL 384
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGK 327
+ +P + S A+++ HG+
Sbjct: 385 RVFENMPHKNEVS-WNAMISALAFHGR 410
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 119/185 (64%), Gaps = 3/185 (1%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
N + ++++D Y KCGD+ AR+VFD M E+D+++W+ +I GY + G DEA+ +F MR
Sbjct: 262 NSYTASALIDMYGKCGDLMSARRVFDNMAEKDIVTWNAMITGYAQNGASDEAMTLFNVMR 321
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
+G PNE+TMV VL ACA +GALD G+ + Y L + + ++LVDMYAKCG++
Sbjct: 322 EAGITPNEITMVVVLSACASIGALDLGKWVEMYASQRGLQHDVYVASALVDMYAKCGSLD 381
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIVGVKPDEITYLNLLS 253
AL VF + M + WN+MI A HG +E+L LFS M + V+P++IT++ + +
Sbjct: 382 NALRVFEN--MPHKNEVSWNAMISALAFHGRAREALSLFSRMLNGSTVRPNDITFIGVFA 439
Query: 254 ACAHG 258
AC G
Sbjct: 440 ACRFG 444
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 6/289 (2%)
Query: 73 VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK-GDYDEALAVFE 131
+ +L N +L D + A +F MP + +++ +I G +Y A+ ++
Sbjct: 57 INSLSKPNFLLPRIIDLKDFAYASLLFTQMPNPNDYAFNVMIRGLTTTWRNYSLAIQLYY 116
Query: 132 EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG 191
+M+ G KPN T + +CA+L AL G++ H V+ + SL+ MYAKC
Sbjct: 117 QMKSLGLKPNNFTFPFLFISCANLVALHCGQIAHSLVLKMGFNNDSHINHSLITMYAKCS 176
Query: 192 AIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
+ A VF L + D+ WNSMI G+ G +E++ LF EM G +P E+T +++
Sbjct: 177 KLDSARKVFDEILER--DIVSWNSMISGYTKMGFAREAVRLFMEMREQGFEPVEMTLVSI 234
Query: 252 LSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPT 311
L AC G + + +G M S + ++D+ + G + A + + +
Sbjct: 235 LGACGDLGDLALGKWVEALIGDKKMELNSYTASALIDMYGKCGDLMSARRVFDNMAEKDI 294
Query: 312 ASMLGALLNGCMNHGKLDLAETVGRKLIE--LEPHQDGRYVGLSNVYAI 358
+ A++ G +G D A T+ + E + P++ V LS +I
Sbjct: 295 VT-WNAMITGYAQNGASDEAMTLFNVMREAGITPNEITMVVVLSACASI 342
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 32/153 (20%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G+ P+ +T + A A + +LG + Y ++ G + D +V+++L+ MY+
Sbjct: 320 MREAGITPNEITMVVVLSACASIGALDLGKWVEMYASQRGLQHDVYVASALVDMYAKCGS 379
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ NA +VF+ +P KN VSWN+M+ A G R
Sbjct: 380 LDNALRVFENMPHKNEVSWNAMISALA--------------------------FHGRAR- 412
Query: 121 GDYDEALAVFEEM-RVSGPKPNEVTMVSVLCAC 152
EAL++F M S +PN++T + V AC
Sbjct: 413 ----EALSLFSRMLNGSTVRPNDITFIGVFAAC 441
>30178.m000869 pentatricopeptide repeat-containing protein, putative
Length = 507
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 145/252 (57%), Gaps = 2/252 (0%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ + + PD+ + +A L + G+ +H + K G S R + L+ Y
Sbjct: 226 MINLSIVPDNYVITSVLEACGFQLALKQGIQVHCQVLKLGLSSKRLMRLKLMKFYGKCGS 285
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +A ++FD +P +++V+ M++ Y + G I A +VF+L +D + W+ +IDG VR
Sbjct: 286 LKDAERLFDEMPERDVVASTIMINSYFEHGLIQEAIRVFNLTKSKDTVCWTAVIDGLVRN 345
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G+ + AL VF EM+ +PNEVT+V VL AC+ LG L+ GR +H Y+ + + +
Sbjct: 346 GEMNRALEVFREMQREDVRPNEVTIVCVLSACSQLGTLELGRWVHSYMGKYGIGINHFVG 405
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L++MY++CG I EA VF MK +V +NSMI GF+ HG E+++LF M G
Sbjct: 406 GALINMYSRCGDIDEAWRVFEE--MKERNVITYNSMIVGFSLHGKSSEAIELFRGMTKQG 463
Query: 241 VKPDEITYLNLL 252
++P +T+++ L
Sbjct: 464 LEPTSVTFVDKL 475
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 128/286 (44%), Gaps = 36/286 (12%)
Query: 91 DISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLC 150
I+ A ++F +V ++ LIDG+V G + + ++ +M P+ + SVL
Sbjct: 184 SINYASKIFSFTENPNVYLYTALIDGFVLSGSFISGIHLYYQMINLSIVPDNYVITSVLE 243
Query: 151 ACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA------------------ 192
AC AL +G +H V+ L ++R L+ Y KCG+
Sbjct: 244 ACGFQLALKQGIQVHCQVLKLGLSSKRLMRLKLMKFYGKCGSLKDAERLFDEMPERDVVA 303
Query: 193 -------------IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
IQEA+ VF L K D W ++I G +G + +L++F EM
Sbjct: 304 STIMINSYFEHGLIQEAIRVF--NLTKSKDTVCWTAVIDGLVRNGEMNRALEVFREMQRE 361
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
V+P+E+T + +LSAC+ G ++ + +GK G+ ++++ +R G + EA
Sbjct: 362 DVRPNEVTIVCVLSACSQLGTLELGRWVHSYMGKYGIGINHFVGGALINMYSRCGDIDEA 421
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE--LEP 343
++ ++ + +++ G HGK A + R + + LEP
Sbjct: 422 WRVFEEMK-ERNVITYNSMIVGFSLHGKSSEAIELFRGMTKQGLEP 466
>30147.m014385 pentatricopeptide repeat-containing protein, putative
Length = 318
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 143/258 (55%), Gaps = 35/258 (13%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGY 86
LG IH I G+ D + + LI MY+ + NAR+VFD IPV+NLV W S
Sbjct: 62 NLGKKIHALIVVNGFVLDVILGSCLIDMYAKCAQMDNAREVFDKIPVRNLVCWTS----- 116
Query: 87 AKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMV 146
LI GY R Y E L +F E++++G + +
Sbjct: 117 --------------------------LIVGYARLNMYKEGLELFRELQIAGVIADAALVA 150
Query: 147 SVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK 206
V+ AC H+GAL +GR +H Y N + + L +R +L+DMY+KCG I++A +F +G++K
Sbjct: 151 CVVSACGHMGALAQGRWVHTYCERNGIDMNLSVRNALIDMYSKCGDIEKAHQIF-NGMVK 209
Query: 207 PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG-VKPDEITYLNLLSACAHGGLVKEAW 265
D+F W +MI GFA +G E+L+LF+++ VKP+E+T+L +LSAC+HGG V + +
Sbjct: 210 K-DLFSWTAMISGFAMNGYSDEALELFAQVETCNDVKPNEVTFLGVLSACSHGGFVDKGF 268
Query: 266 YFFDCLGK-NGMTPKSEH 282
+F + + +TP+ +
Sbjct: 269 QYFKAMSQIYHITPQKSY 286
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 107/200 (53%), Gaps = 3/200 (1%)
Query: 105 QDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG-PKPNEVTMVSVLCACAHLGALDKGRM 163
+DV+SW+ +I GY++ +AL VF E+ + +EVT+V+ L AC G ++ G+
Sbjct: 7 RDVVSWNSMISGYLQCERNGDALKVFGELLNDNFVRFDEVTLVNALTACGRTGFVNLGKK 66
Query: 164 MHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
+H ++ N L ++L + L+DMYAKC + A VF + ++ W S+I G+A
Sbjct: 67 IHALIVVNGFVLDVILGSCLIDMYAKCAQMDNAREVFDK--IPVRNLVCWTSLIVGYARL 124
Query: 224 GLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHY 283
+ KE L+LF E+ I GV D ++SAC H G + + + +NG+
Sbjct: 125 NMYKEGLELFRELQIAGVIADAALVACVVSACGHMGALAQGRWVHTYCERNGIDMNLSVR 184
Query: 284 ACMVDVMARAGQVAEAYQFL 303
++D+ ++ G + +A+Q
Sbjct: 185 NALIDMYSKCGDIEKAHQIF 204
>28672.m000057 pentatricopeptide repeat-containing protein, putative
Length = 561
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 173/311 (55%), Gaps = 12/311 (3%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
NS++ Y+KCGD+ +R VFD E+ ++SW+ ++ G V+ G EAL + + R+
Sbjct: 251 NSIIAMYSKCGDLRFSRIVFDQTTEKSLVSWTAMVSGCVQNGCSREALDLAIKARLEENY 310
Query: 140 P-NEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
+ V +V+ L A + L + + +H Y+++ +++ SL+ Y+KCG I A
Sbjct: 311 SFDSVMLVNALTASSELVDKEFCQQLHCYILETGFSQYRLVQNSLISAYSKCGNIDLAHI 370
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHG 258
VF+ + +V WN++I G+ +G + +L L+ EM G PD TY +LSAC+H
Sbjct: 371 VFKE-MDSLQNVVSWNAIINGYGINGHGEVALALYHEMRKGGEDPDSATYSCILSACSHA 429
Query: 259 GLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAEA--YQFLCQIPIQPTASML 315
GL+++ F+ + K N + P+ +HY C++D++ RAG +++ ++FL ++
Sbjct: 430 GLIRDGLMIFNRMVKDNKIRPRQQHYGCVIDLLMRAGCLSDTNDWKFL----EDTCPNVW 485
Query: 316 GALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERM 375
ALL+GC HG ++LAE + L+E P + V LSNVY R+ A S+R
Sbjct: 486 KALLSGCALHGNVELAELAAKYLLEKNPGESVVLVLLSNVYVSVGRFQDAESLRLT---K 542
Query: 376 GVKKSPGYSFV 386
G K+PG S++
Sbjct: 543 GFVKNPGISYL 553
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 106/230 (46%), Gaps = 33/230 (14%)
Query: 3 RVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIP 62
+ G+ P+ T L K L + L +++G I K G SD V+NS+++MYS F+D+
Sbjct: 104 KFGLVPNVATVLTLIKGCVALEIKMLCESVYGLIFKFGLSSDVNVNNSVVNMYSRFQDLN 163
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
A KV FD M +DV+SW+ ++ +
Sbjct: 164 AAAKV-------------------------------FDEMKFKDVISWTTMMAVLIDLEC 192
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTS 182
+AL + +M+ S + V ++ ++ ACA LG L KGR H + L L S
Sbjct: 193 ASDALVLLSKMKDSMLDLDSVVLMHLISACAILGDLGKGRQCHAQAVIRGFKSELPLVNS 252
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDL 232
++ MY+KCG ++ + VF K + W +M+ G +G +E+LDL
Sbjct: 253 IIAMYSKCGDLRFSRIVFDQTTEKS--LVSWTAMVSGCVQNGCSREALDL 300
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 110/237 (46%), Gaps = 38/237 (16%)
Query: 19 ASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGI-PVKNLV 77
AS+ L+ +E +H YI + G+ R V NSLI YS +I A VF + ++N+V
Sbjct: 323 ASSELVDKEFCQQLHCYILETGFSQYRLVQNSLISAYSKCGNIDLAHIVFKEMDSLQNVV 382
Query: 78 SWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG 137
SWN++++GY I+G+ + ALA++ EMR G
Sbjct: 383 SWNAIINGYG--------------------------INGH-----GEVALALYHEMRKGG 411
Query: 138 PKPNEVTMVSVLCACAHLGALDKGRMMHHYVI-DNELPLTLVLRTSLVDMYAKCGAIQEA 196
P+ T +L AC+H G + G M+ + ++ DN++ ++D+ + G + +
Sbjct: 412 EDPDSATYSCILSACSHAGLIRDGLMIFNRMVKDNKIRPRQQHYGCVIDLLMRAGCLSD- 470
Query: 197 LHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
++ + +W +++ G A HG V+ L + +++ P E L LLS
Sbjct: 471 --TNDWKFLEDTCPNVWKALLSGCALHGNVE--LAELAAKYLLEKNPGESVVLVLLS 523
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 2/184 (1%)
Query: 73 VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEE 132
V + + +MLD YAKCG+ + +VF + +++ + + G + G E +F+E
Sbjct: 42 VSDFIVGTAMLDAYAKCGNALESYKVFKELNNAGLITCNATLAGLIANGLCIEGFMLFKE 101
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
R G PN T+++++ C L ++ + L + + S+V+MY++
Sbjct: 102 FRKFGLVPNVATVLTLIKGCVALEIKMLCESVYGLIFKFGLSSDVNVNNSVVNMYSRFQD 161
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
+ A VF MK DV W +M+ ++L L S+M + D + ++L+
Sbjct: 162 LNAAAKVFDE--MKFKDVISWTTMMAVLIDLECASDALVLLSKMKDSMLDLDSVVLMHLI 219
Query: 253 SACA 256
SACA
Sbjct: 220 SACA 223
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
MR SG PN ++V L + L L +H ++ L ++ T+++D YAKCG
Sbjct: 1 MRNSGLAPNSFSVVGALLSAIGLCDLMLASSIHGLILKRGLVSDFIVGTAMLDAYAKCGN 60
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
E+ VF+ + + + N+ + G +GL E LF E G+ P+ T L L+
Sbjct: 61 ALESYKVFKE--LNNAGLITCNATLAGLIANGLCIEGFMLFKEFRKFGLVPNVATVLTLI 118
Query: 253 SAC 255
C
Sbjct: 119 KGC 121
>30138.m003882 pentatricopeptide repeat-containing protein, putative
Length = 515
Score = 164 bits (416), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 187/342 (54%), Gaps = 11/342 (3%)
Query: 1 MLRVGVFP-DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFR 59
M+R GVF + +TF + ++ +LG IHG+I K G+ FV + L+ MY+
Sbjct: 131 MMRDGVFNLNRITFSTMLILASSRELVDLGRQIHGHIMKFGFGGYVFVGSPLVDMYAKTG 190
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
+ A+KVFD +P +N+V N+M+ G K G + ++++F M E+D +SW+ +I G V+
Sbjct: 191 LVYEAKKVFDEMPDRNVVMHNTMITGLLKFGMMEDSKRLFHGMKERDNISWTTMITGLVQ 250
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
G +EA+ F +MR+ G ++ T SVL AC L AL +G+ +H ++I ++ + +
Sbjct: 251 NGLEEEAIDFFRQMRLDGIGMDQYTFGSVLTACGGLTALREGKQVHAFIIRSDCTDNVFV 310
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
++LVDMY KC ++ A VF+ MK +V W +++ G+ +G +E++ +F +M
Sbjct: 311 GSALVDMYCKCKILRYAEAVFKR--MKYKNVVSWTAILVGYGQNGFSEEAVKVFCDMQRN 368
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
G++PD+ T +++S+CA+ ++E F +G+ +V + + G + ++
Sbjct: 369 GIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISSITVSNALVTLYGKCGSIEDS 428
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIEL 341
+ ++ + S AL++G GK R+ IEL
Sbjct: 429 DRLFNEMNFRDEVSWT-ALISGYAQFGK-------ARETIEL 462
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 139/275 (50%), Gaps = 34/275 (12%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ D TF + A L G +H +I ++ + FV ++L+ MY
Sbjct: 268 GIGMDQYTFGSVLTACGGLTALREGKQVHAFIIRSDCTDNVFVGSALVDMY--------- 318
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
KC + A VF M ++V+SW+ ++ GY + G +
Sbjct: 319 ----------------------CKCKILRYAEAVFKRMKYKNVVSWTAILVGYGQNGFSE 356
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
EA+ VF +M+ +G +P++ T+ SV+ +CA+L +L++G H + + L ++ + +LV
Sbjct: 357 EAVKVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISSITVSNALV 416
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
+Y KCG+I+++ +F M D W ++I G+A G +E+++LF M G+KPD
Sbjct: 417 TLYGKCGSIEDSDRLFNE--MNFRDEVSWTALISGYAQFGKARETIELFERMLAHGLKPD 474
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDC-LGKNGMTP 278
+T++ +L AC+ GLV FFD L + G+ P
Sbjct: 475 AVTFIGVLLACSRAGLVARGQQFFDSMLEEYGIIP 509
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 131/260 (50%), Gaps = 32/260 (12%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGD 91
+H +I K + F+ N+L++ Y +I AR +FDG+P +N SWN++L Y+K G
Sbjct: 30 LHCHIIKTLANPEPFLYNNLMNAYGKLGNIAYARHLFDGMPQRNSFSWNTILSAYSKSGH 89
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP-KPNEVTMVSVLC 150
+ +++F LMP +D +SW+ ++ GY G +A+ + M G N +T ++L
Sbjct: 90 LPKMKEIFSLMPNRDGVSWNTILSGYASYGSVSDAVKAYNSMMRDGVFNLNRITFSTMLI 149
Query: 151 ACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR--------- 201
+ +D GR +H +++ + + + LVDMYAK G + EA VF
Sbjct: 150 LASSRELVDLGRQIHGHIMKFGFGGYVFVGSPLVDMYAKTGLVYEAKKVFDEMPDRNVVM 209
Query: 202 -----SGL---------------MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV 241
+GL MK D W +MI G +GL +E++D F +M + G+
Sbjct: 210 HNTMITGLLKFGMMEDSKRLFHGMKERDNISWTTMITGLVQNGLEEEAIDFFRQMRLDGI 269
Query: 242 KPDEITYLNLLSACAHGGLV 261
D+ T+ ++L+AC GGL
Sbjct: 270 GMDQYTFGSVLTAC--GGLT 287
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 31/162 (19%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R G+ PD T + + A L E G H +G S VSN+L+ +Y
Sbjct: 365 MQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISSITVSNALVTLYGKCGS 424
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I ++ ++F+ + ++ VSW +++ GYA+ G AR+ +L
Sbjct: 425 IEDSDRLFNEMNFRDEVSWTALISGYAQFGK---ARETIEL------------------- 462
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR 162
FE M G KP+ VT + VL AC+ G + +G+
Sbjct: 463 ---------FERMLAHGLKPDAVTFIGVLLACSRAGLVARGQ 495
>29844.m003272 pentatricopeptide repeat-containing protein, putative
Length = 477
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/250 (36%), Positives = 138/250 (55%), Gaps = 6/250 (2%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLA--IHGYITKAGYESDRFVSNSLIHMYSSF 58
M V PD + + SAC + LG +H I + + D + + LI +Y+
Sbjct: 216 MRSSNVEPDKMVLSTII--SACARAKNLGYGKEVHDLIIENNFALDPHLESGLISLYAGC 273
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
+ A+++F + +NLV +M+ GY K G I AR +F+ M E+D++ WS +I GY
Sbjct: 274 GCMDMAKELFTNMSSRNLVVSTTMVSGYLKVGRIEDARLIFNQMDEKDLICWSIMISGYA 333
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
EAL +F EM+ G +P+EVTM+SV+ ACAHLG LD+ + +H +V N L
Sbjct: 334 ESDQPQEALHLFNEMQFLGIEPDEVTMLSVISACAHLGVLDQAKRIHMFVDKNGFGKALS 393
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+ +L+DMYAKCG ++ A VF M+ +V W SMI FA HG +L+ F +M
Sbjct: 394 VNNALIDMYAKCGCLEAARAVFEK--MQIRNVISWTSMINAFAIHGDANSALNYFHQMKE 451
Query: 239 VGVKPDEITY 248
V+P+ +T+
Sbjct: 452 ENVEPNAVTF 461
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 167/352 (47%), Gaps = 61/352 (17%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D +FPF+ KA+A + G+ IHG + K + D F+ L+ MY
Sbjct: 123 DKFSFPFILKAAAKIAALNDGMEIHGVLAKLDFYKDPFLQTGLMGMY------------- 169
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
CG I AR VFD M +DV++WS +I+GY + G +D+AL
Sbjct: 170 ------------------VGCGKILEARLVFDKMSYRDVVTWSTMINGYYQGGHFDDALQ 211
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
+FEEMR S +P+++ + +++ ACA L G+ +H +I+N L L + L+ +YA
Sbjct: 212 LFEEMRSSNVEPDKMVLSTIISACARAKNLGYGKEVHDLIIENNFALDPHLESGLISLYA 271
Query: 189 KCGAIQEALHVFR--------------SGLMK---------------PSDVFIWNSMIGG 219
CG + A +F SG +K D+ W+ MI G
Sbjct: 272 GCGCMDMAKELFTNMSSRNLVVSTTMVSGYLKVGRIEDARLIFNQMDEKDLICWSIMISG 331
Query: 220 FACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPK 279
+A +E+L LF+EM +G++PDE+T L+++SACAH G++ +A + KNG
Sbjct: 332 YAESDQPQEALHLFNEMQFLGIEPDEVTMLSVISACAHLGVLDQAKRIHMFVDKNGFGKA 391
Query: 280 SEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
++D+ A+ G + A ++ I+ S +++N HG + A
Sbjct: 392 LSVNNALIDMYAKCGCLEAARAVFEKMQIRNVISW-TSMINAFAIHGDANSA 442
>28097.m000054 pentatricopeptide repeat-containing protein, putative
Length = 513
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 126/210 (60%), Gaps = 2/210 (0%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
E + N++I Y + + A+++F+ +P +N+ SWN+M+ GYA+ G++ AR +FD
Sbjct: 302 EKNSVSWNAMIAGYVQCKRMDMAKELFEAMPFRNISSWNTMITGYAQSGNVPHARNLFDR 361
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
MP++D +SWS +I GYV+ G +EA+ ++ EM+ G N + SVL ACA + ALD G
Sbjct: 362 MPQRDSISWSAMIAGYVQNGCNEEAVHLYVEMKRDGESLNRSSFTSVLTACADIAALDLG 421
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA 221
+ H +++ + +L+ MY KCG+I EA F + D+ WN+MI G+A
Sbjct: 422 KQFHGWLVKVGYQTGCYVGNALLAMYCKCGSIDEADDAFHE--ITDKDLISWNTMIYGYA 479
Query: 222 CHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
HG KE+L +F M VGVKPDE T + +
Sbjct: 480 RHGFGKEALIVFESMKTVGVKPDEATMVTV 509
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 123/226 (54%), Gaps = 23/226 (10%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
N L+ + + + +AR+VFD IPV++ VSWN+M+ GYA+ G++ AR++F+ P QDV
Sbjct: 216 NCLMGGFVKKKRLVDARRVFDRIPVRDEVSWNTMITGYAQNGELEEARKLFEESPTQDVF 275
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
+W+ ++ GYV+ G DEA ++F++M P+ N V+ +++ +D + +
Sbjct: 276 TWTAMVSGYVQNGMVDEARSIFDKM----PEKNSVSWNAMIAGYVQCKRMDMAKELFE-- 329
Query: 169 IDNELPL-TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
+P + +++ YA+ G + A ++F M D W++MI G+ +G +
Sbjct: 330 ---AMPFRNISSWNTMITGYAQSGNVPHARNLF--DRMPQRDSISWSAMIAGYVQNGCNE 384
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACA-----------HGGLVK 262
E++ L+ EM G + ++ ++L+ACA HG LVK
Sbjct: 385 EAVHLYVEMKRDGESLNRSSFTSVLTACADIAALDLGKQFHGWLVK 430
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 149/289 (51%), Gaps = 30/289 (10%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
E D F N ++ Y +++ +AR +F+ +P +++VSWN+ML GYA+ G I+ AR++FD
Sbjct: 116 ERDLFTWNVMLSGYVRNKNLTDARGLFERMPRRDVVSWNAMLSGYAQNGFIAEAREIFDE 175
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
MP ++ +SW+ L+ YV+ G ++A +FE +++ V C G + K
Sbjct: 176 MPVKNSISWNGLLAAYVQNGRIEDARRLFE---------SKMDWDVVSWNCLMGGFVKKK 226
Query: 162 RMMHHYVIDNELPLT-LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
R++ + + +P+ V +++ YA+ G ++EA +F + DVF W +M+ G+
Sbjct: 227 RLVDARRVFDRIPVRDEVSWNTMITGYAQNGELEEARKLFEESPTQ--DVFTWTAMVSGY 284
Query: 221 ACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA---CAHGGLVKEAWYFFDCLGKNGMT 277
+G+V E+ +F +M + + +++ +++ C + KE F+ + ++
Sbjct: 285 VQNGMVDEARSIFDKMP----EKNSVSWNAMIAGYVQCKRMDMAKE---LFEAMPFRNIS 337
Query: 278 PKSEHYACMVDVMARAGQVAEAYQFLCQIP----IQPTASMLGALLNGC 322
+ M+ A++G V A ++P I +A + G + NGC
Sbjct: 338 S----WNTMITGYAQSGNVPHARNLFDRMPQRDSISWSAMIAGYVQNGC 382
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 146/285 (51%), Gaps = 25/285 (8%)
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
+A +VF+ +P ++ V++N+M+ GY G +AR++FD MPE+D+ +W+ ++ GYVR +
Sbjct: 75 SALQVFNTMPRRSTVTYNAMISGYLSNGRFDLAREMFDKMPERDLFTWNVMLSGYVRNKN 134
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL-TLVLRT 181
+A +FE M P+ + V+ ++L A G + + R I +E+P+ +
Sbjct: 135 LTDARGLFERM----PRRDVVSWNAMLSGYAQNGFIAEARE-----IFDEMPVKNSISWN 185
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV 241
L+ Y + G I++A +F S + DV WN ++GGF + ++ +F + +
Sbjct: 186 GLLAAYVQNGRIEDARRLFESKM--DWDVVSWNCLMGGFVKKKRLVDARRVFDRIPV--- 240
Query: 242 KPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQ 301
DE+++ +++ A G ++EA F+ T + MV + G V EA
Sbjct: 241 -RDEVSWNTMITGYAQNGELEEARKLFE----ESPTQDVFTWTAMVSGYVQNGMVDEARS 295
Query: 302 FLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQD 346
++P + + S A++ G + ++D+A ++L E P ++
Sbjct: 296 IFDKMPEKNSVS-WNAMIAGYVQCKRMDMA----KELFEAMPFRN 335
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 120/272 (44%), Gaps = 54/272 (19%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
++V+WN + + + G A QVF+ MP + ++++ +I GY+ G +D A +F++M
Sbjct: 56 DIVNWNMAITTHMRNGQCHSALQVFNTMPRRSTVTYNAMISGYLSNGRFDLAREMFDKM- 114
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
P+ + T +L Y + +
Sbjct: 115 ---PERDLFTWNVMLSG-----------------------------------YVRNKNLT 136
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
+A +F M DV WN+M+ G+A +G + E+ ++F EM + + I++ LL+A
Sbjct: 137 DARGLFER--MPRRDVVSWNAMLSGYAQNGFIAEAREIFDEMPV----KNSISWNGLLAA 190
Query: 255 CAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASM 314
G +++A F+ + M + C++ + ++ +A + +IP++ S
Sbjct: 191 YVQNGRIEDARRLFE----SKMDWDVVSWNCLMGGFVKKKRLVDARRVFDRIPVRDEVS- 245
Query: 315 LGALLNGCMNHGKLDLAETVGRKLIELEPHQD 346
++ G +G+L+ A RKL E P QD
Sbjct: 246 WNTMITGYAQNGELEEA----RKLFEESPTQD 273
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 67/148 (45%), Gaps = 31/148 (20%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R G + +F + A A + +LG HG++ K GY++ +V N+L+ MY
Sbjct: 393 MKRDGESLNRSSFTSVLTACADIAALDLGKQFHGWLVKVGYQTGCYVGNALLAMYCKCGS 452
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I A F I K+L+SWN+M+ GYA R
Sbjct: 453 IDEADDAFHEITDKDLISWNTMIYGYA-------------------------------RH 481
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSV 148
G EAL VFE M+ G KP+E TMV+V
Sbjct: 482 GFGKEALIVFESMKTVGVKPDEATMVTV 509
>29676.m001642 pentatricopeptide repeat-containing protein, putative
Length = 507
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 169/314 (53%), Gaps = 6/314 (1%)
Query: 21 ACLLKR--ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVS 78
+CL R E+G +H +I +G+ +SN L+ MY+ D+ +A+K+F+ + ++L S
Sbjct: 89 SCLKNRALEVGKKVHDHIKLSGFIPGLVISNRLLDMYAKCNDLVDAQKLFEEMGERDLCS 148
Query: 79 WNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM-RVSG 137
WN ++ G AK G + AR++FD MPE+D SW+ +I GYVR EAL ++ M +
Sbjct: 149 WNVLISGCAKMGLLKEARKLFDTMPERDNFSWTAMISGYVRHNRPHEALELYRLMKKCEN 208
Query: 138 PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL 197
N+ T+ SVL A A + L G+ +H Y++ L V+ ++L DMY KCG+I+EA
Sbjct: 209 LTSNKFTVSSVLAAAAAIPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEAR 268
Query: 198 HVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
H+F M DV W +MI + G +E +LF+E+ G+KP++ T+ +L+ACA
Sbjct: 269 HIFDK--MVNRDVVTWTAMIDRYFEDGRREEGFELFAELLRSGIKPNDFTFAGVLNACAD 326
Query: 258 GGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGA 317
G+ + + P S + +V + ++ G + A + +P QP +
Sbjct: 327 LGVEGIGKQVHGHMTRADFDPFSFAASALVHMYSKCGNMVNAERVFRGMP-QPDLVSWTS 385
Query: 318 LLNGCMNHGKLDLA 331
L+ G +G D A
Sbjct: 386 LIAGYAQNGHPDEA 399
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 124/241 (51%), Gaps = 33/241 (13%)
Query: 28 LGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYA 87
+G IHGYI + G +SD V W+++ D Y
Sbjct: 231 IGKEIHGYIMRTGLDSDEVV-------------------------------WSALSDMYG 259
Query: 88 KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
KCG I AR +FD M +DV++W+ +ID Y G +E +F E+ SG KPN+ T
Sbjct: 260 KCGSIEEARHIFDKMVNRDVVTWTAMIDRYFEDGRREEGFELFAELLRSGIKPNDFTFAG 319
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP 207
VL ACA LG G+ +H ++ + ++LV MY+KCG + A VFR G+ +P
Sbjct: 320 VLNACADLGVEGIGKQVHGHMTRADFDPFSFAASALVHMYSKCGNMVNAERVFR-GMPQP 378
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYF 267
D+ W S+I G+A +G E+L F + G +PD IT++ +LSACAH GLV + +
Sbjct: 379 -DLVSWTSLIAGYAQNGHPDEALQYFELLLKSGTRPDHITFVGVLSACAHAGLVDKGLQY 437
Query: 268 F 268
F
Sbjct: 438 F 438
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 89/170 (52%), Gaps = 31/170 (18%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+LR G+ P+ TF + A A L +G +HG++T+A ++ F +++L+HMYS
Sbjct: 305 LLRSGIKPNDFTFAGVLNACADLGVEGIGKQVHGHMTRADFDPFSFAASALVHMYS---- 360
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
KCG++ A +VF MP+ D++SW+ LI GY +
Sbjct: 361 ---------------------------KCGNMVNAERVFRGMPQPDLVSWTSLIAGYAQN 393
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID 170
G DEAL FE + SG +P+ +T V VL ACAH G +DKG H ++D
Sbjct: 394 GHPDEALQYFELLLKSGTRPDHITFVGVLSACAHAGLVDKGLQYFHSIMD 443
>27985.m000891 pentatricopeptide repeat-containing protein, putative
Length = 293
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 124/204 (60%), Gaps = 2/204 (0%)
Query: 51 LIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSW 110
++ Y+S + +AR +F+ +P +N W+SM+ GY K GD+ AR +FD +P +++++W
Sbjct: 76 MVDGYASKGKMADARILFEEMPDRNYFVWSSMISGYCKLGDVKEARCIFDRIPIRNLVNW 135
Query: 111 SCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID 170
+ LI GY + G +EAL FE M+ G +P+E+T+V VL ACA LG LD G+ +H +
Sbjct: 136 NSLICGYAQNGFCEEALEAFENMQADGFEPDEITVVGVLSACAQLGLLDVGKDVHRMAYN 195
Query: 171 NELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESL 230
+ L + +LVDMYAKCG + A +F M + WN+MI GFA HG K++L
Sbjct: 196 KGIKLNQFIMNALVDMYAKCGDLTTARSIFEG--MTYKNNACWNAMISGFAIHGQCKKAL 253
Query: 231 DLFSEMHIVGVKPDEITYLNLLSA 254
+ F M KPD+IT+L L A
Sbjct: 254 EFFRRMEESNEKPDDITFLILARA 277
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 136/277 (49%), Gaps = 11/277 (3%)
Query: 71 IPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVF 130
+P +N+V+WN+M+ GY + D+ A +F+ M + +++W +IDG+ R GD A +F
Sbjct: 1 MPERNVVTWNAMISGYVRNRDMKSALGLFEKMSIRTMVTWIEMIDGFARNGDLVTARCLF 60
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELP-LTLVLRTSLVDMYAK 189
++ V + N VT ++ G KG+M ++ E+P + +S++ Y K
Sbjct: 61 DQ--VPLEQKNVVTWTVMV-----DGYASKGKMADARILFEEMPDRNYFVWSSMISGYCK 113
Query: 190 CGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYL 249
G ++EA +F + ++ WNS+I G+A +G +E+L+ F M G +PDEIT +
Sbjct: 114 LGDVKEARCIFDR--IPIRNLVNWNSLICGYAQNGFCEEALEAFENMQADGFEPDEITVV 171
Query: 250 NLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ 309
+LSACA GL+ G+ +VD+ A+ G + A + +
Sbjct: 172 GVLSACAQLGLLDVGKDVHRMAYNKGIKLNQFIMNALVDMYAKCGDLTTARSIFEGMTYK 231
Query: 310 PTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQD 346
A A+++G HG+ A R++ E D
Sbjct: 232 NNAC-WNAMISGFAIHGQCKKALEFFRRMEESNEKPD 267
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G PD +T + A A L ++G +H G + ++F+ N+L+ MY+ D+ A
Sbjct: 162 GFEPDEITVVGVLSACAQLGLLDVGKDVHRMAYNKGIKLNQFIMNALVDMYAKCGDLTTA 221
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQD 106
R +F+G+ KN WN+M+ G+A G A + F M E +
Sbjct: 222 RSIFEGMTYKNNACWNAMISGFAIHGQCKKALEFFRRMEESN 263
>30131.m006999 pentatricopeptide repeat-containing protein, putative
Length = 454
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 122/191 (63%), Gaps = 3/191 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG-P 138
N++LD YAKCG++ ++RQVFD + E+D +SW+ +I Y + G EA VF M G
Sbjct: 231 NTLLDAYAKCGEVGVSRQVFDEIVEKDAISWNSMIAVYAQNGLSSEAFEVFHGMIKYGYV 290
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
K N VT+ ++L ACAH GAL G+ +H VI L +++ TSL+DMY KCG +Q A
Sbjct: 291 KYNAVTLSTLLLACAHSGALQTGKCIHDQVIRMGLDDNVIVGTSLIDMYCKCGRVQMARK 350
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHG 258
F MK +V W +M+ G+ HG +E+L++F +M GVKP+ IT++++L+AC+H
Sbjct: 351 TFDG--MKEKNVKSWTAMVAGYGMHGCAREALNIFYKMIRSGVKPNYITFVSVLAACSHA 408
Query: 259 GLVKEAWYFFD 269
GL+ E ++ D
Sbjct: 409 GLLDEGYFQLD 419
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 58/87 (66%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
N++ S++D Y KCG + MAR+ FD M E++V SW+ ++ GY G EAL +F +M
Sbjct: 328 NVIVGTSLIDMYCKCGRVQMARKTFDGMKEKNVKSWTAMVAGYGMHGCAREALNIFYKMI 387
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKG 161
SG KPN +T VSVL AC+H G LD+G
Sbjct: 388 RSGVKPNYITFVSVLAACSHAGLLDEG 414
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 137/338 (40%), Gaps = 56/338 (16%)
Query: 103 PEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR 162
+ +V SW+ LI R GD E+L F MR KPN T + AC+ L L G+
Sbjct: 43 EKTNVFSWNSLIADLARSGDSIESLRAFYSMRKLNLKPNRSTFPCAIKACSSLLDLHWGK 102
Query: 163 MMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFAC 222
H + L + ++LVDMY+KCG + +A +F + ++ IW SMI G+
Sbjct: 103 QTHQQALVFGFESDLFVSSALVDMYSKCGRLSDARILFDE--ITHRNIVIWTSMITGYIQ 160
Query: 223 HGLVKESLDLFSEMHIV---------GVKPDEITYLNLLSACA-----------HGGLVK 262
+ E+L LF + I V D + +++LSAC+ HG +VK
Sbjct: 161 NDHAHEALLLFKQFLIEESERNEEKDEVLMDSVAMVSVLSACSRISGKGMTKGVHGFVVK 220
Query: 263 EAW--------YFFDCLGKNGMTPKSEH------------YACMVDVMARAGQVAEAYQF 302
+ D K G S + M+ V A+ G +EA++
Sbjct: 221 KGLDEDVGIENTLLDAYAKCGEVGVSRQVFDEIVEKDAISWNSMIAVYAQNGLSSEAFEV 280
Query: 303 LCQIP----IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLS--NVY 356
+ ++ A L LL C + G L + + ++I + D VG S ++Y
Sbjct: 281 FHGMIKYGYVKYNAVTLSTLLLACAHSGALQTGKCIHDQVIRM-GLDDNVIVGTSLIDMY 339
Query: 357 AIFRRWDKARSMREAMERMGVKK----SPGYSFVEMHG 390
R AR + M+ VK GY MHG
Sbjct: 340 CKCGRVQMARKTFDGMKEKNVKSWTAMVAGYG---MHG 374
>29953.m000441 pentatricopeptide repeat-containing protein, putative
Length = 542
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 150/271 (55%), Gaps = 6/271 (2%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD + + A L ++G IHGY+ K G D+ V ++LI MY +V
Sbjct: 237 PDGTSISSVLSAVGDLKMLDMGFQIHGYVIKQGLCQDKCVVSALIDMYGKCACTMKISEV 296
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDY 123
FD + ++ + N+++ G ++ G + A QVF +Q +V+SW+ +I + G
Sbjct: 297 FDEMYHMDVGACNALVTGLSRNGLVDKALQVFRRFKDQGMELNVVSWTSIIASCSQNGKD 356
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
EAL +F EM+V G KPN VT+ +L AC ++ AL G+ H + + + + + + ++L
Sbjct: 357 IEALELFREMQVVGVKPNAVTIPCLLPACGNIAALMHGKAAHCFSLKSGISSNVYVGSAL 416
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
VDMYAKCG I + F +M ++ WN+++ G+A HG KE++ +F M G KP
Sbjct: 417 VDMYAKCGRIHISRLCF--DIMPTRNLVSWNALMAGYAMHGQTKEAISIFQRMQRSGQKP 474
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCLGKN 274
D ++++++LSAC+ GG E W +F+ + +
Sbjct: 475 DFVSFISVLSACSQGGKTNEGWSYFNSMSND 505
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 185/379 (48%), Gaps = 46/379 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML G D P + KA A L + +H + +G+ SD V +SL+HMY
Sbjct: 94 MLSQGFLLDRHVLPSVIKACAGLSFLKTAKQVHCMASVSGFGSDSRVLSSLVHMYIKCNR 153
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVF----DLMPEQDVLSWSCLIDG 116
+ +A KVFD + ++V+++++L GYA+ G I ++F DL E +++SW+ +I G
Sbjct: 154 LKDAHKVFDKLSQPDVVAYSALLAGYARRGCIGETMELFSKRGDLGVELNLISWNGMIAG 213
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
+ + +A+ +F+ M KP+ ++ SVL A L LD G +H YVI L
Sbjct: 214 FNHSRHHLDAVIIFQNMHCEEFKPDGTSISSVLSAVGDLKMLDMGFQIHGYVIKQGLCQD 273
Query: 177 LVLRTSLVDMYAKCGAIQEALHVF-------------------RSGLMKPS--------- 208
+ ++L+DMY KC + VF R+GL+ +
Sbjct: 274 KCVVSALIDMYGKCACTMKISEVFDEMYHMDVGACNALVTGLSRNGLVDKALQVFRRFKD 333
Query: 209 -----DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV-- 261
+V W S+I + +G E+L+LF EM +VGVKP+ +T LL AC + +
Sbjct: 334 QGMELNVVSWTSIIASCSQNGKDIEALELFREMQVVGVKPNAVTIPCLLPACGNIAALMH 393
Query: 262 KEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASML--GALL 319
+A + F K+G++ + +VD+ A+ G++ + LC I PT +++ AL+
Sbjct: 394 GKAAHCFSL--KSGISSNVYVGSALVDMYAKCGRIHISR--LC-FDIMPTRNLVSWNALM 448
Query: 320 NGCMNHGKLDLAETVGRKL 338
G HG+ A ++ +++
Sbjct: 449 AGYAMHGQTKEAISIFQRM 467
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 36/196 (18%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M VGV P+ +T P L A + G A H + K+G S+ +V ++L+ M
Sbjct: 366 MQVVGVKPNAVTIPCLLPACGNIAALMHGKAAHCFSLKSGISSNVYVGSALVDM------ 419
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
YAKCG I ++R FD+MP ++++SW+ L+ GY
Sbjct: 420 -------------------------YAKCGRIHISRLCFDIMPTRNLVSWNALMAGYAMH 454
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G EA+++F+ M+ SG KP+ V+ +SVL AC+ G ++G + N + VLR
Sbjct: 455 GQTKEAISIFQRMQRSGQKPDFVSFISVLSACSQGGKTNEG-----WSYFNSMSNDYVLR 509
Query: 181 TSLVDMYAKCGAIQEA 196
D + C I+EA
Sbjct: 510 VKCWDASSYCDQIEEA 525
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 97/226 (42%), Gaps = 33/226 (14%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGD 91
++ YI K G + +++ + + +Y + N + + +
Sbjct: 24 VYAYILKCGISTTTYLATNPLPLYENHHSFTNTGRAINSV-------------------- 63
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
PE S+ L + + + + + + +M G + + SV+ A
Sbjct: 64 -----------PESSFQSFYTLFNEFTNHNQFGQVIRLSSQMLSQGFLLDRHVLPSVIKA 112
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVF 211
CA L L + +H + + +SLV MY KC +++A VF L +P DV
Sbjct: 113 CAGLSFLKTAKQVHCMASVSGFGSDSRVLSSLVHMYIKCNRLKDAHKVFDK-LSQP-DVV 170
Query: 212 IWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
+++++ G+A G + E+++LFS+ +GV+ + I++ +++ H
Sbjct: 171 AYSALLAGYARRGCIGETMELFSKRGDLGVELNLISWNGMIAGFNH 216
>29739.m003641 pentatricopeptide repeat-containing protein, putative
Length = 1439
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 141/266 (53%), Gaps = 33/266 (12%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D T AKA L++ E G IH K G SD F+S+ +
Sbjct: 1190 DEYTLATAAKACGSLVRLEQGKQIHALAIKFGLNSDLFLSSGI----------------- 1232
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
LD Y KCG++ +FD +P D ++W+ +I G V GD D AL+
Sbjct: 1233 --------------LDMYIKCGNMEDGHLLFDNIPVPDDVAWTIMISGCVENGDEDRALS 1278
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
V+ +MR+SG P+E T +++ A + L AL++GR +H VI E + TSL+DMYA
Sbjct: 1279 VYRQMRLSGILPDEYTFATLIKASSCLTALEQGRQIHANVIKLECASDPFVGTSLIDMYA 1338
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
KCG I++A +FR M ++ +WN+M+ A HG +E+L LF M +KPD++T+
Sbjct: 1339 KCGIIEDAYCLFRR--MDVRNIVVWNAMLVSLAQHGHGEEALHLFKVMQSHSIKPDKVTF 1396
Query: 249 LNLLSACAHGGLVKEAWYFFDCLGKN 274
+ +LSAC+H G V EA+ F + K+
Sbjct: 1397 IGVLSACSHSGHVSEAYGHFHSMHKD 1422
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 149/327 (45%), Gaps = 35/327 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRE-LGLAIHGYITKAGYESDRFVSNSLIHMYSSFR 59
+LR G+ PDH T + KA + L + L IH Y+TK ++ FVS +LI
Sbjct: 1080 LLRDGLQPDHFTLASVLKACSSLTEGLFLSKQIHVYVTKTSIIAENFVSTALI------- 1132
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
D Y++ G ++ A +F+ + D+ +W+ ++ GY+
Sbjct: 1133 ------------------------DVYSRSGLMAEAEFIFENKNKFDLAAWNAMMFGYII 1168
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
GD+D+ L +F M G +E T+ + AC L L++G+ +H I L L L
Sbjct: 1169 CGDHDKGLKLFAFMHEKGESCDEYTLATAAKACGSLVRLEQGKQIHALAIKFGLNSDLFL 1228
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+ ++DMY KCG +++ H+ + P DV W MI G +G +L ++ +M +
Sbjct: 1229 SSGILDMYIKCGNMEDG-HLLFDNIPVPDDV-AWTIMISGCVENGDEDRALSVYRQMRLS 1286
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
G+ PDE T+ L+ A + +++ + K ++D+ A+ G + +A
Sbjct: 1287 GILPDEYTFATLIKASSCLTALEQGRQIHANVIKLECASDPFVGTSLIDMYAKCGIIEDA 1346
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHG 326
Y ++ ++ + A+L HG
Sbjct: 1347 YCLFRRMDVRNIV-VWNAMLVSLAQHG 1372
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 149/331 (45%), Gaps = 35/331 (10%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D++T + A+ LG IHG K+G++S V+NSLI+MYS
Sbjct: 987 DNVTLVVVLAAATGTGDLMLGKLIHGMTLKSGFDSVVSVANSLINMYS------------ 1034
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
K G +S+A VF M E D++SW+ +I Y + G E++
Sbjct: 1035 -------------------KMGFVSLAHTVFTGMNELDLISWNSMISCYAQNGLQKESVN 1075
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLG-ALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+ + G +P+ T+ SVL AC+ L L + +H YV + + T+L+D+Y
Sbjct: 1076 LLVGLLRDGLQPDHFTLASVLKACSSLTEGLFLSKQIHVYVTKTSIIAENFVSTALIDVY 1135
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
++ G + EA +F + D+ WN+M+ G+ G + L LF+ MH G DE T
Sbjct: 1136 SRSGLMAEAEFIFEN--KNKFDLAAWNAMMFGYIICGDHDKGLKLFAFMHEKGESCDEYT 1193
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
AC +++ K G+ + ++D+ + G + + + IP
Sbjct: 1194 LATAAKACGSLVRLEQGKQIHALAIKFGLNSDLFLSSGILDMYIKCGNMEDGHLLFDNIP 1253
Query: 308 IQPTASMLGALLNGCMNHGKLDLAETVGRKL 338
+ P +++GC+ +G D A +V R++
Sbjct: 1254 V-PDDVAWTIMISGCVENGDEDRALSVYRQM 1283
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 126/301 (41%), Gaps = 82/301 (27%)
Query: 11 LTFPF---------------LAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMY 55
L+FPF L +A+ LG IH I +G SDRF++N+LI MY
Sbjct: 690 LSFPFRFSSLSSPSSSQCFSLLRAAVSTSNLHLGKCIHANIITSGLTSDRFLANNLITMY 749
Query: 56 SSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLID 115
S KCG +S ARQ+FD P++D+++W+ ++
Sbjct: 750 S-------------------------------KCGSVSSARQLFDRTPDRDLVTWNAVLS 778
Query: 116 GYVR--KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL 173
Y R + +YD + F R+ + +V ++L
Sbjct: 779 AYARSDESEYDHVVEGFHIFRL---------------------------LRERFVSTSKL 811
Query: 174 PLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF 233
L +L+ L+ Y C + +A+H + + DVF+ +++ ++ GLV+E+ LF
Sbjct: 812 TLAPMLKLCLLSGYV-CAS--QAVHGYAVKIGLELDVFVSGALVNIYSKFGLVREARGLF 868
Query: 234 SEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARA 293
M + D + + +L A GLVKEA FF ++G+ P C+V ++
Sbjct: 869 DIMQ----ERDVVLWNVMLKAYVEMGLVKEALSFFSQFHQSGLRPDDASMRCVVSGISEV 924
Query: 294 G 294
G
Sbjct: 925 G 925
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 74/152 (48%), Gaps = 31/152 (20%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ PD TF L KAS+CL E G IH + K SD FV SLI MY+ I +A
Sbjct: 1287 GILPDEYTFATLIKASSCLTALEQGRQIHANVIKLECASDPFVGTSLIDMYAKCGIIEDA 1346
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
+F + V+N+V WN+ML +S+A+ G +
Sbjct: 1347 YCLFRRMDVRNIVVWNAML--------VSLAQH-----------------------GHGE 1375
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLG 156
EAL +F+ M+ KP++VT + VL AC+H G
Sbjct: 1376 EALHLFKVMQSHSIKPDKVTFIGVLSACSHSG 1407
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 105/256 (41%), Gaps = 75/256 (29%)
Query: 31 AIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCG 90
A+HGY K G E D FVS +L+++YS F G
Sbjct: 831 AVHGYAVKIGLELDVFVSGALVNIYSKF-------------------------------G 859
Query: 91 DISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLC 150
+ AR +FD+M E+DV+ W+ ++ YV G EAL+ F + SG +P++ +M V+
Sbjct: 860 LVREARGLFDIMQERDVVLWNVMLKAYVEMGLVKEALSFFSQFHQSGLRPDDASMRCVVS 919
Query: 151 ACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM---KP 207
+ +G D GR Y+ E + + + L
Sbjct: 920 GISEVG-YDTGR---RYI--------------------------EQIQAYATKLFFCDDN 949
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG-VKPDEITYLNLLSACAHGGLVKEAWY 266
+DV +WN + + G ++D F M VK D +T + +L+A G +
Sbjct: 950 TDVVMWNKKLSEYLQAGAFWAAVDCFINMLTSSHVKYDNVTLVVVLAAATGTGDL----- 1004
Query: 267 FFDCLGK--NGMTPKS 280
LGK +GMT KS
Sbjct: 1005 ---MLGKLIHGMTLKS 1017
>30146.m003562 pentatricopeptide repeat-containing protein, putative
Length = 472
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 143/265 (53%), Gaps = 34/265 (12%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ PD+ TFPF+ KA + L E G IH + ++G+E D FV +LI MYS
Sbjct: 183 GLVPDNFTFPFVLKACSALSAIEDGRLIHEQVMRSGWERDVFVGAALIDMYS-------- 234
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
KCG + AR+VF P +D + W+ ++ Y + G D
Sbjct: 235 -----------------------KCGCVDNAREVFHKFPVRDAVLWNSMLAAYSQNGKPD 271
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
++LA+ EM ++G +P E T+V+V+ A A + AL +GR +H + ++T+L+
Sbjct: 272 KSLALCSEMVLAGVRPTEATLVTVISASADIAALPQGRELHGFAWRRRFESNDKVKTTLI 331
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
DMYAKCG ++ A ++F ++ +V WN++I G+A HG E L LF M KPD
Sbjct: 332 DMYAKCGTMKVAQNLFEQ--LRDKNVVSWNAIITGYAMHGYSNEVLILFDRMR-EEAKPD 388
Query: 245 EITYLNLLSACAHGGLVKEAWYFFD 269
IT++ +L AC++GGL+ + + +D
Sbjct: 389 HITFVGVLLACSNGGLLDKEFPRYD 413
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 125/245 (51%), Gaps = 3/245 (1%)
Query: 82 MLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN 141
+++ Y C + AR +FD +P++++ W+ LI GY G Y+ ++ ++ ++ G P+
Sbjct: 128 LVNLYCICNSLCEARLLFDKIPKRNLFLWNVLIRGYAWYGPYEASIQLYYKIFDYGLVPD 187
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR 201
T VL AC+ L A++ GR++H V+ + + + +L+DMY+KCG + A VF
Sbjct: 188 NFTFPFVLKACSALSAIEDGRLIHEQVMRSGWERDVFVGAALIDMYSKCGCVDNAREVFH 247
Query: 202 SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
++ D +WNSM+ ++ +G +SL L SEM + GV+P E T + ++SA A +
Sbjct: 248 KFPVR--DAVLWNSMLAAYSQNGKPDKSLALCSEMVLAGVRPTEATLVTVISASADIAAL 305
Query: 262 KEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNG 321
+ + + ++D+ A+ G + A Q+ + S A++ G
Sbjct: 306 PQGRELHGFAWRRRFESNDKVKTTLIDMYAKCGTMKVAQNLFEQLRDKNVVSW-NAIITG 364
Query: 322 CMNHG 326
HG
Sbjct: 365 YAMHG 369
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 32/160 (20%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ GV P T + ASA + G +HG+ + +ES+ V +LI MY+
Sbjct: 280 MVLAGVRPTEATLVTVISASADIAALPQGRELHGFAWRRRFESNDKVKTTLIDMYAKCGT 339
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A+ +F+ + KN+VSWN+++ GYA + GY
Sbjct: 340 MKVAQNLFEQLRDKNVVSWNAIITGYA--------------------------MHGYS-- 371
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK 160
+E L +F+ MR KP+ +T V VL AC++ G LDK
Sbjct: 372 ---NEVLILFDRMREEA-KPDHITFVGVLLACSNGGLLDK 407
>27810.m000670 pentatricopeptide repeat-containing protein, putative
Length = 818
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/270 (35%), Positives = 138/270 (51%), Gaps = 34/270 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
MLR + P+ T + + ELG IH I K Y+S FV +SL
Sbjct: 567 MLRSDIEPNEFTLATVLTSCTDASGSELGRQIHSLIIKCNYDSHIFVGSSL--------- 617
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
LD YAK G I AR VF+ +PE+DV+S + +I GY +
Sbjct: 618 ----------------------LDMYAKAGRILEARMVFESLPERDVVSCTAIISGYAQL 655
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +EAL +F + G N VT SVL + + L ALD G+ +H +V+ ELP +VL+
Sbjct: 656 GLDEEALELFRRLEREGLSSNCVTYASVLTSLSGLAALDHGKQVHSHVLRRELPFYVVLQ 715
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
S++DMY+KCG++ A +F S M V WN+M+ G+ HG+ +E ++LF M
Sbjct: 716 NSMIDMYSKCGSLNYARRIFDS--MPERTVISWNAMLVGYGKHGMGREVVELFKLMRTEN 773
Query: 241 -VKPDEITYLNLLSACAHGGLVKEAWYFFD 269
VKPD +T L +LS C+HGG + FD
Sbjct: 774 KVKPDSVTILAVLSGCSHGGFEDKGLEIFD 803
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 134/267 (50%), Gaps = 32/267 (11%)
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
Y KC + AR VFD M E++V+SW+ +I GY R+G E L +F M S +PNE T+
Sbjct: 520 YTKCDLLMDARHVFDEMSERNVVSWTAMISGYSRRGFAFETLHLFVRMLRSDIEPNEFTL 579
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
+VL +C + GR +H +I + + +SL+DMYAK G I EA VF S +
Sbjct: 580 ATVLTSCTDASGSELGRQIHSLIIKCNYDSHIFVGSSLLDMYAKAGRILEARMVFES--L 637
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA--------- 256
DV ++I G+A GL +E+L+LF + G+ + +TY ++L++ +
Sbjct: 638 PERDVVSCTAIISGYAQLGLDEEALELFRRLEREGLSSNCVTYASVLTSLSGLAALDHGK 697
Query: 257 --HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASM 314
H +++ F+ L + M+D+ ++ G + A + +P + T
Sbjct: 698 QVHSHVLRRELPFYVVLQNS-----------MIDMYSKCGSLNYARRIFDSMP-ERTVIS 745
Query: 315 LGALLNGCMNHGKLDLAETVGRKLIEL 341
A+L G HG +GR+++EL
Sbjct: 746 WNAMLVGYGKHG-------MGREVVEL 765
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 105/236 (44%), Gaps = 12/236 (5%)
Query: 103 PEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR 162
P Q L+ C +G EAL EM G + ++L C + A+ +G+
Sbjct: 445 PNQRTLNSLC------SQGRLQEALF---EMACQGLEMKFDGYNTLLNECVNNKAIREGQ 495
Query: 163 MMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFAC 222
+H ++I ++ LRT L+ Y KC + +A HVF M +V W +MI G++
Sbjct: 496 RVHAHIIKTYYLPSVYLRTRLIVFYTKCDLLMDARHVFDE--MSERNVVSWTAMISGYSR 553
Query: 223 HGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEH 282
G E+L LF M ++P+E T +L++C + + K
Sbjct: 554 RGFAFETLHLFVRMLRSDIEPNEFTLATVLTSCTDASGSELGRQIHSLIIKCNYDSHIFV 613
Query: 283 YACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKL 338
+ ++D+ A+AG++ EA +P + S A+++G G + A + R+L
Sbjct: 614 GSSLLDMYAKAGRILEARMVFESLPERDVVSCT-AIISGYAQLGLDEEALELFRRL 668
>29805.m001533 pentatricopeptide repeat-containing protein, putative
Length = 420
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 147/273 (53%), Gaps = 33/273 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML +G P+H T L KAS G +H + K GY + +V ++L
Sbjct: 173 MLTLGFRPNHFTLSSLLKASGVSPSDSNGRLLHAFCIKYGYSCNVYVGSAL--------- 223
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
LD YA+ G + A +FD +P ++ +SW+ LI G RK
Sbjct: 224 ----------------------LDMYARSGHLEEALFIFDGLPSRNEVSWNALIAGCARK 261
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
GD + A + F +M +P + T VL ACA +G+L++G+ +H +I + L +
Sbjct: 262 GDQELAFSFFSKMLRENIQPTQFTYSIVLSACASIGSLEQGKWVHALLIKSGAKLVDFVG 321
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+ MYAK G+I++A VF GL+K DV WNSM+ G+A HGL +L +F +M I+G
Sbjct: 322 NTLLGMYAKSGSIEDARKVF-DGLVK-RDVVSWNSMLAGYAQHGLGNIALLIFRQMLIIG 379
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK 273
V P++IT+L +L+AC+H GL+ E ++F+ + K
Sbjct: 380 VAPNDITFLCVLTACSHAGLLAEGLHYFNLMRK 412
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 165/315 (52%), Gaps = 7/315 (2%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV----FDGIPVKNLVSWNSMLD 84
GL + I +A E DR + + L + F + + V + +LV N++L+
Sbjct: 65 GLHVLDLIDRASLEPDRTLYHILFKKCTLFNKLKEGQLVHAHLLNSRFKHDLVIQNTILN 124
Query: 85 GYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVT 144
YAKCG++ AR+VFD MP +DV++W+ LI GY + +AL +F +M G +PN T
Sbjct: 125 MYAKCGNLGEARKVFDQMPVKDVVTWTALITGYSQHDRPKDALLLFPQMLTLGFRPNHFT 184
Query: 145 MVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL 204
+ S+L A + GR++H + I + + ++L+DMYA+ G ++EAL +F GL
Sbjct: 185 LSSLLKASGVSPSDSNGRLLHAFCIKYGYSCNVYVGSALLDMYARSGHLEEALFIF-DGL 243
Query: 205 MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEA 264
++V WN++I G A G + + FS+M ++P + TY +LSACA G +++
Sbjct: 244 PSRNEV-SWNALIAGCARKGDQELAFSFFSKMLRENIQPTQFTYSIVLSACASIGSLEQG 302
Query: 265 WYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMN 324
+ L K+G ++ + A++G + +A + + + S ++L G
Sbjct: 303 KWVHALLIKSGAKLVDFVGNTLLGMYAKSGSIEDARKVFDGLVKRDVVSW-NSMLAGYAQ 361
Query: 325 HGKLDLAETVGRKLI 339
HG ++A + R+++
Sbjct: 362 HGLGNIALLIFRQML 376
>30138.m004056 pentatricopeptide repeat-containing protein, putative
Length = 374
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 137/262 (52%), Gaps = 34/262 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G+ D+ TF FL K L LG +H + K G+ES FV N+LIHMY F+D
Sbjct: 123 MQEEGLMADNFTFSFLIKVCGQLGSVLLGKQMHCSVLKYGFESHVFVRNTLIHMYGIFKD 182
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
++RQ+F+ +P ++++W+ +I YV
Sbjct: 183 FE-------------------------------ISRQLFEEIPSPELVAWNTVIGCYVDC 211
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G + EAL +F M +P+E T+V +L AC+ LG LD GR +H + + L + +
Sbjct: 212 GRFKEALDMFSRMLKLHIEPDEATLVVILAACSALGELDIGRWIHSCISNTGLGRFVEIN 271
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIV 239
S++DMYAKCGA++EA F M + WN+MI G A HG E+L LFS+M
Sbjct: 272 NSIIDMYAKCGALEEAYEAFNK--MSQRNTVTWNTMILGLATHGHTNEALVLFSKMLEQK 329
Query: 240 GVKPDEITYLNLLSACAHGGLV 261
++PD +T+L +L AC+HGG+
Sbjct: 330 LMEPDSVTFLGVLCACSHGGMT 351
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 120/249 (48%), Gaps = 6/249 (2%)
Query: 98 VFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGA 157
VF+ + D W+ +I G+ + + A ++ M+ G + T ++ C LG+
Sbjct: 88 VFENIECPDEFLWNTMIRGFGKSNEPQRAFEYYKRMQEEGLMADNFTFSFLIKVCGQLGS 147
Query: 158 LDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMI 217
+ G+ MH V+ + +R +L+ MY + + +F + ++ WN++I
Sbjct: 148 VLLGKQMHCSVLKYGFESHVFVRNTLIHMYGIFKDFEISRQLFEE--IPSPELVAWNTVI 205
Query: 218 GGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMT 277
G + G KE+LD+FS M + ++PDE T + +L+AC+ G + + C+ G+
Sbjct: 206 GCYVDCGRFKEALDMFSRMLKLHIEPDEATLVVILAACSALGELDIGRWIHSCISNTGLG 265
Query: 278 PKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRK 337
E ++D+ A+ G + EAY+ ++ + T + ++ G HG + A + K
Sbjct: 266 RFVEINNSIIDMYAKCGALEEAYEAFNKMSQRNTVTW-NTMILGLATHGHTNEALVLFSK 324
Query: 338 LIE---LEP 343
++E +EP
Sbjct: 325 MLEQKLMEP 333
>29765.m000741 pentatricopeptide repeat-containing protein, putative
Length = 557
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/256 (37%), Positives = 132/256 (51%), Gaps = 33/256 (12%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P +T + +A A L G IH Y K+G+ SD + N+L
Sbjct: 324 PTEVTLATVLRACAELTDVSRGRCIHCYTIKSGFISDLMLGNTL---------------- 367
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
L YAKCG +S A + F M +D +S+S +I G ++ G+ EAL
Sbjct: 368 ---------------LSTYAKCGTVSDAIRYFHEMELKDEVSYSAIISGCMQNGNAKEAL 412
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
++F MR+SG P TMV +L ACAHL AL G H Y + + + +L+DMY
Sbjct: 413 SMFHRMRLSGMDPELATMVGILPACAHLAALQHGSCCHSYALIKGFTSEITICNALIDMY 472
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
AKCG I A +VF M D+ WN+MI + HGL E+L LF M G++PD++T
Sbjct: 473 AKCGRIDTARNVFDR--MHKRDIVSWNAMIIAYGNHGLGMEALLLFDNMLADGLEPDDVT 530
Query: 248 YLNLLSACAHGGLVKE 263
++ LLSAC+H GLVKE
Sbjct: 531 FICLLSACSHSGLVKE 546
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 159/332 (47%), Gaps = 38/332 (11%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML +G+ P T+PF+ KA + L E G IH + + +SD +VS +++ MY
Sbjct: 109 MLELGIQPSKYTYPFVLKACSALQAIEEGKEIHIHAKRLDLDSDVYVSTAVVDMY----- 163
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGY-VR 119
AKCG + A VF MP +DV++W+ +I G+ +
Sbjct: 164 --------------------------AKCGCLDDAEMVFSGMPYRDVVAWNSMIAGFSLH 197
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
+ Y+E + + +M+ +PN T+V+VL A A AL G+ +H + + +V+
Sbjct: 198 RVCYNETIQLLAQMQKDLVRPNSSTIVAVLPAVAQANALSHGKALHGFCVRRGYIDDVVV 257
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
T L+DMY KC I A + F + ++V W++M+G + L++E+LDLF M +
Sbjct: 258 ATGLLDMYGKCQCIIYARNFFDMMSIVRNEV-TWSAMLGAYVMCELMREALDLFQYMMRI 316
Query: 240 ---GVK-PDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQ 295
VK P E+T +L ACA V K+G ++ A+ G
Sbjct: 317 KDAAVKSPTEVTLATVLRACAELTDVSRGRCIHCYTIKSGFISDLMLGNTLLSTYAKCGT 376
Query: 296 VAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
V++A ++ ++ ++ S A+++GCM +G
Sbjct: 377 VSDAIRYFHEMELKDEVS-YSAIISGCMQNGN 407
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 100/177 (56%), Gaps = 5/177 (2%)
Query: 86 YAKCGDISMARQVFDLMPEQ--DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEV 143
Y C + AR +FD P++ V+ W+ LI Y G + EA+ ++ +M G +P++
Sbjct: 60 YLVCNEDQYARHLFDKSPQRPRKVVIWNMLIRAYAWNGPFTEAINLYYKMLELGIQPSKY 119
Query: 144 TMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSG 203
T VL AC+ L A+++G+ +H + +L + + T++VDMYAKCG + +A VF SG
Sbjct: 120 TYPFVLKACSALQAIEEGKEIHIHAKRLDLDSDVYVSTAVVDMYAKCGCLDDAEMVF-SG 178
Query: 204 LMKPSDVFIWNSMIGGFACHGLV-KESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
M DV WNSMI GF+ H + E++ L ++M V+P+ T + +L A A
Sbjct: 179 -MPYRDVVAWNSMIAGFSLHRVCYNETIQLLAQMQKDLVRPNSSTIVAVLPAVAQAN 234
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 31/152 (20%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ P+ T + A A L + G H Y G+ S+ + N+LI MY+ I A
Sbjct: 422 GMDPELATMVGILPACAHLAALQHGSCCHSYALIKGFTSEITICNALIDMYAKCGRIDTA 481
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
R VFD + +++VSWN+M+ Y G + M
Sbjct: 482 RNVFDRMHKRDIVSWNAMIIAYGNHG-LGM------------------------------ 510
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLG 156
EAL +F+ M G +P++VT + +L AC+H G
Sbjct: 511 EALLLFDNMLADGLEPDDVTFICLLSACSHSG 542
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 7/118 (5%)
Query: 152 CAHLGALDKGRMMH------HYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
C L +G+++H H +N+ LV+ L+ +Y C Q A H+F
Sbjct: 20 CIQSKWLSQGKLIHQNLLKHHIAKNNDTHFRLVIE-KLMHLYLVCNEDQYARHLFDKSPQ 78
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKE 263
+P V IWN +I +A +G E+++L+ +M +G++P + TY +L AC+ ++E
Sbjct: 79 RPRKVVIWNMLIRAYAWNGPFTEAINLYYKMLELGIQPSKYTYPFVLKACSALQAIEE 136
>30156.m001722 pentatricopeptide repeat-containing protein, putative
Length = 462
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 164/342 (47%), Gaps = 42/342 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G D T+PF+ KA L E G +H + G+ D +V NSL+ MYS F
Sbjct: 134 MSSFGQKADKFTYPFVIKACGDLRDVEFGWRVHCEVVITGFNLDIYVGNSLLAMYSKF-- 191
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
G++ MAR VFD MP +D+ SW+ +I GY++
Sbjct: 192 -----------------------------GNMKMARMVFDRMPVRDLTSWNTMISGYLKN 222
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL-TLVL 179
G E LA+F M+ G +++T++ +LC CA L A +G+ +H YV+ N + L
Sbjct: 223 GKPREVLAIFNLMKQIGLSVDDMTLIGLLCTCAELFAEKQGKEIHGYVVRNRHSVFNHFL 282
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
SL++MY KC ++ +A +F M D WNSMI G+A + ESL +F M +
Sbjct: 283 INSLIEMYCKCNSMVDARKLFEH--MAWKDTVSWNSMISGYARNRDAFESLRVFCRMVLE 340
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
G KPD+IT++ +L AC ++ L K G + ++D+ A+ G +A A
Sbjct: 341 GTKPDKITFITVLGACEQITAMEFGRSVHSYLSKKGFSATIFVATALIDMYAKCGNLACA 400
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIEL 341
+ ++P + A+++G HG +GR+ I L
Sbjct: 401 HLVFEEMP-EKNLFCWSAMISGYGIHG-------MGREAISL 434
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 126/245 (51%), Gaps = 32/245 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M ++G+ D +T L A L + G IHGY+ +
Sbjct: 235 MKQIGLSVDDMTLIGLLCTCAELFAEKQGKEIHGYVVR---------------------- 272
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
N VF+ + NS+++ Y KC + AR++F+ M +D +SW+ +I GY R
Sbjct: 273 --NRHSVFNHFLI------NSLIEMYCKCNSMVDARKLFEHMAWKDTVSWNSMISGYARN 324
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
D E+L VF M + G KP+++T ++VL AC + A++ GR +H Y+ T+ +
Sbjct: 325 RDAFESLRVFCRMVLEGTKPDKITFITVLGACEQITAMEFGRSVHSYLSKKGFSATIFVA 384
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T+L+DMYAKCG + A VF M ++F W++MI G+ HG+ +E++ LF EM
Sbjct: 385 TALIDMYAKCGNLACAHLVFEE--MPEKNLFCWSAMISGYGIHGMGREAISLFHEMIKNH 442
Query: 241 VKPDE 245
+ PDE
Sbjct: 443 IIPDE 447
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 93/171 (54%), Gaps = 2/171 (1%)
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
YA CG ++ A+ +FD + ++ W+ +I GY G +AL ++++M G K ++ T
Sbjct: 87 YASCGLMAAAQIIFDGIVLKNSFLWNFMIRGYACNGFPVKALFLYQDMSSFGQKADKFTY 146
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
V+ AC L ++ G +H V+ L + + SL+ MY+K G ++ A VF M
Sbjct: 147 PFVIKACGDLRDVEFGWRVHCEVVITGFNLDIYVGNSLLAMYSKFGNMKMARMVFDR--M 204
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
D+ WN+MI G+ +G +E L +F+ M +G+ D++T + LL CA
Sbjct: 205 PVRDLTSWNTMISGYLKNGKPREVLAIFNLMKQIGLSVDDMTLIGLLCTCA 255
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
Query: 147 SVLCACAHLGALDKGRMMHHYVIDN-ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
+VL + + KG+ +H Y+I + L L T L YA CG + A +F ++
Sbjct: 46 TVLQTLTSIKSFTKGQQLHAYIITSGNLQNNTYLSTKLAAFYASCGLMAAAQIIFDGIVL 105
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
K S F+WN MI G+AC+G ++L L+ +M G K D+ TY ++ AC V+ W
Sbjct: 106 KNS--FLWNFMIRGYACNGFPVKALFLYQDMSSFGQKADKFTYPFVIKACGDLRDVEFGW 163
>30147.m013888 pentatricopeptide repeat-containing protein, putative
Length = 428
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 150/297 (50%), Gaps = 34/297 (11%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD T L +G +HG K G+ + +V ++L+ MYS F
Sbjct: 110 PDGFTLVGLISGLMDFSLLRIGQGVHGLCLKTGFNCNAYVGSALVSMYSRF--------- 160
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
KC I+ A VF + + D+++WS LI GY + GDY++AL
Sbjct: 161 --------------------KC--INSAYNVFSSLCQPDLVAWSALITGYSQSGDYNKAL 198
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+ G K + V + SVL A A L L G +H YV+ + +++ ++L+DMY
Sbjct: 199 VFCTNLCGEGKKADPVLIASVLVAAARLADLGHGTEIHGYVLRHGFESDIMVSSALIDMY 258
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
KCG + + VF + ++ ++ +NS+I G HGL ++ +LF EM G+KPDE T
Sbjct: 259 MKCGLVGWGIRVFDN--IRNQNIISYNSVILGLGLHGLAAQAFELFEEMLEKGLKPDEST 316
Query: 248 YLNLLSACAHGGLVKEAWYFF-DCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
+ LL AC H GLVK+ W + + + + P++EHY +V ++ AG++ +AY F+
Sbjct: 317 FSTLLCACCHAGLVKDGWRIYKQMMDEFCIPPRTEHYVHIVKLLGMAGELEKAYDFI 373
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 111/256 (43%), Gaps = 32/256 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML G+ PD+ T L +A + +HG + +G D ++L+ YS
Sbjct: 1 MLVTGIKPDNYTHACLIRACHENFDLDGLRVLHGGVIVSGLGIDSVSCSALVTAYSKMNY 60
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A KVF GI ++V WNSM+ GY+ CG + ++F+ M E RK
Sbjct: 61 VREASKVFKGIFEPDMVLWNSMISGYSYCGFWNKGLELFNQMREN-------------RK 107
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+P+ T+V ++ L G+ +H + +
Sbjct: 108 -----------------QQPDGFTLVGLISGLMDFSLLRIGQGVHGLCLKTGFNCNAYVG 150
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
++LV MY++ I A +VF S L +P D+ W+++I G++ G ++L + + G
Sbjct: 151 SALVSMYSRFKCINSAYNVFSS-LCQP-DLVAWSALITGYSQSGDYNKALVFCTNLCGEG 208
Query: 241 VKPDEITYLNLLSACA 256
K D + ++L A A
Sbjct: 209 KKADPVLIASVLVAAA 224
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 4/200 (2%)
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
M V+G KP+ T ++ AC LD R++H VI + L + V ++LV Y+K
Sbjct: 1 MLVTGIKPDNYTHACLIRACHENFDLDGLRVLHGGVIVSGLGIDSVSCSALVTAYSKMNY 60
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIVGVKPDEITYLNL 251
++EA VF+ G+ +P D+ +WNSMI G++ G + L+LF++M +PD T + L
Sbjct: 61 VREASKVFK-GIFEP-DMVLWNSMISGYSYCGFWNKGLELFNQMRENRKQQPDGFTLVGL 118
Query: 252 LSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPT 311
+S L++ K G + + +V + +R + AY + QP
Sbjct: 119 ISGLMDFSLLRIGQGVHGLCLKTGFNCNAYVGSALVSMYSRFKCINSAYNVFSSL-CQPD 177
Query: 312 ASMLGALLNGCMNHGKLDLA 331
AL+ G G + A
Sbjct: 178 LVAWSALITGYSQSGDYNKA 197
>29769.m000453 pentatricopeptide repeat-containing protein, putative
Length = 446
Score = 157 bits (397), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 147/299 (49%), Gaps = 39/299 (13%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGY-ESDRFVSNSLIHMYSSFRDIPN 63
G P T + A LL G IHG I Y + F+ N+L MY+ ++I
Sbjct: 151 GFKPTEYTHVSVLNACTQLLDLRKGKQIHGRILTGNYLGGNVFIWNALTDMYAKCKEIDQ 210
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGD-------------------------------- 91
AR +FD + KN+VSWNSM+ GY K G
Sbjct: 211 ARWLFDRLANKNMVSWNSMISGYLKNGQFEIGINLFHEMQGLGLKPDQVTVSNVLCAYFQ 270
Query: 92 ---ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
I A ++F E+D + W+ +I GY + G + AL +F EM + +P+ T+ SV
Sbjct: 271 SGYIDGATKLFSETREKDKVCWTTMIVGYTQNGKEENALMLFNEM-LENVRPDSYTISSV 329
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
+ +CA L +L G+++H + + L++ TSLVDMY KCG +A VF +M
Sbjct: 330 VSSCAKLASLIHGQVIHGIALLMGIDDDLLVSTSLVDMYCKCGVTSDAWVVF--SMMPAR 387
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYF 267
V WN+M+GG+A +G E+L L+ +M ++PD IT++ +LSAC H GL E F
Sbjct: 388 SVVSWNAMLGGYARNGQDLEALALYEKMFQENIRPDNITFVGVLSACNHAGLFDEEAEF 446
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 130/227 (57%), Gaps = 3/227 (1%)
Query: 43 SDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLM 102
SD F+ N L+H+Y+ I +AR +FD + +++ SWN+ML YAK G + R VFD M
Sbjct: 57 SDSFLQNRLLHLYAKLGKISHARYLFDKMSYRDIFSWNAMLSLYAKAGLVEDLRVVFDDM 116
Query: 103 PEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR 162
P +D +S++ +I G+ + G +A+ F M+ G KP E T VSVL AC L L KG+
Sbjct: 117 PSRDSVSYNTVITGFAKNGRAGKAVEAFVRMQTEGFKPTEYTHVSVLNACTQLLDLRKGK 176
Query: 163 MMHHYVID-NELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA 221
+H ++ N L + + +L DMYAKC I +A +F + ++ WNSMI G+
Sbjct: 177 QIHGRILTGNYLGGNVFIWNALTDMYAKCKEIDQARWLFDR--LANKNMVSWNSMISGYL 234
Query: 222 CHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFF 268
+G + ++LF EM +G+KPD++T N+L A G + A F
Sbjct: 235 KNGQFEIGINLFHEMQGLGLKPDQVTVSNVLCAYFQSGYIDGATKLF 281
>29646.m001096 pentatricopeptide repeat-containing protein, putative
Length = 792
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 166/326 (50%), Gaps = 12/326 (3%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML+ G P+ +F + +S+ L ++L H I + GY+++ +V +SLI Y
Sbjct: 407 MLQCGYQPNEFSFSAVLISSSILELQQL----HCLIIRMGYDNNDYVLSSLITSYGRNGL 462
Query: 61 IPNARKVFDG--IPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
I +A P+ + S N++ Y K G ++ + E D +SW+ I
Sbjct: 463 ISDALVFLAASETPLAAVPS-NNVAGIYNKAGHYYKTLELLSQLEEPDNVSWNIAIAACA 521
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL--T 176
R G+Y E +F++M V+ P+ T VS+L + + + L G +H ++I N T
Sbjct: 522 RNGNYKEVFELFKQMLVAQIHPDNYTYVSLLSSSSQICDLALGSSIHGFLIKNNFSSCDT 581
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
V L+DMY KCG ++ ++ +F S M+ ++ W ++I + E+L+ F +M
Sbjct: 582 FVCNV-LLDMYGKCGCLRSSVKIFNS--MRDRNLITWTALISALGINSCAHEALERFKDM 638
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQV 296
G++PD++ ++ +L+AC HG LV E F + G+ P+ +HY C+VD+ +R G V
Sbjct: 639 EHQGLRPDKVAFIAVLTACRHGALVGEGIELFKKMKSYGLEPEMDHYHCLVDLFSRHGHV 698
Query: 297 AEAYQFLCQIPIQPTASMLGALLNGC 322
EA + + +P P A + L GC
Sbjct: 699 KEAEKVISSMPCPPNALIWRTFLEGC 724
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 151/326 (46%), Gaps = 43/326 (13%)
Query: 79 WNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP 138
+N+++ Y ++S+AR+VFD MP++ + S++ +I Y + G +EAL VF MR G
Sbjct: 51 FNNIISLYTSFSELSLARKVFDNMPQRSIASYNSIITSYCKYGYLEEALGVFSRMRDCGF 110
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL-PLTLVLRTSLVDMYAKCGAIQEAL 197
+PN T+ +L +C+ + L G + + N L + + T+L++++ + G + EAL
Sbjct: 111 RPNNFTLSGLL-SCSKMD-LSIGLQLQALAMKNGLFYIDAFVGTALLNVFGRWGWLNEAL 168
Query: 198 HVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI-VGVKPDEITYLNLLSACA 256
HVF +K + WNS+I F HG V++ + F E+H +G E +++ +LS
Sbjct: 169 HVFEDLPIK--SLVTWNSIICLFGQHGYVEDCIIYFCELHREIGCCLSECSFVGVLSGLV 226
Query: 257 HGGLVKEAWYFFDCLGKNGM-----------------------TPKSEHYAC-------- 285
G ++ + K G K E AC
Sbjct: 227 CGKYLEFGEQIHSLVTKTGFDYTVSVVNSVISVYVKCATLHLAEKKFEEAACKDIVTWNT 286
Query: 286 MVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELE 342
M+ +A++ + +A + ++P I+P +L++ C N AE + K+I +
Sbjct: 287 MIVALAKSEKPIKALELFFKMPRDAIRPNQITFASLISSCANLQIPMYAEFIHAKVI-MH 345
Query: 343 PHQDGRYVG--LSNVYAIFRRWDKAR 366
YVG L + YA + D AR
Sbjct: 346 AFDTDVYVGSALVDYYAKCDKLDDAR 371
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 123/258 (47%), Gaps = 14/258 (5%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R + P+ +TF L + A L IH + +++D +V ++L+ Y+
Sbjct: 307 MPRDAIRPNQITFASLISSCANLQIPMYAEFIHAKVIMHAFDTDVYVGSALVDYYAKCDK 366
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYA-KC--GDISMARQVFDLMPEQDVLSWSC-LIDG 116
+ +AR F I KN+VSWNS++ G A KC IS+ ++ + + S+S LI
Sbjct: 367 LDDARCCFVKIHEKNVVSWNSLILGCANKCPYAAISLLVEMLQCGYQPNEFSFSAVLISS 426
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
+ + L + R+ G N+ + S++ + G + + ++ +E PL
Sbjct: 427 SILELQQLHCLII----RM-GYDNNDYVLSSLITSYGRNGLISDALV---FLAASETPLA 478
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
V ++ +Y K G + L + S L +P +V WN I A +G KE +LF +M
Sbjct: 479 AVPSNNVAGIYNKAGHYYKTLELL-SQLEEPDNV-SWNIAIAACARNGNYKEVFELFKQM 536
Query: 237 HIVGVKPDEITYLNLLSA 254
+ + PD TY++LLS+
Sbjct: 537 LVAQIHPDNYTYVSLLSS 554
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 84/165 (50%), Gaps = 3/165 (1%)
Query: 88 KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
KC + +A + F+ +D+++W+ +I + +AL +F +M +PN++T S
Sbjct: 262 KCATLHLAEKKFEEAACKDIVTWNTMIVALAKSEKPIKALELFFKMPRDAIRPNQITFAS 321
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP 207
++ +CA+L +H VI + + + ++LVD YAKC + +A F +
Sbjct: 322 LISSCANLQIPMYAEFIHAKVIMHAFDTDVYVGSALVDYYAKCDKLDDARCCFVK--IHE 379
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
+V WNS+I G A + ++ L EM G +P+E ++ +L
Sbjct: 380 KNVVSWNSLILGCA-NKCPYAAISLLVEMLQCGYQPNEFSFSAVL 423
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 114/258 (44%), Gaps = 35/258 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAG-YESDRFVSNSLIHMYSSFR 59
M G P++ T L S + +GL + K G + D FV +L++++ +
Sbjct: 105 MRDCGFRPNNFTLSGLLSCSK--MDLSIGLQLQALAMKNGLFYIDAFVGTALLNVFGRWG 162
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
+ A VF+ +P+K+LV+WNS++ + + G + +D + + C
Sbjct: 163 WLNEALHVFEDLPIKSLVTWNSIICLFGQHGYV------------EDCIIYFC------- 203
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
E R G +E + V VL L+ G +H V T+ +
Sbjct: 204 -----------ELHREIGCCLSECSFVGVLSGLVCGKYLEFGEQIHSLVTKTGFDYTVSV 252
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
S++ +Y KC + A F K D+ WN+MI A ++L+LF +M
Sbjct: 253 VNSVISVYVKCATLHLAEKKFEEAACK--DIVTWNTMIVALAKSEKPIKALELFFKMPRD 310
Query: 240 GVKPDEITYLNLLSACAH 257
++P++IT+ +L+S+CA+
Sbjct: 311 AIRPNQITFASLISSCAN 328
>27996.m000150 pentatricopeptide repeat-containing protein, putative
Length = 617
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 165/352 (46%), Gaps = 38/352 (10%)
Query: 24 LKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSML 83
L+ LG HG K G+ESD + NSL+ MY+ D+ +A +VF +P ++VSWN M+
Sbjct: 264 LRNALGKLAHGLAIKLGFESDLHLCNSLLDMYAKDGDMDSAEEVFANLPEMSVVSWNVMI 323
Query: 84 DGYA-KC----------------------------------GDISMARQVFDLMPEQDVL 108
GY KC GDI + RQ+FD M V
Sbjct: 324 AGYGQKCKSGKAIEYLQRMQSCGFEPDEVTYINMLTACVRSGDIEIGRQIFDCMACPGVS 383
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
SW+ ++ GY + +++EA+ +F EM+ KP+ T+ +L +CA + L+ G+ +H
Sbjct: 384 SWNGMLSGYFQIENHNEAIKLFREMQFQNVKPDRTTLAIILSSCAGMELLEAGKQVHAIS 443
Query: 169 IDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKE 228
+ + + L+ MY+KCG + A +F+ + D WNSMI G + + L E
Sbjct: 444 QKAAFHEDIYVASGLIGMYSKCGKMDIADCIFKK--ISKQDTVCWNSMIAGLSLNSLDNE 501
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVD 288
+L F +M G+ P + +Y +LS CA + + K G + +VD
Sbjct: 502 ALAFFQQMRQSGMSPTQFSYATILSCCAKLSSLIHGKQIHAQIAKEGFVNDVYVGSALVD 561
Query: 289 VMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
+ + G+V EA QF + + T + +++G +G A + R +IE
Sbjct: 562 MYCKCGEVGEARQFFDIMSSKNTVT-WNEMIHGYAQNGHGHEAVCLYRDMIE 612
Score = 137 bits (345), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 153/290 (52%), Gaps = 13/290 (4%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G +H I + G +D F+ N LI Y +++ A +F +P KN+ SWN++L Y K
Sbjct: 25 GKLLHARIFRIGLSTDTFLLNRLIEFYFKCKNMGYAHNLFHQMPHKNIYSWNAILTEYCK 84
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
G++ A ++F MPE++++SW+ LI VR +AL V+ EM G P T+ S+
Sbjct: 85 AGNLQNAHRLFSEMPERNIVSWNNLISALVRGRLEQQALDVYNEMIWEGLMPTHFTLASI 144
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
L AC L ++ GR H ++ L + + +L+ +Y+KCG +++A+ +F + +P+
Sbjct: 145 LSACGTLLNMESGRKCHTLIVKIGLDNNVYVSNALLSVYSKCGLVRDAVRLFEE-MQEPN 203
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW--- 265
+V + +M+ GF V E+L++F M G+ D ++ ++L C GG +
Sbjct: 204 EV-TYTAMMSGFTQTDRVVEALEMFRLMCRQGICIDSVSLSSVLGVCTKGGCGESDQSDG 262
Query: 266 YFFDCLGK--NGMTPK----SEHYAC--MVDVMARAGQVAEAYQFLCQIP 307
+ LGK +G+ K S+ + C ++D+ A+ G + A + +P
Sbjct: 263 SLRNALGKLAHGLAIKLGFESDLHLCNSLLDMYAKDGDMDSAEEVFANLP 312
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 129/282 (45%), Gaps = 30/282 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G+ P H T + A LL E G H I K G +++ +VSN+L+ +YS
Sbjct: 129 MIWEGLMPTHFTLASILSACGTLLNMESGRKCHTLIVKIGLDNNVYVSNALLSVYSKCGL 188
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDG 116
+ +A ++F+ + N V++ +M+ G+ + + A ++F LM Q D +S S ++ G
Sbjct: 189 VRDAVRLFEEMQEPNEVTYTAMMSGFTQTDRVVEALEMFRLMCRQGICIDSVSLSSVL-G 247
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
KG E + G N + G++ H I
Sbjct: 248 VCTKG------GCGESDQSDGSLRNAL-----------------GKLAHGLAIKLGFESD 284
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
L L SL+DMYAK G + A VF + + V WN MI G+ ++++ M
Sbjct: 285 LHLCNSLLDMYAKDGDMDSAEEVFAN--LPEMSVVSWNVMIAGYGQKCKSGKAIEYLQRM 342
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTP 278
G +PDE+TY+N+L+AC G ++ FDC+ G++
Sbjct: 343 QSCGFEPDEVTYINMLTACVRSGDIEIGRQIFDCMACPGVSS 384
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + G+ P ++ + A L G IH I K G+ +D +V ++L+ MY +
Sbjct: 509 MRQSGMSPTQFSYATILSCCAKLSSLIHGKQIHAQIAKEGFVNDVYVGSALVDMYCKCGE 568
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCG 90
+ AR+ FD + KN V+WN M+ GYA+ G
Sbjct: 569 VGEARQFFDIMSSKNTVTWNEMIHGYAQNG 598
>30129.m000359 pentatricopeptide repeat-containing protein, putative
Length = 242
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 115/185 (62%), Gaps = 12/185 (6%)
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
MPE+DV+SW+ LI GY +Y +AL FE+M+ +G PN VTMV+VL ACA GA++ G
Sbjct: 1 MPERDVVSWTVLIMGYRNAENYGDALIAFEQMQYAGIVPNHVTMVNVLGACARFGAIEMG 60
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA 221
+H ++ + + ++L TSL+DMYAKCG I E+L VFRS MK ++F WN++I G A
Sbjct: 61 IWIHDFIRRSGWEIDVILGTSLIDMYAKCGKINESLSVFRS--MKEKNIFAWNAVIKGLA 118
Query: 222 CHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN--GMTPK 279
+E++ F M G KPDE+T++N+LS C+H G V LGK G T
Sbjct: 119 FAKCGQEAVRWFFTMEQEGFKPDEVTFVNVLSTCSHSGFVD--------LGKQLFGKTTL 170
Query: 280 SEHYA 284
+ YA
Sbjct: 171 QKEYA 175
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 35/166 (21%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G+ P+H+T + A A E+G+ IH +I ++G+E D + SLI MY+
Sbjct: 32 MQYAGIVPNHVTMVNVLGACARFGAIEMGIWIHDFIRRSGWEIDVILGTSLIDMYAKCGK 91
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDG--YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
I + VF + KN+ +WN+++ G +AKCG Q+ + W
Sbjct: 92 INESLSVFRSMKEKNIFAWNAVIKGLAFAKCG--------------QEAVRW-------- 129
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMM 164
F M G KP+EVT V+VL C+H G +D G+ +
Sbjct: 130 -----------FFTMEQEGFKPDEVTFVNVLSTCSHSGFVDLGKQL 164
>30162.m001294 pentatricopeptide repeat-containing protein, putative
Length = 436
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 147/274 (53%), Gaps = 40/274 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLK-RELGLAIHGYITKAGYESDRFVSNSLIHMYSSFR 59
MLR GV P+ T+ + +A + R+L HG I K+G +SD +V ++LI
Sbjct: 149 MLREGVKPNVYTYSSILRACDGVYNLRQL----HGNIIKSGLDSDVYVRSALI------- 197
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
D Y+K G+ A VF+ M D++ W+ +I G+ +
Sbjct: 198 ------------------------DIYSKWGESENALYVFNEMVTGDLIVWNSIIAGFAQ 233
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
D DEAL +F+ M+ +G N+ + SVL AC L L+ GR +H +V ++ L VL
Sbjct: 234 NNDGDEALNLFKSMKRNGFPANQSALTSVLRACTGLALLELGRQVHVHVFKHDQDL--VL 291
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+L+DMY KCG++++A +VF M DV W++MI GFA +G +E+L LF M +
Sbjct: 292 NNALLDMYCKCGSLEDANYVFTR--MVEKDVISWSTMIAGFAQNGYSREALKLFESMKVS 349
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK 273
G KP+ IT L +L AC+H GL++ W++F + K
Sbjct: 350 GTKPNYITILGVLFACSHAGLLEAGWHYFRSMKK 383
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 128/265 (48%), Gaps = 42/265 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKR---ELGLAIHGYITKAGYESDRFVSNSLIHMYSS 57
M + G++ D T+ L K C L R E G ++ +++ GY+ + F+ N L++MY
Sbjct: 48 MHKHGIWADSFTYSELIK---CCLARNAIEQGKQVYKHLSSNGYQPNIFLINMLLNMYVK 104
Query: 58 FRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGY 117
F ++LD A +FD MPE++V+SW+ +I +
Sbjct: 105 F----------------------NLLDE---------ALTLFDQMPERNVVSWTTMISAF 133
Query: 118 VRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
D+AL M G KPN T S+L AC + L R +H +I + L +
Sbjct: 134 SNAKLNDKALEFLICMLREGVKPNVYTYSSILRACDGVYNL---RQLHGNIIKSGLDSDV 190
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
+R++L+D+Y+K G + AL+VF M D+ +WNS+I GFA + E+L+LF M
Sbjct: 191 YVRSALIDIYSKWGESENALYVFNE--MVTGDLIVWNSIIAGFAQNNDGDEALNLFKSMK 248
Query: 238 IVGVKPDEITYLNLLSACAHGGLVK 262
G ++ ++L AC L++
Sbjct: 249 RNGFPANQSALTSVLRACTGLALLE 273
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 10/149 (6%)
Query: 122 DYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRT 181
D A+ + M G + T ++ C A+++G+ ++ ++ N + L
Sbjct: 37 DLPRAMKAMDAMHKHGIWADSFTYSELIKCCLARNAIEQGKQVYKHLSSNGYQPNIFLIN 96
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV 241
L++MY K + EAL +F M +V W +MI F+ L ++L+ M GV
Sbjct: 97 MLLNMYVKFNLLDEALTLFDQ--MPERNVVSWTTMISAFSNAKLNDKALEFLICMLREGV 154
Query: 242 KPDEITYLNLLSAC--------AHGGLVK 262
KP+ TY ++L AC HG ++K
Sbjct: 155 KPNVYTYSSILRACDGVYNLRQLHGNIIK 183
>30138.m004037 pentatricopeptide repeat-containing protein, putative
Length = 399
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 142/250 (56%), Gaps = 6/250 (2%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGY-ITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
V P TF + KA + LG +H I G+ SD FVSN+LI MY +
Sbjct: 136 VGPVSFTFSAIFKACGAVGDLHLGRQMHAQSILIGGFCSDLFVSNTLIDMYIKCGVLECG 195
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
RKVF+ +P K+++SW M+ YAK GD+ A +FD +P +D+++W+ ++ G+ +
Sbjct: 196 RKVFNAMPEKDVISWTEMIVAYAKSGDMDSAHVLFDGLPVKDMVAWTAMVTGFSQNAKPR 255
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG---RMMHHYVIDNELPLTLVLRT 181
EA+ FE M+ +G +EVT+V V+ AC+ LGA + R + + ++VL +
Sbjct: 256 EAIQFFERMQDAGIGTDEVTLVGVISACSQLGAAEYADWIRDIAEKQYGYDWGYSVVLGS 315
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV 241
+L+DMY+KCG++ A VF+ +K +VF ++SMI GFA HG ++ LF EM G
Sbjct: 316 ALIDMYSKCGSVDCAYKVFKG--LKDRNVFSYSSMIMGFAMHGRADAAIKLFHEMIKTGT 373
Query: 242 KPDEITYLNL 251
P+++ +L
Sbjct: 374 APNKVFLADL 383
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 131/307 (42%), Gaps = 54/307 (17%)
Query: 73 VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEE 132
V+ L + N +D Y R +F+ + + +S +I GY +G E++ V+
Sbjct: 79 VRTLTNLNIPMDPYP--------RSIFNQVKFPNPFLYSAVIRGYSIEGILSESVKVYSF 130
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMH-HYVIDNELPLTLVLRTSLVDMYAKCG 191
MR+ P T ++ AC +G L GR MH ++ L + +L+DMY KCG
Sbjct: 131 MRMEHVGPVSFTFSAIFKACGAVGDLHLGRQMHAQSILIGGFCSDLFVSNTLIDMYIKCG 190
Query: 192 AIQEALHVF-------------------RSGLMKPS----------DVFIWNSMIGGFAC 222
++ VF +SG M + D+ W +M+ GF+
Sbjct: 191 VLECGRKVFNAMPEKDVISWTEMIVAYAKSGDMDSAHVLFDGLPVKDMVAWTAMVTGFSQ 250
Query: 223 HGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEH 282
+ +E++ F M G+ DE+T + ++SAC+ G + A + D + K
Sbjct: 251 NAKPREAIQFFERMQDAGIGTDEVTLVGVISACSQLGAAEYADWIRD------IAEKQYG 304
Query: 283 Y---------ACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAET 333
Y + ++D+ ++ G V AY+ + + S +++ G HG+ D A
Sbjct: 305 YDWGYSVVLGSALIDMYSKCGSVDCAYKVFKGLKDRNVFS-YSSMIMGFAMHGRADAAIK 363
Query: 334 VGRKLIE 340
+ ++I+
Sbjct: 364 LFHEMIK 370
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
++V ++++D Y+KCG + A +VF + +++V S+S +I G+ G D A+ +F EM
Sbjct: 310 SVVLGSALIDMYSKCGSVDCAYKVFKGLKDRNVFSYSSMIMGFAMHGRADAAIKLFHEMI 369
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRM 163
+G PN+V + + + L L + M
Sbjct: 370 KTGTAPNKVFLADLEASIPELQFLTEKHM 398
>28193.m000297 pentatricopeptide repeat-containing protein, putative
Length = 518
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 129/232 (55%), Gaps = 10/232 (4%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
N++I Y + D+ +A K+F +PVKN+V+ +M+ GY K G I +A ++F M +V+
Sbjct: 216 NAMISGYIACGDLTSAWKLFKTMPVKNVVACTAMITGYMKLGFIKLAEKLFKEMSTDNVV 275
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
+W+ +I G++ ++ + +F M G +PN T+ S+L C+ L AL GR +H V
Sbjct: 276 TWNAMISGFIENSRAEDGVKLFRTMVGFGIRPNPSTLSSLLLGCSELSALQLGRQVHQLV 335
Query: 169 IDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKE 228
+ L + TSLV MY KCG +++A +F + DV WN+MI G+A HG ++
Sbjct: 336 CKSPLASDMTAGTSLVSMYCKCGDLEDAWKLFLE--LPRKDVVTWNAMISGYALHGAGEK 393
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFF--------DCLG 272
+L LF EM G+ PD IT++ +L AC H G +F DC G
Sbjct: 394 ALRLFDEMKKEGITPDWITFVAVLLACNHAGFADLGLKYFHSMAPREIDCSG 445
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 139/283 (49%), Gaps = 20/283 (7%)
Query: 49 NSLIHMYSSFR-DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDV 107
NS++ YS R + NAR++FD IP + +S+N+ML Y D+ A+ FDL+P +D
Sbjct: 122 NSILAGYSRKRGKMKNARELFDKIPEPDTISYNTMLACYVHNSDMEKAQAFFDLIPNKDP 181
Query: 108 LSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVT---MVSVLCACAHLGALDKGRMM 164
SW+ LI G+ + G +A +F +M P N VT M+S AC G +
Sbjct: 182 ASWNTLISGFSQNGKMAKAHKLFLQM----PYKNVVTWNAMISGYIAC--------GDLT 229
Query: 165 HHYVIDNELPL-TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
+ + +P+ +V T+++ Y K G I+ A +F+ M +V WN+MI GF +
Sbjct: 230 SAWKLFKTMPVKNVVACTAMITGYMKLGFIKLAEKLFKE--MSTDNVVTWNAMISGFIEN 287
Query: 224 GLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHY 283
++ + LF M G++P+ T +LL C+ ++ + K+ +
Sbjct: 288 SRAEDGVKLFRTMVGFGIRPNPSTLSSLLLGCSELSALQLGRQVHQLVCKSPLASDMTAG 347
Query: 284 ACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
+V + + G + +A++ ++P + + A+++G HG
Sbjct: 348 TSLVSMYCKCGDLEDAWKLFLELPRKDVVTW-NAMISGYALHG 389
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 32/196 (16%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G+ P+ T L + L +LG +H + K+ SD SL+ MY
Sbjct: 300 MVGFGIRPNPSTLSSLLLGCSELSALQLGRQVHQLVCKSPLASDMTAGTSLVSMY----- 354
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
KCGD+ A ++F +P +DV++W+ +I GY
Sbjct: 355 --------------------------CKCGDLEDAWKLFLELPRKDVVTWNAMISGYALH 388
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT-LVL 179
G ++AL +F+EM+ G P+ +T V+VL AC H G D G H + E+ + ++
Sbjct: 389 GAGEKALRLFDEMKKEGITPDWITFVAVLLACNHAGFADLGLKYFHSMAPREIDCSGMLQ 448
Query: 180 RTSLVDMYAKCGAIQE 195
R LV+ + A+Q+
Sbjct: 449 RLLLVEPESTWKAVQQ 464
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 122/263 (46%), Gaps = 16/263 (6%)
Query: 73 VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK-GDYDEALAVFE 131
V +++ N ++ + + GD+ A ++F+ M + ++W+ ++ GY RK G A +F+
Sbjct: 84 VNDVILSNQVITSFIRSGDLDSALELFNNMTIKTTVTWNSILAGYSRKRGKMKNARELFD 143
Query: 132 EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG 191
++ P+P+ ++ ++L H ++K + +I N+ P + +L+ +++ G
Sbjct: 144 KI----PEPDTISYNTMLACYVHNSDMEKAQAFFD-LIPNKDPASW---NTLISGFSQNG 195
Query: 192 AIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
+ +A +F M +V WN+MI G+ G + + LF M + V + +
Sbjct: 196 KMAKAHKLFLQ--MPYKNVVTWNAMISGYIACGDLTSAWKLFKTMPVKNV----VACTAM 249
Query: 252 LSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPT 311
++ G +K A F + + + + + ++ +RA + ++ + I+P
Sbjct: 250 ITGYMKLGFIKLAEKLFKEMSTDNVVTWNAMISGFIE-NSRAEDGVKLFRTMVGFGIRPN 308
Query: 312 ASMLGALLNGCMNHGKLDLAETV 334
S L +LL GC L L V
Sbjct: 309 PSTLSSLLLGCSELSALQLGRQV 331
>29482.m000172 pentatricopeptide repeat-containing protein, putative
Length = 575
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 132/218 (60%), Gaps = 8/218 (3%)
Query: 51 LIHMYSSFRDIPNARKVFDGIPVKN-LVSWNSMLDG----YAKCGDISMARQVFDLMPEQ 105
LI +Y F +P G VK+ +VS +S+ Y++ ++ ARQ+FD E+
Sbjct: 324 LIPVYCPFGYLP-LTNCIHGFGVKSGIVSHSSVATALTTVYSRLNEMEAARQLFDESSEK 382
Query: 106 DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMH 165
+ SW+ +I GY + G ++A+++F+EM++ PN VT+ S+L ACA LGAL G+ +H
Sbjct: 383 TLASWNAMIAGYTQNGATEKAISLFQEMQMYNISPNPVTVTSILSACAQLGALTLGKWIH 442
Query: 166 HYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGL 225
V + + T+L+DMYAKCG+I EA +F S M + WN++I G+ HGL
Sbjct: 443 GLVKFKSFEYNVYVSTALIDMYAKCGSILEARRLFDS--MPEKNEVTWNAIISGYGLHGL 500
Query: 226 VKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKE 263
+E+L LF EM G++P +T+L++L AC+H GLV+E
Sbjct: 501 GQEALKLFYEMLNCGIQPTRVTFLSVLYACSHAGLVRE 538
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 149/345 (43%), Gaps = 57/345 (16%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
++PD+ T+ F+ A+ ++G ++HG + G SD FV ++L+ MY A
Sbjct: 111 LYPDNFTYAFVVSAARNFGDAKIGFSLHGRVIVDGLSSDLFVGSALVDMYFKLSREDIAL 170
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
KVFD +P ++ + +N+M I G VR Y++
Sbjct: 171 KVFDKLPERDTILYNTM-------------------------------ISGLVRVCCYED 199
Query: 126 ALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
++ +F+ M +GP+ + T+++VL A A L L G + I + + T L+
Sbjct: 200 SIRLFKYMISGNGPQFDSTTVLAVLPALAELQELRLGTEIQCLAIKLGFLSHISVVTGLI 259
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
+Y+KCG + A +F + D+ +N+MI G +G + S+ LF E G K +
Sbjct: 260 SLYSKCGDVDTASILFTD--IGRKDLISYNAMISGLTFNGETESSVRLFEEWLDSGEKVN 317
Query: 245 EITYLNL-----------LSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARA 293
+ + L L+ C HG V K+G+ S + V +R
Sbjct: 318 SSSIVGLIPVYCPFGYLPLTNCIHGFGV-----------KSGIVSHSSVATALTTVYSRL 366
Query: 294 GQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKL 338
++ A Q + + AS A++ G +G + A ++ +++
Sbjct: 367 NEMEAARQLFDESSEKTLASW-NAMIAGYTQNGATEKAISLFQEM 410
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 75/162 (46%), Gaps = 31/162 (19%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P+ +T + A A L LG IHG + +E + +VS +LI MY+ I AR++
Sbjct: 417 PNPVTVTSILSACAQLGALTLGKWIHGLVKFKSFEYNVYVSTALIDMYAKCGSILEARRL 476
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
FD +P KN V+WN+++ GY G EAL
Sbjct: 477 FDSMPEKNEVTWNAIISGYG-------------------------------LHGLGQEAL 505
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI 169
+F EM G +P VT +SVL AC+H G + +G + H +I
Sbjct: 506 KLFYEMLNCGIQPTRVTFLSVLYACSHAGLVREGDEIFHSMI 547
>30128.m008544 pentatricopeptide repeat-containing protein, putative
Length = 837
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 143/294 (48%), Gaps = 34/294 (11%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D F KA A L + G IHG+I K G ES+ V
Sbjct: 291 DEYVFSISLKACAGLKELSFGRQIHGHIVKLGLESEVSV--------------------- 329
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
G P ++D Y KC +A +VF+ + E + +SWS +I GY + G+++EAL
Sbjct: 330 -GTP---------LVDFYIKCASFELASKVFEGISEPNDVSWSAMITGYCQIGEFEEALK 379
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
+FE +R + N T S+ AC+ L G +H I L + ++++ MY+
Sbjct: 380 IFESLRSNIENLNSFTYTSIFQACSALADFSTGTQVHADAIKRSLIASQHGESAMITMYS 439
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
+CG + A F + + D W +++ G+A G E+L F M G +P+ IT+
Sbjct: 440 RCGRLDYANLAFET--IDGPDAVAWTAIVAGYAYQGNATEALKHFWRMQGSGARPNAITF 497
Query: 249 LNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEAYQ 301
+ +L+AC+H GLV E + D + K GM P +HY C++D+ +RAG + EA +
Sbjct: 498 IAVLTACSHSGLVAEGKQYLDLMSSKYGMAPTIDHYDCVIDIYSRAGYLQEALE 551
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 93/181 (51%), Gaps = 3/181 (1%)
Query: 77 VSWNSMLDG-YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRV 135
VS N+ + Y +CG + A + M E++ ++W+ L+ GY + G AL +F +M
Sbjct: 226 VSINTAISNMYVRCGWLDGAELFINNMAEKNAVAWTGLMVGYTQAGKQKNALDLFAKMVC 285
Query: 136 SGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQE 195
+ +E L ACA L L GR +H +++ L + + T LVD Y KC + +
Sbjct: 286 EDVELDEYVFSISLKACAGLKELSFGRQIHGHIVKLGLESEVSVGTPLVDFYIKCASFEL 345
Query: 196 ALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC 255
A VF G+ +P+DV W++MI G+ G +E+L +F + + TY ++ AC
Sbjct: 346 ASKVFE-GISEPNDVS-WSAMITGYCQIGEFEEALKIFESLRSNIENLNSFTYTSIFQAC 403
Query: 256 A 256
+
Sbjct: 404 S 404
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 89/177 (50%), Gaps = 2/177 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N++L Y C + A +VFD M E++++SW +I Y G D+AL++F M G
Sbjct: 129 NTVLKMYCVCESLEDAYKVFDKMIERNLISWGTIISAYAEHGLLDKALSLFISMISLGIN 188
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
PN + +L + + L G+ +H + I + L + + T++ +MY +CG + A
Sbjct: 189 PNSSIYIDLLRSLLNPSLLGIGKQIHSHSIRSGLGAGVSINTAISNMYVRCGWLDGAELF 248
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
+ M + W ++ G+ G K +LDLF++M V+ DE + L ACA
Sbjct: 249 INN--MAEKNAVAWTGLMVGYTQAGKQKNALDLFAKMVCEDVELDEYVFSISLKACA 303
>29983.m003289 pentatricopeptide repeat-containing protein, putative
Length = 824
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 147/273 (53%), Gaps = 7/273 (2%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRF---VSNSLIHMYSSFRDI 61
G+ PD +T + A +LK + H Y + G F N+++ Y+ ++
Sbjct: 382 GIRPDSITILTILHFCANVLKVDKVKETHCYSLRCGLLQSDFEPTTRNAMLDTYAKCSNV 441
Query: 62 PNARKVFDGIP-VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
A KVF + +NLV++NSM+ GY CG A +F+ MP D+ +W+ ++ G
Sbjct: 442 EYAFKVFQTLSDNRNLVTFNSMISGYVNCGLYDDAYMIFEKMPASDLTTWNLMVRGCAEN 501
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
D+A ++F E++ G KP+ VT++S+L +CA ++ + H YVI L
Sbjct: 502 DCPDQAFSLFRELQARGMKPDAVTIISLLPSCAQTASVHLMKQCHGYVIRACFD-DAHLE 560
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+D+YAKCG + A +F S D+ ++ +M+GG+A HG+ +E+L +FS+M +G
Sbjct: 561 GALLDLYAKCGDLGYAFKLFHSN--PGRDLVVFTAMVGGYAMHGMGEEALRIFSDMLDLG 618
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK 273
+KPD I +LSAC H GLV E F + K
Sbjct: 619 IKPDHIVITAVLSACCHAGLVDEGLKIFHSIEK 651
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 135/267 (50%), Gaps = 13/267 (4%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEE-MRVSGP 138
N++L + G + A +F M +D++SW+ +I G+ G++ ++L +F+E + +
Sbjct: 222 NALLSFHLMVGRVKEAELLFRRMELRDLISWNAIISGFASNGEWSKSLELFQELLYLESN 281
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE-LPLTLVLRTSLVDMYAKCGAIQEAL 197
+P+ VT+VS+L ACA L L GR +H YV+ + L + +LV YAKC + A
Sbjct: 282 EPDSVTLVSILPACAQLQNLKAGREIHSYVLRHPYLYQDTSVGNALVSFYAKCNNLVAAY 341
Query: 198 HVFRSGLMKPS-DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
H F LM PS D+ WNSM+ FA G + L MH G++PD IT L +L CA
Sbjct: 342 HTF---LMIPSRDLISWNSMLDAFAIGGRNAQFFKLLHWMHTEGIRPDSITILTILHFCA 398
Query: 257 H---GGLVKEA-WYFFDC-LGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPT 311
+ VKE Y C L ++ P + + M+D A+ V A++ +
Sbjct: 399 NVLKVDKVKETHCYSLRCGLLQSDFEPTTRN--AMLDTYAKCSNVEYAFKVFQTLSDNRN 456
Query: 312 ASMLGALLNGCMNHGKLDLAETVGRKL 338
++++G +N G D A + K+
Sbjct: 457 LVTFNSMISGYVNCGLYDDAYMIFEKM 483
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 125/291 (42%), Gaps = 71/291 (24%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGY-ESDRFVSNSLIHMYSSFRDIPNARK 66
PD +T + A A L + G IH Y+ + Y D V N+L+ SF
Sbjct: 283 PDSVTLVSILPACAQLQNLKAGREIHSYVLRHPYLYQDTSVGNALV----SF-------- 330
Query: 67 VFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEA 126
YAKC ++ A F ++P +D++SW+ ++D + G +
Sbjct: 331 -------------------YAKCNNLVAAYHTFLMIPSRDLISWNSMLDAFAIGGRNAQF 371
Query: 127 LAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL------PLTLVLR 180
+ M G +P+ +T++++L CA++ +DK + H Y + L P T R
Sbjct: 372 FKLLHWMHTEGIRPDSITILTILHFCANVLKVDKVKETHCYSLRCGLLQSDFEPTT---R 428
Query: 181 TSLVDMYAKCGAIQEALHVFRS--------------------GL----------MKPSDV 210
+++D YAKC ++ A VF++ GL M SD+
Sbjct: 429 NAMLDTYAKCSNVEYAFKVFQTLSDNRNLVTFNSMISGYVNCGLYDDAYMIFEKMPASDL 488
Query: 211 FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
WN M+ G A + ++ LF E+ G+KPD +T ++LL +CA V
Sbjct: 489 TTWNLMVRGCAENDCPDQAFSLFRELQARGMKPDAVTIISLLPSCAQTASV 539
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 121/258 (46%), Gaps = 39/258 (15%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V P +T + A + +G + H Y+ K G E+ V N+L+ M
Sbjct: 73 VKPTSVTAAVILPVCARMRDIYVGKSFHCYMIKTGMETHTLVGNALVSM----------- 121
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISM-ARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
YAKCG +S A F + +DV+SW+ +I G+ D
Sbjct: 122 --------------------YAKCGLVSYDAYAAFQSIYHKDVVSWNAIIAGFSENKMVD 161
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLG---ALDKGRMMHHYVI-DNELPLTLVLR 180
AL +F M + KPN T+ +VL A L A GR +H Y++ NE + +
Sbjct: 162 SALRLFFFMLKTQIKPNHATIATVLPLLASLATDTAYLFGREIHCYILRHNESLADVSVC 221
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSE-MHIV 239
+L+ + G ++EA +FR M+ D+ WN++I GFA +G +SL+LF E +++
Sbjct: 222 NALLSFHLMVGRVKEAELLFRR--MELRDLISWNAIISGFASNGEWSKSLELFQELLYLE 279
Query: 240 GVKPDEITYLNLLSACAH 257
+PD +T +++L ACA
Sbjct: 280 SNEPDSVTLVSILPACAQ 297
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 128/274 (46%), Gaps = 22/274 (8%)
Query: 86 YAKCGDISMARQVFDLMPE--QDVLSWSCLIDGYVRKGDYD-EALAVFEEMRVSGP-KPN 141
YAKCG S + ++F + D + W+ L+ G+ +D + + F MRV+ KP
Sbjct: 17 YAKCGAFSDSNKLFGEISNCSHDPIFWNILLSGFAASPIHDAQTFSFFNRMRVANQVKPT 76
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ-EALHVF 200
VT +L CA + + G+ H Y+I + ++ +LV MYAKCG + +A F
Sbjct: 77 SVTAAVILPVCARMRDIYVGKSFHCYMIKTGMETHTLVGNALVSMYAKCGLVSYDAYAAF 136
Query: 201 RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGL 260
+S K DV WN++I GF+ + +V +L LF M +KP+ T +L A L
Sbjct: 137 QSIYHK--DVVSWNAIIAGFSENKMVDSALRLFFFMLKTQIKPNHATIATVLPLLA--SL 192
Query: 261 VKEAWYFFDCLGKNGMTPKSEHYACMVDVMA---------RAGQVAEAYQFLCQIPIQPT 311
+ Y F G+ H + DV G+V EA ++ ++
Sbjct: 193 ATDTAYLF---GREIHCYILRHNESLADVSVCNALLSFHLMVGRVKEAELLFRRMELRDL 249
Query: 312 ASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQ 345
S A+++G ++G+ + + ++L+ LE ++
Sbjct: 250 ISW-NAIISGFASNGEWSKSLELFQELLYLESNE 282
>27985.m000873 pentatricopeptide repeat-containing protein, putative
Length = 762
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 158/330 (47%), Gaps = 37/330 (11%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G++P+ TF + A L E G +H + K G+E F +LI MY+ + +
Sbjct: 13 GMWPNEFTFAIVLSGCARLDSVEFGRLVHCNVVKLGFEFSSFCVGALIDMYAKNNRMSDC 72
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLM---------------------- 102
R+VFDG + VSW S++ GY K G A +VF+ M
Sbjct: 73 RRVFDGGVSLDTVSWTSLIAGYVKAGLPEEALEVFEQMKKVGREPDQVAFVTVINAYVAL 132
Query: 103 -------------PEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
P +V++W+ +I G+ ++G +++ +F MR +G K T+ SVL
Sbjct: 133 GRLDDALGLFFQMPNPNVVAWNVMISGHAQRGHETKSIELFCNMRKAGIKSTRSTLGSVL 192
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
A A L LD G ++H I L + + +SL++MYAKC ++ A VF + +
Sbjct: 193 SAIASLTDLDFGLLVHAEAIKQGLDSNVYVGSSLINMYAKCKELEAAKKVFDP--IDERN 250
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD 269
V +WN+M+GG+A +G E ++L S M G PDE TY ++LSACA V+
Sbjct: 251 VVLWNAMVGGYAQNGYAHEVIELLSNMKSCGFHPDEFTYTSILSACACLEHVEGGRQLHS 310
Query: 270 CLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
+ KN ++D+ A++G + +A
Sbjct: 311 IIIKNKFASNLFVGNALIDMYAKSGFLEDA 340
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 165/335 (49%), Gaps = 39/335 (11%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + G+ T + A A L + GL +H K G +S+ +V +SLI+MY
Sbjct: 176 MRKAGIKSTRSTLGSVLSAIASLTDLDFGLLVHAEAIKQGLDSNVYVGSSLINMY----- 230
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AKC ++ A++VFD + E++V+ W+ ++ GY +
Sbjct: 231 --------------------------AKCKELEAAKKVFDPIDERNVVLWNAMVGGYAQN 264
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G E + + M+ G P+E T S+L ACA L ++ GR +H +I N+ L +
Sbjct: 265 GYAHEVIELLSNMKSCGFHPDEFTYTSILSACACLEHVEGGRQLHSIIIKNKFASNLFVG 324
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+DMYAK G +++A F LMK D WN++I G+ E+ +F +MH+VG
Sbjct: 325 NALIDMYAKSGFLEDARKQFE--LMKSRDNVSWNAIIVGYVQEEDEVEAFLMFQKMHLVG 382
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVAEA 299
+ PDE++ ++LSACA+ ++ CL K+G+ + ++D+ A+ G V A
Sbjct: 383 ILPDEVSLASILSACANVEGFEQG-KPIHCLSVKSGLETSLYAGSSLIDMYAKCGDVGSA 441
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETV 334
+ L +P S + AL+ G + ++L E +
Sbjct: 442 QKILKSMPEHSVVS-INALIAG---YAPVNLEEAI 472
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 132/255 (51%), Gaps = 34/255 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G PD T+ + A ACL E G +H I K + S+ FV N+LI M
Sbjct: 277 MKSCGFHPDEFTYTSILSACACLEHVEGGRQLHSIIIKNKFASNLFVGNALIDM------ 330
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
YAK G + AR+ F+LM +D +SW+ +I GYV++
Sbjct: 331 -------------------------YAKSGFLEDARKQFELMKSRDNVSWNAIIVGYVQE 365
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
D EA +F++M + G P+EV++ S+L ACA++ ++G+ +H + + L +L
Sbjct: 366 EDEVEAFLMFQKMHLVGILPDEVSLASILSACANVEGFEQGKPIHCLSVKSGLETSLYAG 425
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+SL+DMYAKCG + A + +S M V N++I G+A L +E++ LF +M G
Sbjct: 426 SSLIDMYAKCGDVGSAQKILKS--MPEHSVVSINALIAGYAPVNL-EEAIILFEKMQAEG 482
Query: 241 VKPDEITYLNLLSAC 255
+ P EIT+ +LL C
Sbjct: 483 LNPSEITFASLLDGC 497
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 141/296 (47%), Gaps = 44/296 (14%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYE-SDRFVSNSLIHMYSSFRDIPN 63
G+ P +TF L + LG+ IH I K G + D F+ SL+ MY +
Sbjct: 482 GLNPSEITFASLLDGCGGPEQLILGIQIHCLILKRGLQYDDDFLGVSLLGMYVKSLRKTD 541
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
AR +F P+ +L W+ +I G +
Sbjct: 542 ARILFSEFS-----------------------------NPKSTIL-WTAMISGLAQNNCS 571
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
DEAL ++EMR P++ T VSVL ACA L ++ GR +H + L L ++L
Sbjct: 572 DEALQFYQEMRSCNALPDQATFVSVLRACAVLSSIGDGREIHSLIFRTGLDLDESTCSAL 631
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
+DMYAKCG ++ ++ VF + +DV WNSMI GFA +G + +L +F+EM V P
Sbjct: 632 IDMYAKCGDVRSSMQVFED-MHSKNDVISWNSMIVGFAKNGYAENALRIFNEMKQAHVIP 690
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFD----------CLGKNGMTPKSEHYACMVDV 289
D++T+L +L+AC+H G V E FD CL + + K+ YA MV++
Sbjct: 691 DDVTFLGVLTACSHAGRVSEGRQIFDMKPSFVTAPACLVREEVLTKA--YAKMVEI 744
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 132/299 (44%), Gaps = 34/299 (11%)
Query: 4 VGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPN 63
VG+ PD ++ + A A + E G IH K+G E+ + +SLI MY
Sbjct: 381 VGILPDEVSLASILSACANVEGFEQGKPIHCLSVKSGLETSLYAGSSLIDMY-------- 432
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
AKCGD+ A+++ MPE V+S + LI GY +
Sbjct: 433 -----------------------AKCGDVGSAQKILKSMPEHSVVSINALIAGYAPV-NL 468
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL-VLRTS 182
+EA+ +FE+M+ G P+E+T S+L C L G +H ++ L L S
Sbjct: 469 EEAIILFEKMQAEGLNPSEITFASLLDGCGGPEQLILGIQIHCLILKRGLQYDDDFLGVS 528
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
L+ MY K +A +F S P +W +MI G A + E+L + EM
Sbjct: 529 LLGMYVKSLRKTDARILF-SEFSNPKSTILWTAMISGLAQNNCSDEALQFYQEMRSCNAL 587
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQ 301
PD+ T++++L ACA + + + + G+ + ++D+ A+ G V + Q
Sbjct: 588 PDQATFVSVLRACAVLSSIGDGREIHSLIFRTGLDLDESTCSALIDMYAKCGDVRSSMQ 646
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 119/246 (48%), Gaps = 12/246 (4%)
Query: 137 GPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEA 196
G PNE T VL CA L +++ GR++H V+ + +L+DMYAK + +
Sbjct: 13 GMWPNEFTFAIVLSGCARLDSVEFGRLVHCNVVKLGFEFSSFCVGALIDMYAKNNRMSDC 72
Query: 197 LHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
VF G+ D W S+I G+ GL +E+L++F +M VG +PD++ ++ +++A
Sbjct: 73 RRVFDGGV--SLDTVSWTSLIAGYVKAGLPEEALEVFEQMKKVGREPDQVAFVTVINAYV 130
Query: 257 HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTAS 313
G + +A F + P + M+ A+ G ++ + C + I+ T S
Sbjct: 131 ALGRLDDALGLFFQMP----NPNVVAWNVMISGHAQRGHETKSIELFCNMRKAGIKSTRS 186
Query: 314 MLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVG--LSNVYAIFRRWDKARSMREA 371
LG++L+ + LD V + I+ + YVG L N+YA + + A+ + +
Sbjct: 187 TLGSVLSAIASLTDLDFGLLVHAEAIK-QGLDSNVYVGSSLINMYAKCKELEAAKKVFDP 245
Query: 372 MERMGV 377
++ V
Sbjct: 246 IDERNV 251
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 39/194 (20%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M PD TF + +A A L G IH I + G + D ++LI MY+ D
Sbjct: 581 MRSCNALPDQATFVSVLRACAVLSSIGDGREIHSLIFRTGLDLDESTCSALIDMYAKCGD 640
Query: 61 IPNARKVFDGIPVKN-LVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
+ ++ +VF+ + KN ++SWNSM+ G+AK +GY
Sbjct: 641 VRSSMQVFEDMHSKNDVISWNSMIVGFAK--------------------------NGYA- 673
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR----MMHHYVIDNELPL 175
+ AL +F EM+ + P++VT + VL AC+H G + +GR M +V P
Sbjct: 674 ----ENALRIFNEMKQAHVIPDDVTFLGVLTACSHAGRVSEGRQIFDMKPSFVT---APA 726
Query: 176 TLVLRTSLVDMYAK 189
LV L YAK
Sbjct: 727 CLVREEVLTKAYAK 740
>30157.m000797 pentatricopeptide repeat-containing protein, putative
Length = 344
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 130/244 (53%), Gaps = 3/244 (1%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PDH + L KA A L G +H + + D V +SLI MY+ AR V
Sbjct: 103 PDHFVYATLVKACASLCAVRQGKQVHARFVLSPFSDDDVVKSSLIDMYAKCGLPKIARAV 162
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
FD I KN VSW +M+ GYAK G A ++F P +++ SW+ LI G V+ G +
Sbjct: 163 FDSILAKNAVSWTAMISGYAKSGLKVEAMELFSSFPVKNLYSWTALISGLVQSGKGIDGC 222
Query: 128 AVFEEMRVSGPK-PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDM 186
+F EMR G + + + SV+ ACA+L L+ G+ +H +I L + +LVDM
Sbjct: 223 YLFLEMRREGIDIIDPLVLSSVVGACANLAVLEFGKQLHGLIIALGYESCLFISNALVDM 282
Query: 187 YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
YAKC I A +F + K DV W S+I G A HG KE+LDL+ +M + GVKP+E
Sbjct: 283 YAKCSDILAAKEIFDRMIYK--DVVSWTSIIVGAAQHGRAKEALDLYDDMVLAGVKPNEP 340
Query: 247 TYLN 250
+ +
Sbjct: 341 CWFS 344
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 106/198 (53%), Gaps = 7/198 (3%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM-RVSGP 138
N++L+ Y KCG + A +F+ MP++D +SW+ ++ Y ++ L++F M V
Sbjct: 42 NTLLNAYGKCGLLQDAYFLFEEMPQRDHVSWASILTAYNLANLPNKTLSIFPTMFIVDKL 101
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
+P+ +++ ACA L A+ +G+ +H + + V+++SL+DMYAKCG + A
Sbjct: 102 EPDHFVYATLVKACASLCAVRQGKQVHARFVLSPFSDDDVVKSSLIDMYAKCGLPKIARA 161
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHG 258
VF S L K + W +MI G+A GL E+++LFS + + ++ L+S
Sbjct: 162 VFDSILAK--NAVSWTAMISGYAKSGLKVEAMELFSSFPVKNL----YSWTALISGLVQS 215
Query: 259 GLVKEAWYFFDCLGKNGM 276
G + Y F + + G+
Sbjct: 216 GKGIDGCYLFLEMRREGI 233
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 81/204 (39%), Gaps = 45/204 (22%)
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
+ +H +I L + L +L++ Y KCG +Q+A +F M D W S++ +
Sbjct: 22 AKKLHAQIIKLSLKESEPLPNTLLNAYGKCGLLQDAYFLFEE--MPQRDHVSWASILTAY 79
Query: 221 ACHGLVKESLDLFSEMHIVG-VKPDEITYLNLLSAC------------------------ 255
L ++L +F M IV ++PD Y L+ AC
Sbjct: 80 NLANLPNKTLSIFPTMFIVDKLEPDHFVYATLVKACASLCAVRQGKQVHARFVLSPFSDD 139
Query: 256 -----------AHGGLVKEAWYFFDC-LGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
A GL K A FD L KN ++ + M+ A++G EA +
Sbjct: 140 DVVKSSLIDMYAKCGLPKIARAVFDSILAKNAVS-----WTAMISGYAKSGLKVEAMELF 194
Query: 304 CQIPIQPTASMLGALLNGCMNHGK 327
P++ S AL++G + GK
Sbjct: 195 SSFPVKNLYSW-TALISGLVQSGK 217
>30128.m008954 pentatricopeptide repeat-containing protein, putative
Length = 544
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 126/205 (61%), Gaps = 2/205 (0%)
Query: 55 YSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLI 114
Y+ I A ++F+ +P+K + + N M+ G+ + G++ A+ FD M E+D +WS +I
Sbjct: 244 YTRSGRIKEAAELFEAMPMKPVPACNEMIIGFGQSGEVGKAKWTFDQMREKDDGTWSAMI 303
Query: 115 DGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELP 174
Y RKG EAL +F M+ G +PN +++S+L C L +LD GR +H ++ ++
Sbjct: 304 KVYERKGLELEALDLFRLMQREGVRPNFPSIISILSVCGSLASLDYGRQVHTQLVRSQFD 363
Query: 175 LTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFS 234
+ + + L+ MY KCG + +A VF MK D +WNS+I G+A HGL +E+L++F
Sbjct: 364 FDVYVSSVLITMYIKCGDLVKAKRVFDRFSMK--DTVMWNSIITGYAQHGLGEEALEVFF 421
Query: 235 EMHIVGVKPDEITYLNLLSACAHGG 259
EM G+ PDEIT++ +L+AC++ G
Sbjct: 422 EMLSSGISPDEITFIGVLTACSYSG 446
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 156/324 (48%), Gaps = 50/324 (15%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
N+++ Y + A +F+ +P +N VSWN ++ GY K G I+ AR+VFD MPE++V+
Sbjct: 52 NAIVAGYFQNKQPREAHDLFNKMPDRNTVSWNGLISGYVKNGMINEAREVFDKMPERNVV 111
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
SW+ ++ GY+++G +A ++F EM P+ N V+ +L G ++ GR+
Sbjct: 112 SWTAMVRGYIQEGMIKQAESLFWEM----PEKNVVSWTVMLG-----GLIEDGRVNEAIK 162
Query: 169 IDNELPLT-LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
+ + +PL +V RT+++ G + EA +F M +V W +MI G+A + V
Sbjct: 163 LYDLMPLKDVVARTNMIGGLCMEGRLSEAREIFDE--MPKRNVVAWTTMISGYAMNNKVD 220
Query: 228 ESLDLFSEMHIVGVKPD--EITYLNLLSACAHGGLVKEAWYFFDCL-------------- 271
+ LF M PD E+T+ +L G +KEA F+ +
Sbjct: 221 VARKLFEVM------PDKNEVTWTAMLMGYTRSGRIKEAAELFEAMPMKPVPACNEMIIG 274
Query: 272 -GKNGMTPKSE------------HYACMVDVMARAGQVAEA---YQFLCQIPIQPTASML 315
G++G K++ ++ M+ V R G EA ++ + + ++P +
Sbjct: 275 FGQSGEVGKAKWTFDQMREKDDGTWSAMIKVYERKGLELEALDLFRLMQREGVRPNFPSI 334
Query: 316 GALLNGCMNHGKLDLAETVGRKLI 339
++L+ C + LD V +L+
Sbjct: 335 ISILSVCGSLASLDYGRQVHTQLV 358
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 31/156 (19%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R GV P+ + + L + G +H + ++ ++ D +VS+ LI MY D
Sbjct: 322 MQREGVRPNFPSIISILSVCGSLASLDYGRQVHTQLVRSQFDFDVYVSSVLITMYIKCGD 381
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A++VFD +K+ V WNS++ GYA+
Sbjct: 382 LVKAKRVFDRFSMKDTVMWNSIITGYAQ-------------------------------H 410
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLG 156
G +EAL VF EM SG P+E+T + VL AC++ G
Sbjct: 411 GLGEEALEVFFEMLSSGISPDEITFIGVLTACSYSG 446
>28644.m000922 pentatricopeptide repeat-containing protein, putative
Length = 364
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 132/259 (50%), Gaps = 32/259 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+R D LT F+ KA A +L +H +I + G+ +D + +L
Sbjct: 94 MIRGSYKVDALTCSFVLKACARVLAFSESTQLHSHIVRKGFVADALLGTTL--------- 144
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
LD YAK GD+ A+++FD M +D+ SW+ LI G+ +
Sbjct: 145 ----------------------LDLYAKTGDLDSAQKMFDEMIVKDIASWNALISGFAQG 182
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
EAL +F+ M V G KPNE+T++ L AC+ LGA +G +H Y+ +L + + +
Sbjct: 183 NKPSEALGLFKRMEVLGFKPNEITVLGALSACSQLGAFKEGEKIHEYIRSQKLDMNVQVC 242
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+ +DMYAKCG +A VF S S V WN+MI FA HG ++L LF MH G
Sbjct: 243 NAAIDMYAKCGFADKAYLVFESMSCGKSLV-TWNTMIMAFAMHGDGDKALKLFKYMHQEG 301
Query: 241 VKPDEITYLNLLSACAHGG 259
V PD ++YL +L AC H G
Sbjct: 302 VSPDAVSYLAVLCACNHSG 320
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 2/211 (0%)
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
++S+A + F + W+ ++ G ++ D ++ ++ M K + +T VL
Sbjct: 51 NNLSVAIKAFYQILTPSTNDWNAVLRGLIQSPDPIDSFKWYKTMIRGSYKVDALTCSFVL 110
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
ACA + A + +H +++ +L T+L+D+YAK G + A +F ++K D
Sbjct: 111 KACARVLAFSESTQLHSHIVRKGFVADALLGTTLLDLYAKTGDLDSAQKMFDEMIVK--D 168
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD 269
+ WN++I GFA E+L LF M ++G KP+EIT L LSAC+ G KE +
Sbjct: 169 IASWNALISGFAQGNKPSEALGLFKRMEVLGFKPNEITVLGALSACSQLGAFKEGEKIHE 228
Query: 270 CLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
+ + + +D+ A+ G +AY
Sbjct: 229 YIRSQKLDMNVQVCNAAIDMYAKCGFADKAY 259
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMP-EQDVLSWSCLIDGYVRKGDYDEALAVFEEM 133
N+ N+ +D YAKCG A VF+ M + +++W+ +I + GD D+AL +F+ M
Sbjct: 238 NVQVCNAAIDMYAKCGFADKAYLVFESMSCGKSLVTWNTMIMAFAMHGDGDKALKLFKYM 297
Query: 134 RVSGPKPNEVTMVSVLCACAHLGALD 159
G P+ V+ ++VLCAC H G D
Sbjct: 298 HQEGVSPDAVSYLAVLCACNHSGKED 323
>30055.m001631 pentatricopeptide repeat-containing protein, putative
Length = 302
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 146/277 (52%), Gaps = 4/277 (1%)
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
+A+ + +GI ++ + + ++ YA C + A +F Q ++ LI Y
Sbjct: 27 HAQTITNGIYHRDFIR-SKLVSAYASCTQMRQAALLFSFTNRQTTFLFNSLIRAYASLNL 85
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTS 182
+ +L+ F M + + T+ SVL +CA L A+ G+ +H ++ N L L +
Sbjct: 86 FSHSLSFFRRMLDACKPIDRHTLPSVLKSCAGLSAVRLGQQVHGILLINGLAFDLANSNA 145
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
L++MYAKCG + A VF M + W +M+ G+ HG E L LF+ M G
Sbjct: 146 LINMYAKCGNLAGARKVFDR--MPARNEVSWATMMAGYGMHGKGGEVLVLFNRMVEEGSS 203
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQ 301
D + +LSAC+HGG+V++ +F + + G+ P EHY CMVD++ RAG+V EA +
Sbjct: 204 VDAVCLTAVLSACSHGGMVEKGAEYFGMMEERFGVKPSLEHYTCMVDMLGRAGRVEEAEE 263
Query: 302 FLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKL 338
+ ++ I+P + ALL C HGK+D+AE V R +
Sbjct: 264 LVMRMEIKPDEVLWAALLGSCKIHGKVDVAERVSRNV 300
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 37/221 (16%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D T P + K+ A L LG +HG + G D SN+LI+MY+ ++ ARKVF
Sbjct: 104 DRHTLPSVLKSCAGLSAVRLGQQVHGILLINGLAFDLANSNALINMYAKCGNLAGARKVF 163
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
D +P +N VSW +M+ GY G KG E L
Sbjct: 164 DRMPARNEVSWATMMAGYGMHG-----------------------------KG--GEVLV 192
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE---LPLTLVLRTSLVD 185
+F M G + V + +VL AC+H G ++KG ++ + E + +L T +VD
Sbjct: 193 LFNRMVEEGSSVDAVCLTAVLSACSHGGMVEKG--AEYFGMMEERFGVKPSLEHYTCMVD 250
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLV 226
M + G ++EA + +KP +V +W +++G HG V
Sbjct: 251 MLGRAGRVEEAEELVMRMEIKPDEV-LWAALLGSCKIHGKV 290
>29761.m000418 pentatricopeptide repeat-containing protein, putative
Length = 438
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 130/233 (55%), Gaps = 35/233 (15%)
Query: 7 FP--DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
FP + T F+ KA A ++ E G IH I ++G+ + +V +SL+ +Y
Sbjct: 227 FPRANTFTMAFVLKACASIMAFEEGRQIHARILRSGFSLNPYVQSSLVSLY--------- 277
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
KC +I +A+QVFD + E++++ WS +I GY R G +
Sbjct: 278 ----------------------GKCEEIRLAKQVFDEITERNLVCWSAMISGYARVGMVN 315
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
EAL++F EM+ G +P+EV++V V+ ACA GALD GR +H Y+ + + L L T+LV
Sbjct: 316 EALSMFREMQEVGIEPDEVSLVGVISACAMAGALDIGRWIHAYIKKRMIHIDLELNTALV 375
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
+MYAKCG I++A +F M D W+SMI G A HGL +++L++FS M
Sbjct: 376 NMYAKCGCIEKAKEIF--DYMPVKDSKAWSSMIVGLAIHGLAEDALEMFSRME 426
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 128/239 (53%), Gaps = 5/239 (2%)
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDG-YVRKGDYDEALAVFEEMRVSG-PKPNEVTMVS 147
GD++ AR++F +P + ++ +I G K E +++ M G P+ N TM
Sbjct: 178 GDLNYARKIFAQIPNPGIFPYNTIIRGCSYAKNPSREPYFLYKSMVTRGFPRANTFTMAF 237
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP 207
VL ACA + A ++GR +H ++ + L +++SLV +Y KC I+ A VF +
Sbjct: 238 VLKACASIMAFEEGRQIHARILRSGFSLNPYVQSSLVSLYGKCEEIRLAKQVFDE--ITE 295
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYF 267
++ W++MI G+A G+V E+L +F EM VG++PDE++ + ++SACA G + +
Sbjct: 296 RNLVCWSAMISGYARVGMVNEALSMFREMQEVGIEPDEVSLVGVISACAMAGALDIGRWI 355
Query: 268 FDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
+ K + E +V++ A+ G + +A + +P++ + + +++ G HG
Sbjct: 356 HAYIKKRMIHIDLELNTALVNMYAKCGCIEKAKEIFDYMPVKDSKAW-SSMIVGLAIHG 413
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 56/104 (53%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M VG+ PD ++ + A A ++G IH YI K D ++ +L++MY+
Sbjct: 324 MQEVGIEPDEVSLVGVISACAMAGALDIGRWIHAYIKKRMIHIDLELNTALVNMYAKCGC 383
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPE 104
I A+++FD +PVK+ +W+SM+ G A G A ++F M E
Sbjct: 384 IEKAKEIFDYMPVKDSKAWSSMIVGLAIHGLAEDALEMFSRMEE 427
>30068.m002662 GTP-binding protein alpha subunit, gna, putative
Length = 1203
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/250 (36%), Positives = 133/250 (53%), Gaps = 34/250 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML V D+ T+P L KA A L + + IHG+I K G+E D +V NSLI+MY
Sbjct: 983 MLEKEVQSDNFTYPALIKACAWLRAIDESMQIHGHIFKLGFEEDLYVQNSLINMY----- 1037
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
KCG I ++ VF + +D+ SWS +I +
Sbjct: 1038 --------------------------GKCGKIELSCDVFKQIEHKDIASWSSIIAAHSSL 1071
Query: 121 GDYDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
G + E + FEEM + +P E +VSVL AC+HLGALD GR +H ++ N L + +
Sbjct: 1072 GLWSECVQFFEEMIQDRSYRPEESLLVSVLSACSHLGALDLGRCLHGVLLRNFSELNVTV 1131
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+TSL+DMY CG I++ +F+ M + F ++ MI G A HG E+L++FSEM
Sbjct: 1132 QTSLIDMYINCGCIEKGFCLFQR--MSKKNHFSYSVMISGLAMHGRSMEALEVFSEMLDE 1189
Query: 240 GVKPDEITYL 249
G++PD++ Y+
Sbjct: 1190 GLQPDDVVYV 1199
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 88/171 (51%), Gaps = 3/171 (1%)
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
G + A +F + + ++ +I GYV + AL ++ EM + + T +++
Sbjct: 940 GSMDYACSIFRQIDQPGSFEYNTMIKGYVSDFKMENALLLYYEMLEKEVQSDNFTYPALI 999
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
ACA L A+D+ +H ++ L ++ SL++MY KCG I+ + VF+ ++ D
Sbjct: 1000 KACAWLRAIDESMQIHGHIFKLGFEEDLYVQNSLINMYGKCGKIELSCDVFKQ--IEHKD 1057
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEM-HIVGVKPDEITYLNLLSACAHGG 259
+ W+S+I + GL E + F EM +P+E +++LSAC+H G
Sbjct: 1058 IASWSSIIAAHSSLGLWSECVQFFEEMIQDRSYRPEESLLVSVLSACSHLG 1108
>30026.m001450 pentatricopeptide repeat-containing protein, putative
Length = 640
Score = 150 bits (380), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 134/234 (57%), Gaps = 3/234 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N++LD Y+KCGD++ A +VF M E+ V+SW+ LI GY R+G E + +F EM G +
Sbjct: 340 NTLLDMYSKCGDLNNAIRVFQKMGERSVVSWTSLIAGYAREGLSGEGIRLFHEMEREGVR 399
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
P+ T+ +VL ACA G+L+ G+ +H YV +N + ++ SL+DMYAKCG++++A V
Sbjct: 400 PDNFTVTAVLHACACSGSLEIGKDVHDYVKENNMQKDRIVCNSLMDMYAKCGSMEDANLV 459
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F M D+ WN+MIGG++ +G E+L LF M + +KPD T +L ACA
Sbjct: 460 FLE--MPNKDIVSWNTMIGGYSKNGRPNETLHLFVAM-VQELKPDGRTMACILPACASLA 516
Query: 260 LVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTAS 313
+ + +NG ++D+ A+ G +A A F IP++ S
Sbjct: 517 ALDRGREIHGYIQRNGCFDDLHVANALIDMYAKCGALALARLFFDMIPVKDLIS 570
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 174/378 (46%), Gaps = 38/378 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML +G+ + T + K A L + G +HGY+ K G+ S V NSLI Y R
Sbjct: 191 MLDLGIQVNSHTVSCILKCFAALGSVKEGEWVHGYLLKLGFGSYNTVVNSLISFYFKTRK 250
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I A +VFD + +D++SW+ +I G V
Sbjct: 251 I-------------------------------EAAYEVFDELKNRDIVSWNSMISGTVAN 279
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
++ + VF+EM G + VT+V+VL ACA+ G GR++H + I +L +
Sbjct: 280 DLPEKGIQVFKEMLYLGVSFDLVTLVNVLAACANSGNFPLGRVLHAFAIKAQLDQRMTFV 339
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+DMY+KCG + A+ VF+ M V W S+I G+A GL E + LF EM G
Sbjct: 340 NTLLDMYSKCGDLNNAIRVFQK--MGERSVVSWTSLIAGYAREGLSGEGIRLFHEMEREG 397
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
V+PD T +L ACA G ++ D + +N M ++D+ A+ G + +A
Sbjct: 398 VRPDNFTVTAVLHACACSGSLEIGKDVHDYVKENNMQKDRIVCNSLMDMYAKCGSMEDAN 457
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLI-ELEPHQDGRYVG-LSNVYAI 358
++P + S ++ G +G+ + + ++ EL+P DGR + + A
Sbjct: 458 LVFLEMPNKDIVSW-NTMIGGYSKNGRPNETLHLFVAMVQELKP--DGRTMACILPACAS 514
Query: 359 FRRWDKARSMREAMERMG 376
D+ R + ++R G
Sbjct: 515 LAALDRGREIHGYIQRNG 532
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 106/219 (48%), Gaps = 34/219 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R GV PD+ T + A AC E+G +H Y+ + + DR V NSL+ MY+
Sbjct: 393 MEREGVRPDNFTVTAVLHACACSGSLEIGKDVHDYVKENNMQKDRIVCNSLMDMYAKCGS 452
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +A VF +P K++VSWN+M+ GY+K
Sbjct: 453 MEDANLVFLEMPNKDIVSWNTMIGGYSK-------------------------------N 481
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +E L +F M V KP+ TM +L ACA L ALD+GR +H Y+ N L +
Sbjct: 482 GRPNETLHLFVAM-VQELKPDGRTMACILPACASLAALDRGREIHGYIQRNGCFDDLHVA 540
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGG 219
+L+DMYAKCGA+ A F ++ D+ W MI G
Sbjct: 541 NALIDMYAKCGALALARLFF--DMIPVKDLISWTVMIAG 577
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
Y CGDI R +FD + + V W+ ++ GY + G ++E++ +F +M G + N T+
Sbjct: 144 YVNCGDIREGRVIFDKIANEKVFLWNLMLSGYAKIGAFEESVYLFRKMLDLGIQVNSHTV 203
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
+L A LG++ +G +H Y++ + SL+ Y K I+ A VF +
Sbjct: 204 SCILKCFAALGSVKEGEWVHGYLLKLGFGSYNTVVNSLISFYFKTRKIEAAYEVFDE--L 261
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
K D+ WNSMI G + L ++ + +F EM +GV D +T +N+L+ACA+ G
Sbjct: 262 KNRDIVSWNSMISGTVANDLPEKGIQVFKEMLYLGVSFDLVTLVNVLAACANSG 315
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 138 PKPN--EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQE 195
PK N T S+L CA L +L +G+ +H ++ + + + +L T LV MY CG I+E
Sbjct: 93 PKSNIDSNTYCSILQLCAELNSLQEGKKVHSFISSSGIFVDGLLGTKLVFMYVNCGDIRE 152
Query: 196 ALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC 255
+F + VF+WN M+ G+A G +ES+ LF +M +G++ + T +L
Sbjct: 153 GRVIFDK--IANEKVFLWNLMLSGYAKIGAFEESVYLFRKMLDLGIQVNSHTVSCILKCF 210
Query: 256 AHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQ 301
A G VKE + L K G + ++ + ++ AY+
Sbjct: 211 AALGSVKEGEWVHGYLLKLGFGSYNTVVNSLISFYFKTRKIEAAYE 256
>29630.m000788 pentatricopeptide repeat-containing protein, putative
Length = 502
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 182/389 (46%), Gaps = 54/389 (13%)
Query: 1 MLRVG-VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYE------SDRFVS--NSL 51
MLR G FPD+ T+P + KA + L ELG IHG K E +R V N +
Sbjct: 70 MLRSGYCFPDNYTYPVVIKACSELGLIELGKMIHGQTVKEAAERIFDVMKERSVISWNIM 129
Query: 52 IHMY-----------------------------------SSFRDIPNARKVFDGIPVKNL 76
I+ Y +++ R+V + K+L
Sbjct: 130 INGYFKNGCAEKALMVFNQMVDLGVEIDCASVVSVLPACGHLKELEMGRRVHATVEDKDL 189
Query: 77 ----VSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEE 132
+ N+++D YAKCG ++ AR VFD M E+DV+SW+ +I+GY+ GD AL +F
Sbjct: 190 GNKIAARNALIDMYAKCGSMAEARLVFDGMDERDVISWTSMINGYILNGDEKSALTLFRT 249
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
M++ P+ VT+ SVL AC + L GR H + + L +++ TSL+DMYAKC
Sbjct: 250 MQMERIIPSSVTIASVLSACIN---LKDGRCFHGWTMRQNLDSEIIVETSLIDMYAKCNR 306
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
+ + V R WN+M+ G + L E++ LF +M + V+PD T+ +LL
Sbjct: 307 VDLSYGVLRR--TSGERTAPWNAMLSGCIHNDLATEAITLFKQMLLKKVEPDGATFNSLL 364
Query: 253 SACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTA 312
A A + A L K G E C++D+ ++ G + A++ IPI
Sbjct: 365 PAYAILADLLPAKNIHCYLKKTGFLSGLEVATCLIDIYSKCGSLESAHRIFNAIPIGVRD 424
Query: 313 SML-GALLNGCMNHGKLDLAETVGRKLIE 340
+++G HG + A ++ R++++
Sbjct: 425 IFAWSVIISGYGMHGHGETAVSLFRQMVQ 453
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 153/283 (54%), Gaps = 7/283 (2%)
Query: 95 ARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAH 154
A ++FD+M E+ V+SW+ +I+GY + G ++AL VF +M G + + ++VSVL AC H
Sbjct: 111 AERIFDVMKERSVISWNIMINGYFKNGCAEKALMVFNQMVDLGVEIDCASVVSVLPACGH 170
Query: 155 LGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWN 214
L L+ GR +H V D +L + R +L+DMYAKCG++ EA VF M DV W
Sbjct: 171 LKELEMGRRVHATVEDKDLGNKIAARNALIDMYAKCGSMAEARLVFDG--MDERDVISWT 228
Query: 215 SMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN 274
SMI G+ +G K +L LF M + + P +T ++LSAC + +K+ F +
Sbjct: 229 SMINGYILNGDEKSALTLFRTMQMERIIPSSVTIASVLSACIN---LKDGRCFHGWTMRQ 285
Query: 275 GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETV 334
+ + ++D+ A+ +V +Y L + + TA A+L+GC+++ A T+
Sbjct: 286 NLDSEIIVETSLIDMYAKCNRVDLSYGVLRRTSGERTAPW-NAMLSGCIHNDLATEAITL 344
Query: 335 GRKLIELEPHQDG-RYVGLSNVYAIFRRWDKARSMREAMERMG 376
++++ + DG + L YAI A+++ +++ G
Sbjct: 345 FKQMLLKKVEPDGATFNSLLPAYAILADLLPAKNIHCYLKKTG 387
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 104/188 (55%)
Query: 76 LVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRV 135
++ S++D YAKC + ++ V + W+ ++ G + EA+ +F++M +
Sbjct: 291 IIVETSLIDMYAKCNRVDLSYGVLRRTSGERTAPWNAMLSGCIHNDLATEAITLFKQMLL 350
Query: 136 SGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQE 195
+P+ T S+L A A L L + +H Y+ L + T L+D+Y+KCG+++
Sbjct: 351 KKVEPDGATFNSLLPAYAILADLLPAKNIHCYLKKTGFLSGLEVATCLIDIYSKCGSLES 410
Query: 196 ALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC 255
A +F + + D+F W+ +I G+ HG + ++ LF +M GV+P+E+T+ ++L AC
Sbjct: 411 AHRIFNAIPIGVRDIFAWSVIISGYGMHGHGETAVSLFRQMVQSGVRPNEVTFTSILHAC 470
Query: 256 AHGGLVKE 263
+H GLV E
Sbjct: 471 SHAGLVDE 478
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 74/160 (46%), Gaps = 29/160 (18%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML V PD TF L A A L IH Y+ K G+ S V+ LI +YS
Sbjct: 348 MLLKKVEPDGATFNSLLPAYAILADLLPAKNIHCYLKKTGFLSGLEVATCLIDIYSKCGS 407
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +A ++F+ IP+ R +F +WS +I GY
Sbjct: 408 LESAHRIFNAIPIG--------------------VRDIF---------AWSVIISGYGMH 438
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK 160
G + A+++F +M SG +PNEVT S+L AC+H G +D+
Sbjct: 439 GHGETAVSLFRQMVQSGVRPNEVTFTSILHACSHAGLVDE 478
>29724.m000862 pentatricopeptide repeat-containing protein, putative
Length = 525
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 125/206 (60%), Gaps = 2/206 (0%)
Query: 44 DRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMP 103
D N+++ Y+ + A +F+ + K++VSWN+M+ YA+ G + A +VF M
Sbjct: 318 DMVCFNTMLAGYTQCGRVDEAIHLFEQMVKKDIVSWNTMVAAYAQVGQMERALKVFKEMG 377
Query: 104 EQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRM 163
E++++SW+ LI G++ G Y +AL F M+ G KP++ T L +CA + AL GR
Sbjct: 378 ERNLVSWNSLISGFMLHGMYLDALWCFVLMQHEGKKPDQSTFACALSSCAIVAALQVGRQ 437
Query: 164 MHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
+HH VI + L + +L+ MYAKCG I EA VF+ + +DV WNS+IGG+A +
Sbjct: 438 LHHLVIKSGYINDLFVCNALITMYAKCGKILEAKLVFKG--ICNADVVSWNSLIGGYALN 495
Query: 224 GLVKESLDLFSEMHIVGVKPDEITYL 249
G +E+L LF EM + GV PD++T++
Sbjct: 496 GCGEEALTLFEEMKLAGVVPDQVTFI 521
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 144/280 (51%), Gaps = 18/280 (6%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
N++I Y R I A K+F+ +P ++ VSW +M++GY + G + AR+ +P +++
Sbjct: 230 NAMISAYVQSRQIDEAEKLFEEMPKRDSVSWTTMINGYVRAGKLDEARKTLSKLPYKNIA 289
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
+ + +I GY++ DEA +F E+ P+ V ++L G +D+ + +
Sbjct: 290 AQTAMISGYIKYNKIDEARQIFNEI----GTPDMVCFNTMLAGYTQCGRVDEAIHLFEQM 345
Query: 169 IDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKE 228
+ ++ V ++V YA+ G ++ AL VF+ M ++ WNS+I GF HG+ +
Sbjct: 346 VKKDI----VSWNTMVAAYAQVGQMERALKVFKE--MGERNLVSWNSLISGFMLHGMYLD 399
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYAC--M 286
+L F M G KPD+ T+ LS+CA ++ + K+G ++ + C +
Sbjct: 400 ALWCFVLMQHEGKKPDQSTFACALSSCAIVAALQVGRQLHHLVIKSGYI--NDLFVCNAL 457
Query: 287 VDVMARAGQVAEA---YQFLCQIPIQPTASMLGAL-LNGC 322
+ + A+ G++ EA ++ +C + S++G LNGC
Sbjct: 458 ITMYAKCGKILEAKLVFKGICNADVVSWNSLIGGYALNGC 497
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 147/314 (46%), Gaps = 42/314 (13%)
Query: 40 GYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVF 99
Y+ D N++I YS +A+++F+ +PVKN+VSWNSML GY + G +S+A Q+F
Sbjct: 97 NYKKDAACWNAMISGYSREGRYDDAKRLFNEMPVKNIVSWNSMLAGYTQNGQMSLALQLF 156
Query: 100 DLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALD 159
M E+DV+SW+ ++DG+V GD D A F+++ P+PN V+ V++L A G L
Sbjct: 157 HEMLERDVVSWNLMVDGFVELGDLDSAWEFFKKV----PEPNIVSWVTMLYGFARKGKLL 212
Query: 160 KGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGG 219
+ R + D +V +++ Y + I EA +F M D W +MI G
Sbjct: 213 EARRL----FDQMPSKNVVSWNAMISAYVQSRQIDEAEKLFEE--MPKRDSVSWTTMING 266
Query: 220 FACHGLVKESLDLFSEMHIVGV---------------------------KPDEITYLNLL 252
+ G + E+ S++ + PD + + +L
Sbjct: 267 YVRAGKLDEARKTLSKLPYKNIAAQTAMISGYIKYNKIDEARQIFNEIGTPDMVCFNTML 326
Query: 253 SACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTA 312
+ G V EA + F+ + K + + MV A+ GQ+ A + ++ +
Sbjct: 327 AGYTQCGRVDEAIHLFEQMVKKDIVS----WNTMVAAYAQVGQMERALKVFKEMGERNLV 382
Query: 313 SMLGALLNGCMNHG 326
S +L++G M HG
Sbjct: 383 S-WNSLISGFMLHG 395
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 156/322 (48%), Gaps = 23/322 (7%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
NS+I Y+ + +AR +FD +P +NLVSWN+M+ GY + A ++F MP +D+
Sbjct: 10 NSMISAYAKNGRVIDARVLFDKMPCRNLVSWNTMIAGYLHNNKVDEAYELFVKMPRRDLF 69
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
SW+ +I Y + G ++A + + + K + +++ + G D + +
Sbjct: 70 SWTLMITCYTQNGMLEKAKQLLNSLPCN-YKKDAACWNAMISGYSREGRYDDAKRLF--- 125
Query: 169 IDNELPL-TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
NE+P+ +V S++ Y + G + AL +F M DV WN M+ GF G +
Sbjct: 126 --NEMPVKNIVSWNSMLAGYTQNGQMSLALQLFHE--MLERDVVSWNLMVDGFVELGDLD 181
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMV 287
+ + F ++ +P+ ++++ +L A G + EA FD + + + M+
Sbjct: 182 SAWEFFKKVP----EPNIVSWVTMLYGFARKGKLLEARRLFDQMPSKNVVS----WNAMI 233
Query: 288 DVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQD- 346
++ Q+ EA + ++P + + S ++NG + GKLD A RK + P+++
Sbjct: 234 SAYVQSRQIDEAEKLFEEMPKRDSVS-WTTMINGYVRAGKLDEA----RKTLSKLPYKNI 288
Query: 347 GRYVGLSNVYAIFRRWDKARSM 368
+ + Y + + D+AR +
Sbjct: 289 AAQTAMISGYIKYNKIDEARQI 310
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 142/298 (47%), Gaps = 29/298 (9%)
Query: 74 KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM 133
+N V++NSM+ YAK G + AR +FD MP ++++SW+ +I GY+ DEA +F +M
Sbjct: 4 RNTVTYNSMISAYAKNGRVIDARVLFDKMPCRNLVSWNTMIAGYLHNNKVDEAYELFVKM 63
Query: 134 RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL----VLRTSLVDMYAK 189
P+ + + ++ G L+K + + N LP +++ Y++
Sbjct: 64 ----PRRDLFSWTLMITCYTQNGMLEKAKQLL-----NSLPCNYKKDAACWNAMISGYSR 114
Query: 190 CGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYL 249
G +A +F M ++ WNSM+ G+ +G + +L LF EM ++ D +++
Sbjct: 115 EGRYDDAKRLFNE--MPVKNIVSWNSMLAGYTQNGQMSLALQLFHEM----LERDVVSWN 168
Query: 250 NLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ 309
++ G + AW FF K P + M+ AR G++ EA + Q+P +
Sbjct: 169 LMVDGFVELGDLDSAWEFF----KKVPEPNIVSWVTMLYGFARKGKLLEARRLFDQMPSK 224
Query: 310 PTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDG-RYVGLSNVYAIFRRWDKAR 366
S A+++ + ++D AE KL E P +D + + N Y + D+AR
Sbjct: 225 NVVS-WNAMISAYVQSRQIDEAE----KLFEEMPKRDSVSWTTMINGYVRAGKLDEAR 277
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 70/146 (47%), Gaps = 35/146 (23%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G PD TF + A + ++G +H + K+GY +D FV N+LI MY+ I A
Sbjct: 411 GKKPDQSTFACALSSCAIVAALQVGRQLHHLVIKSGYINDLFVCNALITMYAKCGKILEA 470
Query: 65 RKVFDGIPVKNLVSWNSMLDGYA--KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
+ VF GI ++VSWNS++ GYA CG
Sbjct: 471 KLVFKGICNADVVSWNSLIGGYALNGCG-------------------------------- 498
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSV 148
+EAL +FEEM+++G P++VT + V
Sbjct: 499 -EEALTLFEEMKLAGVVPDQVTFIGV 523
>30147.m013753 pentatricopeptide repeat-containing protein, putative
Length = 450
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 166/312 (53%), Gaps = 25/312 (8%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMY---SSFRD- 60
G+ P + T+P++ + + E G +H I K+G+ES+ V +SL +MY +F D
Sbjct: 102 GLKPHNYTYPYVLNSCCEMGIYEKGKRVHCQIIKSGFESNFAVGHSLFNMYIKMPAFTDT 161
Query: 61 -------IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCL 113
+ +ARK+FD + V+ + WN M+ Y G++ AR++F+ MPE+DV+SW+ +
Sbjct: 162 VFADNYEMIDARKIFDNMCVRPVEVWNKMVSQYVSFGNVRSARELFEAMPERDVVSWNSM 221
Query: 114 IDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL 173
I GYV+ G+ A +FE M P+ N ++ ++ G + R ++
Sbjct: 222 ISGYVKVGEVKNARELFEWM----PEKNVISWTLMIVLYGDTGDFETARRF----LEKMP 273
Query: 174 PLTLVLRTSLVDMYAKCGAIQEALHVF----RSGLMKPSDVFIWN-SMIGGFACHGLVKE 228
+V S++ Y K G EAL +F G++ F+ S A +G ++
Sbjct: 274 HRNVVSWNSMISSYTKFGKFIEALDLFVQMQSEGVIPDGYTFVSVLSACSNLAINGRTED 333
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMV 287
++ +F M +G+K ++ T+ + L AC+HGGL++E F + K+ ++ K EH+ C++
Sbjct: 334 AIKIFYLMQKLGLKLNDFTFTSALFACSHGGLLEEGRRIFYSMDKDYKISSKLEHFGCLI 393
Query: 288 DVMARAGQVAEA 299
D+++R G+V EA
Sbjct: 394 DLLSRNGKVEEA 405
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 103/219 (47%), Gaps = 21/219 (9%)
Query: 106 DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMH 165
+++ W+ +I GY G ++ A+++F+E+ G KP+ T VL +C +G +KG+ +H
Sbjct: 71 EIMLWNIMIRGYAFNGPFERAISMFDEIPQRGLKPHNYTYPYVLNSCCEMGIYEKGKRVH 130
Query: 166 HYVIDNELPLTLVLRTSLVDMYAKCGAIQ-----------EALHVFRSGLMKPSDVFIWN 214
+I + + SL +MY K A +A +F + ++P +V WN
Sbjct: 131 CQIIKSGFESNFAVGHSLFNMYIKMPAFTDTVFADNYEMIDARKIFDNMCVRPVEV--WN 188
Query: 215 SMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN 274
M+ + G V+ + +LF M + D +++ +++S G VK A F+ + +
Sbjct: 189 KMVSQYVSFGNVRSARELFEAMP----ERDVVSWNSMISGYVKVGEVKNARELFEWMPEK 244
Query: 275 GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTAS 313
+ + M+ + G A +FL ++P + S
Sbjct: 245 NVIS----WTLMIVLYGDTGDFETARRFLEKMPHRNVVS 279
>30190.m010934 pentatricopeptide repeat-containing protein, putative
Length = 413
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 138/264 (52%), Gaps = 40/264 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKA-SACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFR 59
MLR+GV P+ TFPFL K S C ++ IH ++ K G + D V N L+ +YS F
Sbjct: 140 MLRLGVCPNKYTFPFLLKGCSFCSIQS--CKQIHTHVLKFGSDLDLHVVNRLVRVYSIFS 197
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAK--CGDISMARQVFDLMPEQDVLSWSCLIDGY 117
D+ +A K+F P ++L W +M+ GYA+ C
Sbjct: 198 DLTDAWKLFGEFPERDLSIWTTMISGYAQNFCA--------------------------- 230
Query: 118 VRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
+EAL +FE M G +PN T+ SVL CA G+LD G +H ++I+ + + +
Sbjct: 231 ------NEALVLFERMVAEGFEPNGPTIASVLSVCARSGSLDLGERIHGFMIERGVEIGV 284
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
+L T+LV MYAK G I A +F S M +V WN+M+ G A HG +E+L LF ++
Sbjct: 285 ILGTALVHMYAKNGKILVARKLFDS--MTEKNVATWNAMLCGLASHGHAEEALSLFWKLE 342
Query: 238 IVGVKPDEITYLNLLSACAHGGLV 261
+ P + T++ +LSAC H GL+
Sbjct: 343 KEHIVPIDATFVGVLSACCHAGLI 366
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 115/248 (46%), Gaps = 4/248 (1%)
Query: 91 DISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLC 150
DI+ A ++F + + ++ W+ +I + D+AL + +M G PN+ T +L
Sbjct: 98 DINYAIKLFKSIQDPNIFMWNTIIRALANSSNPDQALFFYIQMLRLGVCPNKYTFPFLLK 157
Query: 151 ACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDV 210
C+ ++ + +H +V+ L L + LV +Y+ + +A +F G D+
Sbjct: 158 GCS-FCSIQSCKQIHTHVLKFGSDLDLHVVNRLVRVYSIFSDLTDAWKLF--GEFPERDL 214
Query: 211 FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDC 270
IW +MI G+A + E+L LF M G +P+ T ++LS CA G +
Sbjct: 215 SIWTTMISGYAQNFCANEALVLFERMVAEGFEPNGPTIASVLSVCARSGSLDLGERIHGF 274
Query: 271 LGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDL 330
+ + G+ +V + A+ G++ A + + + A+ A+L G +HG +
Sbjct: 275 MIERGVEIGVILGTALVHMYAKNGKILVARKLFDSMTEKNVATW-NAMLCGLASHGHAEE 333
Query: 331 AETVGRKL 338
A ++ KL
Sbjct: 334 ALSLFWKL 341
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 31/140 (22%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGY 86
+LG IHG++ + G E + +L+HMY
Sbjct: 266 DLGERIHGFMIERGVEIGVILGTALVHMY------------------------------- 294
Query: 87 AKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMV 146
AK G I +AR++FD M E++V +W+ ++ G G +EAL++F ++ P + T V
Sbjct: 295 AKNGKILVARKLFDSMTEKNVATWNAMLCGLASHGHAEEALSLFWKLEKEHIVPIDATFV 354
Query: 147 SVLCACAHLGALDKGRMMHH 166
VL AC H G +D GR + +
Sbjct: 355 GVLSACCHAGLIDVGRRIFY 374
>29615.m000493 pentatricopeptide repeat-containing protein, putative
Length = 501
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 34/290 (11%)
Query: 8 PDHLTFPFLAKA-SACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARK 66
PD TFP + KA +A L ++G +HG + G E+D FV N L+ Y
Sbjct: 142 PDGFTFPLVLKACTASLAFLDIGRRVHGQAFRHGLEADVFVQNGLVTFY----------- 190
Query: 67 VFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEA 126
AKC IS+A VF + ++ ++SW+ +I GY + G EA
Sbjct: 191 --------------------AKCRKISLANIVFGRLSDRSIVSWTSIISGYAQNGQPIEA 230
Query: 127 LAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDM 186
L +F +MR KP+++ +VSVL A + L+ G+ +H VI L + L SL M
Sbjct: 231 LRIFNQMREVNVKPDQIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLEFEIDLLISLTAM 290
Query: 187 YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
YAKCG + A F ++ ++ +WN+MI G+A +G +E+L+LF M + PD I
Sbjct: 291 YAKCGQVMFARLFFDQ--VRIPNLILWNAMISGYAKNGYAEEALELFRRMITMNFGPDSI 348
Query: 247 TYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQV 296
T +++ ACA G ++ A + D +G++ + + ++D+ ++ G V
Sbjct: 349 TITSVILACAQMGSLELARWMSDYIGRSEFRNDAFVSSALIDMFSKCGSV 398
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 119/241 (49%), Gaps = 33/241 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M V V PD + + +A + E G +IHG + K G E +
Sbjct: 237 MREVNVKPDQIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLEFE---------------- 280
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ L+S +M YAKCG + AR FD + +++ W+ +I GY +
Sbjct: 281 ------------IDLLISLTAM---YAKCGQVMFARLFFDQVRIPNLILWNAMISGYAKN 325
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +EAL +F M P+ +T+ SV+ ACA +G+L+ R M Y+ +E +
Sbjct: 326 GYAEEALELFRRMITMNFGPDSITITSVILACAQMGSLELARWMSDYIGRSEFRNDAFVS 385
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
++L+DM++KCG++ A VF L K DV +W+SMI G+ HG +ES++LF M G
Sbjct: 386 SALIDMFSKCGSVDLARDVFDRALDK--DVVLWSSMIMGYGLHGRGQESINLFEAMRQAG 443
Query: 241 V 241
+
Sbjct: 444 I 444
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 140/280 (50%), Gaps = 10/280 (3%)
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
+R ++G + LV+ + L G+I AR VFD P+ DV W+ +I Y R+ +
Sbjct: 72 SRLQYNGFLITKLVNCCATL------GEIRYARNVFDYYPDPDVFLWNAIIRCYTRQNLF 125
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCAC-AHLGALDKGRMMHHYVIDNELPLTLVLRTS 182
A+ ++ M+++ +P+ T VL AC A L LD GR +H + L + ++
Sbjct: 126 CNAIEMYARMQIACIRPDGFTFPLVLKACTASLAFLDIGRRVHGQAFRHGLEADVFVQNG 185
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
LV YAKC I A VF G + + W S+I G+A +G E+L +F++M V VK
Sbjct: 186 LVTFYAKCRKISLANIVF--GRLSDRSIVSWTSIISGYAQNGQPIEALRIFNQMREVNVK 243
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQF 302
PD+I +++L A ++ C+ K G+ + + + + A+ GQV A F
Sbjct: 244 PDQIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLEFEIDLLISLTAMYAKCGQVMFARLF 303
Query: 303 LCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELE 342
Q+ I P + A+++G +G + A + R++I +
Sbjct: 304 FDQVRI-PNLILWNAMISGYAKNGYAEEALELFRRMITMN 342
>29904.m003059 pentatricopeptide repeat-containing protein, putative
Length = 506
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 153/349 (43%), Gaps = 81/349 (23%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M GV PD T L+K + G IHG K G+ D V+NSL+ MY +
Sbjct: 119 MCSFGVLPDDYTLATLSKVCGEIGHLIAGKIIHGLSLKIGFVLDTVVANSLMSMYCKCGE 178
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPE---------------- 104
A K+FD +P +++ SWN ++ GY+ GD ++ +Q+ DL+ +
Sbjct: 179 FSEALKLFDEMPERSVGSWNVVIAGYSDSGDRNLNQQIVDLVKDMQIDGFKPNAFTVSSL 238
Query: 105 --------------------------------QDVLSWSCLIDGYVRKGDYDEALAVFEE 132
DV SCLID Y R ++ + +F++
Sbjct: 239 LVLCDGDIEKLDYGRELHGFIVRNELDLGCLGSDVHLGSCLIDMYSRINRVEKCMQLFDQ 298
Query: 133 MR--------------------------------VSGPKPNEVTMVSVLCACAHLGALDK 160
M+ G +PN VT+VSVL C+ L L
Sbjct: 299 MKRRNVYVWTAMINGYVQNGALEEALTLFHEMQAKDGVEPNRVTLVSVLPICSSLAGLPG 358
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
G+ +H Y I L L +L+DMY+KCG++ A VF +G + D W+S+I G+
Sbjct: 359 GKQIHGYAIRKRLNFDASLSNALIDMYSKCGSLNYARRVFDNGTFR-RDAISWSSIISGY 417
Query: 221 ACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD 269
HG +E++ L+ +M +G KPD+IT + ++SAC GLV E ++
Sbjct: 418 GLHGKGEEAVFLYDKMLQLGNKPDQITVIGVISACGRSGLVYEGLRIYN 466
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 131/268 (48%), Gaps = 24/268 (8%)
Query: 82 MLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN 141
++ YA CG + ++ VF+ + + V W+ LI GYV+ + E+ ++F +M G P+
Sbjct: 68 LISAYAICGVPTASKLVFNSLEVKSVPLWNSLISGYVKNQENTESFSLFCQMCSFGVLPD 127
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR 201
+ T+ ++ C +G L G+++H + L V+ SL+ MY KCG EAL +F
Sbjct: 128 DYTLATLSKVCGEIGHLIAGKIIHGLSLKIGFVLDTVVANSLMSMYCKCGEFSEALKLFD 187
Query: 202 SGLMKPSDVFIWNSMIGGFACHG---LVKESLDLFSEMHIVGVKPDEITYLNLLSAC--- 255
M V WN +I G++ G L ++ +DL +M I G KP+ T +LL C
Sbjct: 188 E--MPERSVGSWNVVIAGYSDSGDRNLNQQIVDLVKDMQIDGFKPNAFTVSSLLVLCDGD 245
Query: 256 ---------AHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
HG +V+ CLG + +C++D+ +R +V + Q Q+
Sbjct: 246 IEKLDYGRELHGFIVRNELD-LGCLGSD-----VHLGSCLIDMYSRINRVEKCMQLFDQM 299
Query: 307 PIQPTASMLGALLNGCMNHGKLDLAETV 334
+ + A++NG + +G L+ A T+
Sbjct: 300 K-RRNVYVWTAMINGYVQNGALEEALTL 326
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 82/143 (57%), Gaps = 7/143 (4%)
Query: 33 HGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSW-----NSMLDGYA 87
H K G E +R S++ + SS +P +++ G ++ +++ N+++D Y+
Sbjct: 328 HEMQAKDGVEPNRVTLVSVLPICSSLAGLPGGKQI-HGYAIRKRLNFDASLSNALIDMYS 386
Query: 88 KCGDISMARQVFDLMP-EQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMV 146
KCG ++ AR+VFD +D +SWS +I GY G +EA+ ++++M G KP+++T++
Sbjct: 387 KCGSLNYARRVFDNGTFRRDAISWSSIISGYGLHGKGEEAVFLYDKMLQLGNKPDQITVI 446
Query: 147 SVLCACAHLGALDKGRMMHHYVI 169
V+ AC G + +G +++ I
Sbjct: 447 GVISACGRSGLVYEGLRIYNSAI 469
>29912.m005452 pentatricopeptide repeat-containing protein, putative
Length = 352
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 128/261 (49%), Gaps = 35/261 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R GV PD T P + KA+ + E+G + + G ES+ + + I YS D
Sbjct: 114 MSRAGVLPDSYTLPIVLKAACQIFSIEIGKQLQSVAIRLGLESNEYCESGFISFYSKSGD 173
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I NA K+F+ P + L SWN+ +I G +
Sbjct: 174 IKNAYKMFEENPERKLGSWNA-------------------------------IIGGLSQG 202
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL--PLTLV 178
G EA+ +F EMR G P++VTMVSV+ AC LG L+ +H YV + ++
Sbjct: 203 GHAKEAIEIFIEMRKCGFVPDDVTMVSVISACGSLGDLNLAIQLHKYVFHANVFGRTNIL 262
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+ SL+DMY KCG + A VF + M +V W SMI G+ HG V E+++ F M
Sbjct: 263 VMNSLIDMYGKCGRMDLARRVFCT--MGEKNVSSWTSMIVGYGMHGHVNEAIEYFHCMRE 320
Query: 239 VGVKPDEITYLNLLSACAHGG 259
GV+P+ +T++ +LS C HGG
Sbjct: 321 AGVRPNHVTFIGVLSVCVHGG 341
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 107/228 (46%), Gaps = 13/228 (5%)
Query: 110 WSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI 169
W+ +I Y R +AL V+ M +G P+ T+ VL A + +++ G+ + I
Sbjct: 91 WNNIIRSYTRLDAPVKALQVYISMSRAGVLPDSYTLPIVLKAACQIFSIEIGKQLQSVAI 150
Query: 170 DNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKES 229
L + + Y+K G I+ A +F + + WN++IGG + G KE+
Sbjct: 151 RLGLESNEYCESGFISFYSKSGDIKNAYKMFEENPER--KLGSWNAIIGGLSQGGHAKEA 208
Query: 230 LDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW----YFF--DCLGKNGMTPKSEHY 283
+++F EM G PD++T ++++SAC G + A Y F + G+ + +
Sbjct: 209 IEIFIEMRKCGFVPDDVTMVSVISACGSLGDLNLAIQLHKYVFHANVFGRTNILVMNS-- 266
Query: 284 ACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
++D+ + G++ A + C + + S +++ G HG ++ A
Sbjct: 267 --LIDMYGKCGRMDLARRVFCTMG-EKNVSSWTSMIVGYGMHGHVNEA 311
>29929.m004593 pentatricopeptide repeat-containing protein, putative
Length = 832
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 145/281 (51%), Gaps = 41/281 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G+ + +TF +CL+ ELG IHG I + + F+ NSL
Sbjct: 505 MVESGLGFNSVTFSVALNLVSCLVNLELGKQIHGRILRLIIHDNGFIRNSL--------- 555
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ--------DVLSWSC 112
LD Y KCG + A ++F +P + +++SWS
Sbjct: 556 ----------------------LDMYCKCGKMEEASRMFRNVPVEISCDDPLGEIVSWSS 593
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
+I GYVR G+Y+ AL F M ++ T+ SV+ ACA+ G L+ GR +H +++
Sbjct: 594 MISGYVRNGEYEYALRTFISMVHEQVLVDKFTLTSVVSACANTGCLELGRQIHAHILKIG 653
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDL 232
+ L +SL+DMYAKCG++ +A +F+ +V +W SMI G A HG +E++ +
Sbjct: 654 HKVDAHLGSSLIDMYAKCGSLNDAQMIFKEN--DDPNVVLWTSMIFGCALHGQGREAVRV 711
Query: 233 FSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK 273
F M G+ P+EIT++++L+AC H GL++E +F+ + K
Sbjct: 712 FKCMMNEGITPNEITFISVLTACNHAGLLEEGCKYFELMPK 752
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 168/333 (50%), Gaps = 7/333 (2%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + GV P+ T + K + + + G IHG+I +G D + NS++ +Y
Sbjct: 373 MQKEGVCPNQFTLSSVLKCCSSICEIRNGKGIHGWILTSGIGFDIVLENSILDLYVKCGA 432
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
A+ +FD + K VSWN M+ GY + GD+ + ++F + +++ SW+ +IDG ++
Sbjct: 433 FDYAKSLFDSMAEKGTVSWNIMIGGYLRMGDVESSLELFQSLYFKNIASWNTIIDGLMKN 492
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G AL + +M SG N VT L + L L+ G+ +H ++ + +R
Sbjct: 493 GFETIALELLYKMVESGLGFNSVTFSVALNLVSCLVNLELGKQIHGRILRLIIHDNGFIR 552
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPS------DVFIWNSMIGGFACHGLVKESLDLFS 234
SL+DMY KCG ++EA +FR+ ++ S ++ W+SMI G+ +G + +L F
Sbjct: 553 NSLLDMYCKCGKMEEASRMFRNVPVEISCDDPLGEIVSWSSMISGYVRNGEYEYALRTFI 612
Query: 235 EMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAG 294
M V D+ T +++SACA+ G ++ + K G + + ++D+ A+ G
Sbjct: 613 SMVHEQVLVDKFTLTSVVSACANTGCLELGRQIHAHILKIGHKVDAHLGSSLIDMYAKCG 672
Query: 295 QVAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
+ +A Q + + P + +++ GC HG+
Sbjct: 673 SLNDA-QMIFKENDDPNVVLWTSMIFGCALHGQ 704
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 92/164 (56%), Gaps = 3/164 (1%)
Query: 75 NLVSWNSMLDGYAK-CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM 133
NL N +LD YAK ++S A ++FD + +DV +W+ LI G+ + ++ +F M
Sbjct: 314 NLGITNHLLDLYAKNSQNLSHAHKLFDEILCRDVRTWTILISGFAQTRNFKMVSGLFRRM 373
Query: 134 RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI 193
+ G PN+ T+ SVL C+ + + G+ +H +++ + + +VL S++D+Y KCGA
Sbjct: 374 QKEGVCPNQFTLSSVLKCCSSICEIRNGKGIHGWILTSGIGFDIVLENSILDLYVKCGAF 433
Query: 194 QEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
A +F S M WN MIGG+ G V+ SL+LF ++
Sbjct: 434 DYAKSLFDS--MAEKGTVSWNIMIGGYLRMGDVESSLELFQSLY 475
>30098.m001706 pentatricopeptide repeat-containing protein, putative
Length = 758
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 146/291 (50%), Gaps = 9/291 (3%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+L+ G+ PD T + A A G IH Y +S+ FV +LI MYS +D
Sbjct: 274 LLKEGIEPDSFTLGSVLTACADTASLRQGKEIHSYAIVKSLQSNTFVGGALIEMYSKCQD 333
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDG 116
A+ VF+ + ++ +WN ++ YA+C R + M E ++ +W+ ++ G
Sbjct: 334 PMAAQLVFNEVIERDAPTWNVLISCYARCNQNEEIRNLLQKMQEDGFEPNIYTWNGILAG 393
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
YV G D A+ +F EM +P+ T+ +L AC+ L L++G+ +H + I
Sbjct: 394 YVENGHLDLAMQLFSEMHTGDVRPDIFTVGIILPACSKLATLERGKQVHAHSIRCYYDSD 453
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
+ + LVDMYAKCG++Q A + + ++ N M+ +A HG +E + LF +
Sbjct: 454 VHIGAGLVDMYAKCGSLQYAQLAYSR--ISNHNLVCHNVMLTAYAMHGYGEEGIALFRTI 511
Query: 237 HIVGVKPDEITYLNLLSACAHGGLV--KEAWYFFDCLGKN-GMTPKSEHYA 284
G +PD +T+L++L++C H GLV + W + L + K HY+
Sbjct: 512 RATGFQPDNVTFLSVLASCVHAGLVEHENTWILYHFLRPDKTFNNKRPHYS 562
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 132/285 (46%), Gaps = 55/285 (19%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
+ FP + K + L ELG +H + K D+ NA K+F
Sbjct: 164 EFFAFPLVFKICSGLGMVELGRQLHAMVMK------------------RCGDMDNAVKIF 205
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSCLIDGYVRKGDYD 124
++N VS+N+M+ GY GD+S A++ FD M +++ +SW+ +I GYV +D
Sbjct: 206 SRFSLRNEVSYNTMIVGYCAIGDVSKAKEFFDQMEVSGVKRERISWNSMISGYVDNFMFD 265
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
EAL +F + G +P+ T+ SVL ACA +L +G+ +H Y I L + +L+
Sbjct: 266 EALNMFRNLLKEGIEPDSFTLGSVLTACADTASLRQGKEIHSYAIVKSLQSNTFVGGALI 325
Query: 185 DMYAKCGAIQEALHVF---------------------------RSGLMK------PSDVF 211
+MY+KC A VF R+ L K +++
Sbjct: 326 EMYSKCQDPMAAQLVFNEVIERDAPTWNVLISCYARCNQNEEIRNLLQKMQEDGFEPNIY 385
Query: 212 IWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
WN ++ G+ +G + ++ LFSEMH V+PD T +L AC+
Sbjct: 386 TWNGILAGYVENGHLDLAMQLFSEMHTGDVRPDIFTVGIILPACS 430
>29763.m000190 pentatricopeptide repeat-containing protein, putative
Length = 392
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 138/250 (55%), Gaps = 23/250 (9%)
Query: 12 TFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGI 71
TF L K CL L +H I K GY+SD ++++S+I MYS + AR+VFD
Sbjct: 113 TFTSLLKCCFCL---SLLDQVHCQILKYGYKSDVYINSSVISMYSKHGAVEYARQVFDES 169
Query: 72 PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFE 131
N+V W S++ G G I AR++FD MPE++ +S+S ++ G+VR G ++EA+A+F
Sbjct: 170 SDTNVVCWTSLISGCCINGLIDEAREMFDRMPERNEVSYSAMVSGFVRNGFFNEAIALFR 229
Query: 132 EMRVSGP-KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
E+++ G + N +VSVL ACA +GA G+ +H Y + L +VD++++
Sbjct: 230 ELKICGNVRFNASLLVSVLNACAAIGAFQDGKCIHSYADMHGFSCEL----QIVDLFSR- 284
Query: 191 GAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLN 250
M+ DV W++MI G A +G + LF+EM G K + +T++
Sbjct: 285 --------------MQYKDVTTWSAMILGLAINGENHRGIGLFAEMERKGPKANAVTFMG 330
Query: 251 LLSACAHGGL 260
+L+AC H L
Sbjct: 331 VLTACNHKTL 340
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 87/179 (48%), Gaps = 9/179 (5%)
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
GDI+ A+ VF+ MP ++ +I G+ + + +++F M + N T S+L
Sbjct: 59 GDINYAQAVFNQMPLPSSFDFNSMILGFSQNSLSQKGISLFARMNSIRIETNTHTFTSLL 118
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
C L LD+ +H ++ + + +S++ MY+K GA++ A VF ++
Sbjct: 119 KCCFCLSLLDQ---VHCQILKYGYKSDVYINSSVISMYSKHGAVEYARQVFDES--SDTN 173
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFF 268
V W S+I G +GL+ E+ ++F M + +E++Y ++S G EA F
Sbjct: 174 VVCWTSLISGCCINGLIDEAREMFDRMP----ERNEVSYSAMVSGFVRNGFFNEAIALF 228
>30059.m000463 pentatricopeptide repeat-containing protein, putative
Length = 341
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 125/236 (52%), Gaps = 33/236 (13%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD T+PFL KA + ++ +G IH + G+ES FV NSL+HMY
Sbjct: 138 PDTHTYPFLLKAVSKMVNVRVGEKIHSISIRNGFESLVFVQNSLMHMY------------ 185
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
A CG A ++F+ MP++D+++W+ I G+ G +EAL
Sbjct: 186 -------------------AACGQYESAHKLFEFMPDRDLVAWNTAISGFALNGKPNEAL 226
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
++ EM + G +P+ T+VS+L ACA LGAL GR +H Y++ L L SL+D+Y
Sbjct: 227 KLYMEMGLEGVEPDGFTLVSLLSACAELGALALGRRIHAYMVKVGLDENLHANNSLIDLY 286
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
AKCG I++A VF M+ +V W S+I G A +G E+++ F EM G+ P
Sbjct: 287 AKCGRIRDAQQVFDE--MELRNVVSWTSLIVGLAVNGFGMEAIEHFKEMEKQGLVP 340
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 116/234 (49%), Gaps = 6/234 (2%)
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
++ A +F L+ ++ +W+ +I G+ + A+ ++ + + +P+ T +L A
Sbjct: 90 MTYAHNIFTLIQNPNIFTWNTMIRGHAESENPKPAIELYHRLHFNSIEPDTHTYPFLLKA 149
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVF 211
+ + + G +H I N + ++ SL+ MYA CG + A +F M D+
Sbjct: 150 VSKMVNVRVGEKIHSISIRNGFESLVFVQNSLMHMYAACGQYESAHKLFE--FMPDRDLV 207
Query: 212 IWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL 271
WN+ I GFA +G E+L L+ EM + GV+PD T ++LLSACA G + +
Sbjct: 208 AWNTAISGFALNGKPNEALKLYMEMGLEGVEPDGFTLVSLLSACAELGALALGRRIHAYM 267
Query: 272 GKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTAS----MLGALLNG 321
K G+ ++D+ A+ G++ +A Q ++ ++ S ++G +NG
Sbjct: 268 VKVGLDENLHANNSLIDLYAKCGRIRDAQQVFDEMELRNVVSWTSLIVGLAVNG 321
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
GV PD T L A A L LG IH Y+ K G + + +NSLI +Y+ I +A
Sbjct: 236 GVEPDGFTLVSLLSACAELGALALGRRIHAYMVKVGLDENLHANNSLIDLYAKCGRIRDA 295
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
++VFD + ++N+VSW S++ G A G A + F M +Q ++
Sbjct: 296 QQVFDEMELRNVVSWTSLIVGLAVNGFGMEAIEHFKEMEKQGLV 339
>30147.m014125 pentatricopeptide repeat-containing protein, putative
Length = 954
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 144/279 (51%), Gaps = 34/279 (12%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD TF + A++ + + G IHGY +A + V +L++MYS
Sbjct: 550 PDQTTFSAILSAASSIHSLQKGKEIHGYAYRARLGDEALVGGALVNMYS----------- 598
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
KCG + AR++FDL+ +D +S S L+ GY + G +EAL
Sbjct: 599 --------------------KCGALESARKMFDLLAVKDQVSCSSLVSGYAQNGWLEEAL 638
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+F EM +S + + SVL A A L LD G +H +++ L + + +SLV +Y
Sbjct: 639 LLFHEMLISNFTIDSFAVSSVLGAIAGLNRLDFGTQLHAHLVKLGLDSDVSVGSSLVTVY 698
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
+KCG+I++ F + +D+ W +MI A HG E+L ++ +M G++PD +T
Sbjct: 699 SKCGSIEDCWKAFNQ--IDDADLISWTTMIASCAQHGKGVEALKIYEQMRREGIRPDSVT 756
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYAC 285
++ +LSAC+H LV+E ++ F+ + K+ G+ P + AC
Sbjct: 757 FVGVLSACSHANLVEEGYFHFNSMTKDFGLEPNNLDCAC 795
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 162/348 (46%), Gaps = 41/348 (11%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R V P+ TF + A A L + ELG I G++ K
Sbjct: 243 MSRRFVVPNSFTFSSILTACASLEEVELGKGIQGWVIKCC-------------------- 282
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
A+ +F G + N+ YAKCGDI A + F MP ++V+SW+ ++ G++++
Sbjct: 283 ---AKDIFVGTAIVNM---------YAKCGDIVDAVKEFSRMPVRNVVSWTAIVSGFIKR 330
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
D AL F+EMR + N+ T+ +V+ ACA + + +H +++ L V+
Sbjct: 331 DDSISALKFFKEMRKMKEETNKFTVTTVISACAKPHFIKEAIQIHCWILKTGYYLDPVVG 390
Query: 181 TSLVDMYAKCGAIQEALHVFR--SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+L++MYAK AI + VFR G+ P IW MI FA + + ++DL ++
Sbjct: 391 AALINMYAKLHAISSSEMVFREMEGVKNPG---IWTIMISSFAKNQDSQSAIDLLLKLLQ 447
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAE 298
G++PD+ ++LS L +E + + K G + + + ++ G + +
Sbjct: 448 QGLRPDKFCLSSVLSVIDSLYLGREIHCY---ILKTGFVLDLSVGSSLFTMYSKCGSIGD 504
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQD 346
+Y+ QIP++ S ++++G HG A + RK++ D
Sbjct: 505 SYKVFEQIPVKDNISWT-SMISGFTEHGHAYQAFELLRKMLTERSKPD 551
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 122/244 (50%), Gaps = 13/244 (5%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
N V NS+LD Y K G + A +VFD +P ++V+SW+ +I GY R ++++ F M
Sbjct: 84 NTVVANSLLDWYCKSGALFYALKVFDTIPNKNVISWNVIISGYNRNSLFEDSWRFFSMMH 143
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
SG PN++T VL ACA L + G ++ N +R ++D+ A+ G
Sbjct: 144 FSGFDPNDITYGCVLSACAALETPNLGEQVYSLATKNGFYSNGHVRAGMIDLLARNGRFG 203
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
+AL VF + +V WNS+I G G +LD+F +M V P+ T+ ++L+A
Sbjct: 204 DALRVFYD--VSCENVVCWNSIISGAVKSGEYWIALDIFYQMSRRFVVPNSFTFSSILTA 261
Query: 255 CAHGGLVK-----EAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ 309
CA V+ + W C K+ + +V++ A+ G + +A + ++P++
Sbjct: 262 CASLEEVELGKGIQGW-VIKCCAKDIFVGTA-----IVNMYAKCGDIVDAVKEFSRMPVR 315
Query: 310 PTAS 313
S
Sbjct: 316 NVVS 319
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 135/300 (45%), Gaps = 34/300 (11%)
Query: 28 LGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYA 87
LG IH YI K G+ D V +SL MYS
Sbjct: 469 LGREIHCYILKTGFVLDLSVGSSLFTMYS------------------------------- 497
Query: 88 KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
KCG I + +VF+ +P +D +SW+ +I G+ G +A + +M KP++ T +
Sbjct: 498 KCGSIGDSYKVFEQIPVKDNISWTSMISGFTEHGHAYQAFELLRKMLTERSKPDQTTFSA 557
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP 207
+L A + + +L KG+ +H Y L ++ +LV+MY+KCGA++ A +F L+
Sbjct: 558 ILSAASSIHSLQKGKEIHGYAYRARLGDEALVGGALVNMYSKCGALESARKMF--DLLAV 615
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYF 267
D +S++ G+A +G ++E+L LF EM I D ++L A A +
Sbjct: 616 KDQVSCSSLVSGYAQNGWLEEALLLFHEMLISNFTIDSFAVSSVLGAIAGLNRLDFGTQL 675
Query: 268 FDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
L K G+ + +V V ++ G + + ++ QI S ++ C HGK
Sbjct: 676 HAHLVKLGLDSDVSVGSSLVTVYSKCGSIEDCWKAFNQIDDADLISWT-TMIASCAQHGK 734
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 117/260 (45%), Gaps = 34/260 (13%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G P+ +T+ + A A L LG ++ TK G+ S+ V +I + + +A
Sbjct: 146 GFDPNDITYGCVLSACAALETPNLGEQVYSLATKNGFYSNGHVRAGMIDLLARNGRFGDA 205
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
+VF + +N+V WNS++ G V+ G+Y
Sbjct: 206 LRVFYDVSCENVVCWNSIISG-------------------------------AVKSGEYW 234
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
AL +F +M PN T S+L ACA L ++ G+ + +VI + + T++V
Sbjct: 235 IALDIFYQMSRRFVVPNSFTFSSILTACASLEEVELGKGIQGWVIKC-CAKDIFVGTAIV 293
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
+MYAKCG I +A+ F M +V W +++ GF +L F EM + + +
Sbjct: 294 NMYAKCGDIVDAVKEFSR--MPVRNVVSWTAIVSGFIKRDDSISALKFFKEMRKMKEETN 351
Query: 245 EITYLNLLSACAHGGLVKEA 264
+ T ++SACA +KEA
Sbjct: 352 KFTVTTVISACAKPHFIKEA 371
>30128.m008934 pentatricopeptide repeat-containing protein, putative
Length = 387
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 112/184 (60%), Gaps = 3/184 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
NS+LD Y +CG + A Q F M +D+++W+ +I GY R D EAL +F EM+++G
Sbjct: 201 NSILDMYCRCGRLPEANQYFHEMTRRDLITWNTIIAGYERS-DSIEALFIFSEMKLNGFD 259
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
P+ T SV ACA+L L G+ +H +I L L+L +L+DMYAKCG I ++ +
Sbjct: 260 PDCNTFTSVTAACANLAVLSCGQQVHGGIIQKGLDKDLILANALIDMYAKCGIITDSRKI 319
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F + ++ W SM+ G+ HG +E ++LF EM G+KPD I ++ +LSAC+H G
Sbjct: 320 FSE--LSCKNLVSWTSMMIGYGAHGFGREVVELFDEMVESGIKPDHIAFMAVLSACSHAG 377
Query: 260 LVKE 263
LV +
Sbjct: 378 LVDQ 381
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 155/347 (44%), Gaps = 67/347 (19%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P+ T + KA + G +HG+ K G E FV N+L
Sbjct: 58 PNAFTISSVLKACKGMKSLSCGTLVHGFAIKHGIEGSIFVDNAL---------------- 101
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISM--ARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
+D YA C +SM A VF + ++ +SW+ LI GY KGD
Sbjct: 102 ---------------MDAYATCC-VSMREACLVFCGIEVKNAVSWTTLIAGYTHKGDGHL 145
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
L +F +M + + N + + ACA +G+ + G+ +H VI + +L + S++D
Sbjct: 146 GLQIFRQMLLEEEECNPYSFSIAVRACASIGSHNFGKQIHAAVIKHGCEFSLPVMNSILD 205
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MY +CG + EA F M D+ WN++I G+ + E+L +FSEM + G PD
Sbjct: 206 MYCRCGRLPEANQYFHE--MTRRDLITWNTIIAGYERSDSI-EALFIFSEMKLNGFDPDC 262
Query: 246 ITYLNLLSACA-----------HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAG 294
T+ ++ +ACA HGG++++ L K+ + + ++D+ A+ G
Sbjct: 263 NTFTSVTAACANLAVLSCGQQVHGGIIQKG------LDKDLILANA-----LIDMYAKCG 311
Query: 295 QVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIEL 341
+ ++ + ++ + S ++ G HG GR+++EL
Sbjct: 312 IITDSRKIFSELSCKNLVSWTSMMI-GYGAHG-------FGREVVEL 350
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 110/222 (49%), Gaps = 3/222 (1%)
Query: 83 LDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNE 142
+ Y + G + AR VFD M E+DV++W+ +I GY ++ A ++F +M S PN
Sbjct: 1 MKSYFEKGLVREARNVFDEMLERDVVAWTVMIAGYASCNEHAYAWSMFCDMVASEMNPNA 60
Query: 143 VTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG-AIQEALHVFR 201
T+ SVL AC + +L G ++H + I + + ++ + +L+D YA C +++EA VF
Sbjct: 61 FTISSVLKACKGMKSLSCGTLVHGFAIKHGIEGSIFVDNALMDAYATCCVSMREACLVFC 120
Query: 202 SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
++ + W ++I G+ G L +F +M + + + ++ + ACA G
Sbjct: 121 G--IEVKNAVSWTTLIAGYTHKGDGHLGLQIFRQMLLEEEECNPYSFSIAVRACASIGSH 178
Query: 262 KEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
+ K+G ++D+ R G++ EA Q+
Sbjct: 179 NFGKQIHAAVIKHGCEFSLPVMNSILDMYCRCGRLPEANQYF 220
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 31/157 (19%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G PD TF + A A L G +HG I + G + D ++N+LI M
Sbjct: 257 GFDPDCNTFTSVTAACANLAVLSCGQQVHGGIIQKGLDKDLILANALIDM---------- 306
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
YAKCG I+ +R++F + ++++SW+ ++ GY G
Sbjct: 307 ---------------------YAKCGIITDSRKIFSELSCKNLVSWTSMMIGYGAHGFGR 345
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
E + +F+EM SG KP+ + ++VL AC+H G +D+G
Sbjct: 346 EVVELFDEMVESGIKPDHIAFMAVLSACSHAGLVDQG 382
>29851.m002437 pentatricopeptide repeat-containing protein, putative
Length = 1157
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 147/262 (56%), Gaps = 3/262 (1%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ GV + TF L A + L +LG IH + K G +S+ ++ + +I +Y +
Sbjct: 722 MMDNGVMWNEHTFASLLSACSGLRNLKLGKEIHACVLKNGMDSNPYIESGIIDVYCKCGN 781
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A ++ G + + S +SM+ GY+ G+++ AR++FD + E++ + W+ L GYV+
Sbjct: 782 VKYAESIYLGSRIGSPFSTSSMIVGYSLQGNMAEARRLFDSLEEKNAIVWTALFTGYVKL 841
Query: 121 GDYDEALAVFEEMRVSGPK-PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
+ +F E R P+ + ++SVL ACA AL G+ +H YV + + +
Sbjct: 842 QHCEAIFELFSEFRSKEAMVPDSLILISVLGACALEAALSPGKQIHGYVFRMGITMDKKM 901
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
T++VDMY+K G+ A VF++ + D ++N M+ G+A +G E++ LF EM
Sbjct: 902 STAMVDMYSKSGSTAYAEKVFQN--VNERDSILYNVMMAGYAHNGHEIEAIQLFQEMLEK 959
Query: 240 GVKPDEITYLNLLSACAHGGLV 261
GV+P+ +T++ LLSAC H GLV
Sbjct: 960 GVRPNVVTFVALLSACRHCGLV 981
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 173/365 (47%), Gaps = 40/365 (10%)
Query: 46 FVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ 105
F SN LIH+YS AR +FD +P KN+ SWN+++ + + +++ A+ +FD +
Sbjct: 498 FTSNKLIHLYSKHGLAREARNLFDEMPEKNVFSWNAIISAHIRTHNLTQAKAIFDSASVR 557
Query: 106 DVLSWSCLIDGYVR-KGDYDEALAVFEEMRVSGPKP--NEVTMVSVLCACAHLGALDKGR 162
D+++++ ++ GYVR G AL +F+EM + K +E ++ +++ A L L GR
Sbjct: 558 DLVTYNLMLSGYVRVDGCESYALDLFKEMPRNRSKVGIDEFSLTTMVKLFAKLSMLCHGR 617
Query: 163 MMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF--------------------RS 202
+H Y++ + +SL+DMY+KCG + AL VF R
Sbjct: 618 QVHSYMVKTANDKSGFAVSSLIDMYSKCGCFKAALEVFKGCERVVDLVSKNAMVAACCRE 677
Query: 203 GLM-----------KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
G M + +D WN++I G+ +G ES F M GV +E T+ +L
Sbjct: 678 GEMDLALKLFWRENELNDTVSWNTLISGYVQNGYAVESFKSFVRMMDNGVMWNEHTFASL 737
Query: 252 LSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQV--AEAYQFLCQI--P 307
LSAC+ +K C+ KNGM + ++DV + G V AE+ +I P
Sbjct: 738 LSACSGLRNLKLGKEIHACVLKNGMDSNPYIESGIIDVYCKCGNVKYAESIYLGSRIGSP 797
Query: 308 IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARS 367
++ ++G L G M + + I G YV L + AIF + + RS
Sbjct: 798 FSTSSMIVGYSLQGNMAEARRLFDSLEEKNAIVWTALFTG-YVKLQHCEAIFELFSEFRS 856
Query: 368 MREAM 372
+EAM
Sbjct: 857 -KEAM 860
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 146/331 (44%), Gaps = 38/331 (11%)
Query: 3 RVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIP 62
+VG+ D + + K A L G +H Y+ K + F +SLI MYS
Sbjct: 592 KVGI--DEFSLTTMVKLFAKLSMLCHGRQVHSYMVKTANDKSGFAVSSLIDMYSKCGCFK 649
Query: 63 NARKVFDGIP-VKNLVSWNSMLDGYAKCGDISMARQVFDLMPE-QDVLSWSCLIDGYVRK 120
A +VF G V +LVS N+M+ + G++ +A ++F E D +SW+ LI GYV+
Sbjct: 650 AALEVFKGCERVVDLVSKNAMVAACCREGEMDLALKLFWRENELNDTVSWNTLISGYVQN 709
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G E+ F M +G NE T S+L AC+ L L G+ +H V+ N + +
Sbjct: 710 GYAVESFKSFVRMMDNGVMWNEHTFASLLSACSGLRNLKLGKEIHACVLKNGMDSNPYIE 769
Query: 181 TSLVDMYAKCGAIQ-------------------------------EALHVFRSGLMKPSD 209
+ ++D+Y KCG ++ EA +F S ++ +
Sbjct: 770 SGIIDVYCKCGNVKYAESIYLGSRIGSPFSTSSMIVGYSLQGNMAEARRLFDS--LEEKN 827
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIV-GVKPDEITYLNLLSACAHGGLVKEAWYFF 268
+W ++ G+ + +LFSE + PD + +++L ACA +
Sbjct: 828 AIVWTALFTGYVKLQHCEAIFELFSEFRSKEAMVPDSLILISVLGACALEAALSPGKQIH 887
Query: 269 DCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
+ + G+T + MVD+ +++G A A
Sbjct: 888 GYVFRMGITMDKKMSTAMVDMYSKSGSTAYA 918
>28644.m000920 pentatricopeptide repeat-containing protein, putative
Length = 412
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 145/296 (48%), Gaps = 38/296 (12%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D LT F+ KA A L +H + + G+ +D + +L
Sbjct: 98 DALTCTFVLKACARALACSESTQLHSHTVRKGFAADALLGTTL----------------- 140
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
LD YAK G++ A++VFD M + SW+ LI G+ + EAL
Sbjct: 141 --------------LDLYAKIGNLDSAQKVFDEMLVKVTASWTALIFGFAQGNKPSEALG 186
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
+F+ M V G KP+E T+++ LCAC+ LGA +G +H ++ + +L L + + +L+DMYA
Sbjct: 187 LFKRMEVLGLKPDETTLLAALCACSQLGASKEGEKIHEFIKNQKLDLNVRVCNALIDMYA 246
Query: 189 KCGAIQEALHVFRSGLMKPSDVFI-WNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
KCG+ +A VF S + P+ + WN+M+ FA HG ++L LF M G+ PD +
Sbjct: 247 KCGSADKAYLVFES--LGPNKTLVNWNTMVMAFAMHGDGVKALGLFKHMGQEGLIPDAKS 304
Query: 248 YLNLLSACAHGGL---VKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
YL +L AC + G VKE W D L + MT + V + G + + Y
Sbjct: 305 YLAVLCACNYSGSVEEVKERWTSVDWL-RETMTNRDVEKVVGVSYIEEKGVIRKFY 359
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 162/376 (43%), Gaps = 26/376 (6%)
Query: 78 SWNSMLDGYA-KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVS 136
S + +L YA ++S+A + F + W+ ++ ++ ++ + M
Sbjct: 34 SRSKLLQLYALSLNNLSVAIKTFYQIVTPSTADWNAILRALIQSTHPIDSFRWYRNMIRG 93
Query: 137 GPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEA 196
K + +T VL ACA A + +H + + +L T+L+D+YAK G + A
Sbjct: 94 LYKVDALTCTFVLKACARALACSESTQLHSHTVRKGFAADALLGTTLLDLYAKIGNLDSA 153
Query: 197 LHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
VF L+K + W ++I GFA E+L LF M ++G+KPDE T L L AC+
Sbjct: 154 QKVFDEMLVKVTAS--WTALIFGFAQGNKPSEALGLFKRMEVLGLKPDETTLLAALCACS 211
Query: 257 HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLG 316
G KE + + + ++D+ A+ G +AY + T
Sbjct: 212 QLGASKEGEKIHEFIKNQKLDLNVRVCNALIDMYAKCGSADKAYLVFESLGPNKTLVNWN 271
Query: 317 ALLNGCMNHGKLDLAETVGRKLIELEPH--QDG------RYVGL-------SNVYAIFRR 361
++ HG G K + L H Q+G Y+ + +V + R
Sbjct: 272 TMVMAFAMHGD-------GVKALGLFKHMGQEGLIPDAKSYLAVLCACNYSGSVEEVKER 324
Query: 362 WDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKH 421
W +RE M V+K G S++E G + +F DKSH S +IY L I ++K
Sbjct: 325 WTSVDWLRETMTNRDVEKVVGVSYIEEKGVIRKFYDGDKSHKSWRKIYAKLREIRFKIKD 384
Query: 422 IVDYENQEYYFYDNEG 437
+ +N+++ F + G
Sbjct: 385 -REEDNRKHKFKNYLG 399
>29686.m000882 pentatricopeptide repeat-containing protein, putative
Length = 563
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 111/185 (60%), Gaps = 2/185 (1%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
N+ NS++ Y+KC + A +F+ + + ++SW+ +I GY + G +EAL F EM+
Sbjct: 378 NVSVMNSLISMYSKCKQVDFAANLFENLQNRTLVSWNAMILGYAQNGRLNEALNFFCEMQ 437
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
KP+ TMVSV+ A A L + + +H VI L T+ + T+LVDMYAKCGAI
Sbjct: 438 SQNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRLLDDTVFVMTALVDMYAKCGAIH 497
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
A +F +M V WNSMI + HGL KE++ LF EM +KP+++T+L +LSA
Sbjct: 498 TARKLF--NMMSERHVITWNSMIDAYGTHGLGKEAVQLFVEMQKGTIKPNDVTFLCVLSA 555
Query: 255 CAHGG 259
C+H G
Sbjct: 556 CSHSG 560
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 147/296 (49%), Gaps = 33/296 (11%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD +T + A A + G AIH Y+ +AG++ +S +L+ MYS
Sbjct: 241 PDSVTIVSVLPAVADIRSLRFGKAIHAYVIRAGFDWLVNISTALVDMYS----------- 289
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
KC + AR +FD M + V++W+ +I G V GD +EA
Sbjct: 290 --------------------KCDSLGTARVIFDGMGSRTVVTWNSMIAGCVENGDPEEAK 329
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+F++M G +P +VT++ VL ACA G L++G+ +H V D +L + + SL+ MY
Sbjct: 330 VLFKKMMDEGLQPTDVTVMEVLHACADSGDLEQGKFVHKLVEDLKLDSNVSVMNSLISMY 389
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
+KC + A ++F + ++ + WN+MI G+A +G + E+L+ F EM +KPD T
Sbjct: 390 SKCKQVDFAANLFEN--LQNRTLVSWNAMILGYAQNGRLNEALNFFCEMQSQNIKPDSFT 447
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
++++ A A + ++A + + + + +VD+ A+ G + A +
Sbjct: 448 MVSVIPALAELSIPRQAKWIHGLVIRRLLDDTVFVMTALVDMYAKCGAIHTARKLF 503
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 109/192 (56%), Gaps = 2/192 (1%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
NL + +++ Y KC I A ++FD M E+D++ W+ +I GY + G AL + ++
Sbjct: 176 NLFAMTAVVSLYCKCRVIGDAYKMFDRMTERDLVCWNTIISGYAQNGLTKVALELVPKIF 235
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
G +P+ VT+VSVL A A + +L G+ +H YVI + + T+LVDMY+KC ++
Sbjct: 236 EEGHRPDSVTIVSVLPAVADIRSLRFGKAIHAYVIRAGFDWLVNISTALVDMYSKCDSLG 295
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
A +F M V WNSMI G +G +E+ LF +M G++P ++T + +L A
Sbjct: 296 TARVIFDG--MGSRTVVTWNSMIAGCVENGDPEEAKVLFKKMMDEGLQPTDVTVMEVLHA 353
Query: 255 CAHGGLVKEAWY 266
CA G +++ +
Sbjct: 354 CADSGDLEQGKF 365
>30170.m014105 pentatricopeptide repeat-containing protein, putative
Length = 1218
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 135/288 (46%), Gaps = 42/288 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ V P+ +T A A L GL IH K G+ D V NSLI MYS
Sbjct: 336 MILARVEPNGVTISSAVSACASLKVLNEGLEIHALAVKLGFVEDVLVGNSLIDMYSKCGK 395
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCG------------------------------ 90
+ NA KVFD +P K++ +WNSM+ GY + G
Sbjct: 396 LENAWKVFDMMPEKDVYTWNSMIGGYCQVGYCGKAHMLFMKMQKSETQPNAITWNNMIWG 455
Query: 91 -----DISMARQVFDLMPE-----QDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKP 140
D A +F M E +D SW+ LI GY++ G D+AL++F +M+
Sbjct: 456 YIHNGDEDQAMDLFRRMEEDGKIKRDTASWNSLISGYLQIGQKDKALSIFRQMQSFSINI 515
Query: 141 NEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF 200
N VT++SVL ACA+L AL + +H VI L L + SL+D YAK G I + +F
Sbjct: 516 NSVTILSVLPACANLIALKMVKEIHGCVIRRNLDSLLPITNSLIDTYAKSGNIGYSRTIF 575
Query: 201 RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
L K D WNS+I G+ G +L L +M +G+KP+ T+
Sbjct: 576 DRALFK--DFITWNSLIAGYVLFGCSDAALGLVDQMKKLGIKPNRSTF 621
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 167/367 (45%), Gaps = 45/367 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ PD P + +A + G +H K G + FV+NS++ +Y+
Sbjct: 165 MMEENCLPDAFLLPKILQACGNSRDIKSGEMVHSLAIKCGVDGYPFVNNSILAVYAKCGK 224
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDV----LSWSCLIDG 116
+ A K F+ + +WN+++ GY + G I A+++FD M E+ + +SW+ LI G
Sbjct: 225 LSLASKCFEMMDKSETAAWNALISGYCQHGQIEEAQRLFDAMREEGIEPGLVSWNILIAG 284
Query: 117 YVRKGDYDEALAVFEEMRVSGP-----------------------------------KPN 141
Y + G +D A+ + ++M V G +PN
Sbjct: 285 YNQLGYFDIAMELMKKMEVLGTSPDVVTWTSMISGLAQNDKASKALHLFNDMILARVEPN 344
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR 201
VT+ S + ACA L L++G +H + +++ SL+DMY+KCG ++ A VF
Sbjct: 345 GVTISSAVSACASLKVLNEGLEIHALAVKLGFVEDVLVGNSLIDMYSKCGKLENAWKVFD 404
Query: 202 SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
+M DV+ WNSMIGG+ G ++ LF +M +P+ IT+ N++ H G
Sbjct: 405 --MMPEKDVYTWNSMIGGYCQVGYCGKAHMLFMKMQKSETQPNAITWNNMIWGYIHNGDE 462
Query: 262 KEAWYFFDCLGKNGMTPK-SEHYACMVDVMARAGQVAEAYQFLCQI---PIQPTASMLGA 317
+A F + ++G + + + ++ + GQ +A Q+ I + + +
Sbjct: 463 DQAMDLFRRMEEDGKIKRDTASWNSLISGYLQIGQKDKALSIFRQMQSFSININSVTILS 522
Query: 318 LLNGCMN 324
+L C N
Sbjct: 523 VLPACAN 529
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 123/265 (46%), Gaps = 8/265 (3%)
Query: 64 ARKV---FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
RKV F + KN ++ YAKCG +S AR++F M E+++ +WS +I + R+
Sbjct: 93 GRKVHAHFHLVQEKNPFLETKLVSMYAKCGSLSDARKLFGEMREKNLYTWSAMIGAFSRE 152
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+ E + +F M P+ + +L AC + + G M+H I + +
Sbjct: 153 HRWKEVVELFYMMMEENCLPDAFLLPKILQACGNSRDIKSGEMVHSLAIKCGVDGYPFVN 212
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
S++ +YAKCG + A F +M S+ WN++I G+ HG ++E+ LF M G
Sbjct: 213 NSILAVYAKCGKLSLASKCFE--MMDKSETAAWNALISGYCQHGQIEEAQRLFDAMREEG 270
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
++P +++ L++ G A + G +P + M+ +A+ + ++A
Sbjct: 271 IEPGLVSWNILIAGYNQLGYFDIAMELMKKMEVLGTSPDVVTWTSMISGLAQNDKASKAL 330
Query: 301 QFLCQI---PIQPTASMLGALLNGC 322
+ ++P + + ++ C
Sbjct: 331 HLFNDMILARVEPNGVTISSAVSAC 355
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 160/358 (44%), Gaps = 41/358 (11%)
Query: 44 DRFVSNSLIHMYSSFRDIPNARKV--------FDGIPVKNLVSWNSMLDGYAKCGDISMA 95
D F+ ++ + RDI + V DG P N NS+L YAKCG +S+A
Sbjct: 173 DAFLLPKILQACGNSRDIKSGEMVHSLAIKCGVDGYPFVN----NSILAVYAKCGKLSLA 228
Query: 96 RQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHL 155
+ F++M + + +W+ LI GY + G +EA +F+ MR G +P V+ ++ L
Sbjct: 229 SKCFEMMDKSETAAWNALISGYCQHGQIEEAQRLFDAMREEGIEPGLVSWNILIAGYNQL 288
Query: 156 GALDKG-RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM---KPSDVF 211
G D +M + P +V TS++ A+ +ALH+F ++ +P+ V
Sbjct: 289 GYFDIAMELMKKMEVLGTSP-DVVTWTSMISGLAQNDKASKALHLFNDMILARVEPNGVT 347
Query: 212 IWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL 271
I +S + A ++ E L++ + +G D + +L+ + G ++ AW FD
Sbjct: 348 I-SSAVSACASLKVLNEGLEIHALAVKLGFVEDVLVGNSLIDMYSKCGKLENAWKVFD-- 404
Query: 272 GKNGMTPKSEHYA--CMVDVMARAGQVAEAYQFLCQI---PIQPTASMLGALLNGCMNHG 326
M P+ + Y M+ + G +A+ ++ QP A ++ G +++G
Sbjct: 405 ----MMPEKDVYTWNSMIGGYCQVGYCGKAHMLFMKMQKSETQPNAITWNNMIWGYIHNG 460
Query: 327 KLDLAETVGRKLIELEPHQDGR-------YVGLSNVYAIFRRWDKARSMREAMERMGV 377
D A + R++ +DG+ + L + Y + DKA S+ M+ +
Sbjct: 461 DEDQAMDLFRRM-----EEDGKIKRDTASWNSLISGYLQIGQKDKALSIFRQMQSFSI 513
>29981.m000602 pentatricopeptide repeat-containing protein, putative
Length = 393
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 147/298 (49%), Gaps = 47/298 (15%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFR----- 59
G PDH FP + K+ LL +LG ++HG I + G + D + N+L++MY+ F+
Sbjct: 5 GKHPDHNVFPSVIKSCTLLLDFKLGESVHGCIIRLGVDVDLYTGNALMNMYAKFQSLDLC 64
Query: 60 ------------DIPNA--------------------------RKVFDGIPVKNLVSWNS 81
++P+ RKV I V ++ S
Sbjct: 65 SSERIITHKLLDEMPDRICYDELLHEFEKGIMGMHQNVSLHPDRKVSPQISVNGYITDQS 124
Query: 82 MLDGYAKC--GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
+ C D+ R+VF++MP++D++SW+ +I G G ++EAL + EM K
Sbjct: 125 YKASHNICRTSDVDSVRKVFEMMPKRDLVSWNTVIAGNAHNGMHEEALVMVREMGNVNLK 184
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
P+ T+ SVL A +DKG+ +H Y I + L + + +SL+DMYAKC ++++L V
Sbjct: 185 PDSFTLSSVLPIFAEYVNVDKGKEIHGYAIRHGLDGDVFIGSSLIDMYAKCTRVEDSLRV 244
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
F L+ D WNS+I G + L E L F +M VKP ++++ ++L ACAH
Sbjct: 245 F--SLLPRRDDISWNSIIAGCVQNSLFDEGLRFFRQMLKANVKPRQVSFSSILPACAH 300
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 123/246 (50%), Gaps = 33/246 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M V + PD T + A + + G IHGY + G + D F+ +SLI MY
Sbjct: 178 MGNVNLKPDSFTLSSVLPIFAEYVNVDKGKEIHGYAIRHGLDGDVFIGSSLIDMY----- 232
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AKC + + +VF L+P +D +SW+ +I G V+
Sbjct: 233 --------------------------AKCTRVEDSLRVFSLLPRRDDISWNSIIAGCVQN 266
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+DE L F +M + KP +V+ S+L ACAHL L+ GR +H Y++ + +
Sbjct: 267 SLFDEGLRFFRQMLKANVKPRQVSFSSILPACAHLTTLNLGRQLHGYILRVRFDNNVFIA 326
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+SLVDMYAKCG ++ A +F MK D+ W +MI G+A HG ++++ LF +M + G
Sbjct: 327 SSLVDMYAKCGNVKVARWIFDK--MKQHDMVSWTAMIMGYALHGHARDAISLFEQMEMRG 384
Query: 241 VKPDEI 246
+K I
Sbjct: 385 MKLGNI 390
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 31/146 (21%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML+ V P ++F + A A L LG +HGYI + ++++ F+++SL+ MY
Sbjct: 279 MLKANVKPRQVSFSSILPACAHLTTLNLGRQLHGYILRVRFDNNVFIASSLVDMY----- 333
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AKCG++ +AR +FD M + D++SW+ +I GY
Sbjct: 334 --------------------------AKCGNVKVARWIFDKMKQHDMVSWTAMIMGYALH 367
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMV 146
G +A+++FE+M + G K + V
Sbjct: 368 GHARDAISLFEQMEMRGMKLGNILTV 393
>28196.m000203 pentatricopeptide repeat-containing protein, putative
Length = 468
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/246 (35%), Positives = 128/246 (52%), Gaps = 37/246 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKREL--GLAIHGYITKAGYESDRFVSNSLIHMYSSF 58
ML G PD T L S+CL + G+ +H + + G +S+ V+N+LI MYS F
Sbjct: 233 MLHDGFMPDISTIVTLL--SSCLQPEAVRQGMQVHSHGIRFGCDSEIHVANTLISMYSKF 290
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
GD+ AR +FD M + ++W+ +I GY
Sbjct: 291 -------------------------------GDVYSARCLFDSMCNRSCVTWTSMISGYA 319
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
KG+ DEAL +F M +G KP+ VT++SV+ C G L+ G+ +H Y N L +V
Sbjct: 320 EKGNMDEALKLFNAMEAAGEKPDLVTVLSVISGCGQTGILEVGKWIHVYADSNCLKHNVV 379
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+ +L+DMYAKCG+I +A +F + M V W +MI G A +GL KESLDLF +M
Sbjct: 380 VCNALIDMYAKCGSIDDAWDLFNT--MPDRTVVTWTTMIAGCALNGLFKESLDLFYQMID 437
Query: 239 VGVKPD 244
G+KP+
Sbjct: 438 FGLKPN 443
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 119/259 (45%), Gaps = 31/259 (11%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ P++ TFPF+ KA A L IH ++ K+ + S+ FV +L
Sbjct: 33 GIEPNNFTFPFILKACAKLSNLHYSQVIHTHVIKSPFYSNVFVQTAL------------- 79
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
LD KC + +A VF MP++DV SW+ ++ G+ + G +
Sbjct: 80 ------------------LDMCVKCHQLDIAYNVFVKMPKRDVTSWNAMLLGFAQLGFSE 121
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
+F EMR +G P+ VT++ V A + + L+ + +H + I + + + + +
Sbjct: 122 RVFCMFREMRFAGVFPDSVTLMGVSGAISCMKDLELAKSVHSFGIRIGIHNDVSVANTWI 181
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
+YAKC + A VF + V WNSMI G+A ++L+ + M G PD
Sbjct: 182 SLYAKCYDLAMAESVFNGIEVGLRSVVSWNSMIAGYAYLEKRIDALNSYKRMLHDGFMPD 241
Query: 245 EITYLNLLSACAHGGLVKE 263
T + LLS+C V++
Sbjct: 242 ISTIVTLLSSCLQPEAVRQ 260
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 2/130 (1%)
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
+A+++F +++ G +PN T +L ACA L L +++H +VI + + ++T+L+
Sbjct: 21 KAISLFRQLKQKGIEPNNFTFPFILKACAKLSNLHYSQVIHTHVIKSPFYSNVFVQTALL 80
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
DM KC + A +VF M DV WN+M+ GFA G + +F EM GV PD
Sbjct: 81 DMCVKCHQLDIAYNVFVK--MPKRDVTSWNAMLLGFAQLGFSERVFCMFREMRFAGVFPD 138
Query: 245 EITYLNLLSA 254
+T + + A
Sbjct: 139 SVTLMGVSGA 148
>29681.m001372 pentatricopeptide repeat-containing protein, putative
Length = 494
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 121/198 (61%), Gaps = 8/198 (4%)
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
D P+ NL ++ Y+KCGD+ A++ FD+ E+ + W+ +I Y G +AL
Sbjct: 281 DKDPIDNL-----LVTMYSKCGDLISAQRAFDIAREKSLYLWTSMIAAYTHLGYPVQALR 335
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
+F + + KPNE T+ ++L ACA LG+L G + Y++ N L ++ ++TSL+ M+
Sbjct: 336 LFNTLLGTAIKPNEATLATILSACADLGSLSMGEEIEEYILANGLHSSVQVQTSLIHMFC 395
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV-GVKPDEIT 247
+CG++++A VF + D+ W+SMI G+A HG+ +E+ LF +M V G+KPD +
Sbjct: 396 RCGSLEKAKAVFER--LATKDLAAWSSMINGYAIHGMAEEAFSLFHKMQTVEGIKPDAVI 453
Query: 248 YLNLLSACAHGGLVKEAW 265
Y ++L AC+H GL+++ +
Sbjct: 454 YTSILLACSHSGLIEDVF 471
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 174/420 (41%), Gaps = 77/420 (18%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML+ GV + TFP L KA + G IH ++ + G++ H++
Sbjct: 41 MLQSGVHGNGFTFPLLLKACSNTNSIRDGTKIHSHLIQLGFQ----------HVFV---- 86
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
++LD Y+KC D++ +R+VFD MP + +SW+ +I Y R
Sbjct: 87 ------------------MTTLLDMYSKCYDLASSRKVFDEMPMRSTVSWNSIISAYCRF 128
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVL--CACAHLGALDKGRMMHHYVIDNELPLTLV 178
DEA+++ ++MR+ G P T + L C H ++ + +++PLT
Sbjct: 129 FLVDEAISMLQKMRLIGFVPTSTTFLCFLPICLLQHGLSIQCCAFKFGLLEGSDIPLT-- 186
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+L++MY K G + EA +F +M + W ++IGG+ G V+E+ LF++M I
Sbjct: 187 --NALLNMYVKHGQVHEARTLF--DMMHEKSLISWTTVIGGYVDFGNVREAFSLFNQMRI 242
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAE 298
++ D I ++ L+S CA G + A L K G K +V + ++ G +
Sbjct: 243 -SMRLDFIVFITLISGCAREGNLLLASSVHSLLVKYGCDDKDPIDNLLVTMYSKCGDLIS 301
Query: 299 A----------------------------------YQFLCQIPIQPTASMLGALLNGCMN 324
A + L I+P + L +L+ C +
Sbjct: 302 AQRAFDIAREKSLYLWTSMIAAYTHLGYPVQALRLFNTLLGTAIKPNEATLATILSACAD 361
Query: 325 HGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYS 384
G L + E + ++ H + +++ +F R + ER+ K +S
Sbjct: 362 LGSLSMGEEIEEYILANGLHSSVQVQ--TSLIHMFCRCGSLEKAKAVFERLATKDLAAWS 419
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 137/267 (51%), Gaps = 12/267 (4%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N++L+ Y K G + AR +FD+M E+ ++SW+ +I GYV G+ EA ++F +MR+S +
Sbjct: 187 NALLNMYVKHGQVHEARTLFDMMHEKSLISWTTVIGGYVDFGNVREAFSLFNQMRIS-MR 245
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVI----DNELPLTLVLRTSLVDMYAKCGAIQE 195
+ + ++++ CA G L +H ++ D++ P+ LV MY+KCG +
Sbjct: 246 LDFIVFITLISGCAREGNLLLASSVHSLLVKYGCDDKDPID----NLLVTMYSKCGDLIS 301
Query: 196 ALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC 255
A F + + +++W SMI + G ++L LF+ + +KP+E T +LSAC
Sbjct: 302 AQRAF--DIAREKSLYLWTSMIAAYTHLGYPVQALRLFNTLLGTAIKPNEATLATILSAC 359
Query: 256 AHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASML 315
A G + + + NG+ + ++ + R G + +A ++ + A+
Sbjct: 360 ADLGSLSMGEEIEEYILANGLHSSVQVQTSLIHMFCRCGSLEKAKAVFERLATKDLAAW- 418
Query: 316 GALLNGCMNHGKLDLAETVGRKLIELE 342
+++NG HG + A ++ K+ +E
Sbjct: 419 SSMINGYAIHGMAEEAFSLFHKMQTVE 445
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 32/160 (20%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+L + P+ T + A A L +G I YI G S V SLIHM+
Sbjct: 340 LLGTAIKPNEATLATILSACADLGSLSMGEEIEEYILANGLHSSVQVQTSLIHMFCRCGS 399
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A+ VF+ + K+L +W+SM++GYA G MA
Sbjct: 400 LEKAKAVFERLATKDLAAWSSMINGYAIHG---MA------------------------- 431
Query: 121 GDYDEALAVFEEMR-VSGPKPNEVTMVSVLCACAHLGALD 159
+EA ++F +M+ V G KP+ V S+L AC+H G ++
Sbjct: 432 ---EEAFSLFHKMQTVEGIKPDAVIYTSILLACSHSGLIE 468
>30155.m001641 pentatricopeptide repeat-containing protein, putative
Length = 352
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 111/183 (60%), Gaps = 2/183 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
++LD YAK G I +VF+ M E+ ++WS ++ GYV+ Y+EALA F R G +
Sbjct: 125 TALLDVYAKSGLIKEGIRVFEGMSERTAVTWSSMVAGYVQNELYEEALASFNRARAIGLE 184
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
N+ T+ SV CACA L A +GR +H V + +SLVDMYAKCG+++EA
Sbjct: 185 YNQFTISSVSCACAGLAASIEGRQVHAVVCKTGFGSNSYVASSLVDMYAKCGSVKEAYIA 244
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F + +++ +WN MI FA H E + LF +M +G+ PDE+TY+++LSAC+H
Sbjct: 245 FLDA--QRTNIVLWNVMISAFAKHSHSLEVMILFEKMQQIGMHPDEVTYVSVLSACSHAC 302
Query: 260 LVK 262
+++
Sbjct: 303 IMQ 305
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 121/231 (52%), Gaps = 3/231 (1%)
Query: 70 GIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAV 129
G+ L S N +++ Y+KCG I AR+VFD M + ++SW+ +I Y + G+ +AL +
Sbjct: 15 GLTADTLTS-NMLINVYSKCGRIDCARKVFDKMLGRSLVSWNTMIGTYTQNGEEQKALGL 73
Query: 130 FEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAK 189
F EM+ G +E T+ +VLCA A + +H + + + + + T+L+D+YAK
Sbjct: 74 FLEMQREGNPFSEFTVSTVLCASAAKSYTFVCKQLHAFAMKVAMDANVYISTALLDVYAK 133
Query: 190 CGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYL 249
G I+E + VF M W+SM+ G+ + L +E+L F+ +G++ ++ T
Sbjct: 134 SGLIKEGIRVFEG--MSERTAVTWSSMVAGYVQNELYEEALASFNRARAIGLEYNQFTIS 191
Query: 250 NLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
++ ACA E + K G S + +VD+ A+ G V EAY
Sbjct: 192 SVSCACAGLAASIEGRQVHAVVCKTGFGSNSYVASSLVDMYAKCGSVKEAY 242
>29957.m001429 pentatricopeptide repeat-containing protein, putative
Length = 299
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 132/250 (52%), Gaps = 2/250 (0%)
Query: 3 RVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIP 62
+ G+ F + +A + + G +H I K G+ D + S+I MYS I
Sbjct: 31 KTGLKITDFIFSPILRACGKITAVKEGEQVHCLILKHGFSRDVIIMTSVIDMYSKCSAIN 90
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
+A VF +P +++V+ NS++ G +C S A ++F+ M E++ SW+ LI G +
Sbjct: 91 DAYHVFGEMPERDIVATNSLIYGLCRCHFTSKAIEMFNNMDERNKGSWNSLISGLAQNSK 150
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTS 182
ALA FE MR+ G K + +TMVSVL CA L AL G +H VI L + +
Sbjct: 151 ESIALAFFERMRLEGAKVDVITMVSVLSICAELAALINGTKIHGLVIKYGFEFYLPVGNA 210
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
+VDMYAKCG+++ A F+ +K +V W ++I + HG E+L M GV
Sbjct: 211 IVDMYAKCGSMENACLCFKQLAIK--NVVSWTTLIVSYGKHGQGVEALKALDAMERDGVT 268
Query: 243 PDEITYLNLL 252
P++IT+L L+
Sbjct: 269 PNKITFLGLV 278
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 56/244 (22%)
Query: 113 LIDGYVRKGDYDEALAV-FEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN 171
+I V KG +A+A+ F E++ +G K + +L AC + A+ +G +H ++ +
Sbjct: 8 MIAALVNKGQSRQAIALLFNELQKTGLKITDFIFSPILRACGKITAVKEGEQVHCLILKH 67
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFI------------------- 212
+++ TS++DMY+KC AI +A HVF G M D+
Sbjct: 68 GFSRDVIIMTSVIDMYSKCSAINDAYHVF--GEMPERDIVATNSLIYGLCRCHFTSKAIE 125
Query: 213 ------------WNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA---- 256
WNS+I G A + +L F M + G K D IT +++LS CA
Sbjct: 126 MFNNMDERNKGSWNSLISGLAQNSKESIALAFFERMRLEGAKVDVITMVSVLSICAELAA 185
Query: 257 -------HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ 309
HG ++K + F+ +G +VD+ A+ G + A Q+ I+
Sbjct: 186 LINGTKIHGLVIKYGFEFYLPVGN-----------AIVDMYAKCGSMENACLCFKQLAIK 234
Query: 310 PTAS 313
S
Sbjct: 235 NVVS 238
>30138.m003853 pentatricopeptide repeat-containing protein, putative
Length = 332
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 125/204 (61%), Gaps = 2/204 (0%)
Query: 54 MYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCL 113
MYS ++ A +F+ +P++N++S N +++ Y G++ AR +FD MPE++V +W+ +
Sbjct: 1 MYSKIGELQTALLLFNSMPMRNIMSCNILINAYIHSGELDSARNLFDEMPERNVATWNAV 60
Query: 114 IDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL 173
+ G ++ +E L +F +M G P+E T+ SVL CA L ++ GR +H YV+
Sbjct: 61 VAGLIQFEINEEGLNLFRDMYELGFLPDEYTLGSVLRGCAGLKSMYAGRQVHCYVVKCGF 120
Query: 174 PLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF 233
LV+ +SL MY K G++ E V +S M ++ WN++I G + +G +E LDL+
Sbjct: 121 EFNLVVGSSLAHMYMKSGSLSEGERVIKS--MPSRNIVAWNTLIAGKSQNGHSEEVLDLY 178
Query: 234 SEMHIVGVKPDEITYLNLLSACAH 257
+ M I+G +PD+IT+ +++S+C+
Sbjct: 179 NMMRIMGFRPDKITFASVISSCSE 202
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 133/260 (51%), Gaps = 33/260 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M +G PD T + + A L G +H Y+ K G+E + V +SL HMY
Sbjct: 80 MYELGFLPDEYTLGSVLRGCAGLKSMYAGRQVHCYVVKCGFEFNLVVGSSLAHMY----- 134
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
K G +S +V MP +++++W+ LI G +
Sbjct: 135 --------------------------MKSGSLSEGERVIKSMPSRNIVAWNTLIAGKSQN 168
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +E L ++ MR+ G +P+++T SV+ +C+ L L +G+ +H VI + +
Sbjct: 169 GHSEEVLDLYNMMRIMGFRPDKITFASVISSCSELTTLGQGQQIHAEVIKAGASSVVAVT 228
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+SL+ MY++CG +++++ VF K DV +W+SMI + HG +E++ LF +M
Sbjct: 229 SSLISMYSRCGCLEDSVKVFLE--CKDVDVILWSSMIAAYGFHGRGEEAIKLFHQMEQEN 286
Query: 241 VKPDEITYLNLLSACAHGGL 260
++ +++T+L+LL AC+H GL
Sbjct: 287 LEANDVTFLSLLYACSHCGL 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 79/172 (45%), Gaps = 32/172 (18%)
Query: 1 MLRV-GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFR 59
M+R+ G PD +TF + + + L G IH + KAG S V++SLI MYS
Sbjct: 180 MMRIMGFRPDKITFASVISSCSELTTLGQGQQIHAEVIKAGASSVVAVTSSLISMYS--- 236
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
+CG + + +VF + DV+ WS +I Y
Sbjct: 237 ----------------------------RCGCLEDSVKVFLECKDVDVILWSSMIAAYGF 268
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN 171
G +EA+ +F +M + N+VT +S+L AC+H G DKG +H+ DN
Sbjct: 269 HGRGEEAIKLFHQMEQENLEANDVTFLSLLYACSHCGLKDKGVEIHYRQADN 320
>29992.m001416 pentatricopeptide repeat-containing protein, putative
Length = 599
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 146/276 (52%), Gaps = 22/276 (7%)
Query: 3 RVGVF------------PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNS 50
RVG+F P+ +++ L S LL++ +HG G E + V N+
Sbjct: 85 RVGLFDNARDLFDKMPEPNLISYNSLISGSLDLLRQ-----VHGAAILIGLEFNVIVYNA 139
Query: 51 LIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSW 110
LI Y + +F + +++VSW SM+D YA+ + A ++F MP ++ +SW
Sbjct: 140 LIDSYGKCGQHNTSYCIFSRMFERDVVSWTSMVDAYARASRMDDAFRLFMEMPVKNTVSW 199
Query: 111 SCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID 170
+ LI G+ + G +AL +F +M+ P+ T V+VL ACA L +++G+ +H ++I
Sbjct: 200 TSLIAGFAKNGHSYKALELFLQMQEENVLPSAFTFVTVLGACADLALIERGKQIHGHIIR 259
Query: 171 NELPLTLV---LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
+ L + +L+DMY KCG ++ + +F M D+ WNS+I G A +G +
Sbjct: 260 SSGRTDLFNMYVYNALIDMYCKCGDMKSSKSLFEG--MSEKDIVSWNSLITGLAQNGHAE 317
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKE 263
ESLDLF +M P+ +T+ +LSAC+H G KE
Sbjct: 318 ESLDLFRKMVEGNRLPNHVTFSGVLSACSHTGRKKE 353
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 158/326 (48%), Gaps = 17/326 (5%)
Query: 20 SACLLKR--ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLV 77
S C+ R +LGL +H ++ K F SN ++ +YS F I +A+KVFD P+KN+
Sbjct: 15 SKCISTRNLKLGLTLHSFLIKTALICSPFFSNRVMDLYSKFNVIDSAQKVFDDNPIKNIH 74
Query: 78 SWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG 137
SWN+M+ GYA+ G AR +FD MPE +++S++ LI G + D V + G
Sbjct: 75 SWNTMIGGYARVGLFDNARDLFDKMPEPNLISYNSLISGSL-----DLLRQVHGAAILIG 129
Query: 138 PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL 197
+ N + +++ + G + + + + + +V TS+VD YA+ + +A
Sbjct: 130 LEFNVIVYNALIDSYGKCGQHNTSYCIFSRMFERD----VVSWTSMVDAYARASRMDDAF 185
Query: 198 HVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
+F M + W S+I GFA +G ++L+LF +M V P T++ +L ACA
Sbjct: 186 RLFME--MPVKNTVSWTSLIAGFAKNGHSYKALELFLQMQEENVLPSAFTFVTVLGACAD 243
Query: 258 GGLVKEAWYFFD-CLGKNGMTPKSEHYA--CMVDVMARAGQVAEAYQFLCQIPIQPTASM 314
L++ + +G T Y ++D+ + G + + + + S
Sbjct: 244 LALIERGKQIHGHIIRSSGRTDLFNMYVYNALIDMYCKCGDMKSSKSLFEGMSEKDIVSW 303
Query: 315 LGALLNGCMNHGKLDLAETVGRKLIE 340
+L+ G +G + + + RK++E
Sbjct: 304 -NSLITGLAQNGHAEESLDLFRKMVE 328
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 34/159 (21%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRF---VSNSLIHMYSS 57
M V P TF + A A L E G IHG+I ++ +D F V N+LI MY
Sbjct: 222 MQEENVLPSAFTFVTVLGACADLALIERGKQIHGHIIRSSGRTDLFNMYVYNALIDMYCK 281
Query: 58 FRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGY 117
D+ +++ +F+G+ K++VSWNS++ G A+
Sbjct: 282 CGDMKSSKSLFEGMSEKDIVSWNSLITGLAQ----------------------------- 312
Query: 118 VRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLG 156
G +E+L +F +M PN VT VL AC+H G
Sbjct: 313 --NGHAEESLDLFRKMVEGNRLPNHVTFSGVLSACSHTG 349
>30055.m001535 pentatricopeptide repeat-containing protein, putative
Length = 661
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 136/264 (51%), Gaps = 38/264 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R GV P+ TF + A + E +H + K+ YE V +L
Sbjct: 392 MSREGVRPNDYTFSTILAAQPVVSPFE----VHAQVIKSDYEKSPSVGTAL--------- 438
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
LD Y K G+++ A +VF+ + ++D+++WS ++ GY +
Sbjct: 439 ----------------------LDAYVKLGNLNEASKVFERIDDKDIVAWSAMVAGYAQT 476
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCAC-AHLGALDKGRMMHHYVIDNELPLTLVL 179
GD + A+ + +M G +PNE T SV+ AC A A+++G+ H + I + L +
Sbjct: 477 GDTEGAVKILIQMAKKGVEPNEYTFSSVINACTAPTAAVEQGKQFHAWSIKSRFNDALCV 536
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
++LV MYAK G I+ A VFR ++ D+ WNSM+ G+A HG +++L++F EM
Sbjct: 537 SSALVTMYAKRGEIESANEVFRRQGVR--DLVSWNSMVSGYAQHGHARKALEVFKEMQDQ 594
Query: 240 GVKPDEITYLNLLSACAHGGLVKE 263
++ D +T++ ++SAC H GLV E
Sbjct: 595 NLELDGVTFIGVISACTHAGLVDE 618
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 126/256 (49%), Gaps = 34/256 (13%)
Query: 3 RVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIP 62
R + D T + KA ACL ++ G+ +H Y K+G+ D V SL+ MY
Sbjct: 89 RSDLLTDGSTLSCVLKACACLSCKKFGIQVHDYCVKSGFLEDISVGTSLVDMY------- 141
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
M Y + G ++VFD M E++V+SW+ L+ GY G
Sbjct: 142 -------------------MKSEYVEEG-----KRVFDEMEERNVVSWTSLLVGYAHNGL 177
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGAL-DKGRMMHHYVIDNELPLTLVLRT 181
EAL F EM+ KPN T +VL A A A+ DKG +H VI N T+ +
Sbjct: 178 NMEALECFFEMQAGAIKPNPFTFATVLGALADSKAIADKGVQIHTMVIKNGFEATIFVCN 237
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV 241
SL++MY+K G ++ A VF + M D WNSM+ G+ +GL E++++F + + GV
Sbjct: 238 SLINMYSKSGMVKNAKAVFDN--MVTRDAISWNSMVAGYVANGLYLEAIEMFYHLRLAGV 295
Query: 242 KPDEITYLNLLSACAH 257
K + +++ +CA+
Sbjct: 296 KLTNFIFSSVIKSCAN 311
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 113/226 (50%), Gaps = 32/226 (14%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G+ IH + K G+E+ FV NSLI+MYS K
Sbjct: 217 GVQIHTMVIKNGFEATIFVCNSLINMYS-------------------------------K 245
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
G + A+ VFD M +D +SW+ ++ GYV G Y EA+ +F +R++G K SV
Sbjct: 246 SGMVKNAKAVFDNMVTRDAISWNSMVAGYVANGLYLEAIEMFYHLRLAGVKLTNFIFSSV 305
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
+ +CA++ L R +H V+ +RT+L+ Y K I +A +F S +
Sbjct: 306 IKSCANIKELGFARQLHGQVLKGGFEYDHNIRTALMVAYNKGREIDDAFKIF-SMMYGIR 364
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
+V W ++I G +GL +++++LF EM GV+P++ T+ +L+A
Sbjct: 365 NVVSWTAIISGHLQNGLAEQAVNLFCEMSREGVRPNDYTFSTILAA 410
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 165/345 (47%), Gaps = 41/345 (11%)
Query: 12 TFPFLAKASACLLKRELGLA--IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFD 69
F F + +C +ELG A +HG + K G+E D + +L+ Y+ R+I +A K+F
Sbjct: 299 NFIFSSVIKSCANIKELGFARQLHGQVLKGGFEYDHNIRTALMVAYNKGREIDDAFKIF- 357
Query: 70 GIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAV 129
SM+ G ++V+SW+ +I G+++ G ++A+ +
Sbjct: 358 -----------SMMYGI------------------RNVVSWTAIISGHLQNGLAEQAVNL 388
Query: 130 FEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAK 189
F EM G +PN+ T ++L A + + +H VI ++ + + T+L+D Y K
Sbjct: 389 FCEMSREGVRPNDYTFSTILAAQPVVSPFE----VHAQVIKSDYEKSPSVGTALLDAYVK 444
Query: 190 CGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYL 249
G + EA VF + D+ W++M+ G+A G + ++ + +M GV+P+E T+
Sbjct: 445 LGNLNEASKVFER--IDDKDIVAWSAMVAGYAQTGDTEGAVKILIQMAKKGVEPNEYTFS 502
Query: 250 NLLSAC-AHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPI 308
++++AC A V++ F K+ + +V + A+ G++ A + + +
Sbjct: 503 SVINACTAPTAAVEQGKQFHAWSIKSRFNDALCVSSALVTMYAKRGEIESANEVFRRQGV 562
Query: 309 QPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDG-RYVGL 352
+ S ++++G HG A V +++ + DG ++G+
Sbjct: 563 RDLVSW-NSMVSGYAQHGHARKALEVFKEMQDQNLELDGVTFIGV 606
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 6/213 (2%)
Query: 88 KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
KC S+A+ VFD P+QDV+ + L+ Y R + E + +F + S + T+
Sbjct: 45 KC---SIAQNVFDRSPKQDVVQCNHLLFDYSRNNSHHEVVNLFVAIHRSDLLTDGSTLSC 101
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP 207
VL ACA L G +H Y + + + + TSLVDMY K ++E VF M+
Sbjct: 102 VLKACACLSCKKFGIQVHDYCVKSGFLEDISVGTSLVDMYMKSEYVEEGKRVFDE--MEE 159
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHG-GLVKEAWY 266
+V W S++ G+A +GL E+L+ F EM +KP+ T+ +L A A + +
Sbjct: 160 RNVVSWTSLLVGYAHNGLNMEALECFFEMQAGAIKPNPFTFATVLGALADSKAIADKGVQ 219
Query: 267 FFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
+ KNG ++++ +++G V A
Sbjct: 220 IHTMVIKNGFEATIFVCNSLINMYSKSGMVKNA 252
>29813.m001452 pentatricopeptide repeat-containing protein, putative
Length = 476
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 140/247 (56%), Gaps = 8/247 (3%)
Query: 28 LGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVK-----NLVSWNSM 82
+ + ++G + + G+ S S++ ++ D P + +K NL ++
Sbjct: 212 MTIEVYGQMFRYGFIMSVATSLSVLSAFADLGD-PTGGETIHACCIKIGFCSNLNVVTAL 270
Query: 83 LDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNE 142
++ YAK G I R++FD + E+DV+ W+C+ID Y + G ++A+A+ + M++ G + N
Sbjct: 271 IEMYAKTGRIDSGRRIFDGIVEKDVILWNCMIDKYAKVGLLEQAIALLQLMKLEGVRANS 330
Query: 143 VTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRS 202
++ +L ACA G++ G + YV EL + VL T+LVDM+ KCG + +A+ VF
Sbjct: 331 SSLAGLLAACAASGSIKLGWRLSDYVEAEELEVDAVLGTALVDMFGKCGFLDKAIQVFER 390
Query: 203 GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVK 262
M+ DV W +MI G+ HG + ++ LF M G P+E+T+L +LSAC+HGGLV
Sbjct: 391 --MESKDVKSWTAMILGYGVHGQARNAVALFYRMEKEGFIPNEVTFLGVLSACSHGGLVV 448
Query: 263 EAWYFFD 269
EA F+
Sbjct: 449 EAMKCFE 455
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 145/320 (45%), Gaps = 35/320 (10%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D +F + KASA L + G IHG + ++GY V N+L+H+YS
Sbjct: 126 DQFSFITILKASARELAVKAGQGIHGIVARSGYLMFVNVKNTLLHLYSV----------- 174
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPE-QDVLSWSCLIDGYVRKGDYDEAL 127
CG I A+++FD + D++SW+ L+ Y+ +
Sbjct: 175 --------------------CGLIGDAQKLFDEFSQLNDLVSWNALMGAYLHVSQPAMTI 214
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
V+ +M G + T +SVL A A LG G +H I L + T+L++MY
Sbjct: 215 EVYGQMFRYGFIMSVATSLSVLSAFADLGDPTGGETIHACCIKIGFCSNLNVVTALIEMY 274
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
AK G I +F G+++ DV +WN MI +A GL+++++ L M + GV+ + +
Sbjct: 275 AKTGRIDSGRRIF-DGIVEK-DVILWNCMIDKYAKVGLLEQAIALLQLMKLEGVRANSSS 332
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
LL+ACA G +K W D + + + +VD+ + G + +A Q ++
Sbjct: 333 LAGLLAACAASGSIKLGWRLSDYVEAEELEVDAVLGTALVDMFGKCGFLDKAIQVFERME 392
Query: 308 IQPTASMLGALLNGCMNHGK 327
+ S +L G HG+
Sbjct: 393 SKDVKSWTAMIL-GYGVHGQ 411
>29751.m001864 pentatricopeptide repeat-containing protein, putative
Length = 414
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 146/282 (51%), Gaps = 43/282 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKASAC------LLKRELGLAIHGYITKAGYESDRFVSNSLIHM 54
M +G+ D T+ ++ KA LLK+ G IH I + GYE+ + +L+ M
Sbjct: 163 MNSIGMPSDRFTYTYVLKACVASNSLLSLLKK--GKEIHAQILRRGYEAHVHIMTTLVDM 220
Query: 55 YSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLI 114
Y+ F G +S A VF M ++V+SWS +I
Sbjct: 221 YARF-------------------------------GYVSYASCVFSEMSVKNVVSWSAMI 249
Query: 115 DGYVRKGDYDEALAVFEEMRVSGPK--PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
Y + G EAL +F EM + PN VTMVSVL ACA L AL++G+++H Y++
Sbjct: 250 ACYAKNGRPFEALELFREMMLETKDMCPNSVTMVSVLQACAALAALEQGKLLHGYILRRG 309
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDL 232
L L + +SLV MYA+CG +Q A HVF M DV WNS+I + HG K+++ +
Sbjct: 310 LDSILPVISSLVTMYARCGKLQLAQHVFDQ--MDKRDVVSWNSLISSYGVHGFGKKAIQI 367
Query: 233 FSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN 274
F +M GV P I+++++L AC+H GLV+E F+ + K+
Sbjct: 368 FKDMTRNGVFPSPISFVSVLGACSHAGLVEEGKILFESMHKD 409
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 10/218 (4%)
Query: 100 DLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALD 159
+L P + + LI ++G+ +AL + + P P + T +L +C H +
Sbjct: 33 NLNPTIPTANSNKLIQSLCKQGNLKQAL----NLLCNEPDPAQHTYELLLLSCTHQNSFL 88
Query: 160 KGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGG 219
+ +H +++DN L T L++MY+ G+I A VF + ++++N++
Sbjct: 89 DAQFVHQHLLDNGFDQDPFLATKLINMYSSFGSIDNARKVFDK--TRSRTLYVYNALFRA 146
Query: 220 FACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG----LVKEAWYFFDCLGKNG 275
G +E L L+ M+ +G+ D TY +L AC L+K+ + + G
Sbjct: 147 LTLVGNGEEVLRLYRRMNSIGMPSDRFTYTYVLKACVASNSLLSLLKKGKEIHAQILRRG 206
Query: 276 MTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTAS 313
+VD+ AR G V+ A ++ ++ S
Sbjct: 207 YEAHVHIMTTLVDMYARFGYVSYASCVFSEMSVKNVVS 244
>30174.m009151 pentatricopeptide repeat-containing protein, putative
Length = 456
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 129/265 (48%), Gaps = 35/265 (13%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ P+ +T A A + LG +IHG K G+ + N+L+HMY
Sbjct: 200 GILPNDVTIVSALAACARMGNLNLGRSIHGLAIKLGFAEPTLM-NALVHMY--------- 249
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
AKC A +F+ E+DV+SW+ +I G + G
Sbjct: 250 ----------------------AKCHMNRDASYLFETASEKDVVSWNSIISGCSQMGSPY 287
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHY-VIDNELPLTLVLRTSL 183
EAL +F+ MR P+ VT+VSV ACA LGAL G +H Y V + L + + T+L
Sbjct: 288 EALDLFQRMRKESVSPDAVTLVSVFSACASLGALQVGSSLHAYSVKEGLLSSNVYVSTAL 347
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
+ YAKCG A +F M+ + W++MIGG+ G SL +F++M +KP
Sbjct: 348 LTFYAKCGDAGSARTIFDG--MQEKNTVTWSAMIGGYGVQGDAGGSLSIFNDMLRQELKP 405
Query: 244 DEITYLNLLSACAHGGLVKEAWYFF 268
+E+ + +LSAC+H G+V E W F
Sbjct: 406 NEVIFTTILSACSHTGMVGEGWNLF 430
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 113/202 (55%), Gaps = 8/202 (3%)
Query: 66 KVFDGIPVKNLVSWNS-----MLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
K F G +K+ V NS +LD Y KCG I AR VFD + D++SW+ +I GY +
Sbjct: 124 KCFHGYAIKSGVQLNSYLMTALLDMYVKCGVIRDARSVFDELSSIDLVSWTAMIVGYTQS 183
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+AL +F + + +G PN+VT+VS L ACA +G L+ GR +H I L
Sbjct: 184 NLSYDALKLFLDKKWAGILPNDVTIVSALAACARMGNLNLGRSIHGLAIKLGFA-EPTLM 242
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+LV MYAKC ++A ++F + K DV WNS+I G + G E+LDLF M
Sbjct: 243 NALVHMYAKCHMNRDASYLFETASEK--DVVSWNSIISGCSQMGSPYEALDLFQRMRKES 300
Query: 241 VKPDEITYLNLLSACAHGGLVK 262
V PD +T +++ SACA G ++
Sbjct: 301 VSPDAVTLVSVFSACASLGALQ 322
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 114/213 (53%), Gaps = 7/213 (3%)
Query: 51 LIHMYSSFRDIPNARK----VFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQD 106
I S RDI RK + P + V + D YAKCG+I +R FD +++
Sbjct: 10 FIRACSELRDIDEGRKLHCQIIKAGPPDSFV-LTGLTDFYAKCGEIECSRCAFDENLDRN 68
Query: 107 VLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHH 166
V+SW+ +I GYV+ E L +F MR + N+ T+ ++ AC LGAL +G+ H
Sbjct: 69 VVSWTSMIVGYVQNDCPVEGLILFNRMREGLIEGNQFTLGILVTACTKLGALHQGKCFHG 128
Query: 167 YVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLV 226
Y I + + L L T+L+DMY KCG I++A VF + D+ W +MI G+ L
Sbjct: 129 YAIKSGVQLNSYLMTALLDMYVKCGVIRDARSVFDE--LSSIDLVSWTAMIVGYTQSNLS 186
Query: 227 KESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
++L LF + G+ P+++T ++ L+ACA G
Sbjct: 187 YDALKLFLDKKWAGILPNDVTIVSALAACARMG 219
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 32/162 (19%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGY-ESDRFVSNSLIHMYSSFR 59
M + V PD +T + A A L ++G ++H Y K G S+ +VS +L+ Y+
Sbjct: 296 MRKESVSPDAVTLVSVFSACASLGALQVGSSLHAYSVKEGLLSSNVYVSTALLTFYAKCG 355
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
D +AR +FDG+ KN V+W++M+ GY
Sbjct: 356 DAGSARTIFDGMQEKNTVTWSAMIGGYGV------------------------------- 384
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
+GD +L++F +M KPNEV ++L AC+H G + +G
Sbjct: 385 QGDAGGSLSIFNDMLRQELKPNEVIFTTILSACSHTGMVGEG 426
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 3/149 (2%)
Query: 151 ACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDV 210
AC+ L +D+GR +H +I P + VL T L D YAKCG I+ + F L + +V
Sbjct: 13 ACSELRDIDEGRKLHCQIIKAGPPDSFVL-TGLTDFYAKCGEIECSRCAFDENLDR--NV 69
Query: 211 FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDC 270
W SMI G+ + E L LF+ M ++ ++ T L++AC G + + F
Sbjct: 70 VSWTSMIVGYVQNDCPVEGLILFNRMREGLIEGNQFTLGILVTACTKLGALHQGKCFHGY 129
Query: 271 LGKNGMTPKSEHYACMVDVMARAGQVAEA 299
K+G+ S ++D+ + G + +A
Sbjct: 130 AIKSGVQLNSYLMTALLDMYVKCGVIRDA 158
>29585.m000598 pentatricopeptide repeat-containing protein, putative
Length = 664
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 130/269 (48%), Gaps = 34/269 (12%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
+ PD T L L E G IHG I K G++S V NSLI M
Sbjct: 412 ILPDSRTMVCLLSVCILLHDLEQGSCIHGLIIKFGFDSHCNVKNSLIDM----------- 460
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMP-EQDVLSWSCLIDGYVRKGDYD 124
YAKCG ++ A +F +D +SW+ LI GYV
Sbjct: 461 --------------------YAKCGSLANAEFLFKRTEFTKDEVSWNALIAGYVHNEHAK 500
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
EA ++F +M++ +PN VT VSV A A L AL +G +H ++ +++ L+
Sbjct: 501 EAFSLFCQMKLEHFQPNLVTFVSVFPAVARLSALKEGMALHACIMRMGFQSNVLVGNCLI 560
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
DMYAKCG + + H+F MK + WN M+ G+A HG +++LFS M ++ D
Sbjct: 561 DMYAKCGQLHNSEHLFHE--MKNKNAVSWNVMLAGYAVHGQGYHAIELFSLMQKSHIQAD 618
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGK 273
+++L++LSAC H GL+ E FD + K
Sbjct: 619 SLSFLSVLSACRHSGLIDEGRKIFDSMYK 647
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 120/236 (50%), Gaps = 35/236 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+L G+ PD TF F+ KA L+ + G+ IH I G ESD FV +L++MYS
Sbjct: 5 ILNKGLEPDKCTFTFVLKACTGGLEFKEGILIHRGIVFKGLESDVFVGTALVNMYS---- 60
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
K GD +A+ VFD MP++DV++W+ +I G
Sbjct: 61 ---------------------------KMGDPQLAKGVFDKMPKRDVVTWNAMIFGLSHS 93
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
EAL + + M+++G +P+ VT+V+++ A + L +D R +H YVI P V
Sbjct: 94 VAPQEALKLVKSMQLAGQEPDFVTIVNLVPAVSRLADIDACRSLHGYVIRRGFP--AVFS 151
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
L+DMY+KCG I A VF LM+ ++ W +M+ G+A + E LDLF M
Sbjct: 152 NGLIDMYSKCGDIYVACQVFE--LMQHTNDISWRTMMAGYAHNECFFEVLDLFDYM 205
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 157/328 (47%), Gaps = 22/328 (6%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
+M+ YAKCG++ A+Q+F + +D+++WS +ID V+ ++AL++F +M+ K
Sbjct: 253 TAMMTMYAKCGNLDKAKQLFQGLKVKDLVAWSAIIDALVQSRYAEDALSLFRDMQNDFLK 312
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
N VT++SVL ACA L +L G+ +H Y I + +++ TSLV MYAKCG AL V
Sbjct: 313 ANNVTLLSVLPACADLMSLRLGKSVHCYAIKADFDSDILIGTSLVSMYAKCGLFNSALTV 372
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F M D+ N++I ++ G ++++F + I + PD T + LLS C
Sbjct: 373 FNR--MPCEDIVTCNALINEYSQIGDPYHAMEVFHVVQISEILPDSRTMVCLLSVCILLH 430
Query: 260 LVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALL 319
+++ + K G ++D+ A+ G +A A + AL+
Sbjct: 431 DLEQGSCIHGLIIKFGFDSHCNVKNSLIDMYAKCGSLANAEFLFKRTEFTKDEVSWNALI 490
Query: 320 NGCMN--HGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAME---- 373
G ++ H K + KL +P+ L ++F + +++E M
Sbjct: 491 AGYVHNEHAKEAFSLFCQMKLEHFQPN-------LVTFVSVFPAVARLSALKEGMALHAC 543
Query: 374 --RMGVKKS--PGYSFVEMH---GALHR 394
RMG + + G ++M+ G LH
Sbjct: 544 IMRMGFQSNVLVGNCLIDMYAKCGQLHN 571
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 115/223 (51%), Gaps = 10/223 (4%)
Query: 39 AGYESDRFVSNSLIHMYSSFRDIPNARK-----VFDGIPVKNLVSWNSMLDGYAKCGDIS 93
AG E D +L+ S DI R + G P V N ++D Y+KCGDI
Sbjct: 109 AGQEPDFVTIVNLVPAVSRLADIDACRSLHGYVIRRGFPA---VFSNGLIDMYSKCGDIY 165
Query: 94 MARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACA 153
+A QVF+LM + +SW ++ GY + E L +F+ M+ + + N+V++ S L A A
Sbjct: 166 VACQVFELMQHTNDISWRTMMAGYAHNECFFEVLDLFDYMKKNNFRLNKVSVASALLAAA 225
Query: 154 HLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIW 213
+ +G+ + + + + + T+++ MYAKCG + +A +F+ +K D+ W
Sbjct: 226 DVRDSGRGKEICEFARQQGIDSDVSITTAMMTMYAKCGNLDKAKQLFQG--LKVKDLVAW 283
Query: 214 NSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
+++I +++L LF +M +K + +T L++L ACA
Sbjct: 284 SAIIDALVQSRYAEDALSLFRDMQNDFLKANNVTLLSVLPACA 326
>45882.m000013 pentatricopeptide repeat-containing protein, putative
Length = 563
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 161/324 (49%), Gaps = 41/324 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M V PD TFP + A A L E+G + ++ + G+ D ++ N+L+ MY
Sbjct: 24 MKDFNVKPDTYTFPSVINACAALGDFEIGNVVQNHVLEIGFGFDLYIGNALVDMY----- 78
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
A+ GD+ AR VF+ M +D++SW+ LI GY
Sbjct: 79 --------------------------ARFGDLVKARNVFEEMTHRDIVSWNSLISGYSAN 112
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +DEAL ++ E+R++G KP+ T+ SVL AC L A+ +G ++H V + + +++
Sbjct: 113 GYWDEALEIYYELRIAGLKPDNFTLSSVLPACGGLLAVKEGEVIHGLVEKLGMNIDVIMS 172
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
L+ MY K G + +A VF ++K D WN++I G+ L +ES+ LF EM +
Sbjct: 173 NGLLSMYFKFGRLMDAQRVFNKMVVK--DYVSWNTLICGYCQMELFEESIQLFREM-VKR 229
Query: 241 VKPDEITYLNLLSACAHGGLVKE---AWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVA 297
+PD +T ++L AC GL+++ + D + ++G+ ++D A+ G +
Sbjct: 230 FRPDLLTITSVLRAC---GLLRDLEFGKFVHDYILRSGIEFDVTASNIVIDTYAKCGDLL 286
Query: 298 EAYQFLCQIPIQPTASMLGALLNG 321
+ + +I + + S L+NG
Sbjct: 287 ASRKAFDRIKCRDSVSW-NTLING 309
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 132/268 (49%), Gaps = 33/268 (12%)
Query: 2 LRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDI 61
+++ + PD +TF L S L ELG IH + K G++SD VSN+L+ M
Sbjct: 326 MKMDLKPDSITFVTLLSISTRLADTELGKEIHCDLAKLGFDSDLVVSNALVDM------- 378
Query: 62 PNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKG 121
Y+KCG++ + +VF+ M +D+++W+ +I V+
Sbjct: 379 ------------------------YSKCGNVKDSLKVFENMKVRDIVTWNTIIAACVQAE 414
Query: 122 DYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRT 181
D A + +MR P+ T++ +L C+ + A +G+ +H T+ +
Sbjct: 415 DCTLAFRMISQMRNEELIPDMGTLLGILPICSLIAAKRQGKEVHACTFKFGFESTVPVGN 474
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV 241
+L++MY+KC ++ + VF MK DV W +++ + +G K++L F+EM G+
Sbjct: 475 ALIEMYSKCSNLKYCIRVFED--MKTKDVVTWTALVSAYGMYGEGKKALRAFAEMEEAGI 532
Query: 242 KPDEITYLNLLSACAHGGLVKEAWYFFD 269
PD I ++ ++ AC+H G V+E FD
Sbjct: 533 IPDHIAFVAIIYACSHSGSVEEGLACFD 560
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 120/249 (48%), Gaps = 34/249 (13%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD LT + +A L E G +H YI ++G E D SN +I
Sbjct: 232 PDLLTITSVLRACGLLRDLEFGKFVHDYILRSGIEFDVTASNIVI--------------- 276
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
D YAKCGD+ +R+ FD + +D +SW+ LI+GY++ Y E +
Sbjct: 277 ----------------DTYAKCGDLLASRKAFDRIKCRDSVSWNTLINGYIQSRSYGEGV 320
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+F++M++ KP+ +T V++L L + G+ +H + LV+ +LVDMY
Sbjct: 321 KLFKKMKMD-LKPDSITFVTLLSISTRLADTELGKEIHCDLAKLGFDSDLVVSNALVDMY 379
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
+KCG ++++L VF + MK D+ WN++I + + S+M + PD T
Sbjct: 380 SKCGNVKDSLKVFEN--MKVRDIVTWNTIIAACVQAEDCTLAFRMISQMRNEELIPDMGT 437
Query: 248 YLNLLSACA 256
L +L C+
Sbjct: 438 LLGILPICS 446
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 105/195 (53%), Gaps = 15/195 (7%)
Query: 110 WSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI 169
W+ +I G + +AL ++ +M+ KP+ T SV+ ACA LG + G ++ ++V+
Sbjct: 1 WNSVIRALTHNGLFSKALDLYFKMKDFNVKPDTYTFPSVINACAALGDFEIGNVVQNHVL 60
Query: 170 DNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKES 229
+ L + +LVDMYA+ G + +A +VF M D+ WNS+I G++ +G E+
Sbjct: 61 EIGFGFDLYIGNALVDMYARFGDLVKARNVFEE--MTHRDIVSWNSLISGYSANGYWDEA 118
Query: 230 LDLFSEMHIVGVKPDEITYLNLLSACAHGGL--VKEAWYFFDCLGKNGMTPKSEHYACMV 287
L+++ E+ I G+KPD T ++L AC GGL VKE + K GM +
Sbjct: 119 LEIYYELRIAGLKPDNFTLSSVLPAC--GGLLAVKEGEVIHGLVEKLGMN---------I 167
Query: 288 DVMARAGQVAEAYQF 302
DV+ G ++ ++F
Sbjct: 168 DVIMSNGLLSMYFKF 182
>29693.m002080 pentatricopeptide repeat-containing protein, putative
Length = 562
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 134/268 (50%), Gaps = 33/268 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ GV P T+ + A A + +G+ +HG ++K GY+SD F+S SLI YS+ +
Sbjct: 289 MMDSGVKPTSTTYACVLTACANAMDFNMGVQVHGRVSKLGYKSDEFISASLITFYSNCKQ 348
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ N A QVF+ ++V+ W+ L+ G
Sbjct: 349 VKN-------------------------------AHQVFNETLSKNVVIWTALLTGCELN 377
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+++AL VF +M G PN+ T +S +C L ALD+G+ +H L + +
Sbjct: 378 SKHEDALRVFSDMIKMGVFPNQSTFISAFNSCRGLEALDRGKEIHTVTAKLGLETDVFVG 437
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
SLV MY +CG + +A+ VF+ +K + WNS+I G + HG +L F++M
Sbjct: 438 NSLVVMYNECGNVNDAVAVFKK--IKEKNDVSWNSIIVGSSQHGHGIWALIFFNQMIRTC 495
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFF 268
V PDEIT LLSAC+H G++++ FF
Sbjct: 496 VDPDEITLTGLLSACSHSGMLQKGRRFF 523
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 153/346 (44%), Gaps = 51/346 (14%)
Query: 51 LIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSW 110
+I+ Y+ + +A +FD + V++++SWNSM+ G CGD+ MAR++FD MPE++V+SW
Sbjct: 145 MINGYARSGRLNDALMLFDRMTVRDIISWNSMIKGCLDCGDLGMARRLFDEMPERNVVSW 204
Query: 111 SCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID 170
+ +++GY++ G + A F +M V A A+
Sbjct: 205 TTMVNGYLKFGRVEIAERFFWDMPVRD--------------VAAWNAM------------ 238
Query: 171 NELPLTLVLRTSLVDMYAKCGA--IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKE 228
++ CG I + L++F M +V W SMIGG +G +E
Sbjct: 239 ---------------IFGYCGNRRIADGLNLFEK--MPCRNVISWTSMIGGLDQNGKSEE 281
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVD 288
+L LF +M GVKP TY +L+ACA+ + K G A ++
Sbjct: 282 ALILFGKMMDSGVKPTSTTYACVLTACANAMDFNMGVQVHGRVSKLGYKSDEFISASLIT 341
Query: 289 VMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELE--PHQD 346
+ QV A+Q + + + ALL GC + K + A V +I++ P+Q
Sbjct: 342 FYSNCKQVKNAHQVFNE-TLSKNVVIWTALLTGCELNSKHEDALRVFSDMIKMGVFPNQ- 399
Query: 347 GRYVGLSNVYAIFRRWDKARSMREAMERMGVKKS--PGYSFVEMHG 390
++ N D+ + + ++G++ G S V M+
Sbjct: 400 STFISAFNSCRGLEALDRGKEIHTVTAKLGLETDVFVGNSLVVMYN 445
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 31/168 (18%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+++GVFP+ TF + L + G IH K G E+D FV NSL+ MY+
Sbjct: 390 MIKMGVFPNQSTFISAFNSCRGLEALDRGKEIHTVTAKLGLETDVFVGNSLVVMYN---- 445
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+CG+++ A VF + E++ +SW+ +I G +
Sbjct: 446 ---------------------------ECGNVNDAVAVFKKIKEKNDVSWNSIIVGSSQH 478
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
G AL F +M + P+E+T+ +L AC+H G L KGR Y+
Sbjct: 479 GHGIWALIFFNQMIRTCVDPDEITLTGLLSACSHSGMLQKGRRFFQYI 526
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 16/217 (7%)
Query: 78 SWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG 137
S+ +L K + AR +F +P + + +I+GY R G ++AL +F+ M V
Sbjct: 110 SYRDLLSDLLKNQKLDQARFLFAKIPSPEAYLCTLMINGYARSGRLNDALMLFDRMTVR- 168
Query: 138 PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELP-LTLVLRTSLVDMYAKCGAIQEA 196
+ ++ S++ C G L R + +E+P +V T++V+ Y K G ++ A
Sbjct: 169 ---DIISWNSMIKGCLDCGDLGMARRLF-----DEMPERNVVSWTTMVNGYLKFGRVEIA 220
Query: 197 LHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
F M DV WN+MI G+ + + + L+LF +M V I++ +++
Sbjct: 221 ERFFWD--MPVRDVAAWNAMIFGYCGNRRIADGLNLFEKMPCRNV----ISWTSMIGGLD 274
Query: 257 HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARA 293
G +EA F + +G+ P S YAC++ A A
Sbjct: 275 QNGKSEEALILFGKMMDSGVKPTSTTYACVLTACANA 311
>29736.m002025 pentatricopeptide repeat-containing protein, putative
Length = 593
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 133/255 (52%), Gaps = 5/255 (1%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P+ LT + A + LL + G+ +H ++ K D V SL+ MYS A V
Sbjct: 334 PNSLTLVSVIAACSTLLYIQFGMQVHVFLKKTQMGCDTMVGTSLVDMYSKCGYWKWAYNV 393
Query: 68 FDGI-PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGD 122
F+ + KNL++WNSM+ G A ++F+L+ Q D +W+ +I G+ +
Sbjct: 394 FNEMNDNKNLITWNSMIAGMMLNAQSQNAIELFELLESQGLEPDSATWNSMISGFEQLDK 453
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTS 182
EA F++M++SG P+ ++ S+L ACA L AL G+ +H +V+ + + T
Sbjct: 454 GVEAFKFFKKMQLSGMVPSLKSVTSLLAACASLTALQCGKEIHGHVVRTNMNFDEFMATG 513
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
L+DMY KCG VF +KP D IWN++I G+A +G + ++F +M V+
Sbjct: 514 LIDMYMKCGFSLWGQRVFDQFEIKPKDPAIWNALISGYARNGENESVFEVFDQMLEEKVE 573
Query: 243 PDEITYLNLLSACAH 257
P+ T+ +L+ C H
Sbjct: 574 PNLTTFTGVLTVCGH 588
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 140/319 (43%), Gaps = 37/319 (11%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
+ P TFP L KA A L IH ++ K G+ + + + +L MY +P+A
Sbjct: 132 IHPHQFTFPALLKACAKLNSPLQAQIIHTHLIKTGFNLNIYTATALTSMYMQLALLPDAM 191
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
KVFD MP+++ S++ I G+ +KG E
Sbjct: 192 KVFDE-------------------------------MPDRNQASFNATISGFSQKGCCME 220
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
AL VF+EM G +PN VT+ SVL AC ++D MH I + + + + TSLV
Sbjct: 221 ALIVFKEMAFCGFRPNSVTIASVLPAC---DSVDLSVQMHCCAIKLGVEMDVYVATSLVT 277
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIVGVKPD 244
Y+ CG + A VF G M V +N+ + G +G+ L +F +M +KP+
Sbjct: 278 TYSGCGHLTLATKVF--GEMPNRTVVSYNAFVSGLLHNGVTNVVLKVFKDMREYSTLKPN 335
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLC 304
+T +++++AC+ ++ L K M + +VD+ ++ G AY
Sbjct: 336 SLTLVSVIAACSTLLYIQFGMQVHVFLKKTQMGCDTMVGTSLVDMYSKCGYWKWAYNVFN 395
Query: 305 QIPIQPTASMLGALLNGCM 323
++ +++ G M
Sbjct: 396 EMNDNKNLITWNSMIAGMM 414
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 108/230 (46%), Gaps = 9/230 (3%)
Query: 118 VRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
V G Y EA+++ + + P++ T ++L ACA L + + +++H ++I L +
Sbjct: 112 VANGFYKEAISLHSRLHSASIHPHQFTFPALLKACAKLNSPLQAQIIHTHLIKTGFNLNI 171
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
T+L MY + + +A+ VF M + +N+ I GF+ G E+L +F EM
Sbjct: 172 YTATALTSMYMQLALLPDAMKVFDE--MPDRNQASFNATISGFSQKGCCMEALIVFKEMA 229
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVA 297
G +P+ +T ++L AC L + C K G+ +V + G +
Sbjct: 230 FCGFRPNSVTIASVLPACDSVDLSVQ---MHCCAIKLGVEMDVYVATSLVTTYSGCGHLT 286
Query: 298 EAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE---LEPH 344
A + ++P + S A ++G +++G ++ V + + E L+P+
Sbjct: 287 LATKVFGEMPNRTVVS-YNAFVSGLLHNGVTNVVLKVFKDMREYSTLKPN 335
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ P + L A A L + G IHG++ + D F++ LI MY
Sbjct: 468 GMVPSLKSVTSLLAACASLTALQCGKEIHGHVVRTNMNFDEFMATGLIDMYMKCGFSLWG 527
Query: 65 RKVFDGIPV--KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDV 107
++VFD + K+ WN+++ GYA+ G+ +VFD M E+ V
Sbjct: 528 QRVFDQFEIKPKDPAIWNALISGYARNGENESVFEVFDQMLEEKV 572
>30128.m008587 pentatricopeptide repeat-containing protein, putative
Length = 686
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 145/289 (50%), Gaps = 47/289 (16%)
Query: 21 ACLLKREL--GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVS 78
AC + R + G +HG+ K E D VSNSL+ MY
Sbjct: 207 ACGMLRSMHHGKILHGFAKKCRLEFDILVSNSLLKMY----------------------- 243
Query: 79 WNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP 138
C I AR F MP +D++SW+ +I+GYV+ G+++EAL +F +M ++G
Sbjct: 244 --------VDCHCIEDARATFHQMPTKDIISWTEIINGYVKIGEFNEALKLFRQMNIAGI 295
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
+P+ +++ ++L ACA A GR +H Y++ N + L L+L+ +L+DMY K G ++ A
Sbjct: 296 RPDSLSLSTILPACARPAAHKLGREIHAYLLRNGIELNLMLQNALIDMYVKSGFMESASL 355
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI-VGVKPDEITYLNLLSACAH 257
+F MK DV W MI GF+ HG + ++LF + ++ D+ Y +L C
Sbjct: 356 IFVR--MKEKDVISWTVMILGFSLHGQGELGVELFRRLEKDPSIEIDQYIYAAVLRCCTT 413
Query: 258 GGLVKEAWYFFDCLGKNGMTPKSEHYACMV-DVMARAGQVAEAYQFLCQ 305
+V+E +F C+ K +Y V D +A+ VA ++F+ Q
Sbjct: 414 ACMVEEGKLYFGCI-------KEPNYGQAVADCLAK---VAYVFEFVGQ 452
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 158/383 (41%), Gaps = 38/383 (9%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML G PD TFP + AS LG IH K G+ SD +V +SLI
Sbjct: 88 MLLRGALPDRRTFPRVLNASRLSTNLFLGKQIHAQALKFGFSSDPYVISSLI-------- 139
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
D Y AR +FD P ++ +SW+ L Y+ +
Sbjct: 140 -----------------------DFYGHLDSTDAARSLFDNSPSKNSVSWTVLARLYLMQ 176
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
D L++F +M + V + + L AC L ++ G+++H + L +++
Sbjct: 177 NKPDVVLSLFYQMLDFNSLFDPVALATALRACGMLRSMHHGKILHGFAKKCRLEFDILVS 236
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
SL+ MY C I++A F M D+ W +I G+ G E+L LF +M+I G
Sbjct: 237 NSLLKMYVDCHCIEDARATFHQ--MPTKDIISWTEIINGYVKIGEFNEALKLFRQMNIAG 294
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
++PD ++ +L ACA K L +NG+ ++D+ ++G + A
Sbjct: 295 IRPDSLSLSTILPACARPAAHKLGREIHAYLLRNGIELNLMLQNALIDMYVKSGFMESAS 354
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFR 360
++ + S +L G HG+ +L + R+L + + +Y+ A+ R
Sbjct: 355 LIFVRMKEKDVISWTVMIL-GFSLHGQGELGVELFRRLEKDPSIEIDQYI----YAAVLR 409
Query: 361 RWDKARSMREAMERMGVKKSPGY 383
A + E G K P Y
Sbjct: 410 CCTTACMVEEGKLYFGCIKEPNY 432
>30138.m004070 pentatricopeptide repeat-containing protein, putative
Length = 335
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 129/209 (61%), Gaps = 7/209 (3%)
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
AR + DG +L+ N ++D Y+ C + A +VFD +P++D ++W+ LI ++R
Sbjct: 54 ARLLRDGFQSDSLLLTN-LMDLYSFCEKGTEACRVFDEIPQRDTVAWNVLISCFIRNQRT 112
Query: 124 DEALAVFEEMRVSGP---KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+ L +F++M VSG +P++VT + ++ AC++LGAL+ G +H Y+ + L
Sbjct: 113 RDVLGLFDDM-VSGEFGCEPDDVTCLLLVQACSNLGALEFGEKVHLYIQGHRYGDKTNLC 171
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
SL+ MY++CG + +A VF++ M +V W++MI GFA +G +++++ F +M +G
Sbjct: 172 NSLITMYSRCGCLDKAYGVFKN--MPNKNVVTWSAMISGFAMNGYGRQAIETFGKMQRIG 229
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFD 269
V PD+ T+ +LSAC+H GLV E FFD
Sbjct: 230 VLPDDQTFTGVLSACSHCGLVDEGMLFFD 258
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 31/159 (19%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G PD +T L +A + L E G +H YI Y + NSLI MYS + A
Sbjct: 128 GCEPDDVTCLLLVQACSNLGALEFGEKVHLYIQGHRYGDKTNLCNSLITMYSRCGCLDKA 187
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
VF +P KN+V+W++M+ G+A ++GY R
Sbjct: 188 YGVFKNMPNKNVVTWSAMISGFA--------------------------MNGYGR----- 216
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRM 163
+A+ F +M+ G P++ T VL AC+H G +D+G +
Sbjct: 217 QAIETFGKMQRIGVLPDDQTFTGVLSACSHCGLVDEGML 255
>30169.m006451 pentatricopeptide repeat-containing protein, putative
Length = 474
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 125/236 (52%), Gaps = 38/236 (16%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWN-SMLDG 85
+G +IHG++ K G E++ +SWN S+ D
Sbjct: 267 NIGRSIHGFVVKQGIETN--------------------------------LSWNTSLADM 294
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
Y CGD + A+ +F++ P++D++ W+ +I +++K EAL F M +S +PN VT+
Sbjct: 295 YISCGDETTAKYLFEICPDRDLILWNAMIAAFLKKNKNGEALLFFNRM-ISEEEPNSVTI 353
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELP--LTLVLRTSLVDMYAKCGAIQEALHVFRSG 203
++VL C+ L L G+ +H Y P L L L + + MYA+CG++Q A +F++
Sbjct: 354 INVLSTCSDLANLPYGQCLHAYAARRYSPISLNLSLANAFITMYARCGSMQNAEKIFKT- 412
Query: 204 LMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
+ D+ WN+MI G+ HG +++ F +M G +P+ +T+L++LSAC H G
Sbjct: 413 -LPKRDIISWNTMITGYGTHGSACDAILAFMQMLEDGFRPNGVTFLSILSACRHAG 467
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 89/177 (50%), Gaps = 3/177 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N++L YA A +VF+ M + DV+S++ LI EA +F MR S
Sbjct: 188 NALLRMYADLNCAESALKVFNEMSDVDVVSYNTLILALCSSNLRGEAWELFGMMRESKVN 247
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
PN TM+S+L C L+ GR +H +V+ + L TSL DMY CG A ++
Sbjct: 248 PNSHTMISLLAVCGDETCLNIGRSIHGFVVKQGIETNLSWNTSLADMYISCGDETTAKYL 307
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
F + D+ +WN+MI F E+L F+ M I +P+ +T +N+LS C+
Sbjct: 308 FE--ICPDRDLILWNAMIAAFLKKNKNGEALLFFNRM-ISEEEPNSVTIINVLSTCS 361
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 119/275 (43%), Gaps = 46/275 (16%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M++ G+ D +T + +ASA +LG+ IH K Y D F+ N+L++MY
Sbjct: 39 MVKDGIEFDMITILVVIQASADFGSLQLGMQIHQMAIKLSYVGDLFIQNALLNMY----- 93
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
A+ G + +A +FD + +DV W+ +I Y+
Sbjct: 94 --------------------------AENGSLKLACHLFDNVITRDVALWNSMISAYIDY 127
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLG-ALDKGRMMHHYVIDNELPLTLVL 179
Y+EA ++F MR + + +E T+ +L CA L G+ +H N + +
Sbjct: 128 AYYEEANSLFSTMR-TKTREDERTIAVMLSLCAEAADGLKMGKSLHALACKNGMRMDNST 186
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+L+ MYA + AL VF M DV +N++I L E+ +LF M
Sbjct: 187 ANALLRMYADLNCAESALKVFNE--MSDVDVVSYNTLILALCSSNLRGEAWELFGMMRES 244
Query: 240 GVKPDEITYLNLLSACA-----------HGGLVKE 263
V P+ T ++LL+ C HG +VK+
Sbjct: 245 KVNPNSHTMISLLAVCGDETCLNIGRSIHGFVVKQ 279
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 74/138 (53%), Gaps = 3/138 (2%)
Query: 122 DYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRT 181
D+ +AL +F M G + + +T++ V+ A A G+L G +H I L ++
Sbjct: 28 DFVKALELFVHMVKDGIEFDMITILVVIQASADFGSLQLGMQIHQMAIKLSYVGDLFIQN 87
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV 241
+L++MYA+ G+++ A H+F + + + DV +WNSMI + + +E+ LFS M
Sbjct: 88 ALLNMYAENGSLKLACHLFDNVITR--DVALWNSMISAYIDYAYYEEANSLFSTMR-TKT 144
Query: 242 KPDEITYLNLLSACAHGG 259
+ DE T +LS CA
Sbjct: 145 REDERTIAVMLSLCAEAA 162
>29801.m003177 pentatricopeptide repeat-containing protein, putative
Length = 379
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 132/254 (51%), Gaps = 33/254 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M ++GV PD LT LA A L + +IHG++T+ G+ F+ +++I
Sbjct: 150 MRQIGVRPDLLTVLSLASIVAQLNDHQNSRSIHGFVTRRGW----FMKDTVIG------- 198
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
N+++D YAK G AR VF+ +P +DV+SW+ LI GY +
Sbjct: 199 -------------------NAVVDMYAKLGATESARAVFERLPVKDVISWNTLITGYAQN 239
Query: 121 GDYDEALAVFEEMR-VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
G EA+ V+ M P + T VS+L A +HLGAL +G H +VI N L L + +
Sbjct: 240 GLASEAIEVYNMMEECKEVSPTQGTWVSILPAYSHLGALHQGMRTHGHVIKNSLHLDVFV 299
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
T L+DMY KCG + +A+ +F + D WN++I A HG ++ + LF EM
Sbjct: 300 GTCLIDMYGKCGKLDDAMSLFYE--VPRKDAVPWNAIISCHAVHGHGEKVIKLFREMIDD 357
Query: 240 GVKPDEITYLNLLS 253
GVKPD++ + + S
Sbjct: 358 GVKPDQLVAIQVWS 371
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 164/349 (46%), Gaps = 38/349 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + GV D + A L G IH + K G E D FVSN+LI MY+ F
Sbjct: 49 MRKDGVAMDAFAVASILPVCAKLNDVLSGKLIHLLVIKLGLEFDSFVSNALIAMYAKF-- 106
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
G + +A++VFD M +D++SW+ +I Y +
Sbjct: 107 -----------------------------GSLGLAQKVFDHMVVRDIVSWNSIIAAYEQN 137
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT-LVL 179
D A + F++MR G +P+ +T++S+ A L R +H +V + V+
Sbjct: 138 DDAATARSFFDKMRQIGVRPDLLTVLSLASIVAQLNDHQNSRSIHGFVTRRGWFMKDTVI 197
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
++VDMYAK GA + A VF + DV WN++I G+A +GL E++++++ M
Sbjct: 198 GNAVVDMYAKLGATESARAVFER--LPVKDVISWNTLITGYAQNGLASEAIEVYNMMEEC 255
Query: 240 G-VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAE 298
V P + T++++L A +H G + + + KN + C++D+ + G++ +
Sbjct: 256 KEVSPTQGTWVSILPAYSHLGALHQGMRTHGHVIKNSLHLDVFVGTCLIDMYGKCGKLDD 315
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE--LEPHQ 345
A ++P + A A+++ HG + + R++I+ ++P Q
Sbjct: 316 AMSLFYEVP-RKDAVPWNAIISCHAVHGHGEKVIKLFREMIDDGVKPDQ 363
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 121/252 (48%), Gaps = 24/252 (9%)
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
YAK G + AR++FD MP +D SW+ +I GY + G+ E L + +EMR G + +
Sbjct: 2 YAKFGLVGEARKLFDEMPIRDCGSWNAMISGYCQNGNVVEVLDIVDEMRKDGVAMDAFAV 61
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
S+L CA L + G+++H VI L + +L+ MYAK G++ A VF ++
Sbjct: 62 ASILPVCAKLNDVLSGKLIHLLVIKLGLEFDSFVSNALIAMYAKFGSLGLAQKVFDHMVV 121
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA--------- 256
+ D+ WNS+I + + + F +M +GV+PD +T L+L S A
Sbjct: 122 R--DIVSWNSIIAAYEQNDDAATARSFFDKMRQIGVRPDLLTVLSLASIVAQLNDHQNSR 179
Query: 257 --HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASM 314
HG + + W+ D + N +VD+ A+ G A ++P++ S
Sbjct: 180 SIHGFVTRRGWFMKDTVIGNA----------VVDMYAKLGATESARAVFERLPVKDVIS- 228
Query: 315 LGALLNGCMNHG 326
L+ G +G
Sbjct: 229 WNTLITGYAQNG 240
>29631.m001012 pentatricopeptide repeat-containing protein, putative
Length = 483
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 145/261 (55%), Gaps = 9/261 (3%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
++++D Y KC DI + V++ +P++ + + L+ + G D+ + +F M G
Sbjct: 196 SALIDMYGKCFDIENSISVYESLPKRTLECCNSLMTSLLHSGFVDDVIDMFGLMVDEGIG 255
Query: 140 PNEVTMVSVLCACAH--LGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL 197
+E T +VL A L +L R++H VI + + SL+D Y++ G ++ +
Sbjct: 256 LDEFTFCTVLKALLESVLVSLASCRLVHCCVIKFGFESDISVSCSLIDGYSRSGKVELSQ 315
Query: 198 HVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
VF S L P +VF S+I GFA +G+ +E L++F M G+KPD++T+L +L+ C+H
Sbjct: 316 KVF-SQLSSP-NVFCLTSIINGFARNGMGRECLEIFETMIQKGLKPDKVTFLCVLTGCSH 373
Query: 258 GGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLG 316
GLV+E F+ + ++G+ P EH +CMVD++ RAG + EA + L + P + T M
Sbjct: 374 SGLVEEGRSVFNSMTSRHGICPDREHLSCMVDLLGRAGLLDEAEELLQRTPGRGTCVMWS 433
Query: 317 ALLNGCMNHGKLDLAETVGRK 337
+LL C H E VGR+
Sbjct: 434 SLLRSCRVHRN----EMVGRR 450
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 130/271 (47%), Gaps = 13/271 (4%)
Query: 74 KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM 133
N+ N+++D Y+ CG ++ A+ F +P +DV+SW+ ++ G + +AL +F M
Sbjct: 88 SNIFVANALVDFYSACGSLNDAKISFQAIPLEDVISWNSILSVCADNGLHFDALELFYMM 147
Query: 134 RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV-LRTSLVDMYAKCGA 192
+ G KP+ + V L + G + G+ +H V+ V ++++L+DMY KC
Sbjct: 148 QFWGKKPSIRSFVGFLNLSSMNGDIVFGKQIHCCVVKLGFYNGSVHVQSALIDMYGKCFD 207
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
I+ ++ V+ S + + NS++ G V + +D+F M G+ DE T+ +L
Sbjct: 208 IENSISVYES--LPKRTLECCNSLMTSLLHSGFVDDVIDMFGLMVDEGIGLDEFTFCTVL 265
Query: 253 SACAHGGLVKEA--WYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQP 310
A LV A C+ K G ++D +R+G+V + + Q+ P
Sbjct: 266 KALLESVLVSLASCRLVHCCVIKFGFESDISVSCSLIDGYSRSGKVELSQKVFSQLS-SP 324
Query: 311 TASMLGALLNGCMNHGKLDLAETVGRKLIEL 341
L +++NG +G +GR+ +E+
Sbjct: 325 NVFCLTSIINGFARNG-------MGRECLEI 348
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 117/230 (50%), Gaps = 7/230 (3%)
Query: 95 ARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAH 154
A +FD +PE+++ W+ ++ G+ G +DE L ++ E ++ + N ++ ++ C +
Sbjct: 7 ALGLFDELPERNLAIWNVVLRGFCELGRFDELLRIYNETKLDNLELNGLSFCYLIRGCCN 66
Query: 155 LGALDKGRMMHHYVID-NELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIW 213
++GR +H +VI + + + +LVD Y+ CG++ +A F++ + DV W
Sbjct: 67 KTFFNEGRQLHCHVIKVGWVNSNIFVANALVDFYSACGSLNDAKISFQA--IPLEDVISW 124
Query: 214 NSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK 273
NS++ A +GL ++L+LF M G KP +++ L+ + G + C+ K
Sbjct: 125 NSILSVCADNGLHFDALELFYMMQFWGKKPSIRSFVGFLNLSSMNGDIVFGKQIHCCVVK 184
Query: 274 NGMTPKSEHY-ACMVDVMARAGQVAEA---YQFLCQIPIQPTASMLGALL 319
G S H + ++D+ + + + Y+ L + ++ S++ +LL
Sbjct: 185 LGFYNGSVHVQSALIDMYGKCFDIENSISVYESLPKRTLECCNSLMTSLL 234
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 102/225 (45%), Gaps = 45/225 (20%)
Query: 1 MLRVGVFPDHLTFPFLAKA--SACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSF 58
M+ G+ D TF + KA + L+ +H + K G+ESD VS SLI
Sbjct: 249 MVDEGIGLDEFTFCTVLKALLESVLVSLASCRLVHCCVIKFGFESDISVSCSLI------ 302
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
DGY++ G + ++++VF + +V + +I+G+
Sbjct: 303 -------------------------DGYSRSGKVELSQKVFSQLSSPNVFCLTSIINGFA 337
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMM------HHYVIDNE 172
R G E L +FE M G KP++VT + VL C+H G +++GR + H + +
Sbjct: 338 RNGMGRECLEIFETMIQKGLKPDKVTFLCVLTGCSHSGLVEEGRSVFNSMTSRHGICPDR 397
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMI 217
L + +VD+ + G + EA + + + + V +W+S++
Sbjct: 398 EHL-----SCMVDLLGRAGLLDEAEELLQRTPGRGTCV-MWSSLL 436
>30147.m014512 pentatricopeptide repeat-containing protein, putative
Length = 538
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 178/376 (47%), Gaps = 31/376 (8%)
Query: 16 LAKASACLLKRELGLAIHGYITKA-----------GYESDRFVSNSLIHMYSSFRDIPNA 64
+ K SA + + L +HG +A G++ ++L+ R IP
Sbjct: 130 IKKPSARICSQIEKLVLHGKYREALELFEILELDGGFDVGSSTYDALVSACIGLRSIPGV 189
Query: 65 RKVFD-----GIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
++V + G ++ N +L KCG + AR+ FD MPE++++SW+ +I G V
Sbjct: 190 KRVLNYMLSNGFEPDQYMA-NRVLLVQVKCGMMIHARKWFDEMPERNLVSWNTIISGLVD 248
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
GDY EA +F M T +++ A A LG + GR +H + E+ + +
Sbjct: 249 MGDYKEAFRLFLIMWEEFSDAGSRTFATMIQASAGLGWISIGRQLHSCALKMEVGDDIFV 308
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+L+DMY KCG+I++A VF M ++ WN++I G+A HG +E+LD+ EM
Sbjct: 309 SCALIDMYGKCGSIEDAHCVFDE--MPERNIVAWNTIIAGYALHGYSEEALDMVYEMRNS 366
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
GV+ D T+ ++ CA + A L ++G + +VD ++ G+V A
Sbjct: 367 GVRMDHFTFSIVVRICARLASLNYAKQAHASLLRHGFGSDIVANSALVDFYSKWGRVETA 426
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE--LEPHQ--------DGRY 349
Q+P + S AL+ G NHGK D A + ++++ + P+ Y
Sbjct: 427 RHVFDQMPCKNVIS-WNALIAGYGNHGKGDDAIELFEQMLQERIRPNHVTFLAVLSACSY 485
Query: 350 VGLS-NVYAIFRRWDK 364
GLS + + IFR D+
Sbjct: 486 SGLSEHGWEIFRSMDR 501
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 114/194 (58%), Gaps = 2/194 (1%)
Query: 81 SMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKP 140
+++D Y KCG I A VFD MPE+++++W+ +I GY G +EAL + EMR SG +
Sbjct: 311 ALIDMYGKCGSIEDAHCVFDEMPERNIVAWNTIIAGYALHGYSEEALDMVYEMRNSGVRM 370
Query: 141 NEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF 200
+ T V+ CA L +L+ + H ++ + +V ++LVD Y+K G ++ A HVF
Sbjct: 371 DHFTFSIVVRICARLASLNYAKQAHASLLRHGFGSDIVANSALVDFYSKWGRVETARHVF 430
Query: 201 RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGL 260
M +V WN++I G+ HG ++++LF +M ++P+ +T+L +LSAC++ GL
Sbjct: 431 DQ--MPCKNVISWNALIAGYGNHGKGDDAIELFEQMLQERIRPNHVTFLAVLSACSYSGL 488
Query: 261 VKEAWYFFDCLGKN 274
+ W F + ++
Sbjct: 489 SEHGWEIFRSMDRD 502
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 31/161 (19%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M GV DH TF + + A L H + + G+ SD +++L+ YS +
Sbjct: 363 MRNSGVRMDHFTFSIVVRICARLASLNYAKQAHASLLRHGFGSDIVANSALVDFYSKWGR 422
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ AR VFD +P KN++SWN+++ GY G K
Sbjct: 423 VETARHVFDQMPCKNVISWNALIAGYGNHG-----------------------------K 453
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
G D+A+ +FE+M +PN VT ++VL AC++ G + G
Sbjct: 454 G--DDAIELFEQMLQERIRPNHVTFLAVLSACSYSGLSEHG 492
>29794.m003469 pentatricopeptide repeat-containing protein, putative
Length = 367
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 135/263 (51%), Gaps = 20/263 (7%)
Query: 29 GLAIHGYITKA----------GYESDRFVSNSLIHMYSSFRDIPNARKV-----FDGIP- 72
G +I G+ KA G E D F S + S + ++ G P
Sbjct: 85 GYSIAGFGEKAVVLFREMLEDGQEPDEFTLTSALKACSDLAAVREGSQIHSFLIISGFPY 144
Query: 73 -VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFE 131
+K ++ +++D Y KCG + A++VF + E++V+S+S L GY G+ +A+++F
Sbjct: 145 LIKTSIA-GALIDQYVKCGKLCEAQRVFSQIEEKNVISFSALFLGYAHGGNLADAMSLFR 203
Query: 132 EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG 191
R S + + + S++ A +++G+ MH Y I L + S+VDMY KCG
Sbjct: 204 RFRESDVEADGFVLSSMIGVFADFALVEQGKQMHAYSIKVPSGSDLSVCNSIVDMYLKCG 263
Query: 192 AIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
I EA F M DV W MI G+ HGL KE++ LF++M ++PD++TYL +
Sbjct: 264 VIDEAERFFAE--MSTRDVISWTVMITGYGKHGLGKEAVCLFNKMQSDDIEPDDVTYLAV 321
Query: 252 LSACAHGGLVKEAWYFFDCLGKN 274
L AC+H GLV+E ++ + +N
Sbjct: 322 LLACSHSGLVEEGQWYLQFMPRN 344
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 156/326 (47%), Gaps = 40/326 (12%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
GV P+ TF KAS+ L + +G+ IH TK+G N ++
Sbjct: 5 GVKPNEFTFSMNLKASSMLNRPYIGMQIHANCTKSG--------NDIV------------ 44
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
+V NS++D Y+KCG I A +FD MP ++++SW+ +I GY G +
Sbjct: 45 -----------IVVANSIVDMYSKCGRIKEAACMFDFMPVRNLISWNSMISGYSIAGFGE 93
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELP--LTLVLRTS 182
+A+ +F EM G +P+E T+ S L AC+ L A+ +G +H ++I + P + + +
Sbjct: 94 KAVVLFREMLEDGQEPDEFTLTSALKACSDLAAVREGSQIHSFLIISGFPYLIKTSIAGA 153
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
L+D Y KCG + EA VF ++ +V ++++ G+A G + +++ LF V+
Sbjct: 154 LIDQYVKCGKLCEAQRVFSQ--IEEKNVISFSALFLGYAHGGNLADAMSLFRRFRESDVE 211
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYAC--MVDVMARAGQVAEAY 300
D +++ A LV++ K + S+ C +VD+ + G + EA
Sbjct: 212 ADGFVLSSMIGVFADFALVEQGKQMHAYSIK--VPSGSDLSVCNSIVDMYLKCGVIDEAE 269
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHG 326
+F ++ + S ++ G HG
Sbjct: 270 RFFAEMSTRDVISWT-VMITGYGKHG 294
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 115/239 (48%), Gaps = 6/239 (2%)
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
M +SG KPNE T L A + L G +H + + +V+ S+VDMY+KCG
Sbjct: 1 MGLSGVKPNEFTFSMNLKASSMLNRPYIGMQIHANCTKSGNDIVIVVANSIVDMYSKCGR 60
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
I+EA +F M ++ WNSMI G++ G ++++ LF EM G +PDE T + L
Sbjct: 61 IKEAACMFD--FMPVRNLISWNSMISGYSIAGFGEKAVVLFREMLEDGQEPDEFTLTSAL 118
Query: 253 SACAHGGLVKEAWYFFDCLGKNGMT--PKSEHYACMVDVMARAGQVAEAYQFLCQIPIQP 310
AC+ V+E L +G K+ ++D + G++ EA + QI +
Sbjct: 119 KACSDLAAVREGSQIHSFLIISGFPYLIKTSIAGALIDQYVKCGKLCEAQRVFSQIEEKN 178
Query: 311 TASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYV-GLSNVYAIFRRWDKARSM 368
S AL G + G L A ++ R+ E + DG + + V+A F ++ + M
Sbjct: 179 VIS-FSALFLGYAHGGNLADAMSLFRRFRESDVEADGFVLSSMIGVFADFALVEQGKQM 236
>29807.m000472 pentatricopeptide repeat-containing protein, putative
Length = 506
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 153/304 (50%), Gaps = 39/304 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G+ D+ P KA L G +HGY+ K G + FVS+SLI M
Sbjct: 14 MIDCGLLADNFVVPNALKACGALYWIRFGKGVHGYVVKMGLDGCVFVSSSLIDM------ 67
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
Y KCG + AR+VFD M +++V++W+ +I GYV+
Sbjct: 68 -------------------------YGKCGILMDARKVFDAMRQKNVVTWNSMIMGYVQN 102
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G Y EA+ VF MR+ + + VT++ L A A+LGA+ +G+ H + L +L
Sbjct: 103 GLYLEAIKVFANMRLEDIEYSRVTLLGFLSAAANLGAVTEGKQGHAIAVKGGYELDNILG 162
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+S+++ Y+K G I++A VF + M DV WN +I + LV+++L++ M
Sbjct: 163 SSILNFYSKVGLIEDAELVFSN--MAEKDVVTWNLLISSYLQCELVEKALNMCHLMRFQN 220
Query: 241 VKPDEITYLNLLSACAHGG---LVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVA 297
+K D +T ++LSACA+ L KEA + C+ +N + + +V++ A+ G +
Sbjct: 221 MKFDSVTLDSILSACANTKNIQLGKEAHCY--CI-RNNLESDVDVANAIVNMYAKCGSIH 277
Query: 298 EAYQ 301
+A +
Sbjct: 278 DAKE 281
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 163/361 (45%), Gaps = 52/361 (14%)
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
A V G + N++ +S+L+ Y+K G I A VF M E+DV++W+ LI Y++
Sbjct: 148 AIAVKGGYELDNILG-SSILNFYSKVGLIEDAELVFSNMAEKDVVTWNLLISSYLQCELV 206
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
++AL + MR K + VT+ S+L ACA+ + G+ H Y I N L + + ++
Sbjct: 207 EKALNMCHLMRFQNMKFDSVTLDSILSACANTKNIQLGKEAHCYCIRNNLESDVDVANAI 266
Query: 184 VDMYAKCGAIQEALHVFRSGLMK---------------------------------PSDV 210
V+MYAKCG+I +A VF S + K P +V
Sbjct: 267 VNMYAKCGSIHDAKEVFNSTMNKDLTLWNMLLTAYAQLGLVGETLRLFYQMQLESVPPNV 326
Query: 211 FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDC 270
WN++I GF +G V ++ +LF+EM VG+ P+ +T L+S H GL EA F
Sbjct: 327 TSWNAVILGFLRNGQVNKAKELFAEMQAVGIHPNLVTLTTLISGLIHNGLGNEALAIFLK 386
Query: 271 LGKNGMTPK-----SEHYACMVDVMARAGQVAEAY----QFLCQIPIQPTASMLGALLNG 321
+ + G+ P + AC + G+ Y QIP+ A+ L +
Sbjct: 387 MQEYGIRPNITSIINTISACTDPASLQCGRAIHGYILRHDLWSQIPV---ANALATMYAK 443
Query: 322 CMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSP 381
C N + L E P D Y+ S A+ D A+ + M++ G++ +
Sbjct: 444 CGNTRQAK--RVFDMILSEASPMCDANYLCPSQTDALS---DGAQDGKTGMKK-GLEGNK 497
Query: 382 G 382
G
Sbjct: 498 G 498
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 110/231 (47%), Gaps = 39/231 (16%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D +T + A A +LG H Y + ESD V+N++++MY+ I +A++VF
Sbjct: 224 DSVTLDSILSACANTKNIQLGKEAHCYCIRNNLESDVDVANAIVNMYAKCGSIHDAKEVF 283
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYD 124
+ K+L WN +L YA+ G + ++F M + +V SW+ +I G++R G +
Sbjct: 284 NSTMNKDLTLWNMLLTAYAQLGLVGETLRLFYQMQLESVPPNVTSWNAVILGFLRNGQVN 343
Query: 125 -----------------------------------EALAVFEEMRVSGPKPNEVTMVSVL 149
EALA+F +M+ G +PN ++++ +
Sbjct: 344 KAKELFAEMQAVGIHPNLVTLTTLISGLIHNGLGNEALAIFLKMQEYGIRPNITSIINTI 403
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF 200
AC +L GR +H Y++ ++L + + +L MYAKCG ++A VF
Sbjct: 404 SACTDPASLQCGRAIHGYILRHDLWSQIPVANALATMYAKCGNTRQAKRVF 454
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
AL F EM G + + + L AC L + G+ +H YV+ L + + +SL+D
Sbjct: 7 ALMGFYEMIDCGLLADNFVVPNALKACGALYWIRFGKGVHGYVVKMGLDGCVFVSSSLID 66
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MY KCG + +A VF + M+ +V WNSMI G+ +GL E++ +F+ M + ++
Sbjct: 67 MYGKCGILMDARKVFDA--MRQKNVVTWNSMIMGYVQNGLYLEAIKVFANMRLEDIEYSR 124
Query: 246 ITYLNLLSACAHGGLVKEA 264
+T L LSA A+ G V E
Sbjct: 125 VTLLGFLSAAANLGAVTEG 143
>29757.m000711 pentatricopeptide repeat-containing protein, putative
Length = 542
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 124/217 (57%), Gaps = 11/217 (5%)
Query: 105 QDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMM 164
+D++SW+ +I + +EAL +F ++ P+ T VL ACA LG + +
Sbjct: 336 KDIVSWTGIITALAERQP-EEALFLFRQLHREDLAPDWYTFSIVLKACAGLGTERQALTV 394
Query: 165 HHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
H VI +VL +L+ YA+CG+I + VF M+ ++ WNSM+ +A HG
Sbjct: 395 HSRVIKAGFEGDVVLENALIHAYARCGSIFLSKQVFDE--MRMRNLVSWNSMLKAYALHG 452
Query: 225 LVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYA 284
KE+L LFSEM+ V+PD T + LLSAC+H G+V+E F+ M+ + +HYA
Sbjct: 453 QAKEALHLFSEMN---VRPDSATMVALLSACSHAGMVEEGIKIFE-----SMSDRHDHYA 504
Query: 285 CMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNG 321
CMVD++ +AG+V EA + + +P++P A + ++ G
Sbjct: 505 CMVDILGQAGRVFEAKELINIMPMEPDAVVSASIACG 541
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 94/169 (55%), Gaps = 8/169 (4%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N +++ YAKCGD+ ARQ+F MPE++V+SW+ LI GY + G E +F M + +
Sbjct: 105 NHLINMYAKCGDLEYARQLFAEMPERNVVSWTALISGYAQHGQAYECSRLFSSMLMHC-R 163
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG-AIQEALH 198
PNE + S L +C + D G+ +H L T+ + +L+ MY+ G + EA
Sbjct: 164 PNEFALTSNLSSCDY----DHGKQVHALAFKMGLDATVYIGNTLISMYSNNGDSDDEAWS 219
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
VF + ++ ++ WNSMI GF L +++ LFS+MH G+ D T
Sbjct: 220 VFAN--LEYRNLVSWNSMIAGFQVRKLGAKAISLFSQMHRDGIGFDRAT 266
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 94/208 (45%), Gaps = 39/208 (18%)
Query: 3 RVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIP 62
R + PD TF + KA A L L +H + KAG+E D + N+LIH Y+ I
Sbjct: 365 REDLAPDWYTFSIVLKACAGLGTERQALTVHSRVIKAGFEGDVVLENALIHAYARCGSIF 424
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
+++VFD + ++NLVSWNSML YA G
Sbjct: 425 LSKQVFDEMRMRNLVSWNSMLKAYA-------------------------------LHGQ 453
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTS 182
EAL +F EM V +P+ TMV++L AC+H G +++G + + D
Sbjct: 454 AKEALHLFSEMNV---RPDSATMVALLSACSHAGMVEEGIKIFESMSDRHDHY-----AC 505
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDV 210
+VD+ + G + EA + M+P V
Sbjct: 506 MVDILGQAGRVFEAKELINIMPMEPDAV 533
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 74/141 (52%), Gaps = 9/141 (6%)
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE-----LP 174
+G DEAL++F + P + T ++ ACA G L +G +H +++ N P
Sbjct: 40 RGQIDEALSLFYNAPLPLPHSQQ-TYATLFHACARHGYLQQGIYLHQHLLLNNKNQGNRP 98
Query: 175 LTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFS 234
L + + L++MYAKCG ++ A +F M +V W ++I G+A HG E LFS
Sbjct: 99 LGVFVTNHLINMYAKCGDLEYARQLFAE--MPERNVVSWTALISGYAQHGQAYECSRLFS 156
Query: 235 EMHIVGVKPDEITYLNLLSAC 255
M ++ +P+E + LS+C
Sbjct: 157 SM-LMHCRPNEFALTSNLSSC 176
>29736.m002059 pentatricopeptide repeat-containing protein, putative
Length = 330
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 122/235 (51%), Gaps = 37/235 (15%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
V PD T+PF+ KA A L G +H + K G+ESD +++NSLIH
Sbjct: 126 AVLPDKHTYPFVLKACAYLFALNEGKQVHAQMLKHGFESDVYINNSLIHF---------- 175
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
YA CG A+ VFD MP + ++SW+ +ID V+ G++D
Sbjct: 176 ---------------------YASCGCSEPAQYVFDKMPARSLVSWNAMIDALVQFGEFD 214
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI---DNELPLTLVLRT 181
AL +F +++ +P+ TM SVL ACA L AL G +H Y++ D E+ L +++
Sbjct: 215 AALKLFVQLQ-ELFEPDGYTMQSVLNACAGLCALSLGMWVHAYMLRKFDVEVTLDVLVDN 273
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
L+DMY KCG++ A+ VF M D+ WNSMI GFA HG + + + F M
Sbjct: 274 CLLDMYCKCGSLDIAMQVFER--MHKRDITSWNSMILGFAMHGKAELTFEYFDCM 326
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 5/173 (2%)
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE-ALAVFEEMRVSGPK-PNEV 143
++ D+ A ++F + W+ LI R D E + +++ M G P++
Sbjct: 73 FSSFNDLDYAYRLFSKFDNPNAFMWNTLIRACARSYDRKEQSFLLYKRMIEQGAVLPDKH 132
Query: 144 TMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSG 203
T VL ACA+L AL++G+ +H ++ + + + SL+ YA CG + A +VF
Sbjct: 133 TYPFVLKACAYLFALNEGKQVHAQMLKHGFESDVYINNSLIHFYASCGCSEPAQYVFDK- 191
Query: 204 LMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
M + WN+MI G +L LF ++ + +PD T ++L+ACA
Sbjct: 192 -MPARSLVSWNAMIDALVQFGEFDAALKLFVQLQEL-FEPDGYTMQSVLNACA 242
>29983.m003251 pentatricopeptide repeat-containing protein, putative
Length = 483
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 132/239 (55%), Gaps = 20/239 (8%)
Query: 23 LLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVK----NLVS 78
L++R+LGLA D F +++ + R + ++V + N+V
Sbjct: 244 LMQRKLGLA-----------PDGFTFGTVLTACGNLRRLKQGKEVHAKLITSGFSGNVVV 292
Query: 79 WNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP 138
+S++D Y KCG + +++VFD M ++ +SWS L+ G+ + GD++ + +F EM G
Sbjct: 293 ESSLVDMYGKCGLVDESQRVFDRMSVKNSVSWSALLGGFCQNGDFESVIRIFREM---GE 349
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
+ + +VL ACA L A+ +G+ +H + +++ ++LVD+YAKCG I A
Sbjct: 350 ADDLYSFGTVLRACAGLAAVRQGKEVHCQYVRRGGWRDVIIESALVDLYAKCGCIDFAHR 409
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
+F M ++ WNSMI GFA +G +E+L +F EM G KPD IT++ +L AC+H
Sbjct: 410 IFTK--MTVRNLITWNSMICGFAQNGWAEEALRIFDEMVKEGTKPDYITFIGVLFACSH 466
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 149/316 (47%), Gaps = 36/316 (11%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSF-RDIPNARKVFDGIPVKNLVSWNSMLDGYA 87
GL IH ++ K+G E+DRFV NSL+ +Y D R+VFDG+ ++++SW SM
Sbjct: 70 GLQIHAHVVKSGLETDRFVGNSLLALYFKLSTDFFETRRVFDGLYFRDVISWTSM----- 124
Query: 88 KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
I GYV+ +AL +F EM G PN T+ +
Sbjct: 125 --------------------------ITGYVKGEKPKKALDLFWEMLDVGVDPNAFTLSA 158
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP 207
V+ AC LG L G+ H ++ V+ ++L+D+Y + + +A +F L++P
Sbjct: 159 VIKACTDLGTLMLGKCFHCVIMIRGFHSNHVIGSALIDLYGRNYELDDARRLFDE-LLEP 217
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMH-IVGVKPDEITYLNLLSACAHGGLVKEAWY 266
D W S+I + + + ++L F M +G+ PD T+ +L+AC + +K+
Sbjct: 218 -DAICWTSVISAYTRNDMYDKALGFFYLMQRKLGLAPDGFTFGTVLTACGNLRRLKQGKE 276
Query: 267 FFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
L +G + + +VD+ + G V E+ + ++ ++ + S ALL G +G
Sbjct: 277 VHAKLITSGFSGNVVVESSLVDMYGKCGLVDESQRVFDRMSVKNSVSW-SALLGGFCQNG 335
Query: 327 KLDLAETVGRKLIELE 342
+ + R++ E +
Sbjct: 336 DFESVIRIFREMGEAD 351
>28196.m000208 pentatricopeptide repeat-containing protein, putative
Length = 404
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 145/360 (40%), Gaps = 139/360 (38%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
NSLI++Y+ I +AR VFD +PVK SWN++L GYAK G ++ VFD +P++D +
Sbjct: 2 NSLINLYAKSGYIVDARSVFDEMPVKTTFSWNTILTGYAKLGKLAKTHSVFDEIPDRDSV 61
Query: 109 SWSCLIDGYVRKGDYD-------------------------------------------- 124
SW+ +I GY + G ++
Sbjct: 62 SWTIMIMGYNQMGRFESAIKMFVAMVKDKVLPTQLTITNVFASCAALGALDIGYNQHGFD 121
Query: 125 -EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR--- 180
EAL +F M KP+ T+ SVL ACA+LG + +H Y+I E ++ V++
Sbjct: 122 KEALELFSRMLEDSLKPDRFTLASVLSACANLG-----KQIHSYIIRTEFDISGVVQNAL 176
Query: 181 ------------------------------TSLVDMYAKCGAIQEALHVF---------- 200
T+L+D Y K G I A H+F
Sbjct: 177 ISMCAKTGGVEIAQSVVEQSGISDLNVIAFTALLDGYVKLGNITPARHIFDSLKDRDMVV 236
Query: 201 ----------------RSGLMKP-------------------------SDVFIWNSMIGG 219
+ G + D W SMI
Sbjct: 237 WTAMMFYTSSHVECQFKCGFFESWQTNSCKCHKIRGKFISFGGQCTDYDDTVSWTSMIIA 296
Query: 220 FACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKE-----AWYFFDCLGKN 274
A HGL +ES++LF +M +G+KPD ITY+ +LSAC H GLV++ A Y FD G+
Sbjct: 297 LAQHGLGQESIELFEKMLALGIKPDHITYVGVLSACTHVGLVEQGRGGDATYLFDICGQQ 356
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 60/217 (27%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML + PD T + A A LG IH YI + ++ V N+LI M +
Sbjct: 131 MLEDSLKPDRFTLASVLSACA-----NLGKQIHSYIIRTEFDISGVVQNALISMCAKTGG 185
Query: 61 IPNARKVFD--GIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ------------- 105
+ A+ V + GI N++++ ++LDGY K G+I+ AR +FD + ++
Sbjct: 186 VEIAQSVVEQSGISDLNVIAFTALLDGYVKLGNITPARHIFDSLKDRDMVVWTAMMFYTS 245
Query: 106 ----------------------------------------DVLSWSCLIDGYVRKGDYDE 125
D +SW+ +I + G E
Sbjct: 246 SHVECQFKCGFFESWQTNSCKCHKIRGKFISFGGQCTDYDDTVSWTSMIIALAQHGLGQE 305
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR 162
++ +FE+M G KP+ +T V VL AC H+G +++GR
Sbjct: 306 SIELFEKMLALGIKPDHITYVGVLSACTHVGLVEQGR 342
>30174.m008630 pentatricopeptide repeat-containing protein, putative
Length = 478
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 128/251 (50%), Gaps = 33/251 (13%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D TF + + A L ELG IHG I K ++ D V++ +++MY+ I +ARK
Sbjct: 220 DGFTFSSMLNSCATLGSWELGRQIHGLICKLSFDLDILVASGIVNMYAKNEYIEDARKA- 278
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
FD M ++V+SW+ ++ Y R+GD EA+
Sbjct: 279 ------------------------------FDCMTAKNVVSWNTMVVAYGRQGDGKEAMK 308
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
+ +EM + P+E+T+ S+L +C + A + +H YV+ L L + ++++ Y+
Sbjct: 309 LLKEMLLEDFAPDELTLASILSSCGSVSASCEIMQVHVYVVKFGLQSFLSIGNAMINAYS 368
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
KCG AL F S + ++ W S+I G+A + L K+ + +F +M GV+PD+I +
Sbjct: 369 KCGRAASALKSFNS--VPEPNLVTWTSLISGYAFNSLPKDGIKMFEKMLSAGVRPDQIAF 426
Query: 249 LNLLSACAHGG 259
L +LSAC+H G
Sbjct: 427 LGVLSACSHAG 437
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 141/313 (45%), Gaps = 34/313 (10%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D +T L +A L E+G +H + K G++ + V+++L+ +Y AR VF
Sbjct: 119 DPITLNVLFRACLELNGIEIGRQLHCLVVKLGFQLNCLVNSALVDLYGKCGLATEARCVF 178
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
D + K+LV WN ML YA + + E EAL
Sbjct: 179 DDVMYKDLVLWNVMLSCYA-----------LNSLAE--------------------EALT 207
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
VF+ M++ + T S+L +CA LG+ + GR +H + L +++ + +V+MYA
Sbjct: 208 VFKLMQLENLIGDGFTFSSMLNSCATLGSWELGRQIHGLICKLSFDLDILVASGIVNMYA 267
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
K I++A F M +V WN+M+ + G KE++ L EM + PDE+T
Sbjct: 268 KNEYIEDARKAFDC--MTAKNVVSWNTMVVAYGRQGDGKEAMKLLKEMLLEDFAPDELTL 325
Query: 249 LNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPI 308
++LS+C E + K G+ M++ ++ G+ A A + +P
Sbjct: 326 ASILSSCGSVSASCEIMQVHVYVVKFGLQSFLSIGNAMINAYSKCGRAASALKSFNSVP- 384
Query: 309 QPTASMLGALLNG 321
+P +L++G
Sbjct: 385 EPNLVTWTSLISG 397
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 117/231 (50%), Gaps = 28/231 (12%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G+ +H ++ K G + + N ++ +Y ++ +A K+FD + V+N+V+WN+++ G
Sbjct: 33 GIQVHAHLVKLGLYNVLSLQNKILDVYVKCKEFKDAHKLFDEMTVRNVVTWNTVICGLVN 92
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
CG+ + P CL G+ + F++M + + +T+ +
Sbjct: 93 CGN--------NYKP--------CLYTGF----------SYFKKMLLDEVGFDPITLNVL 126
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
AC L ++ GR +H V+ L ++ ++LVD+Y KCG EA VF + K
Sbjct: 127 FRACLELNGIEIGRQLHCLVVKLGFQLNCLVNSALVDLYGKCGLATEARCVFDDVMYK-- 184
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
D+ +WN M+ +A + L +E+L +F M + + D T+ ++L++CA G
Sbjct: 185 DLVLWNVMLSCYALNSLAEEALTVFKLMQLENLIGDGFTFSSMLNSCATLG 235
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 31/149 (20%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD LT + + + + +H Y+ K G +S + N++I+ YS +A K
Sbjct: 320 PDELTLASILSSCGSVSASCEIMQVHVYVVKFGLQSFLSIGNAMINAYSKCGRAASALKS 379
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
F+ +P NLV+W S++ GYA F+ +P+ + +
Sbjct: 380 FNSVPEPNLVTWTSLISGYA-----------FNSLPK--------------------DGI 408
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLG 156
+FE+M +G +P+++ + VL AC+H G
Sbjct: 409 KMFEKMLSAGVRPDQIAFLGVLSACSHAG 437
>30169.m006528 pentatricopeptide repeat-containing protein, putative
Length = 567
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 129/227 (56%), Gaps = 3/227 (1%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
E + + N ++ YS + +++ +F+ +P K ++S N+M+ Y++ G++ A +F+
Sbjct: 329 EKNSALCNLMVKAYSMSGRVEDSKTLFEKMPQKTIISSNTMISVYSRNGELDKALMLFEQ 388
Query: 102 MPEQ-DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK 160
+Q + ++W+ ++ GYV+ ++EAL ++ M+ S T + AC+++G+L +
Sbjct: 389 TKDQRNPVTWNSMLSGYVQNEQHEEALKLYVTMKRSSVDCTRSTFSVLFRACSYIGSLQQ 448
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
G+M+H +I + + TSLVDMY+KCG+I +A F S + +V W ++I G+
Sbjct: 449 GKMLHANLIKTPFASNVYVGTSLVDMYSKCGSIFDAKKSFSS--ISAPNVAAWTALINGY 506
Query: 221 ACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYF 267
A HG E++ LF M V P+ T++ +L+AC GL EA F
Sbjct: 507 AHHGFGSEAILLFQHMLEQKVVPNGATFVGILTACDRAGLTAEAVPF 553
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 158/325 (48%), Gaps = 16/325 (4%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKREL--GLAIHGYITKAGYESDRFVSNSLIHMYSSF 58
M R D TF + S C + G IH + K+G S V + L++ Y +
Sbjct: 92 MHRSNTQLDETTFSTIL--SVCTRTQSFCDGKQIHCLVLKSGCGSFELVGSVLLYFYGNC 149
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
I +A++VFD + KN V W+SM+ Y + G ++ A +F MP+++V+SWS LI GY
Sbjct: 150 SQIDDAKRVFDELHDKNEVVWSSMVVCYVQRGLLTDAYDLFVKMPKKEVVSWSKLISGYA 209
Query: 119 RKGDYDE-ALAVFEEMRVSGPK-PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
+ E AL +F+ MR SG PNE T+ SV+ C LGAL +G ++H +I
Sbjct: 210 KSEVRSEKALELFQLMRESGEVLPNEFTLDSVIRVCGKLGALSEGMVVHGILIKTGFEFD 269
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
+ +LV Y C AI +A ++ G+ P NS+I G+ G +K++ +F+
Sbjct: 270 QSISGALVQFYCDCEAIDDAKRIY-DGIAYPCSS-ASNSLIEGYVLLGRIKDADLIFNR- 326
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQV 296
K + L ++ A + G V+++ F+ + + + + M+ V +R G++
Sbjct: 327 --ATEKNSALCNL-MVKAYSMSGRVEDSKTLFEKMPQKTIISSNT----MISVYSRNGEL 379
Query: 297 AEAYQFLCQIPIQPTASMLGALLNG 321
+A Q Q ++L+G
Sbjct: 380 DKALMLFEQTKDQRNPVTWNSMLSG 404
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 118/249 (47%), Gaps = 11/249 (4%)
Query: 77 VSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVS 136
VS N + YA G + AR +FD MP++ +SW+ +I Y++ G + E+ ++ M S
Sbjct: 36 VSTNIAITRYAIKGQLDFARCLFDKMPQRTSVSWNTMISSYLKWGKFKESFSLLSLMHRS 95
Query: 137 GPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEA 196
+ +E T ++L C + G+ +H V+ + ++ + L+ Y C I +A
Sbjct: 96 NTQLDETTFSTILSVCTRTQSFCDGKQIHCLVLKSGCGSFELVGSVLLYFYGNCSQIDDA 155
Query: 197 LHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
VF + + +W+SM+ + GL+ ++ DLF +M K + +++ L+S A
Sbjct: 156 KRVFDE--LHDKNEVVWSSMVVCYVQRGLLTDAYDLFVKMP----KKEVVSWSKLISGYA 209
Query: 257 HGGLVKE-AWYFFDCLGKNG-MTPKSEHYACMVDVMARAGQVAEA---YQFLCQIPIQPT 311
+ E A F + ++G + P ++ V + G ++E + L + +
Sbjct: 210 KSEVRSEKALELFQLMRESGEVLPNEFTLDSVIRVCGKLGALSEGMVVHGILIKTGFEFD 269
Query: 312 ASMLGALLN 320
S+ GAL+
Sbjct: 270 QSISGALVQ 278
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 64/156 (41%), Gaps = 31/156 (19%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R V TF L +A + + + G +H + K + S+ +V SL+ MYS
Sbjct: 421 MKRSSVDCTRSTFSVLFRACSYIGSLQQGKMLHANLIKTPFASNVYVGTSLVDMYSKCGS 480
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I +A+K F I N+ +W ++++GYA G S A +F M EQ V+
Sbjct: 481 IFDAKKSFSSISAPNVAAWTALINGYAHHGFGSEAILLFQHMLEQKVV------------ 528
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLG 156
PN T V +L AC G
Sbjct: 529 -------------------PNGATFVGILTACDRAG 545
>29841.m002773 pentatricopeptide repeat-containing protein, putative
Length = 653
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 128/259 (49%), Gaps = 34/259 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML + V PD +T + A L LG IHGY+ + GY +D V + LI MY+S
Sbjct: 295 MLELSVDPDLMTMTSVISACELLGDDRLGREIHGYVVRTGYGNDVSVHSLLIQMYASLGY 354
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
A KVF +++VSW +M+ GY +LM
Sbjct: 355 WKEAEKVFSETECRDVVSWTAMISGYEG-----------NLM------------------ 385
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+D+AL ++ M ++G P+E+T+ VL ACA LG LD G +H L +++
Sbjct: 386 --HDKALETYKNMELAGIVPDEITIACVLSACASLGQLDLGMRLHELANRMGLMSFVIVA 443
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
SL+DMY+KC I +AL VF ++ +V W S+I G + E+L F +M
Sbjct: 444 NSLIDMYSKCKCIDKALEVFHC--IQDKNVISWTSIILGLRINNRSFEALSFFRKMK-RN 500
Query: 241 VKPDEITYLNLLSACAHGG 259
+KP+ IT +++LSACA G
Sbjct: 501 LKPNSITLISVLSACARIG 519
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 124/259 (47%), Gaps = 33/259 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML VG+ PD TFP + ++ G IH ++ + G+E+D N+LI MY
Sbjct: 194 MLWVGIKPDIYTFPCVLRSCGGANDFIRGKEIHCHVIRFGFETDVSAVNALITMY----- 248
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
KCG + AR VFD M ++D +SW+ +I GY
Sbjct: 249 --------------------------VKCGCVGSARTVFDKMLQRDRISWNAMISGYFEN 282
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G+ E L +F +M P+ +TM SV+ AC LG GR +H YV+ + +
Sbjct: 283 GECVEGLNLFLQMLELSVDPDLMTMTSVISACELLGDDRLGREIHGYVVRTGYGNDVSVH 342
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+ L+ MYA G +EA VF + DV W +MI G+ + + ++L+ + M + G
Sbjct: 343 SLLIQMYASLGYWKEAEKVFSE--TECRDVVSWTAMISGYEGNLMHDKALETYKNMELAG 400
Query: 241 VKPDEITYLNLLSACAHGG 259
+ PDEIT +LSACA G
Sbjct: 401 IVPDEITIACVLSACASLG 419
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 95/176 (53%), Gaps = 2/176 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N++L Y + D++ A VF M E+++ SW+ L+ GY + G +DEAL ++ M G K
Sbjct: 141 NALLSMYVRFSDLNNAWNVFGRMGERNLFSWNVLVGGYAKAGFFDEALCLYHRMLWVGIK 200
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
P+ T VL +C +G+ +H +VI + +L+ MY KCG + A V
Sbjct: 201 PDIYTFPCVLRSCGGANDFIRGKEIHCHVIRFGFETDVSAVNALITMYVKCGCVGSARTV 260
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC 255
F L + D WN+MI G+ +G E L+LF +M + V PD +T +++SAC
Sbjct: 261 FDKMLQR--DRISWNAMISGYFENGECVEGLNLFLQMLELSVDPDLMTMTSVISAC 314
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N++LD Y +CG + +A F+L E DV +W+ L+ GY +G A+ +F +M S
Sbjct: 544 NAILDMYVRCGKLGLALNQFNLYKE-DVAAWNILMRGYAEQGQGAMAVELFHKMIESKVN 602
Query: 140 PNEVTMVSVLCACAHLGALDKGR 162
P++VT +++LCAC+ G +++ +
Sbjct: 603 PDDVTYIALLCACSRSGMVEEAK 625
>27538.m000322 pentatricopeptide repeat-containing protein, putative
Length = 548
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 155/298 (52%), Gaps = 16/298 (5%)
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
E L + EE RV P + ++ + C A ++ +++H +++ + PL + ++
Sbjct: 219 EVLNLLEERRVLVDLPRFLQLMRI---CGEAKASEEAKVVHDHLVRLQSPLAVSTFNKIL 275
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
+MY KCG + A VF M ++ W++MI A +GL ++++DLFS+ G+ PD
Sbjct: 276 EMYGKCGDMDSAFAVFNK--MPKRNLTTWDTMIAWLAKNGLGEDAIDLFSQFKQAGLVPD 333
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFL 303
++ + SAC G V E F+ + K+ G+ P EH+ +VD++ G + EA +F+
Sbjct: 334 AQLFIGVFSACGVVGDVIEGMLHFESMKKDYGIVPSMEHFVSIVDMLGTIGHLDEALEFI 393
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWD 363
++P++P+ + +L+N HG L+L + KL+EL D ++ + +
Sbjct: 394 EKMPMEPSIDVWESLMNLSRIHGNLELGDRCA-KLVEL---LDASHLNEQSKAGLVPA-- 447
Query: 364 KARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKH 421
K ++ + + KK + +E+ +H + A D SHP +++IY ML + +QMK
Sbjct: 448 KVSNLTKEKD----KKPASQNLLEVRSRVHEYRAGDTSHPETDRIYAMLRGLRAQMKE 501
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 78 SWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG 137
++N +L+ Y KCGD+ A VF+ MP++++ +W +I + G ++A+ +F + + +G
Sbjct: 270 TFNKILEMYGKCGDMDSAFAVFNKMPKRNLTTWDTMIAWLAKNGLGEDAIDLFSQFKQAG 329
Query: 138 PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR--TSLVDMYAKCGAIQE 195
P+ + V AC +G + +G M+H + + + + S+VDM G + E
Sbjct: 330 LVPDAQLFIGVFSACGVVGDVIEG-MLHFESMKKDYGIVPSMEHFVSIVDMLGTIGHLDE 388
Query: 196 ALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
AL M+PS + +W S++ HG
Sbjct: 389 ALEFIEKMPMEPS-IDVWESLMNLSRIHG 416
>29912.m005398 pentatricopeptide repeat-containing protein, putative
Length = 885
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 154/320 (48%), Gaps = 46/320 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML G+ P+ TF + ++ + LL G +H +I K + + FV +LI MY+ R
Sbjct: 488 MLMEGLVPNLYTFVGVLRSCSSLLNVWFGKQVHAHIIKNSLDGNDFVGTALIDMYAKNRC 547
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +A D++ F+ + +D+ +W+ +I G+ +
Sbjct: 548 LEDA--------------------------DVA-----FNKLTNRDLFTWTVIIAGHSQT 576
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
++A+ +M G KPNE T+ S L C+ + L G+ +H I + + +
Sbjct: 577 DKAEKAVKYLGQMLREGIKPNEFTLASCLSGCSRMATLGNGQQLHSLAIKSGHSGDVFVS 636
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
++LVDMY KCG +++A +F+ GL D WN++I G++ HG +++L+ F M
Sbjct: 637 SALVDMYGKCGCMEDAEAIFK-GLF-SRDTVAWNTIICGYSQHGQGQKALEAFRMMLDED 694
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARA------- 293
+ PDE+T++ +L+AC++ G V+E FD + K+ + + D++ A
Sbjct: 695 IDPDEVTFIGVLAACSYMGWVEEGKKHFDLMSKSLCSEQLSQLETSWDILIDALRWPLFQ 754
Query: 294 ------GQVAEAYQFLCQIP 307
GQ A +++ +IP
Sbjct: 755 CHSCGYGQTAVSFEKPLRIP 774
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 148/321 (46%), Gaps = 34/321 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + + P+ T + KAS+ + G IH K G D FV ++L+ +Y+ F
Sbjct: 185 MRKENICPNEFTLATVLKASSMCSDIKFGKLIHLEAIKTGLLLDLFVGSALVDLYAKF-- 242
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
G++ +A +VF MPE++ +SW+ L++GY ++
Sbjct: 243 -----------------------------GEMELADRVFFGMPEKNNVSWNALLNGYAQR 273
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
GD L +F M T+ +VL CA+ G L +G+ +H I L L
Sbjct: 274 GDGKNVLKLFCRMLECEMNFTNYTLSTVLKGCANSGNLREGKALHSLSIRRAYELDEFLG 333
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+LVDMY+KCG EAL VF +++ D+ W+++I G G +E+ +LF M G
Sbjct: 334 CNLVDMYSKCGMAYEALKVFN--MIEEPDIVAWSAIITGLDQQGHSQEAAELFHLMRQKG 391
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
V+P++ ++ +++SA + G + C+ K G + ++ + ++G V +
Sbjct: 392 VRPNQFSFASVISAATNVGDLYLGQSIHCCICKYGYESDNSVGNALITMYMKSGFVQDGI 451
Query: 301 QFLCQIPIQPTASMLGALLNG 321
+ + + S ALL+G
Sbjct: 452 RVFDTMTNRDLVSW-NALLSG 471
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 139/301 (46%), Gaps = 37/301 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMY--SSF 58
M + GV P+ +F + A+ + LG +IH I K GYESD V N+LI MY S F
Sbjct: 387 MRQKGVRPNQFSFASVISAATNVGDLYLGQSIHCCICKYGYESDNSVGNALITMYMKSGF 446
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
V DGI +VFD M +D++SW+ L+ G+
Sbjct: 447 --------VQDGI-------------------------RVFDTMTNRDLVSWNALLSGFY 473
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
D+ L +F +M + G PN T V VL +C+ L + G+ +H ++I N L
Sbjct: 474 DFETSDQGLRIFCQMLMEGLVPNLYTFVGVLRSCSSLLNVWFGKQVHAHIIKNSLDGNDF 533
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+ T+L+DMYAK +++A F + D+F W +I G + ++++ +M
Sbjct: 534 VGTALIDMYAKNRCLEDADVAFNK--LTNRDLFTWTVIIAGHSQTDKAEKAVKYLGQMLR 591
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAE 298
G+KP+E T + LS C+ + K+G + + +VD+ + G + +
Sbjct: 592 EGIKPNEFTLASCLSGCSRMATLGNGQQLHSLAIKSGHSGDVFVSSALVDMYGKCGCMED 651
Query: 299 A 299
A
Sbjct: 652 A 652
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 138/299 (46%), Gaps = 36/299 (12%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G AIHG + K+G E D + W S+++ YAK
Sbjct: 112 GTAIHGNVIKSGLEPDSHL-------------------------------WVSLINLYAK 140
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
CG ++ AR+V M E+DV+SW+ LI GYV +G + + + EMR PNE T+ +V
Sbjct: 141 CGSLAFARKVLVGMRERDVVSWTALIAGYVSEGCGSDGVKAYCEMRKENICPNEFTLATV 200
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
L A + + G+++H I L L L + ++LVD+YAK G ++ A VF G+ + +
Sbjct: 201 LKASSMCSDIKFGKLIHLEAIKTGLLLDLFVGSALVDLYAKFGEMELADRVFF-GMPEKN 259
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFF 268
+V WN+++ G+A G K L LF M + T +L CA+ G ++E
Sbjct: 260 NV-SWNALLNGYAQRGDGKNVLKLFCRMLECEMNFTNYTLSTVLKGCANSGNLREGKALH 318
Query: 269 DCLGKNGMTPKSEHYAC-MVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
L E C +VD+ ++ G EA + I +P A++ G G
Sbjct: 319 S-LSIRRAYELDEFLGCNLVDMYSKCGMAYEALKVFNMIE-EPDIVAWSAIITGLDQQG 375
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 98/176 (55%), Gaps = 2/176 (1%)
Query: 81 SMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKP 140
+++D Y+KCG A +VF+++ E D+++WS +I G ++G EA +F MR G +P
Sbjct: 335 NLVDMYSKCGMAYEALKVFNMIEEPDIVAWSAIITGLDQQGHSQEAAELFHLMRQKGVRP 394
Query: 141 NEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF 200
N+ + SV+ A ++G L G+ +H + + +L+ MY K G +Q+ + VF
Sbjct: 395 NQFSFASVISAATNVGDLYLGQSIHCCICKYGYESDNSVGNALITMYMKSGFVQDGIRVF 454
Query: 201 RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
+ M D+ WN+++ GF + L +F +M + G+ P+ T++ +L +C+
Sbjct: 455 DT--MTNRDLVSWNALLSGFYDFETSDQGLRIFCQMLMEGLVPNLYTFVGVLRSCS 508
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 3/175 (1%)
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVF 211
CA G L++G +H VI + L L SL+++YAKCG++ A V M+ DV
Sbjct: 103 CASKGNLNEGTAIHGNVIKSGLEPDSHLWVSLINLYAKCGSLAFARKVLVG--MRERDVV 160
Query: 212 IWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL 271
W ++I G+ G + + + EM + P+E T +L A + +K
Sbjct: 161 SWTALIAGYVSEGCGSDGVKAYCEMRKENICPNEFTLATVLKASSMCSDIKFGKLIHLEA 220
Query: 272 GKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
K G+ + +VD+ A+ G++ A + +P + S ALLNG G
Sbjct: 221 IKTGLLLDLFVGSALVDLYAKFGEMELADRVFFGMPEKNNVSW-NALLNGYAQRG 274
>29950.m001146 pentatricopeptide repeat-containing protein, putative
Length = 878
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 131/273 (47%), Gaps = 33/273 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML G+ D++ F A A + G IH +GY D + N+L+ +Y
Sbjct: 584 MLNRGIQSDNIGFSSAISACAGIQALSQGQQIHAQSYISGYSEDLSIGNALVSLY----- 638
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
A+CG I A F+ + +D +SW+ L+ G+ +
Sbjct: 639 --------------------------ARCGRIQEANLAFEKIDAKDSISWNALMSGFAQS 672
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +EAL +F +M + K + T S + A A++ + +G+ +H ++ + +
Sbjct: 673 GYCEEALKIFAQMTRANIKASLFTFGSAVSAAANMANIKQGKQIHAMIMKTGFDSEIEVS 732
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+ +YAKCG I A F + + WN+MI G++ HG E+++LF +M VG
Sbjct: 733 NALITLYAKCGCIDGAKREFFE--IPEKNEISWNAMITGYSQHGCGIEAVNLFQKMKQVG 790
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK 273
KP+ +T++ ++SAC+H GLV E +F+ + K
Sbjct: 791 AKPNHVTFVGVISACSHVGLVNEGLAYFESMSK 823
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 137/319 (42%), Gaps = 34/319 (10%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD +T L A A + G +H Y KAG D + SL+ +Y DI A K
Sbjct: 389 PDCVTVASLLSACASIKSLSKGEQLHSYAIKAGMCLDIIIEGSLLDLYVKCSDITTAHKF 448
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
F +N+V WN ML Y + ++S ++
Sbjct: 449 FATTQTENVVLWNVMLVAYGQLDNLS-------------------------------KSF 477
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+F +M++ G PN+ T S+L C GALD G +H I + + + L+DMY
Sbjct: 478 CIFRQMQIEGLIPNQFTYPSILRTCTSFGALDLGEQIHSQAIKTGFEFNVYVCSVLIDMY 537
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
AK G + A + R + DV W ++I G+ H L E+L+LF EM G++ D I
Sbjct: 538 AKLGKLDIARGILRR--LNEEDVVSWTALIAGYTQHDLFTEALNLFDEMLNRGIQSDNIG 595
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
+ + +SACA + + +G + +V + AR G++ EA +I
Sbjct: 596 FSSAISACAGIQALSQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRIQEANLAFEKID 655
Query: 308 IQPTASMLGALLNGCMNHG 326
+ + S AL++G G
Sbjct: 656 AKDSISW-NALMSGFAQSG 673
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 147/322 (45%), Gaps = 34/322 (10%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ P+ T+P + + +LG IH K G+E + +V + LI MY+ + A
Sbjct: 487 GLIPNQFTYPSILRTCTSFGALDLGEQIHSQAIKTGFEFNVYVCSVLIDMYAKLGKLDIA 546
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
R + + +++VSW +++ GY + DL +
Sbjct: 547 RGILRRLNEEDVVSWTALIAGYTQ----------HDL---------------------FT 575
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
EAL +F+EM G + + + S + ACA + AL +G+ +H + L + +LV
Sbjct: 576 EALNLFDEMLNRGIQSDNIGFSSAISACAGIQALSQGQQIHAQSYISGYSEDLSIGNALV 635
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
+YA+CG IQEA F + D WN+++ GFA G +E+L +F++M +K
Sbjct: 636 SLYARCGRIQEANLAFEK--IDAKDSISWNALMSGFAQSGYCEEALKIFAQMTRANIKAS 693
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLC 304
T+ + +SA A+ +K+ + K G + E ++ + A+ G + A +
Sbjct: 694 LFTFGSAVSAAANMANIKQGKQIHAMIMKTGFDSEIEVSNALITLYAKCGCIDGAKREFF 753
Query: 305 QIPIQPTASMLGALLNGCMNHG 326
+IP + S A++ G HG
Sbjct: 754 EIPEKNEISW-NAMITGYSQHG 774
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 149/321 (46%), Gaps = 34/321 (10%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ P F + A A + ++G +H + K G+ + +V N+L+ +YS
Sbjct: 285 GLSPTPYVFSSVLSACAKIELFDIGEQLHALVFKCGFFLETYVCNALVTLYS-------- 336
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
+ G+ A+QVF + +D +S++ LI G ++G D
Sbjct: 337 -----------------------RLGNFISAQQVFSKIKCKDEVSYNSLISGLSQQGCSD 373
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
AL +F++M++ KP+ VT+ S+L ACA + +L KG +H Y I + L +++ SL+
Sbjct: 374 RALELFKKMQLDHLKPDCVTVASLLSACASIKSLSKGEQLHSYAIKAGMCLDIIIEGSLL 433
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
D+Y KC I A F + + +V +WN M+ + + +S +F +M I G+ P+
Sbjct: 434 DLYVKCSDITTAHKFFAT--TQTENVVLWNVMLVAYGQLDNLSKSFCIFRQMQIEGLIPN 491
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLC 304
+ TY ++L C G + K G + ++D+ A+ G++ A L
Sbjct: 492 QFTYPSILRTCTSFGALDLGEQIHSQAIKTGFEFNVYVCSVLIDMYAKLGKLDIARGILR 551
Query: 305 QIPIQPTASMLGALLNGCMNH 325
++ + S AL+ G H
Sbjct: 552 RLNEEDVVSWT-ALIAGYTQH 571
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 144/328 (43%), Gaps = 39/328 (11%)
Query: 77 VSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVS 136
++ N ++D YAK G I AR+VFD + +D +SW +I Y + G +EA+ +F EM +S
Sbjct: 225 IACNPLIDLYAKNGFIRSARKVFDELCMKDSVSWVAVISSYSQNGFGEEAIRLFCEMHIS 284
Query: 137 GPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEA 196
G P SVL ACA + D G +H V L + +LV +Y++ G A
Sbjct: 285 GLSPTPYVFSSVLSACAKIELFDIGEQLHALVFKCGFFLETYVCNALVTLYSRLGNFISA 344
Query: 197 LHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
VF +K D +NS+I G + G +L+LF +M + +KPD +T +LLSACA
Sbjct: 345 QQVFSK--IKCKDEVSYNSLISGLSQQGCSDRALELFKKMQLDHLKPDCVTVASLLSACA 402
Query: 257 HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLC------------ 304
+ + K GM ++D+ + + A++F
Sbjct: 403 SIKSLSKGEQLHSYAIKAGMCLDIIIEGSLLDLYVKCSDITTAHKFFATTQTENVVLWNV 462
Query: 305 -------------------QIPIQ---PTASMLGALLNGCMNHGKLDLAETVGRKLIELE 342
Q+ I+ P ++L C + G LDL E + + I+
Sbjct: 463 MLVAYGQLDNLSKSFCIFRQMQIEGLIPNQFTYPSILRTCTSFGALDLGEQIHSQAIK-T 521
Query: 343 PHQDGRYVG--LSNVYAIFRRWDKARSM 368
+ YV L ++YA + D AR +
Sbjct: 522 GFEFNVYVCSVLIDMYAKLGKLDIARGI 549
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 127/268 (47%), Gaps = 8/268 (2%)
Query: 74 KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM 133
K V + +++ Y GD++ +VFD MP + +++W+ ++ G V + L +F +M
Sbjct: 120 KESVLCDKLIEFYFAVGDLNSVVKVFDDMPSRSLMTWNKVLSGLVANKTSNRVLGLFAQM 179
Query: 134 RVSGPKPNEVTMVSVLCACAHLG-ALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
PNEVT+ SVL A A +H +I L + + L+D+YAK G
Sbjct: 180 VEENVNPNEVTVASVLRAYGSGNVAFYYVEQIHASIISRGLGTSSIACNPLIDLYAKNGF 239
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
I+ A VF MK D W ++I ++ +G +E++ LF EMHI G+ P + ++L
Sbjct: 240 IRSARKVFDELCMK--DSVSWVAVISSYSQNGFGEEAIRLFCEMHISGLSPTPYVFSSVL 297
Query: 253 SACAHGGLVKEAWYFFDCLGKNGMTPKSEHYAC--MVDVMARAGQVAEAYQFLCQIPIQP 310
SACA L + K G E Y C +V + +R G A Q +I +
Sbjct: 298 SACAKIELFDIGEQLHALVFKCGFFL--ETYVCNALVTLYSRLGNFISAQQVFSKIKCKD 355
Query: 311 TASMLGALLNGCMNHGKLDLAETVGRKL 338
S +L++G G D A + +K+
Sbjct: 356 EVSY-NSLISGLSQQGCSDRALELFKKM 382
>29844.m003278 pentatricopeptide repeat-containing protein, putative
Length = 463
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 126/260 (48%), Gaps = 34/260 (13%)
Query: 3 RVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIP 62
R G PD TF A A L +LG +HG++ ++G+E
Sbjct: 202 RAGCEPDSTTFCVFFNACADQLYVDLGRQLHGFVIRSGFE-------------------- 241
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
K++ N ++D Y KC ++ +A VF M ++ +SW ++ + G+
Sbjct: 242 -----------KSVSVLNGLIDFYGKCKEVRLAEMVFGKMENRNAVSWCSMVAACEQNGE 290
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTS 182
++A F E R G +P + + SV+ ACA L L+ GR H + L + + ++
Sbjct: 291 EEKACLFFVEGRKEGIEPTDYMVSSVISACAGLAGLELGRSFHALAVKACLEGDIFVGSA 350
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
LVDMY KCG I+++ F M ++ WN++IGG+A G + ++ LF EM V
Sbjct: 351 LVDMYGKCGGIEDSEQAFHE--MSERNLVTWNALIGGYAHQGHAEMAVRLFKEM-TTEVV 407
Query: 243 PDEITYLNLLSACAHGGLVK 262
P+ +T + +LSAC GG V+
Sbjct: 408 PNYVTLVCVLSACGRGGAVE 427
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 115/256 (44%), Gaps = 33/256 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R + P+ TFP KASA LL +G IH K G +D FV S MYS
Sbjct: 99 MRRDNIQPNDFTFPCAFKASASLLLPFVGKQIHAIAVKFGQINDVFVGCSAFDMYS---- 154
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
K G A+++FD +PE++V++W+ I V
Sbjct: 155 ---------------------------KTGLKQDAQKLFDELPERNVVTWNAYISNAVLY 187
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G Y A F E+R +G +P+ T ACA +D GR +H +VI + ++ +
Sbjct: 188 GRYQNAAVAFVELRRAGCEPDSTTFCVFFNACADQLYVDLGRQLHGFVIRSGFEKSVSVL 247
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
L+D Y KC ++ A VF G M+ + W SM+ +G +++ F E G
Sbjct: 248 NGLIDFYGKCKEVRLAEMVF--GKMENRNAVSWCSMVAACEQNGEEEKACLFFVEGRKEG 305
Query: 241 VKPDEITYLNLLSACA 256
++P + +++SACA
Sbjct: 306 IEPTDYMVSSVISACA 321
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 97/231 (41%), Gaps = 36/231 (15%)
Query: 28 LGLAIHGYITKAGYESD--RFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDG 85
LG A H I K ++S F+SN LI MYS D+PN+
Sbjct: 24 LGRATHARIIKT-FQSPLPPFLSNHLISMYSKL-DLPNS--------------------- 60
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
A+ V L P + V++W+ LI G V+ G + AL F MR +PN+ T
Sbjct: 61 ---------AQLVLHLTPTRSVVTWTSLISGSVQNGHFSFALYHFFNMRRDNIQPNDFTF 111
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
A A L G+ +H + + + S DMY+K G Q+A +F +
Sbjct: 112 PCAFKASASLLLPFVGKQIHAIAVKFGQINDVFVGCSAFDMYSKTGLKQDAQKLFDE--L 169
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
+V WN+ I +G + + F E+ G +PD T+ +ACA
Sbjct: 170 PERNVVTWNAYISNAVLYGRYQNAAVAFVELRRAGCEPDSTTFCVFFNACA 220
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 70/157 (44%), Gaps = 32/157 (20%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ P + A A L ELG + H KA E D FV ++L+ MY
Sbjct: 305 GIEPTDYMVSSVISACAGLAGLELGRSFHALAVKACLEGDIFVGSALVDMY--------- 355
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
KCG I + Q F M E+++++W+ LI GY +G +
Sbjct: 356 ----------------------GKCGGIEDSEQAFHEMSERNLVTWNALIGGYAHQGHAE 393
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
A+ +F+EM + PN VT+V VL AC GA++ G
Sbjct: 394 MAVRLFKEM-TTEVVPNYVTLVCVLSACGRGGAVELG 429
>29751.m001865 pentatricopeptide repeat-containing protein, putative
Length = 383
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 107/191 (56%), Gaps = 2/191 (1%)
Query: 73 VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEE 132
V N N +L YAK GD+ A FD + ++ ++SW+ +I GYV+ G + L+++ +
Sbjct: 40 VANEYLKNKLLILYAKSGDLKTAHMFFDNLMDKSLISWNAMIAGYVQSGLEEIGLSLYYK 99
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
MR +G P++ T S ACA L L G+ H +I L +V+ ++L+DMY KC +
Sbjct: 100 MRQNGLTPDQYTFASAFRACAALATLQHGKKAHGVMIKCNLRENVVVNSALIDMYFKCSS 159
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
+ + F + + ++ W S+I G+ HG V E L+ F M G +P+ +T+L L
Sbjct: 160 LTDGHKAFNKSVNR--NIVTWTSLISGYGQHGRVTEVLESFHRMKDEGFRPNYVTFLAAL 217
Query: 253 SACAHGGLVKE 263
AC+HGGL+ E
Sbjct: 218 CACSHGGLIDE 228
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 76/139 (54%), Gaps = 6/139 (4%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVK-----NLVSWNS 81
E+GL+++ + + G D++ S ++ + + +K G+ +K N+V ++
Sbjct: 91 EIGLSLYYKMRQNGLTPDQYTFASAFRACAALATLQHGKKAH-GVMIKCNLRENVVVNSA 149
Query: 82 MLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN 141
++D Y KC ++ + F+ +++++W+ LI GY + G E L F M+ G +PN
Sbjct: 150 LIDMYFKCSSLTDGHKAFNKSVNRNIVTWTSLISGYGQHGRVTEVLESFHRMKDEGFRPN 209
Query: 142 EVTMVSVLCACAHLGALDK 160
VT ++ LCAC+H G +D+
Sbjct: 210 YVTFLAALCACSHGGLIDE 228
>29825.m000324 pentatricopeptide repeat-containing protein, putative
Length = 567
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 116/191 (60%), Gaps = 5/191 (2%)
Query: 82 MLDGYAKCGDISM-ARQVFDLMPEQDVLSWSCLIDGYVRKGDY-DEALAVFEEMRVSGPK 139
++D YAKCG + R++F + E D++ W+ +I Y + +E L F M+ +G +
Sbjct: 282 LVDLYAKCGGGMLDCRKIFVEIREPDLVLWNTMISAYSLDEELSEETLDCFRRMQRAGFR 341
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV-LRTSLVDMYAKCGAIQEALH 198
P++ + V V+ AC++L + +G+ +H + +E+P + + +LV MY+KCG +Q+A
Sbjct: 342 PDDCSFVCVIRACSNLSSPSQGKQIHAMTVKSEIPSNQISVNNALVAMYSKCGNLQDARR 401
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHG 258
+F M + +NS+I G+A HG+ ESL LF +M +G+ P IT++++LSACAH
Sbjct: 402 LFDR--MPEHNTVSFNSIIAGYAQHGIKTESLCLFEQMLEIGIAPTRITFISVLSACAHT 459
Query: 259 GLVKEAWYFFD 269
G V+E +FD
Sbjct: 460 GKVEEGRRYFD 470
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 126/268 (47%), Gaps = 17/268 (6%)
Query: 12 TFPFLAKASACLLKREL--GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFD 69
TF L K C+ ++L G +++ K+ ++SN I +YS + A F+
Sbjct: 10 TFRHLLKE--CIANKDLLIGKSLYTLYLKSLLPPSTYLSNHFIILYSKCNRLTLAHHAFN 67
Query: 70 GIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAV 129
N+ S+N +LD YAK +AR +FD +P+ D +S++ LI Y GD AL +
Sbjct: 68 QNHEPNVFSFNVLLDAYAKKSLTHIARGLFDQIPQPDAISYNTLITAYADCGDSLNALYL 127
Query: 130 FEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAK 189
F EMR +G + T+ V+ AC + ++ R +H + L + ++ S V Y K
Sbjct: 128 FREMRETGIDMDGYTLSGVITACCN--DVNLIRQLHCLAGNYGLDSYVSVKNSFVTYYGK 185
Query: 190 CGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYL 249
G ++EA VF ++ D WN+MI + ++L LF EM G+ D T
Sbjct: 186 NGFLEEAERVFYGIEIENRDQVSWNTMIVAYGRQREGFKALKLFQEMTHRGIDVDMYTLA 245
Query: 250 NLLSACA-----------HGGLVKEAWY 266
++L+A H L+K +Y
Sbjct: 246 SVLTAFTCLEDLFGGFQFHANLIKTGFY 273
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 80/163 (49%), Gaps = 32/163 (19%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRF-VSNSLIHMYSSFR 59
M R G PD +F + +A + L G IH K+ S++ V+N+L+ MYS
Sbjct: 335 MQRAGFRPDDCSFVCVIRACSNLSSPSQGKQIHAMTVKSEIPSNQISVNNALVAMYS--- 391
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
KCG++ AR++FD MPE + +S++ +I GY +
Sbjct: 392 ----------------------------KCGNLQDARRLFDRMPEHNTVSFNSIIAGYAQ 423
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR 162
G E+L +FE+M G P +T +SVL ACAH G +++GR
Sbjct: 424 HGIKTESLCLFEQMLEIGIAPTRITFISVLSACAHTGKVEEGR 466
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 160/396 (40%), Gaps = 93/396 (23%)
Query: 10 HLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFD 69
+L+ F+ S C L LA H + +E + F N L+ Y+ AR +FD
Sbjct: 44 YLSNHFIILYSKC---NRLTLAHHAF--NQNHEPNVFSFNVLLDAYAKKSLTHIARGLFD 98
Query: 70 GIPVKNLVSWNSMLDGYAK---------------------------------CGDISMAR 96
IP + +S+N+++ YA C D+++ R
Sbjct: 99 QIPQPDAISYNTLITAYADCGDSLNALYLFREMRETGIDMDGYTLSGVITACCNDVNLIR 158
Query: 97 QVFDL-------------------------------------MPEQDVLSWSCLIDGYVR 119
Q+ L + +D +SW+ +I Y R
Sbjct: 159 QLHCLAGNYGLDSYVSVKNSFVTYYGKNGFLEEAERVFYGIEIENRDQVSWNTMIVAYGR 218
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
+ + +AL +F+EM G + T+ SVL A L L G H +I +
Sbjct: 219 QREGFKALKLFQEMTHRGIDVDMYTLASVLTAFTCLEDLFGGFQFHANLIKTGFYRNCHV 278
Query: 180 RTSLVDMYAKC-GAIQEALHVFRSGLMKPSDVFIWNSMIGGFAC-HGLVKESLDLFSEMH 237
+ LVD+YAKC G + + +F ++ D+ +WN+MI ++ L +E+LD F M
Sbjct: 279 GSGLVDLYAKCGGGMLDCRKIFVE--IREPDLVLWNTMISAYSLDEELSEETLDCFRRMQ 336
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYA-------CMVDVM 290
G +PD+ +++ ++ AC++ + + MT KSE + +V +
Sbjct: 337 RAGFRPDDCSFVCVIRACSNLSSPSQGKQI------HAMTVKSEIPSNQISVNNALVAMY 390
Query: 291 ARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
++ G + +A + ++P T S +++ G HG
Sbjct: 391 SKCGNLQDARRLFDRMPEHNTVS-FNSIIAGYAQHG 425
>28859.m000320 pentatricopeptide repeat-containing protein, putative
Length = 834
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 109/190 (57%), Gaps = 3/190 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQ-DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP 138
N++L Y +CGD+ ++F M + D +SW+ +I GY+ +A+ + M SG
Sbjct: 493 NALLACYGRCGDMDYCEKIFSKMSNRRDEVSWNSMISGYIHNDFLPKAMDLVWIMMQSGQ 552
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
+ + + ++L ACA + L++G H I L +V+ ++LVDMY+KCG I A
Sbjct: 553 RLDTFILATILSACASVATLERGMEAHACSIRAYLNFDVVVGSALVDMYSKCGRIDYASR 612
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHG 258
F S M +++ WNSMI G+A HG +L LF++M + G PD +T++ +LSAC+H
Sbjct: 613 FFES--MPLRNLYSWNSMISGYARHGRGDVALQLFTQMKLDGQLPDHVTFVGVLSACSHV 670
Query: 259 GLVKEAWYFF 268
GLV E + F
Sbjct: 671 GLVDEGFKHF 680
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 164/404 (40%), Gaps = 89/404 (22%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMY-SSFR 59
M+ G P+ F F A AC +LG+ IHG I K+ +D +SN LI MY +S
Sbjct: 32 MILEGYLPN--CFAFGAALKACQ-DLKLGMQIHGLILKSPNANDVVLSNVLISMYGNSLA 88
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ-------------- 105
I AR+ FD I +KN +S NS++ Y++ G A Q+F M +
Sbjct: 89 SIDYARRAFDEIKIKNSISCNSIISVYSQRGYTGDAFQIFSSMQRKHSGFSFKPNEYTFG 148
Query: 106 -------------------------------DVLSWSCLIDGYVRKGDYDEALAVFEEM- 133
D+ S L+ G+ R G +D A +FE+M
Sbjct: 149 SLITAAGSAVDSGSQLLEQMLTMVEKSGLLSDMYVGSALVSGFSRFGLFDYAKKIFEQMG 208
Query: 134 ----------------RVSGPKPNEVTM-------------VSVLCACAHLGALD----K 160
+ G + EV M V +L A L+ K
Sbjct: 209 MRNAVSMNSLMVGLVTQKCGEEAAEVFMEMRNIVNINLDSYVILLSAFTKFTLLEEGRRK 268
Query: 161 GRMMHHYVIDNEL-PLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGG 219
GR +H + I L + + + L++MYAKCGA+ +A VFR LM D WNSMI G
Sbjct: 269 GREVHGFAIRTGLNDIKVAIGNGLINMYAKCGAVDDARSVFR--LMNDRDAVSWNSMISG 326
Query: 220 FACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPK 279
F ++++ + +M G+ P + ++ LS+CA G + K G+
Sbjct: 327 FDQSECFEDAVKCYHKMRRTGLMPSNFSLISTLSSCASLGWIMLGQQLQSEGLKLGLDLD 386
Query: 280 SEHYACMVDVMARAGQVAE---AYQFLCQIPIQPTASMLGALLN 320
++ + A G +AE + + Q +M+GAL N
Sbjct: 387 VSVSNALLALYAETGYLAECRKVFSLMLQFDQVSCNTMIGALAN 430
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 102/176 (57%), Gaps = 3/176 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N +++ YAKCG + AR VF LM ++D +SW+ +I G+ + +++A+ + +MR +G
Sbjct: 290 NGLINMYAKCGAVDDARSVFRLMNDRDAVSWNSMISGFDQSECFEDAVKCYHKMRRTGLM 349
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
P+ +++S L +CA LG + G+ + + L L + + +L+ +YA+ G + E V
Sbjct: 350 PSNFSLISTLSSCASLGWIMLGQQLQSEGLKLGLDLDVSVSNALLALYAETGYLAECRKV 409
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGL-VKESLDLFSEMHIVGVKPDEITYLNLLSA 254
F LM D N+MIG A + + E+++ F EM G+ + +T++N+L+A
Sbjct: 410 F--SLMLQFDQVSCNTMIGALANSEVSISEAVEFFLEMMRAGLNLNRVTFINILAA 463
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 59/87 (67%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
++V ++++D Y+KCG I A + F+ MP +++ SW+ +I GY R G D AL +F +M+
Sbjct: 590 DVVVGSALVDMYSKCGRIDYASRFFESMPLRNLYSWNSMISGYARHGRGDVALQLFTQMK 649
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKG 161
+ G P+ VT V VL AC+H+G +D+G
Sbjct: 650 LDGQLPDHVTFVGVLSACSHVGLVDEG 676
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 10/158 (6%)
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
MPE++ ++W+CLI GY G EA +F+ M + G PN + L AC L G
Sbjct: 1 MPERNCVTWACLISGYNNNGMPKEACGIFKGMILEGYLPNCFAFGAALKACQD---LKLG 57
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKC-GAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
+H ++ + +VL L+ MY +I A F +K + NS+I +
Sbjct: 58 MQIHGLILKSPNANDVVLSNVLISMYGNSLASIDYARRAFDE--IKIKNSISCNSIISVY 115
Query: 221 ACHGLVKESLDLFSEMHI----VGVKPDEITYLNLLSA 254
+ G ++ +FS M KP+E T+ +L++A
Sbjct: 116 SQRGYTGDAFQIFSSMQRKHSGFSFKPNEYTFGSLITA 153
>29737.m001266 pentatricopeptide repeat-containing protein, putative
Length = 555
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 134/266 (50%), Gaps = 34/266 (12%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G P+ +TF A A + G IH + G D+FVSN+L MY
Sbjct: 309 GAIPNPVTFTNALPACARMGFLRPGKEIHARAFRMGCYFDQFVSNALTDMY--------- 359
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
AKCG +++AR VF++ +D +S++ LI GY + +
Sbjct: 360 ----------------------AKCGFLNLARNVFNI-SLRDEVSYNILIVGYSQTTNSS 396
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
E+L++F EM + G + + V+ + V+ ACA L AL +G +H V+ L + + + SL+
Sbjct: 397 ESLSLFLEMGLVGMERDVVSYMGVIAACASLVALKQGEEIHALVVRKNLHMHIFIANSLL 456
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
D Y KCG I A +F + D WN++I G G ++ +++LF M GV+ D
Sbjct: 457 DFYTKCGKIDLACKIFYR--ISEKDAASWNTIILGVGMLGELEAAINLFEAMREDGVEYD 514
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDC 270
++Y+ +LSAC+HGGLV++ + C
Sbjct: 515 SVSYIAVLSACSHGGLVEKGKKYSAC 540
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 141/335 (42%), Gaps = 77/335 (22%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITK-------------------AGY 41
M+R G+ PD TFPF+ KA A L + G+ IHG + K GY
Sbjct: 1 MVRNGIRPDDHTFPFVLKACADNLNVQKGMEIHGCVFKLGFDFDVFVGNTLLLFYGNTGY 60
Query: 42 ------------ESDRFVSNSLI-------------------HMYSSFRDIPNARKVFDG 70
E D N+L+ ++ S FR PN V
Sbjct: 61 LSDAKKVFDEMLERDVVSWNTLLGAFSVNGFYLKALDLFYEMNLRSGFR--PNMVTVVSV 118
Query: 71 IPV-----------------------KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDV 107
+PV + N+++D Y KCG++ +R+VFD M E++
Sbjct: 119 LPVCAALEDEVVASEIHCYVVKIGLDSQVTLCNALVDVYGKCGNLKSSRRVFDEMMERNE 178
Query: 108 LSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHY 167
+SW+ +I +AL F M KPN VT+ S+L L D G+ +H +
Sbjct: 179 VSWNAIITSLAYMEHNKDALEAFRLMINEEVKPNSVTIASILPVLVELEHFDLGKEIHGF 238
Query: 168 VIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
+ + + + SL+DMYAK G +A VF LM +V WN+M+ FA +
Sbjct: 239 SLRFGIESDVFISNSLIDMYAKSGHSTQASVVFH--LMTEKNVVSWNAMVANFAQNRFEL 296
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVK 262
+++L +M G P+ +T+ N L ACA G ++
Sbjct: 297 AAIELVRQMQTDGAIPNPVTFTNALPACARMGFLR 331
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 121/256 (47%), Gaps = 34/256 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ V P+ +T + L +LG IHG+ + G ESD F+SNSLI M
Sbjct: 204 MINEEVKPNSVTIASILPVLVELEHFDLGKEIHGFSLRFGIESDVFISNSLIDM------ 257
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
YAK G + A VF LM E++V+SW+ ++ + +
Sbjct: 258 -------------------------YAKSGHSTQASVVFHLMTEKNVVSWNAMVANFAQN 292
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
A+ + +M+ G PN VT + L ACA +G L G+ +H +
Sbjct: 293 RFELAAIELVRQMQTDGAIPNPVTFTNALPACARMGFLRPGKEIHARAFRMGCYFDQFVS 352
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L DMYAKCG + A +VF L D +N +I G++ ESL LF EM +VG
Sbjct: 353 NALTDMYAKCGFLNLARNVFNISL---RDEVSYNILIVGYSQTTNSSESLSLFLEMGLVG 409
Query: 241 VKPDEITYLNLLSACA 256
++ D ++Y+ +++ACA
Sbjct: 410 MERDVVSYMGVIAACA 425
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 31/159 (19%)
Query: 4 VGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPN 63
VG+ D +++ + A A L+ + G IH + + F++NSL+ Y+ I
Sbjct: 408 VGMERDVVSYMGVIAACASLVALKQGEEIHALVVRKNLHMHIFIANSLLDFYTKCGKIDL 467
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
A K+F I K+ SWN+++ G G++
Sbjct: 468 ACKIFYRISEKDAASWNTIILGVGMLGEL------------------------------- 496
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR 162
+ A+ +FE MR G + + V+ ++VL AC+H G ++KG+
Sbjct: 497 EAAINLFEAMREDGVEYDSVSYIAVLSACSHGGLVEKGK 535
>29801.m003061 pentatricopeptide repeat-containing protein, putative
Length = 318
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 111/191 (58%), Gaps = 10/191 (5%)
Query: 86 YAKCGDISMARQVFDLMPE---QDVLSWSCLIDGYVRKGDYDEALAVFEEM-RVSGPKPN 141
Y K G I +R+ FD + + + VL W+ +I+ YV+ G EAL +F M + +PN
Sbjct: 92 YGKLGKIEKSRERFDDISDSGKRSVLPWNSMINAYVQNGYALEALCIFHLMVKDPNSRPN 151
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVI----DNELPLTLVLRTSLVDMYAKCGAIQEAL 197
VTMVSVL ACA +G L+ GR +H Y+ L L T+L+DMY+KCG++ +A
Sbjct: 152 HVTMVSVLSACAQVGNLELGRWVHEYLKFKGRKGVLESNTFLATALIDMYSKCGSLDKAK 211
Query: 198 HVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
VF M DV +N+MI G A +G +E++ LFS++ +G+ P+ T+L LL AC+H
Sbjct: 212 EVFYQ--MVSKDVVSFNAMIMGLAINGEGQEAVKLFSKVQELGLHPNGGTFLGLLWACSH 269
Query: 258 GGLVKEAWYFF 268
GL E F
Sbjct: 270 SGLSDEGRQIF 280
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 129/267 (48%), Gaps = 20/267 (7%)
Query: 102 MPEQDVLS-WSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK 160
MPE+ +L W+ LI G+ + G +E L +F M +P TMVSV AC++L
Sbjct: 1 MPEKGLLCCWTSLISGFAQSGYSEEVLKIFCLMVKENLEPENDTMVSVFSACSNLEICQI 60
Query: 161 GRMMHHYV---IDNELPLTLVLRTS--LVDMYAKCGAIQEALHVF----RSGLMKPSDVF 211
+ + V ID L + + + LV +Y K G I+++ F SG V
Sbjct: 61 EKWLTVLVELNIDGNLKSSTCDKVNNVLVYLYGKLGKIEKSRERFDDISDSG---KRSVL 117
Query: 212 IWNSMIGGFACHGLVKESLDLFSEM-HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDC 270
WNSMI + +G E+L +F M +P+ +T +++LSACA G ++ + +
Sbjct: 118 PWNSMINAYVQNGYALEALCIFHLMVKDPNSRPNHVTMVSVLSACAQVGNLELGRWVHEY 177
Query: 271 L---GKNGMTPKSEHYA-CMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
L G+ G+ + A ++D+ ++ G + +A + Q+ + S A++ G +G
Sbjct: 178 LKFKGRKGVLESNTFLATALIDMYSKCGSLDKAKEVFYQMVSKDVVS-FNAMIMGLAING 236
Query: 327 KLDLAETVGRKLIELEPHQD-GRYVGL 352
+ A + K+ EL H + G ++GL
Sbjct: 237 EGQEAVKLFSKVQELGLHPNGGTFLGL 263
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 36/172 (20%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAG----YESDRFVSNSLIHMYSSFRDIPN 63
P+H+T + A A + ELG +H Y+ G ES+ F++ +LI MYS
Sbjct: 150 PNHVTMVSVLSACAQVGNLELGRWVHEYLKFKGRKGVLESNTFLATALIDMYS------- 202
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
KCG + A++VF M +DV+S++ +I G G+
Sbjct: 203 ------------------------KCGSLDKAKEVFYQMVSKDVVSFNAMIMGLAINGEG 238
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMH-HYVIDNELP 174
EA+ +F +++ G PN T + +L AC+H G D+GR + + +E+P
Sbjct: 239 QEAVKLFSKVQELGLHPNGGTFLGLLWACSHSGLSDEGRQIFLDMTLASEVP 290
>29912.m005392 pentatricopeptide repeat-containing protein, putative
Length = 388
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 117/200 (58%), Gaps = 3/200 (1%)
Query: 147 SVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK 206
++L C L LD G+ +H ++ + + + L++MY CG++++A VF M+
Sbjct: 123 ALLDCCGSLKLLDMGKRVHEFLRRSTFADDIEMNNKLIEMYGNCGSVRDARRVFDK--MR 180
Query: 207 PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWY 266
++ W+ +I G+A +G + L LF EM G++PDE T+ + +AC+ G +KE
Sbjct: 181 ERNMRSWHLLISGYAANGQGDDGLLLFEEMKESGLRPDENTFSVVFAACSSAGAIKEGLL 240
Query: 267 FFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNH 325
FF+ L + GM+P+ +HY ++D++ +AG + EA +F+ ++P +PT + AL + H
Sbjct: 241 FFEALRNEYGMSPRIDHYLGVIDILGKAGHLCEAKEFIERMPFEPTMEVWMALRSFAQIH 300
Query: 326 GKLDLAETVGRKLIELEPHQ 345
G ++L + V + L+ L+P +
Sbjct: 301 GDIELEDHVQQLLVALDPSE 320
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 88/168 (52%), Gaps = 6/168 (3%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N +++ Y CG + AR+VFD M E+++ SW LI GY G D+ L +FEEM+ SG +
Sbjct: 157 NKLIEMYGNCGSVRDARRVFDKMRERNMRSWHLLISGYAANGQGDDGLLLFEEMKESGLR 216
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL--VDMYAKCGAIQEAL 197
P+E T V AC+ GA+ +G ++ + NE ++ + L +D+ K G + EA
Sbjct: 217 PDENTFSVVFAACSSAGAIKEG-LLFFEALRNEYGMSPRIDHYLGVIDILGKAGHLCEAK 275
Query: 198 HVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
+P+ + +W ++ HG ++ L+ + +V + P E
Sbjct: 276 EFIERMPFEPT-MEVWMALRSFAQIHGDIE--LEDHVQQLLVALDPSE 320
>30147.m014200 pentatricopeptide repeat-containing protein, putative
Length = 461
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 128/262 (48%), Gaps = 41/262 (15%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V PD TFP + KA L ++G A+H + + G+ +DRF SN+L+ MY
Sbjct: 192 VEPDEFTFPRVLKACGGLGLIQVGEAVHRDLIRLGFANDRFASNALVDMY---------- 241
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
AKCGDI AR +F+ M +D +SW+ ++ GYVR G E
Sbjct: 242 ---------------------AKCGDIVKARSIFEKMASKDSVSWNSMLTGYVRHGLIIE 280
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
A M G + + V + S+L A++ + G +H +++ + L + SL+
Sbjct: 281 AFHTGRRMLQDGLELDSVAISSLL---ANVSSFKLGVQIHGWILRRGMQWDLSIANSLIV 337
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MY+ G + + +F + M+ DV WNS+I + H + L F M G PD
Sbjct: 338 MYSSNGKLVQTRWLFDN--MQERDVVSWNSII---SAHCKDPQVLAYFERMENSGAFPDN 392
Query: 246 ITYLNLLSACAHGGLVK--EAW 265
IT+++ LSACAH GLV+ E+W
Sbjct: 393 ITFVSALSACAHLGLVRDGESW 414
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 107/220 (48%), Gaps = 8/220 (3%)
Query: 40 GYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPV----KNLVSWNSMLDGYAKCGDISMA 95
G + D + +SL+ I + ++ IP KN + +L YA CG + A
Sbjct: 88 GIKIDTQIISSLLETCYRLNSIDHGMRIHRLIPTSILRKNTGVSSKLLRLYASCGYMDEA 147
Query: 96 RQVFDLMPEQD--VLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACA 153
Q+FD M +D +W+ LI GY G Y++A+A++ +M +P+E T VL AC
Sbjct: 148 HQMFDEMSNRDESAFAWNSLIAGYSELGLYEDAIALYFQMDEEYVEPDEFTFPRVLKACG 207
Query: 154 HLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIW 213
LG + G +H +I +LVDMYAKCG I +A +F M D W
Sbjct: 208 GLGLIQVGEAVHRDLIRLGFANDRFASNALVDMYAKCGDIVKARSIFEK--MASKDSVSW 265
Query: 214 NSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
NSM+ G+ HGL+ E+ M G++ D + +LL+
Sbjct: 266 NSMLTGYVRHGLIIEAFHTGRRMLQDGLELDSVAISSLLA 305
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 104/217 (47%), Gaps = 1/217 (0%)
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
D+ + E G K + + S+L C L ++D G +H + + L + + L
Sbjct: 75 DDVIKDLESSIGKGIKIDTQIISSLLETCYRLNSIDHGMRIHRLIPTSILRKNTGVSSKL 134
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
+ +YA CG + EA +F + F WNS+I G++ GL ++++ L+ +M V+P
Sbjct: 135 LRLYASCGYMDEAHQMFDEMSNRDESAFAWNSLIAGYSELGLYEDAIALYFQMDEEYVEP 194
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
DE T+ +L AC GL++ L + G +VD+ A+ G + +A
Sbjct: 195 DEFTFPRVLKACGGLGLIQVGEAVHRDLIRLGFANDRFASNALVDMYAKCGDIVKARSIF 254
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
++ + + S ++L G + HG + A GR++++
Sbjct: 255 EKMASKDSVSW-NSMLTGYVRHGLIIEAFHTGRRMLQ 290
>29634.m002110 pentatricopeptide repeat-containing protein, putative
Length = 418
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 143/333 (42%), Gaps = 70/333 (21%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D TF + A + L E G +H + KAG + +LI MYS + + ++ K F
Sbjct: 77 DAYTFTPVLSACSALPGAERGKQVHALMIKAGTDLGPIAKTALIDMYSKYGYLGDSVKAF 136
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDV--------------------- 107
+ + +++V+WNS+L + + G + A +F M + V
Sbjct: 137 EEVEFRDVVTWNSLLSSFLRHGLSNKALGIFGAMRREGVEFSEFTLCSVLKACAAVKAFS 196
Query: 108 ----------LSW--------SCLIDGYVRKGDYDEALAVFEEMR-----------VSGP 138
LSW + LID Y G DEAL VF + ++G
Sbjct: 197 QGKQVHGLVGLSWAVIWVVLGTALIDFYSTVGYVDEALKVFSSLSWRTDDVICNSLIAGC 256
Query: 139 ----------------KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTS 182
+PN V + S L AC+ L G +H I L
Sbjct: 257 VQNKRFEEAFSIMRTMRPNAVALTSALVACSENSVLWNGVQIHCAAIRFGFTSDTQLCNK 316
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG-- 240
L+DMYAKCG I A VF G+ + DV W SMI + HG E+L+LF +M ++G
Sbjct: 317 LIDMYAKCGKILNARSVF-DGIFRK-DVVSWTSMIDAYGRHGNGYEALELFKKMGLLGNM 374
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK 273
V P+ IT+L +LSAC H GLV+E FD + K
Sbjct: 375 VSPNSITFLAVLSACGHAGLVEEGRELFDLVRK 407
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 114/250 (45%), Gaps = 2/250 (0%)
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
C +FD P + + S + + + R GD+ A+F M + + T V
Sbjct: 25 CSRYVHTHHLFDEFPHRSLYSLNSQLASFSRLGDFLATWALFYRMHCACLDLDAYTFTPV 84
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
L AC+ L ++G+ +H +I L + +T+L+DMY+K G + +++ F ++
Sbjct: 85 LSACSALPGAERGKQVHALMIKAGTDLGPIAKTALIDMYSKYGYLGDSVKAFEE--VEFR 142
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFF 268
DV WNS++ F HGL ++L +F M GV+ E T ++L ACA +
Sbjct: 143 DVVTWNSLLSSFLRHGLSNKALGIFGAMRREGVEFSEFTLCSVLKACAAVKAFSQGKQVH 202
Query: 269 DCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKL 328
+G + ++D + G V EA + + + + +L+ GC+ + +
Sbjct: 203 GLVGLSWAVIWVVLGTALIDFYSTVGYVDEALKVFSSLSWRTDDVICNSLIAGCVQNKRF 262
Query: 329 DLAETVGRKL 338
+ A ++ R +
Sbjct: 263 EEAFSIMRTM 272
>30190.m011319 pentatricopeptide repeat-containing protein, putative
Length = 678
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 192/429 (44%), Gaps = 49/429 (11%)
Query: 4 VGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPN 63
+GV + TFP L KA C ++ L I +G + F + +I+ + D
Sbjct: 201 LGVKCNEFTFPSLLKA--CTSTTDMWLGRQDMIL-SGIRPNEFSLSCMINACTGLEDSSQ 257
Query: 64 ARKVFDGIPVK-----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
RK+ G +K +L S N+++D YAK G + A +VF+ + + D++SW+ +I G
Sbjct: 258 GRKI-HGYLIKLAYDLDLFSANALVDMYAKVGTLEEAIRVFEEIAKPDIVSWNAIIAGCA 316
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
+ + AL +F +M SG PN T+ S L ACA +G + GR +H ++ ++
Sbjct: 317 LREYHCWALELFGKMNRSGMCPNMFTISSALKACAGMGLKELGRQLHSSLLKMDIRSDSF 376
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
L L+DMY+KC + +A +F LM D+ +WN+ I G + +G E++ LF MH
Sbjct: 377 LAVGLIDMYSKCDLMTDARLLFN--LMPERDLIVWNAAITGHSQNGEDLEAVSLFPSMHK 434
Query: 239 VGVKPDEITYLNLLSACA-----------HGGLVKEAWYF--------FDCLGKNGMTPK 279
GV ++IT +L + A H +K + F D GK G
Sbjct: 435 EGVGFNQITLSTVLKSVASLQVDHICSQIHALSLKSGFQFDNYVANSLIDTYGKCGRIKD 494
Query: 280 SEH------------YACMVDVMARAGQVAEAYQFLCQI---PIQPTASMLGALLNGCMN 324
+ + M+ ++ GQ EA + ++ I+P + + +LLN C N
Sbjct: 495 ATRIFQESPFVDLVAFTSMITAYSQDGQGEEALKLYLEMQDRKIRPDSFVCSSLLNACAN 554
Query: 325 HGKLDLAETVGRKLIELEPHQDGRYVG--LSNVYAIFRRWDKA-RSMREAMERMGVKKSP 381
+ + V +++ D + G L N+YA D A R+ E ER V S
Sbjct: 555 LSAYEQGKQVHVHVLKFGFISD-IFAGNSLVNMYAKCGSIDDADRAFSEIPERGIVSWSA 613
Query: 382 GYSFVEMHG 390
HG
Sbjct: 614 MIGGFAQHG 622
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 127/255 (49%), Gaps = 33/255 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + GV + +T + K+ A L + IH K+G++ D +V+NSLI
Sbjct: 432 MHKEGVGFNQITLSTVLKSVASLQVDHICSQIHALSLKSGFQFDNYVANSLI-------- 483
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
D Y KCG I A ++F P D+++++ +I Y +
Sbjct: 484 -----------------------DTYGKCGRIKDATRIFQESPFVDLVAFTSMITAYSQD 520
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +EAL ++ EM+ +P+ S+L ACA+L A ++G+ +H +V+ +
Sbjct: 521 GQGEEALKLYLEMQDRKIRPDSFVCSSLLNACANLSAYEQGKQVHVHVLKFGFISDIFAG 580
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
SLV+MYAKCG+I +A F + + W++MIGGFA HG KE+L LF+ M G
Sbjct: 581 NSLVNMYAKCGSIDDADRAFSE--IPERGIVSWSAMIGGFAQHGHGKEALQLFNRMLEDG 638
Query: 241 VKPDEITYLNLLSAC 255
+ P+ + ++ SAC
Sbjct: 639 IPPNHMYVYDVPSAC 653
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 119/239 (49%), Gaps = 15/239 (6%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G IH + K G D + N LI++YS + ARK+ D +LVSW++++ GY++
Sbjct: 125 GKEIHARVIKLGLSQDPKIRNLLINLYSKCQFFKYARKMVDESTEPDLVSWSALISGYSQ 184
Query: 89 CGDISMARQVFDLMPEQDVLSWSC-------LIDGYVRKGDYDEALAVFEEMRVSGPKPN 141
G ++ E +L C L+ D ++M +SG +PN
Sbjct: 185 NG---FGKEAISAFYEMHLLGVKCNEFTFPSLLKACTSTTDMWLGR---QDMILSGIRPN 238
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR 201
E ++ ++ AC L +GR +H Y+I L L +LVDMYAK G ++EA+ VF
Sbjct: 239 EFSLSCMINACTGLEDSSQGRKIHGYLIKLAYDLDLFSANALVDMYAKVGTLEEAIRVFE 298
Query: 202 SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGL 260
+ KP D+ WN++I G A +L+LF +M+ G+ P+ T + L ACA GL
Sbjct: 299 E-IAKP-DIVSWNAIIAGCALREYHCWALELFGKMNRSGMCPNMFTISSALKACAGMGL 355
>29801.m003193 pentatricopeptide repeat-containing protein, putative
Length = 573
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 106/189 (56%), Gaps = 3/189 (1%)
Query: 156 GALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNS 215
G ++ + +H Y + + + L +++MY KCG++ +A VF MK D+ +W+
Sbjct: 308 GKIEDAKKVHDYFLQSTCRGDVRLNKKVIEMYGKCGSMTDARRVFDH--MKDRDIDLWHL 365
Query: 216 MIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN- 274
MI G+A + L E L LF +M G+KP T+L +LSACA V+E + F+ +
Sbjct: 366 MINGYASNNLGDEGLQLFEQMRQSGLKPTAETFLAVLSACASAEAVEEGFLHFESMKNEY 425
Query: 275 GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETV 334
G P +EHY ++DV+ ++G + E +++ ++P +PT + GAL N HG +DL +
Sbjct: 426 GFNPGTEHYLGVIDVLGKSGYINEIQEYIQKLPFEPTVDVWGALRNYARIHGDVDLEDRA 485
Query: 335 GRKLIELEP 343
++ L+P
Sbjct: 486 EELMVALDP 494
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 6/164 (3%)
Query: 82 MLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN 141
+++ Y KCG ++ AR+VFD M ++D+ W +I+GY DE L +FE+MR SG KP
Sbjct: 335 VIEMYGKCGSMTDARRVFDHMKDRDIDLWHLMINGYASNNLGDEGLQLFEQMRQSGLKPT 394
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL--VDMYAKCGAIQEALHV 199
T ++VL ACA A+++G +H + NE L +D+ K G I E
Sbjct: 395 AETFLAVLSACASAEAVEEG-FLHFESMKNEYGFNPGTEHYLGVIDVLGKSGYINEIQEY 453
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
+ +P+ V +W ++ HG V L+ +E +V + P
Sbjct: 454 IQKLPFEPT-VDVWGALRNYARIHGDV--DLEDRAEELMVALDP 494
>30128.m008896 pentatricopeptide repeat-containing protein, putative
Length = 459
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 111/197 (56%), Gaps = 1/197 (0%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R G++PD TF L KA + L +LG IH + G+E + ++ +Y++
Sbjct: 256 MKRRGIWPDEYTFAPLLKACSSLYDLKLGQCIHKDVIMIGFECFCSIQIGVVELYANCGL 315
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +++KVFD + ++ + WN M+ GY + GD++M +F M E+ V+SW+ +I +
Sbjct: 316 LEDSKKVFDEMRERDSIVWNLMIRGYCRRGDVNMGLYLFRKMSERSVVSWNIMISCLAQS 375
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV-L 179
G EAL +F EM+ G KP+E T+V+VL CA L A+ G+ + Y L V +
Sbjct: 376 GRDSEALRLFHEMQDEGFKPDEATVVTVLPICARLEAVSVGQWIQSYAESTGLYGDFVSV 435
Query: 180 RTSLVDMYAKCGAIQEA 196
+LVD Y+KCG ++ A
Sbjct: 436 GNALVDFYSKCGMLETA 452
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 11/211 (5%)
Query: 95 ARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAH 154
A +VF ++L ++ ++ GY G ++E+L+ F M+ G P+E T +L AC+
Sbjct: 218 ANRVFLQSVNPNILPFNAMVKGYSLCGPFEESLSFFSSMKRRGIWPDEYTFAPLLKACSS 277
Query: 155 LGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWN 214
L L G+ +H VI ++ +V++YA CG ++++ VF M+ D +WN
Sbjct: 278 LYDLKLGQCIHKDVIMIGFECFCSIQIGVVELYANCGLLEDSKKVFDE--MRERDSIVWN 335
Query: 215 SMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN 274
MI G+ G V L LF +M V +++ ++S A G EA F +
Sbjct: 336 LMIRGYCRRGDVNMGLYLFRKMSERSV----VSWNIMISCLAQSGRDSEALRLFHEMQDE 391
Query: 275 GMTPKSEHYACMVDVMAR-----AGQVAEAY 300
G P ++ + AR GQ ++Y
Sbjct: 392 GFKPDEATVVTVLPICARLEAVSVGQWIQSY 422
>29680.m001729 pentatricopeptide repeat-containing protein, putative
Length = 585
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 114/236 (48%), Gaps = 33/236 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ V P+H TF + KA A L LG + + K G+ S V NSLI MYS +
Sbjct: 376 MIEGHVKPNHFTFSSILKACANLSDLHLGEQFYAHAVKLGFASVNCVGNSLISMYSRCDN 435
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ NARK FD + KNLVS+N++++ YAK
Sbjct: 436 MENARKAFDVLFEKNLVSYNTIVEAYAK-------------------------------G 464
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+ +EA +F E+ +G N T S+L + +GA+ KG +H ++ ++ L +
Sbjct: 465 LNSEEAFELFNEIEDTGFVVNAFTFASLLSGASSIGAIGKGEQIHARILKSDFKTNLHIS 524
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
+L+ MY++CG I+ A VF M +V W SMI G+A HG +L+ F +M
Sbjct: 525 NALISMYSRCGDIEAAFQVFNG--MGDRNVISWTSMITGYAKHGFAVRALETFHKM 578
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 108/182 (59%), Gaps = 7/182 (3%)
Query: 81 SMLDGYAK-CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
+++D YAK CGD+ A +VFD M E+++++W+ +I + + G Y +A+ +F M SG
Sbjct: 218 ALIDMYAKGCGDVEGACKVFDNMSERNIVTWTLMISRFQQLGYYRDAIDLFNHMIFSGFM 277
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC---GAIQEA 196
P+ T+ V+ ACA LG L G+ +H + I + L + + SLVDMYAKC G++ ++
Sbjct: 278 PDNYTLSGVVSACAELGLLSLGKELHSWAIKSGLVYDVCVGCSLVDMYAKCAVDGSLDDS 337
Query: 197 LHVFRSGLMKPSDVFIWNSMIGGFACHGLVK-ESLDLFSEMHIVGVKPDEITYLNLLSAC 255
VF M +V W ++I G+ +G E+ +LF EM VKP+ T+ ++L AC
Sbjct: 338 RKVFDR--MTNHNVMSWTAIITGYVQNGRSDMEATELFLEMIEGHVKPNHFTFSSILKAC 395
Query: 256 AH 257
A+
Sbjct: 396 AN 397
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 154/339 (45%), Gaps = 40/339 (11%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + PD +T+ L K+ + G +H +T++G E D + NSLI +YS
Sbjct: 66 MTQNNTHPDLITYSLLLKSCIRSNNFQKGKLVHNCLTQSGLELDSVILNSLISLYS---- 121
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLM-PEQDVLSWSCLIDGYVR 119
KCG+++ A +F M ++D++SWS LI Y
Sbjct: 122 ---------------------------KCGELNSANDIFISMGNKRDLVSWSALISCYAT 154
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID-NELPLTLV 178
G +A+ V+ +M VSG PNE +V+ +C++ G ++ +I L +
Sbjct: 155 NGLEFDAIRVYIDMLVSGFFPNEYCYSAVIKSCSNRENFSYGEIIFGSLIKCGYLNSHVC 214
Query: 179 LRTSLVDMYAK-CGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
+ +L+DMYAK CG ++ A VF + M ++ W MI F G ++++DLF+ M
Sbjct: 215 VGCALIDMYAKGCGDVEGACKVFDN--MSERNIVTWTLMISRFQQLGYYRDAIDLFNHMI 272
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARA---G 294
G PD T ++SACA GL+ K+G+ +VD+ A+ G
Sbjct: 273 FSGFMPDNYTLSGVVSACAELGLLSLGKELHSWAIKSGLVYDVCVGCSLVDMYAKCAVDG 332
Query: 295 QVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAET 333
+ ++ + ++ S A++ G + +G+ D+ T
Sbjct: 333 SLDDSRKVFDRMTNHNVMSWT-AIITGYVQNGRSDMEAT 370
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 133/305 (43%), Gaps = 37/305 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G PD+ T + A A L LG +H + K+G D V SL+ MY
Sbjct: 271 MIFSGFMPDNYTLSGVVSACAELGLLSLGKELHSWAIKSGLVYDVCVGCSLVDMY----- 325
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKC---GDISMARQVFDLMPEQDVLSWSCLIDGY 117
AKC G + +R+VFD M +V+SW+ +I GY
Sbjct: 326 --------------------------AKCAVDGSLDDSRKVFDRMTNHNVMSWTAIITGY 359
Query: 118 VRKGDYD-EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
V+ G D EA +F EM KPN T S+L ACA+L L G + + +
Sbjct: 360 VQNGRSDMEATELFLEMIEGHVKPNHFTFSSILKACANLSDLHLGEQFYAHAVKLGFASV 419
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
+ SL+ MY++C ++ A F ++ ++ +N+++ +A +E+ +LF+E+
Sbjct: 420 NCVGNSLISMYSRCDNMENARKAFD--VLFEKNLVSYNTIVEAYAKGLNSEEAFELFNEI 477
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQV 296
G + T+ +LLS + G + + + K+ ++ + +R G +
Sbjct: 478 EDTGFVVNAFTFASLLSGASSIGAIGKGEQIHARILKSDFKTNLHISNALISMYSRCGDI 537
Query: 297 AEAYQ 301
A+Q
Sbjct: 538 EAAFQ 542
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
+++ G +A+ + M + P+ +T +L +C KG+++H+ + + L L
Sbjct: 50 HLKAGHLSKAIIALDVMTQNNTHPDLITYSLLLKSCIRSNNFQKGKLVHNCLTQSGLELD 109
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
V+ SL+ +Y+KCG + A +F S + D+ W+++I +A +GL +++ ++ +M
Sbjct: 110 SVILNSLISLYSKCGELNSANDIFIS-MGNKRDLVSWSALISCYATNGLEFDAIRVYIDM 168
Query: 237 HIVGVKPDEITYLNLLSACAH 257
+ G P+E Y ++ +C++
Sbjct: 169 LVSGFFPNEYCYSAVIKSCSN 189
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 55/101 (54%)
Query: 4 VGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPN 63
G + TF L ++ + G IH I K+ ++++ +SN+LI MYS DI
Sbjct: 480 TGFVVNAFTFASLLSGASSIGAIGKGEQIHARILKSDFKTNLHISNALISMYSRCGDIEA 539
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPE 104
A +VF+G+ +N++SW SM+ GYAK G A + F M E
Sbjct: 540 AFQVFNGMGDRNVISWTSMITGYAKHGFAVRALETFHKMLE 580
>30170.m014304 pentatricopeptide repeat-containing protein, putative
Length = 390
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 131/268 (48%), Gaps = 37/268 (13%)
Query: 8 PDHLTFPFLAKASACLLKRELGLA--IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
P+ +TF ++ SAC LG+ +HG+ K G + V N+LI +Y
Sbjct: 143 PNEVTF--ISLISACTDAGALGMGKYVHGFAVKLGTILEVKVVNALICLY---------- 190
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
K G + A ++F+ M Q+++SW+ +I +V++G +
Sbjct: 191 ---------------------GKSGCLDAACRIFEEMQVQNLVSWNSIIAVHVQRGFAQD 229
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
L F MR +G ++ T+V +L AC +G +H Y+ L + L + T+L+
Sbjct: 230 GLRYFIVMRRAGIVSDQATLVILLQACESVGLRKLVEAIHGYIFGCGLNMNLAVETALLK 289
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
+YA G + + VFR M D W +M+ +A HG KE+++LF M G PD
Sbjct: 290 LYANLGMLSASHKVFRE--MVNKDAVAWTAMLACYAVHGCGKEAIELFELMVREGAVPDH 347
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGK 273
+T+ +LLSAC+H GLVKE Y+F + +
Sbjct: 348 VTFTHLLSACSHSGLVKEGKYYFKVMSE 375
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 35/164 (21%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R G+ D T L +A + R+L AIHGYI G + V +L+ +Y++
Sbjct: 237 MRRAGIVSDQATLVILLQACESVGLRKLVEAIHGYIFGCGLNMNLAVETALLKLYANLGM 296
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYA--KCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
+ + KVF + K+ V+W +ML YA CG
Sbjct: 297 LSASHKVFREMVNKDAVAWTAMLACYAVHGCG---------------------------- 328
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR 162
EA+ +FE M G P+ VT +L AC+H G + +G+
Sbjct: 329 -----KEAIELFELMVREGAVPDHVTFTHLLSACSHSGLVKEGK 367
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 84/176 (47%), Gaps = 4/176 (2%)
Query: 140 PNEVTMVSVLCAC-AHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
PN T+VS L + A ++ ++H VI + + V Y + G ++A +
Sbjct: 40 PNLDTLVSALISSIASCNSISYCGVLHSRVIKSLSYNHGFVGDQFVSAYVRLGCTKDAQN 99
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV-KPDEITYLNLLSACAH 257
+F + D+ WNS+I GF+ G + L++FS+M + KP+E+T+++L+SAC
Sbjct: 100 LFDE--LPEKDLVSWNSLISGFSRRGDLDNCLNVFSKMKYQTILKPNEVTFISLISACTD 157
Query: 258 GGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTAS 313
G + Y K G + + ++ + ++G + A + ++ +Q S
Sbjct: 158 AGALGMGKYVHGFAVKLGTILEVKVVNALICLYGKSGCLDAACRIFEEMQVQNLVS 213
>29825.m000331 pentatricopeptide repeat-containing protein, putative
Length = 684
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 129/251 (51%), Gaps = 1/251 (0%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PDH T A A L G +H Y K+ ++ V+N+L+ +Y+ ++I + + V
Sbjct: 64 PDHYTLSTTLTACANLCDTTFGNKLHAYAIKSSLKTYTHVANTLLSLYAKAKEIDSVKWV 123
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
F ++ S+ +++ AK G + A +FD+MP++DV+ W+ LI G + G+ + L
Sbjct: 124 FGETENPDVYSYATLVSACAKLGHVDYACVLFDVMPQRDVVVWNALITGCMESGNEEIGL 183
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
F +M SG + + ++ SVL C L ++ G +H VI + + + +L+ MY
Sbjct: 184 NYFRDMCRSGVRHDNYSLASVLSGC-KLVMVNFGMQVHSLVIKSGSLVEPSVINALITMY 242
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
C + + VF D +N MI G G ++E+L + +M ++P+E+T
Sbjct: 243 FNCENVLDGYLVFEEAEDSVRDQITYNVMIDGLVSVGRIEEALIICRKMLGSCLRPNELT 302
Query: 248 YLNLLSACAHG 258
+++L+S+C H
Sbjct: 303 FVSLMSSCLHA 313
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 119/234 (50%), Gaps = 6/234 (2%)
Query: 30 LAIHGYIT--KAGYESDRFVSNSLIHMYSSFRDIPNARK-VFDGIPVKNLVSWNSMLDGY 86
LAI Y+ + G E D F SL+ + VF + N+ N++ Y
Sbjct: 381 LAILAYLEMRRTGTEPDEFTFGSLLASSELLETVEMIHALVFRNSLISNIQVSNALASAY 440
Query: 87 AKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMV 146
+K G++ + Q+F M +D++SW+ +I G++ G L F E+++S K NE T+
Sbjct: 441 SKHGNMEQSYQIFSDMSFRDLISWNSIISGFLLNGLPLLGLEKFSELQMSEFKSNEYTLN 500
Query: 147 SVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK 206
+L CA + AL +G+ +H Y++ + + L L+ YAKCG I + VF + +
Sbjct: 501 IILSICASIPALGQGKQVHGYIMRSGFSSEVSLGNGLITFYAKCGLIDWSSRVFTA--LA 558
Query: 207 PSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIVGVKPDEITYLNLLSACAHGG 259
D WN++I +A HG E++ F M H V+PD+ T+ +LSAC+H
Sbjct: 559 KKDTVSWNALISAYAQHGKGNEAIYQFEAMQHSSEVQPDDATFKIVLSACSHAA 612
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 147/327 (44%), Gaps = 40/327 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML + P+ LTF L S+CL E+G H K G+E+ +SN+ I MYSS
Sbjct: 291 MLGSCLRPNELTFVSLM--SSCL-HAEIGYQFHAQAIKMGFEASTSLSNATITMYSS--- 344
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
C D+ AR+VF+ + +D +SW+ +I Y +
Sbjct: 345 ----------------------------CKDLHAARKVFERLERKDPVSWNTMISSYTQG 376
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
A+ + EMR +G +P+E T S+L + L ++ M+H V N L + +
Sbjct: 377 NFGRLAILAYLEMRRTGTEPDEFTFGSLLASSELLETVE---MIHALVFRNSLISNIQVS 433
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L Y+K G ++++ +F M D+ WNS+I GF +GL L+ FSE+ +
Sbjct: 434 NALASAYSKHGNMEQSYQIFSD--MSFRDLISWNSIISGFLLNGLPLLGLEKFSELQMSE 491
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
K +E T +LS CA + + + ++G + + ++ A+ G + +
Sbjct: 492 FKSNEYTLNIILSICASIPALGQGKQVHGYIMRSGFSSEVSLGNGLITFYAKCGLIDWSS 551
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGK 327
+ + + T S AL++ HGK
Sbjct: 552 RVFTALAKKDTVSW-NALISAYAQHGK 577
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 32/127 (25%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G +HGYI ++G+ S+ + N LI Y+ I + +VF + K+ VSWN+++ YA+
Sbjct: 515 GKQVHGYIMRSGFSSEVSLGNGLITFYAKCGLIDWSSRVFTALAKKDTVSWNALISAYAQ 574
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP-KPNEVTMVS 147
G KG +EA+ FE M+ S +P++ T
Sbjct: 575 HG-----------------------------KG--NEAIYQFEAMQHSSEVQPDDATFKI 603
Query: 148 VLCACAH 154
VL AC+H
Sbjct: 604 VLSACSH 610
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 74/183 (40%), Gaps = 31/183 (16%)
Query: 104 EQDVLSWSCLIDGYVRKGDYDEALAVFEEMR--VSGPKPNEVTMVSVLCACAHLGALDKG 161
+Q +L + + Y +AL +F+++R KP+ T+ + L ACA+L G
Sbjct: 26 QQQLLKLNRQLAKLTHSTQYKDALHLFDKIRSLYYYLKPDHYTLSTTLTACANLCDTTFG 85
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSG------------------ 203
+H Y I + L + +L+ +YAK I VF
Sbjct: 86 NKLHAYAIKSSLKTYTHVANTLLSLYAKAKEIDSVKWVFGETENPDVYSYATLVSACAKL 145
Query: 204 -----------LMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
+M DV +WN++I G G + L+ F +M GV+ D + ++L
Sbjct: 146 GHVDYACVLFDVMPQRDVVVWNALITGCMESGNEEIGLNYFRDMCRSGVRHDNYSLASVL 205
Query: 253 SAC 255
S C
Sbjct: 206 SGC 208
>30131.m006988 pentatricopeptide repeat-containing protein, putative
Length = 553
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Query: 67 VFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEA 126
+ G ++ LV+ NS++D YAKCG A ++F + + + W+ LI V+KG +E
Sbjct: 372 IVTGADLEVLVA-NSLVDMYAKCGRSEYAERIFVKLSSKSTVPWTALISANVQKGLLEEG 430
Query: 127 LAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDM 186
L +F EMR + ++ T SVL A A+L ++ G+ +H Y+I + + ++LVDM
Sbjct: 431 LKLFNEMRRTNVSADQATFASVLKASANLASISLGKQLHSYLIRSGFWSNVYSGSALVDM 490
Query: 187 YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
YAKCG+++EA+ F+ M +V WN++I +A +G + +L F EM + G +PD +
Sbjct: 491 YAKCGSVKEAIRTFKE--MPGRNVISWNALISAYAQNGDGEATLKSFEEMVLSGYQPDSL 548
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 126/252 (50%), Gaps = 8/252 (3%)
Query: 10 HLTFPF--LAKASACLLKRE----LGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPN 63
H PF LA SA + + G+ I I K G+ SN + +
Sbjct: 5 HRQIPFKNLASLSASQPQNKSYHNAGIFIDARIVKTGFNPITSRSNYQVKSLLQRGQLSE 64
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
AR +FD +P KN VS N M+ GY K ++S+AR++FD M ++ ++W+ LI GY + +
Sbjct: 65 ARDLFDQMPHKNTVSVNMMILGYVKERNLSIARELFDSMVDRTAVTWTILIGGYCQFDQF 124
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
EA +F M G KP+ VT ++L C + +H +V+ +++ SL
Sbjct: 125 SEAFKLFSNMIRDGKKPDYVTFATLLSGCNDPEMTKELFQVHTHVVKLGHGSAVIICNSL 184
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
VD Y K + A +F+ M D +N++I G+ GL ++++ LF++M +G +P
Sbjct: 185 VDSYCKMHRLDLAHRIFKE--MVERDSVTYNALITGYGKEGLNEDAIRLFTQMQNLGFEP 242
Query: 244 DEITYLNLLSAC 255
+ T+ +L AC
Sbjct: 243 SDFTFQAVLCAC 254
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 132/307 (42%), Gaps = 33/307 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M +G P TF + A L G IHGY K G + FV NSL
Sbjct: 235 MQNLGFEPSDFTFQAVLCACIGLDDIIFGQQIHGYAVKMGLVWNVFVGNSL--------- 285
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
LD Y+K ++ A ++F MPE D +S++ +I Y
Sbjct: 286 ----------------------LDFYSKHDCVNDAWKLFSKMPELDGVSYNVMITAYSWI 323
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G Y E++ +F E++ + + ++L + L G+ +H + I L +++
Sbjct: 324 GQYRESIDLFRELQFTKFERRNFPFATMLSIAGNTLDLQMGQQLHSHAIVTGADLEVLVA 383
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
SLVDMYAKCG + A +F + W ++I GL++E L LF+EM
Sbjct: 384 NSLVDMYAKCGRSEYAERIFVK--LSSKSTVPWTALISANVQKGLLEEGLKLFNEMRRTN 441
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
V D+ T+ ++L A A+ + L ++G + +VD+ A+ G V EA
Sbjct: 442 VSADQATFASVLKASANLASISLGKQLHSYLIRSGFWSNVYSGSALVDMYAKCGSVKEAI 501
Query: 301 QFLCQIP 307
+ ++P
Sbjct: 502 RTFKEMP 508
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 122/258 (47%), Gaps = 35/258 (13%)
Query: 1 MLRVGVFPDHLTF-PFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFR 59
M+R G PD++TF L+ + + +EL +H ++ K G+ S + NSL+
Sbjct: 134 MIRDGKKPDYVTFATLLSGCNDPEMTKEL-FQVHTHVVKLGHGSAVIICNSLV------- 185
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
D Y K + +A ++F M E+D ++++ LI GY +
Sbjct: 186 ------------------------DSYCKMHRLDLAHRIFKEMVERDSVTYNALITGYGK 221
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
+G ++A+ +F +M+ G +P++ T +VLCAC L + G+ +H Y + L + +
Sbjct: 222 EGLNEDAIRLFTQMQNLGFEPSDFTFQAVLCACIGLDDIIFGQQIHGYAVKMGLVWNVFV 281
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
SL+D Y+K + +A +F M D +N MI ++ G +ES+DLF E+
Sbjct: 282 GNSLLDFYSKHDCVNDAWKLFSK--MPELDGVSYNVMITAYSWIGQYRESIDLFRELQFT 339
Query: 240 GVKPDEITYLNLLSACAH 257
+ + +LS +
Sbjct: 340 KFERRNFPFATMLSIAGN 357
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 31/146 (21%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R V D TF + KASA L LG +H Y+ ++G+ S
Sbjct: 437 MRRTNVSADQATFASVLKASANLASISLGKQLHSYLIRSGFWS----------------- 479
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
N+ S ++++D YAKCG + A + F MP ++V+SW+ LI Y +
Sbjct: 480 --------------NVYSGSALVDMYAKCGSVKEAIRTFKEMPGRNVISWNALISAYAQN 525
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMV 146
GD + L FEEM +SG +P+ + +
Sbjct: 526 GDGEATLKSFEEMVLSGYQPDSLAAI 551
>29908.m005965 pentatricopeptide repeat-containing protein, putative
Length = 498
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 127/255 (49%), Gaps = 33/255 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R + ++LT + +A + G +H I K+G +S+ ++ ++L+ Y
Sbjct: 259 MKRRKIISNNLTVVSVLRACGSISASLTGREVHAQIIKSGIQSNVYLGSTLVWFY----- 313
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
KCG+ ++A +V M ++V+SW+ +I GY+
Sbjct: 314 --------------------------CKCGEFNIASKVLQQMSFRNVVSWTAMISGYIGL 347
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G EAL +EM G +PNE T S L ACA+L ++ +G+++H + + +
Sbjct: 348 GYEFEALEFLKEMMDEGVEPNEFTYSSALKACANLESVLQGKLIHSFANKTPASSNVYVG 407
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
++L+ MY+KCG + +A+ VF S M ++ W +MI +A +GL +E+L L M G
Sbjct: 408 SALIYMYSKCGYLSDAIQVFDS--MPERNLISWKTMILSYARNGLCREALKLMYRMQAEG 465
Query: 241 VKPDEITYLNLLSAC 255
++ D+ Y +++ +C
Sbjct: 466 IEVDDYIYASVMGSC 480
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 166/395 (42%), Gaps = 79/395 (20%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
++ GV ++ TF + + L ELG IH + K +
Sbjct: 58 LIENGVTANNRTFVCILNVCSKRLDFELGRQIHACVVKGNW------------------- 98
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+NL+ ++++ YA+CGD+ A F + E+DV+ W+ +I ++
Sbjct: 99 -------------RNLIVDSAIVSFYAQCGDLESAFCAFFQVREKDVVCWTSVISACSQQ 145
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +EA +F +M G PNE T+ ++L AC AL GR +H ++ + +
Sbjct: 146 GRGEEAFRMFSQMLGEGFLPNEFTVCAILKACGEKKALKFGRQLHCAIVKGMYKDDVFIG 205
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
TSLVDMYAKCG + ++ VF M+ + W S+I G+A GL +E++ LF M
Sbjct: 206 TSLVDMYAKCGEMIDSKEVFDG--MRKRNTVTWTSIIAGYARKGLGEEAIRLFRVMKRRK 263
Query: 241 VKPDEITYLNLLSACA-----------HGGLVKEA------------WYFFDCLGKNGMT 277
+ + +T +++L AC H ++K W++ C G+ +
Sbjct: 264 IISNNLTVVSVLRACGSISASLTGREVHAQIIKSGIQSNVYLGSTLVWFYCKC-GEFNIA 322
Query: 278 PKSEHYACMVDVMARAGQVA---------EAYQFLCQI---PIQPTASMLGALLNGCMNH 325
K +V++ ++ EA +FL ++ ++P + L C N
Sbjct: 323 SKVLQQMSFRNVVSWTAMISGYIGLGYEFEALEFLKEMMDEGVEPNEFTYSSALKACAN- 381
Query: 326 GKLDLAETVGRKLI----ELEPHQDGRYVGLSNVY 356
L + KLI P YVG + +Y
Sbjct: 382 ----LESVLQGKLIHSFANKTPASSNVYVGSALIY 412
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 100/183 (54%), Gaps = 3/183 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N+++ YA+ G++ AR+VFD M E+ V+SW+ +I+GYV G DEAL +F E+ +G
Sbjct: 5 NNLISVYARLGELIEARKVFDQMHERCVVSWTAMINGYVSFGLDDEALRLFSELIENGVT 64
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
N T V +L C+ + GR +H V+ L++ +++V YA+CG ++ A
Sbjct: 65 ANNRTFVCILNVCSKRLDFELGRQIHACVVKGNWR-NLIVDSAIVSFYAQCGDLESAFCA 123
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F ++ DV W S+I + G +E+ +FS+M G P+E T +L AC
Sbjct: 124 FFQ--VREKDVVCWTSVISACSQQGRGEEAFRMFSQMLGEGFLPNEFTVCAILKACGEKK 181
Query: 260 LVK 262
+K
Sbjct: 182 ALK 184
>30131.m006940 pentatricopeptide repeat-containing protein, putative
Length = 1198
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 102/173 (58%), Gaps = 5/173 (2%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N+ + YAKCG + +AR +FD + +D+++W+ +I+ Y + ++L +F++M +
Sbjct: 708 NAAIGMYAKCGRLDLARSIFDGILNKDIVTWANMIEAYTQVDLPLQSLVLFKQMMLQNAC 767
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVI--DNELPLTLVLRTSLVDMYAKCGAIQEAL 197
P+ VT++SV+ AC L +L +H VI L + T++ D+YAKCG++ A
Sbjct: 768 PDSVTLLSVVRACTILASLQHAHAVHGIVIVTGGFFNSELAVETAVTDLYAKCGSLTYAR 827
Query: 198 HVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLN 250
VF M+ ++ W+++I G+ HG +E+LDLF+EM +KPD I + N
Sbjct: 828 KVFDR--MQNRNIISWSAIISGYGMHGHGREALDLFNEMK-ASIKPDHIAFTN 877
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 115/256 (44%), Gaps = 36/256 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+++ + P + T F+ KA CL E G +H K GY+ D FV NSLI MY+
Sbjct: 562 MVQLSIKPTNFTLTFVFKACGCLRDIEFGKQVHDDAVKDGYKLDLFVLNSLITMYARCGS 621
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+R+VFD + +N + WNSM+ +CLI
Sbjct: 622 YELSRQVFDKMSDRNGICWNSMIG--------------------------ACLI-----T 650
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
YDE + +F +M G + + +++V+ C + G + D L ++
Sbjct: 651 ERYDEGVKLFWQMSGEGIRLDRAALLNVM-RCVR--TENDGNGVSRVARDAGFNLDQYVQ 707
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+ + MYAKCG + A +F L K D+ W +MI + L +SL LF +M +
Sbjct: 708 NAAIGMYAKCGRLDLARSIFDGILNK--DIVTWANMIEAYTQVDLPLQSLVLFKQMMLQN 765
Query: 241 VKPDEITYLNLLSACA 256
PD +T L+++ AC
Sbjct: 766 ACPDSVTLLSVVRACT 781
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 2/178 (1%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
NL + +++ Y G IS A +F D W+ +I G+V Y +A+ ++ +M
Sbjct: 504 NLYFFTNLVAQYTSLGFISHAYSLFSTSNPTDAFLWNVMIRGFVDHAQYYDAILLYRQMV 563
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
KP T+ V AC L ++ G+ +H + + L L + SL+ MYA+CG+ +
Sbjct: 564 QLSIKPTNFTLTFVFKACGCLRDIEFGKQVHDDAVKDGYKLDLFVLNSLITMYARCGSYE 623
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
+ VF M + WNSMIG E + LF +M G++ D LN++
Sbjct: 624 LSRQVFDK--MSDRNGICWNSMIGACLITERYDEGVKLFWQMSGEGIRLDRAALLNVM 679
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Query: 139 KPNEVTMVSVLCAC--AHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEA 196
P +V + C + L + +H ++ + L L L T+LV Y G I A
Sbjct: 465 SPQQVVLSPDTCISLIKNTSGLHSLKALHASMLRSYLHLNLYFFTNLVAQYTSLGFISHA 524
Query: 197 LHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
+F + P+D F+WN MI GF H +++ L+ +M + +KP T + AC
Sbjct: 525 YSLFSTS--NPTDAFLWNVMIRGFVDHAQYYDAILLYRQMVQLSIKPTNFTLTFVFKACG 582
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAG--YESDRFVSNSLIHMYSSFRDIPNAR 65
PD +T + +A L + A+HG + G + S+ V ++ +Y+ + AR
Sbjct: 768 PDSVTLLSVVRACTILASLQHAHAVHGIVIVTGGFFNSELAVETAVTDLYAKCGSLTYAR 827
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPE 104
KVFD + +N++SW++++ GY G R+ DL E
Sbjct: 828 KVFDRMQNRNIISWSAIISGYGMHGH---GREALDLFNE 863
>29726.m004047 pentatricopeptide repeat-containing protein, putative
Length = 901
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 151/334 (45%), Gaps = 13/334 (3%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML P+ + + L K+ ++E G I + G D + N+ + +
Sbjct: 503 MLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGE 562
Query: 61 IPNARKVFDGIP----VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSC 112
R +F+ I + +++S++ ++ G K G ++F M EQ D +++
Sbjct: 563 TGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNT 622
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
IDG+ + G ++A + EEM+ G +P VT SV+ A + LD+ M+ N
Sbjct: 623 FIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNG 682
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESL 230
L L +V+ +SL+D + K G I EA + + K +V+ WN ++ + E+L
Sbjct: 683 LELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEAL 742
Query: 231 DLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVM 290
F M + P+ ITY L++ +A+ F+ + K G+ P + Y M+ +
Sbjct: 743 VCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGL 802
Query: 291 ARAGQVAEAYQFLCQIPIQ---PTASMLGALLNG 321
A+AG +AEA + P ++ A++ G
Sbjct: 803 AKAGNIAEASSLFERFKANGGVPDSASYNAIIEG 836
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 159/368 (43%), Gaps = 18/368 (4%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVK----NLVSWNSM 82
E + + +AG + N +I + + A +F+G+ K + V++ S+
Sbjct: 424 EAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSL 483
Query: 83 LDGYAKCGDISMARQVFDLMPEQD----VLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP 138
+DG K G + A ++++ M + D + ++ LI + + G ++ +F+EM G
Sbjct: 484 IDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGC 543
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
P+ + + + G KGR + + ++ + L+ K G +E
Sbjct: 544 SPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYE 603
Query: 199 VFRSGLMKPS----DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
+F + MK D +N+ I GF G V ++ L EM G +P +TY +++
Sbjct: 604 LFYA--MKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDG 661
Query: 255 CAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY---QFLCQIPIQPT 311
A + EA+ F+ NG+ Y+ ++D + G++ EAY + L Q + P
Sbjct: 662 LAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPN 721
Query: 312 ASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDG-RYVGLSNVYAIFRRWDKARSMRE 370
LL+ + +++ A + + L+ + Y L N R+++KA +
Sbjct: 722 VYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQ 781
Query: 371 AMERMGVK 378
M++ G+K
Sbjct: 782 EMQKQGLK 789
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/390 (18%), Positives = 163/390 (41%), Gaps = 29/390 (7%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P + L A + + + ++ L + + + GYE + ++I +++ + A +
Sbjct: 196 PAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSL 255
Query: 68 FDGIPVK----NLVSWNSMLDGYAKCGDISMARQVF------DLMPEQDVLSWSCLIDGY 117
D + ++V +N +D + K G + MA + F L+P D ++++ +I
Sbjct: 256 LDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLP--DDVTYTSMIGVL 313
Query: 118 VRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-RMMHHYVIDNELPLT 176
+ DEA+ +FE+M + P +++ G D+ ++ +P +
Sbjct: 314 CKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIP-S 372
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS---DVFIWNSMIGGFACHGLVKESLDLF 233
++ ++ K G + EAL F MK ++ +N +I G V+ + +
Sbjct: 373 VIAYNCILTCLGKKGRLGEALRTFEE--MKKDAAPNLSTYNVLIDMLCKAGEVEAAFKVR 430
Query: 234 SEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARA 293
M G+ P+ +T ++ + EA F+ + +P + ++D + +
Sbjct: 431 DAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQ 490
Query: 294 GQVAEAYQFLCQIPIQ---PTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYV 350
G+V +AY+ Q+ P A + +L+ G+ + + +++I D R
Sbjct: 491 GRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLR-- 548
Query: 351 GLSNVY--AIFRRWD--KARSMREAMERMG 376
L N Y +F+ + K R++ E ++ G
Sbjct: 549 -LLNAYMDCVFKAGETGKGRALFEEIKSRG 577
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 87/195 (44%), Gaps = 6/195 (3%)
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LI ++ E + + MR +P +++ A + + D + H + +
Sbjct: 169 LILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELG 228
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP----SDVFIWNSMIGGFACHGLVKE 228
+++ L T+++ ++A+ G + AL + MK +D+ ++N I F G V
Sbjct: 229 YEVSVHLFTTVIRVFAREGRLDAALSLLDE--MKSNCLHADIVLYNVCIDCFGKAGKVDM 286
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVD 288
+ F E+ G+ PD++TY +++ G + EA F+ + +N P + Y M+
Sbjct: 287 AWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIM 346
Query: 289 VMARAGQVAEAYQFL 303
AG+ EAY L
Sbjct: 347 GYGSAGKFDEAYSLL 361
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 87/217 (40%), Gaps = 7/217 (3%)
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
K DY E + EM ++G P+ T + ++ +C L +G + + +
Sbjct: 143 KFDYFEQ--ILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSA 200
Query: 180 RTSLVDMYAKCGAIQEALHVFRS--GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
T+L+ + L +F L V ++ ++I FA G + +L L EM
Sbjct: 201 YTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMK 260
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVA 297
+ D + Y + G V AW FF + +G+ P Y M+ V+ + ++
Sbjct: 261 SNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLD 320
Query: 298 EAYQFLCQIPIQ---PTASMLGALLNGCMNHGKLDLA 331
EA + Q+ P A ++ G + GK D A
Sbjct: 321 EAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEA 357
>28320.m001118 pentatricopeptide repeat-containing protein, putative
Length = 576
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 186/425 (43%), Gaps = 49/425 (11%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
GV D +T+ + + + + GL +H I K G + + FV N+LI MYS
Sbjct: 171 GVVFDAVTYTTVLAFCSRIEEFLFGLQLHSCILKVGLDCEVFVGNALITMYSR------- 223
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
W +L+ A +VF+ M D++SW+ +I GY + G Y
Sbjct: 224 --------------WGCLLE----------AGRVFEEMQTTDLVSWNAIISGYTQAGIYG 259
Query: 125 -EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
EA+++F EM G K + V+ S + AC H L+ GR +H I + + L
Sbjct: 260 LEAISIFIEMVRRGIKLDHVSFTSAISACGHERNLEVGRQVHGLSIKRGYGKHVSVGNVL 319
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKE--SLDLFSEMHIVGV 241
+ Y+KC I++A VF++ M +V W +MI + E ++ F+EM V
Sbjct: 320 ISTYSKCEIIEDAKLVFQN--MLERNVVSWTTMIS-------IDEENAVSFFNEMRYDEV 370
Query: 242 KPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQ 301
P+++T++ L+ A G LV+ K+G + + + + A+ G ++ +
Sbjct: 371 DPNDVTFVGLIHAITIGDLVESGKTVHGFCIKSGFSLEPSVQNSFITMYAKFGSAEDSMK 430
Query: 302 FLCQIPIQPTASMLGALLNGCMNHG-KLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFR 360
++ + + AL++G +G + T L E +P+Q LS + A
Sbjct: 431 VFEELNYREIITW-NALISGYAQNGLSQEAIITFFSALAESKPNQYTFGSVLSAIGAAED 489
Query: 361 RWDKARSMREA-MERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
K M A + ++G P S + R DKSHP SE+I + + S+M
Sbjct: 490 ISLKHGQMCHAQIMKLGFNSDPVVSSALLDMYAKR---GDKSHPQSEEICRIADCLGSEM 546
Query: 420 KHIVD 424
K + D
Sbjct: 547 KFLRD 551
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 124/256 (48%), Gaps = 43/256 (16%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKR--ELGLAIHGYITKAGYESDRFVSNSLIHMYSSF 58
M+R G+ DH++F + SAC +R E+G +HG K GY V N LI YS
Sbjct: 269 MVRRGIKLDHVSFT--SAISACGHERNLEVGRQVHGLSIKRGYGKHVSVGNVLISTYSKC 326
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
I +A+ VF + +N+VSW +M IS+
Sbjct: 327 EIIEDAKLVFQNMLERNVVSWTTM---------ISI------------------------ 353
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
D + A++ F EMR PN+VT V ++ A ++ G+ +H + I + L
Sbjct: 354 ---DEENAVSFFNEMRYDEVDPNDVTFVGLIHAITIGDLVESGKTVHGFCIKSGFSLEPS 410
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
++ S + MYAK G+ ++++ VF + ++ WN++I G+A +GL +E++ F +
Sbjct: 411 VQNSFITMYAKFGSAEDSMKVFEE--LNYREIITWNALISGYAQNGLSQEAIITFFSA-L 467
Query: 239 VGVKPDEITYLNLLSA 254
KP++ T+ ++LSA
Sbjct: 468 AESKPNQYTFGSVLSA 483
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 119/250 (47%), Gaps = 39/250 (15%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D +T K+ C + LG IHG+ +G +YS F +PN
Sbjct: 79 DEVTIALALKS--CCGDKLLGSQIHGFAITSG-------------LYS-FITVPN----- 117
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
S+++ Y K G + A +F+ + + D++SW+ ++ G+ R +EAL
Sbjct: 118 ------------SLMNMYCKSGQFTHALCIFETLNDPDIVSWNTVLSGFQRS---EEALN 162
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
+M +G + VT +VL C+ + G +H ++ L + + +L+ MY+
Sbjct: 163 FALKMNSNGVVFDAVTYTTVLAFCSRIEEFLFGLQLHSCILKVGLDCEVFVGNALITMYS 222
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK-ESLDLFSEMHIVGVKPDEIT 247
+ G + EA VF M+ +D+ WN++I G+ G+ E++ +F EM G+K D ++
Sbjct: 223 RWGCLLEAGRVFEE--MQTTDLVSWNAIISGYTQAGIYGLEAISIFIEMVRRGIKLDHVS 280
Query: 248 YLNLLSACAH 257
+ + +SAC H
Sbjct: 281 FTSAISACGH 290
>29691.m000280 pentatricopeptide repeat-containing protein, putative
Length = 347
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 115/231 (49%), Gaps = 34/231 (14%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D +T+ + ACL +LGL +HG + + + D +V+++ I+MY
Sbjct: 140 DIVTYVNVFGLCACLKNLKLGLQVHGRMLMSNVKCDAYVNSAAINMY------------- 186
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
+CGD A +VFD + Q+V+ W+ I Y G +++AL
Sbjct: 187 ------------------GRCGDALNAHRVFDGLQNQNVVLWTAAITAYFHNGCFEKALN 228
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
+F +M+ + NE+T +L A A L AL G ++H + + +++ +L++MYA
Sbjct: 229 LFAKMQFEDTRANEITFAVLLNASAGLSALRHGHLLHACIEKSGFKDHIIVGNALINMYA 288
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
K G I+ A +F M DV WN+MI G++ HGL K++L F +H+V
Sbjct: 289 KGGIIKSAYIIFSD--MINRDVITWNAMICGYSHHGLGKDALRGF-YLHVV 336
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 142/321 (44%), Gaps = 34/321 (10%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
+ P+ F + + + E+G+ HG+ K+G ++V N+LIHMYS
Sbjct: 36 ISPNEYIFATALSSCSDSGRIEVGIQCHGFAFKSGLVFHQYVRNALIHMYS--------- 86
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
KC I A ++ D +P D+ +++ ++ G + G E
Sbjct: 87 ----------------------KCLTIQEAMRISDSVPRNDIFAYNSVLIGLMENGYLME 124
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
L + +M + + + VT V+V CA L L G +H ++ + + + ++ ++
Sbjct: 125 GLEILRKMVIENVEWDIVTYVNVFGLCACLKNLKLGLQVHGRMLMSNVKCDAYVNSAAIN 184
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MY +CG A VF ++ +V +W + I + +G +++L+LF++M + +E
Sbjct: 185 MYGRCGDALNAHRVFDG--LQNQNVVLWTAAITAYFHNGCFEKALNLFAKMQFEDTRANE 242
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQ 305
IT+ LL+A A ++ C+ K+G ++++ A+ G + AY
Sbjct: 243 ITFAVLLNASAGLSALRHGHLLHACIEKSGFKDHIIVGNALINMYAKGGIIKSAYIIFSD 302
Query: 306 IPIQPTASMLGALLNGCMNHG 326
+ I A++ G +HG
Sbjct: 303 M-INRDVITWNAMICGYSHHG 322
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 85/153 (55%), Gaps = 3/153 (1%)
Query: 105 QDVLSWSCLIDGYVRKGDYDEALAVFEEMRV-SGPKPNEVTMVSVLCACAHLGALDKGRM 163
++V+SWS L+ GY+ G E +++ + M S PNE + L +C+ G ++ G
Sbjct: 2 RNVVSWSALMAGYLHNGFSLEVISLLKHMIAESDISPNEYIFATALSSCSDSGRIEVGIQ 61
Query: 164 MHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
H + + L +R +L+ MY+KC IQEA+ + S + +D+F +NS++ G +
Sbjct: 62 CHGFAFKSGLVFHQYVRNALIHMYSKCLTIQEAMRISDS--VPRNDIFAYNSVLIGLMEN 119
Query: 224 GLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
G + E L++ +M I V+ D +TY+N+ CA
Sbjct: 120 GYLMEGLEILRKMVIENVEWDIVTYVNVFGLCA 152
>30169.m006320 pentatricopeptide repeat-containing protein, putative
Length = 922
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 116/259 (44%), Gaps = 38/259 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKA---SACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSS 57
M +G+ P F L A S C+L G+ +H I K G D FV SL+H Y +
Sbjct: 305 MRDLGIKPTGFAFASLVTACDRSGCMLSE--GIQVHDLIVKFGMLCDVFVGTSLLHFYGT 362
Query: 58 FRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGY 117
+ NAR+VF N MLD ++V+SW+ L+ Y
Sbjct: 363 YGLAFNARRVF-----------NEMLD--------------------KNVVSWTALMVAY 391
Query: 118 VRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
GD E + ++ EMR G N T+ +V+ +CA L G + +VI + L +
Sbjct: 392 SDFGDPMEVMNIYCEMRCEGLSGNANTLATVISSCASLEDEFLGHQILGHVIKSGLGTNV 451
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
+ SL+ M+ G QEA ++F G M D+ WNSMI + +GL +ESL F M
Sbjct: 452 SVENSLISMFGSFGRAQEACYIF--GGMNEHDIISWNSMISVYVQNGLFEESLRCFYWMQ 509
Query: 238 IVGVKPDEITYLNLLSACA 256
V + T LLS C
Sbjct: 510 HVHNHINSTTLSTLLSECG 528
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 136/268 (50%), Gaps = 5/268 (1%)
Query: 74 KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM 133
++L+ N+++ YAK G A++VF +M +D ++W+ LI G+ + DEA+ F+ M
Sbjct: 651 ESLIVSNALVTLYAKSGTTIEAKKVFQMMSRRDEVTWNALIGGHANNRESDEAVKAFKLM 710
Query: 134 RVSGPKPNEVTMVSVLCA-CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
R P + +T+ +VL A A L G +H Y + L ++ SL+ MYAKCG
Sbjct: 711 REDIP-ASYITIANVLGALLAPTDLLKHGMPIHAYTVMIGLESDQYVQNSLITMYAKCGD 769
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
+ + +F GL+ + V WN+++ A HG ++ESL L +M GV D+ ++ L
Sbjct: 770 LNSSNCIF-DGLINKNAV-AWNTVMAANAYHGQMEESLKLLVKMRHAGVDLDQFSFSGCL 827
Query: 253 SACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTA 312
SA A +++E K G ++D+ A+ G++ + + + Q P++ +
Sbjct: 828 SATATLAMLEEGQQLQSLAVKLGFDSDPFVTNALMDMYAKCGELDDVLRIIPQ-PLERSR 886
Query: 313 SMLGALLNGCMNHGKLDLAETVGRKLIE 340
L++ HG + A+ ++++
Sbjct: 887 LSWNTLISSFARHGNFERAKETFHEMLK 914
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 33/216 (15%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G+ IH Y G ESD++V NSLI MY AK
Sbjct: 738 GMPIHAYTVMIGLESDQYVQNSLITMY-------------------------------AK 766
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
CGD++ + +FD + ++ ++W+ ++ G +E+L + +MR +G ++ +
Sbjct: 767 CGDLNSSNCIFDGLINKNAVAWNTVMAANAYHGQMEESLKLLVKMRHAGVDLDQFSFSGC 826
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
L A A L L++G+ + + + +L+DMYAKCG + + L + L +
Sbjct: 827 LSATATLAMLEEGQQLQSLAVKLGFDSDPFVTNALMDMYAKCGELDDVLRIIPQPLERSR 886
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
WN++I FA HG + + + F EM GV PD
Sbjct: 887 --LSWNTLISSFARHGNFERAKETFHEMLKCGVTPD 920
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 147/344 (42%), Gaps = 37/344 (10%)
Query: 12 TFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGI 71
T + + A L LG I G++ K+G ++ V NSLI M+ SF A +F G
Sbjct: 418 TLATVISSCASLEDEFLGHQILGHVIKSGLGTNVSVENSLISMFGSFGRAQEACYIFGG- 476
Query: 72 PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFE 131
M E D++SW+ +I YV+ G ++E+L F
Sbjct: 477 ------------------------------MNEHDIISWNSMISVYVQNGLFEESLRCFY 506
Query: 132 EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG 191
M+ N T+ ++L C + L GR +H VI + + + +L+ MY+ G
Sbjct: 507 WMQHVHNHINSTTLSTLLSECGSVDNLKWGRGIHSLVIKFGMDSNICICNTLIAMYSGAG 566
Query: 192 AIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
+ A VF+ M D+ WNSM+ +A G ++L +F+ + + + +T+ +
Sbjct: 567 KSEHADLVFQK--MAERDLISWNSMLACYAQDGKSLDALKIFTRIFHMKKGANFVTFTSA 624
Query: 252 LSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPT 311
L+AC+ + E + G+ +V + A++G EA + Q+ +
Sbjct: 625 LAACSDPDFIAEGRILHALVILTGLHESLIVSNALVTLYAKSGTTIEAKKVF-QMMSRRD 683
Query: 312 ASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNV 355
AL+ G N+ + D A + + E P Y+ ++NV
Sbjct: 684 EVTWNALIGGHANNRESDEAVKAFKLMREDIP---ASYITIANV 724
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 91/180 (50%), Gaps = 3/180 (1%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
N+ N+++ Y+ G A VF M E+D++SW+ ++ Y + G +AL +F +
Sbjct: 551 NICICNTLIAMYSGAGKSEHADLVFQKMAERDLISWNSMLACYAQDGKSLDALKIFTRIF 610
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
N VT S L AC+ + +GR++H VI L +L++ +LV +YAK G
Sbjct: 611 HMKKGANFVTFTSALAACSDPDFIAEGRILHALVILTGLHESLIVSNALVTLYAKSGTTI 670
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
EA VF+ +M D WN++IGG A + E++ F M + IT N+L A
Sbjct: 671 EAKKVFQ--MMSRRDEVTWNALIGGHANNRESDEAVKAFKLMR-EDIPASYITIANVLGA 727
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 93/178 (52%), Gaps = 3/178 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N++++ Y+K G I +AR VFD M E++ SW+ +I Y+ G Y E++ +F +MR G K
Sbjct: 252 NTLINMYSKFGYICLARYVFDEMSEKNEASWNHIISAYLHAGLYRESIGLFNDMRDLGIK 311
Query: 140 PNEVTMVSVLCACAHLGA-LDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
P S++ AC G L +G +H ++ + + + TSL+ Y G A
Sbjct: 312 PTGFAFASLVTACDRSGCMLSEGIQVHDLIVKFGMLCDVFVGTSLLHFYGTYGLAFNARR 371
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
VF L K +V W +++ ++ G E ++++ EM G+ + T ++S+CA
Sbjct: 372 VFNEMLDK--NVVSWTALMVAYSDFGDPMEVMNIYCEMRCEGLSGNANTLATVISSCA 427
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
G+ +H I L + +L++MY+K G I A +VF M + WN +I +
Sbjct: 232 GKALHALCIKGLANLGVFYNNTLINMYSKFGYICLARYVFDE--MSEKNEASWNHIISAY 289
Query: 221 ACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG-LVKEAWYFFDCLGKNGM 276
GL +ES+ LF++M +G+KP + +L++AC G ++ E D + K GM
Sbjct: 290 LHAGLYRESIGLFNDMRDLGIKPTGFAFASLVTACDRSGCMLSEGIQVHDLIVKFGM 346
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M GV D +F A+A L E G + K G++SD FV+N+L+ MY+ +
Sbjct: 811 MRHAGVDLDQFSFSGCLSATATLAMLEEGQQLQSLAVKLGFDSDPFVTNALMDMYAKCGE 870
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLM 102
+ + ++ ++ +SWN+++ +A+ G+ A++ F M
Sbjct: 871 LDDVLRIIPQPLERSRLSWNTLISSFARHGNFERAKETFHEM 912
>29736.m002066 pentatricopeptide repeat-containing protein, putative
Length = 604
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 159/335 (47%), Gaps = 16/335 (4%)
Query: 56 SSFRDIPN-ARKVFDGIP----VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----D 106
SS RD+ KVF P N S+N +++ + G I A + M + D
Sbjct: 85 SSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPD 144
Query: 107 VLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHH 166
V+S++ +IDGY G+ + + + +EM++ G KPN T S++ G + +G +
Sbjct: 145 VVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLR 204
Query: 167 YVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP--SDVFIWNSMIGGFACHG 224
++ + V+ T+L+D + K G Q A +F + D ++++I G + G
Sbjct: 205 EMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSG 264
Query: 225 LVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYA 284
V E+ LF+EM G +PDE+TY L+ G +K+A++ + + + G+TP Y
Sbjct: 265 KVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYT 324
Query: 285 CMVDVMARAGQVAEAYQFL---CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIEL 341
+ D + ++G++ A + L C+ +Q S ++NG G + A + ++ E
Sbjct: 325 ALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEA 384
Query: 342 EPHQDG-RYVGLSNVYAIFRRWDKARS-MREAMER 374
H D Y L + Y KAR +RE ++R
Sbjct: 385 GLHPDTITYTTLMDAYYKTGEMVKARELLREMLDR 419
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 143/307 (46%), Gaps = 20/307 (6%)
Query: 77 VSWNSMLDGYAKCGDISMARQVFDLMPEQDV----LSWSCLIDGYVRKGDYDEALAVFEE 132
V + +++DG+ K G+ A ++F M +++ +++S LI G G EA +F E
Sbjct: 216 VIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNE 275
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
M G +P+EVT +++ LG + K +H+ ++ L +V T+L D K G
Sbjct: 276 MIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGE 335
Query: 193 I---QEALH-VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
+ E LH + R GL ++ +N+++ G G + +++ L EM G+ PD ITY
Sbjct: 336 LDTANELLHEMCRKGL--QLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITY 393
Query: 249 LNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL---CQ 305
L+ A G + +A + G+ P + +++ + +G++ + + L +
Sbjct: 394 TTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLE 453
Query: 306 IPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWD-K 364
I P A+ +++ + ++ + R + D SN Y I + K
Sbjct: 454 KGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPD------SNTYNILIKGHCK 507
Query: 365 ARSMREA 371
AR+M+EA
Sbjct: 508 ARNMKEA 514
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 163/373 (43%), Gaps = 21/373 (5%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M++ GVFPDH+ + L L + + + D ++LI S
Sbjct: 206 MMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGK 265
Query: 61 IPNARKVFDGIPVKNL----VSWNSMLDGYAKCGDISMA----RQVFDLMPEQDVLSWSC 112
+ A K+F+ + K V++ +++DGY K G++ A Q+ + +V++++
Sbjct: 266 VVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTA 325
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
L DG + G+ D A + EM G + N T +++ G + + + + +
Sbjct: 326 LADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAG 385
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL---MKPSDVFIWNSMIGGFACHGLVKES 229
L + T+L+D Y K G + +A + R L ++P+ V +N ++ G G +++
Sbjct: 386 LHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPT-VVTFNVLMNGLCMSGKLEDG 444
Query: 230 LDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDV 289
L M G+ P+ TY +++ ++ + + + G+ P S Y ++
Sbjct: 445 ERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKG 504
Query: 290 MARAGQVAEAY---QFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQD 346
+A + EA+ + + + TAS AL+ G KL A R+L E E ++
Sbjct: 505 HCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEA----RQLFE-EMRRE 559
Query: 347 GRYVGLSNVYAIF 359
G V + +Y +F
Sbjct: 560 G-LVASAEIYNLF 571
>27985.m000884 pentatricopeptide repeat-containing protein, putative
Length = 504
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 176/397 (44%), Gaps = 28/397 (7%)
Query: 2 LRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDI 61
++ G P+ +T L K K L + +T++G++ D + LI+ R
Sbjct: 1 MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60
Query: 62 PNA----RKVFDGIPVKNLVSWNSMLDGYAKCG----DISMARQVFDLMPEQDVLSWSCL 113
A R++ I N ++ ++D K G + M R++ ++ +V+ +S L
Sbjct: 61 RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120
Query: 114 IDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-RMMHHYVIDNE 172
I+G R G EA+ +F+EM G K N +T S++ A G + R V +
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESL 230
LP +V T+L+D +K G +QEA +F + + ++ +NS++ G H + ++
Sbjct: 181 LP-DVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAV 239
Query: 231 DLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVM 290
LF M G+K D I+Y L++ G +EA F + +TP Y ++ +
Sbjct: 240 RLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKAL 299
Query: 291 ARAGQVAEAYQFLCQIPI---QPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDG 347
+ G++ A + + I P+ LL+G +G ++ A V R L +
Sbjct: 300 YQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSI------ 353
Query: 348 RYVGLSNVYAIF-------RRWDKARSMREAMERMGV 377
+Y +Y+I RRW+ A + + + +G+
Sbjct: 354 KYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGL 390
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 137/276 (49%), Gaps = 14/276 (5%)
Query: 40 GYESDRFVSNSLIHMYSSFRDIPNARKVFDGI----PVKNLVSWNSMLDGYAKCGDISMA 95
G D +LI S + A K+F+ + N+V++NS+L+G + A
Sbjct: 179 GILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHA 238
Query: 96 RQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
++F++M E+ DV+S++ LI+GY G +EA+ +F +M+ P+ T +L A
Sbjct: 239 VRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKA 298
Query: 152 CAHLGALDKGR-MMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRS---GLMKP 207
G + + + ++ I + P +L T L+D K G I+EA+ VFRS KP
Sbjct: 299 LYQNGRIRTAKELFNNMQICGQSP-SLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKP 357
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYF 267
S + I++ +IGG + ++++F E+ VG+ P+ +TY +++ G + EA
Sbjct: 358 S-IRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERL 416
Query: 268 FDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
F + ++G + ++ + QV +A +FL
Sbjct: 417 FVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFL 452
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 145/317 (45%), Gaps = 12/317 (3%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ +G+ P+ + + L + K + + + G +++ NSLIH F
Sbjct: 105 MINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGL 164
Query: 61 IPNARKVF-----DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWS 111
A + F +GI + ++V++ +++D +K G + A ++F+LM +Q ++++++
Sbjct: 165 WKEATRTFSQMVGEGI-LPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYN 223
Query: 112 CLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN 171
L++G D A+ +FE M G K + ++ +++ G ++ + +
Sbjct: 224 SLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYE 283
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM--KPSDVFIWNSMIGGFACHGLVKES 229
EL ++ T L+ + G I+ A +F + + + + + ++ G +G ++E+
Sbjct: 284 ELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEA 343
Query: 230 LDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDV 289
+D+F + + KP Y L+ + A FD + G+ P Y M++
Sbjct: 344 IDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMING 403
Query: 290 MARAGQVAEAYQFLCQI 306
+ + G++ EA + Q+
Sbjct: 404 LCKEGKLLEAERLFVQM 420
>29815.m000490 pentatricopeptide repeat-containing protein, putative
Length = 537
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 131/258 (50%), Gaps = 30/258 (11%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGY 86
+L A+H I K G D + N+L+ Y + +A +VF G+ ++VS++S++ +
Sbjct: 102 DLARALHASILKLG--EDTHLGNALVVAYLKLGLVLDAYEVFKGLCNPDVVSYSSLISSF 159
Query: 87 AK---------------------CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
AK G + +A +VF+ MPE++ +S++ L+ G+ G+ +
Sbjct: 160 AKGNQEMKAIELFFRMRSSAYMEFGLVDLAVEVFEKMPERNSVSYNALLAGFCNNGEGLK 219
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
AL +F +M G + +E T+ SV+ AC L L+ R +H +++ + T+L+D
Sbjct: 220 ALDLFIKMVQEGAELSEFTLTSVITACGILRTLEISRQIHGFIMKFGFGSNACIETALLD 279
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF----SEMHIVGV 241
MY +CG + +A +FRS + I SM+ G+A +G+ E++ LF SE +V
Sbjct: 280 MYTRCGRMNDADKMFRSWPSDRDSLVIQTSMLCGYARNGMPNEAVSLFQLSLSEGTMV-- 337
Query: 242 KPDEITYLNLLSACAHGG 259
DE+ ++L C G
Sbjct: 338 -VDEVALTSVLGVCGTLG 354
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 121/299 (40%), Gaps = 48/299 (16%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M++ G T + A L E+ IHG+I K G+ S+ + +L
Sbjct: 227 MVQEGAELSEFTLTSVITACGILRTLEISRQIHGFIMKFGFGSNACIETAL--------- 277
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMP--EQDVLSWSCLIDGYV 118
LD Y +CG ++ A ++F P ++ + ++ GY
Sbjct: 278 ----------------------LDMYTRCGRMNDADKMFRSWPSDRDSLVIQTSMLCGYA 315
Query: 119 RKGDYDEALAVFEEMRVSGPKP-NEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
R G +EA+++F+ G +EV + SVL C LG+ + G +H + + L
Sbjct: 316 RNGMPNEAVSLFQLSLSEGTMVVDEVALTSVLGVCGTLGSQEMGEQIHCHALKTGFLADL 375
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
+ S++ MY+KC + +A+ F M DV WN +I G H E+L ++S M
Sbjct: 376 GVGNSIISMYSKCCNMNKAIKSFND--MLAHDVVSWNCLIAGHLLHRQGDEALAVWSRME 433
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDV-MARAGQ 295
T +L+ C FF + P SEHYA + + R G+
Sbjct: 434 KAAYSH---TRSDLVEDCRD--------LFFSMKNIYEVEPTSEHYASFKRITVVRGGE 481
>30170.m013985 pentatricopeptide repeat-containing protein, putative
Length = 947
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 156/330 (47%), Gaps = 17/330 (5%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQV------FDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
NL N++++GY K G +S A ++ +DL PE S+S L+DG+ R+G +A++
Sbjct: 358 NLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPES--YSYSTLMDGFCREGLVTKAIS 415
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
V+ EM G + N VT S+L +GA + + H ++ + V +L+D+
Sbjct: 416 VYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLF 475
Query: 189 KCGAIQEALHVFRSGLMKP--SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
K G AL ++ L + + +N+MI GF + E+ + F+ M +G +PD +
Sbjct: 476 KMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGV 535
Query: 247 TYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL--- 303
TY L+ G V+EA+ + + K + P E Y ++ + ++ + E L
Sbjct: 536 TYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEM 595
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFR--R 361
C + P G L+ G + G+LD A T +IE + + V +++R R
Sbjct: 596 CLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIE-KGFAPNVIICSKIVSSLYRLGR 654
Query: 362 WDKARSMREAMERMGVKKSPGYSFVEMHGA 391
D+A + + M + V GY F +H A
Sbjct: 655 IDEANMLLQKMVNLDVFLDHGY-FDRLHKA 683
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 159/330 (48%), Gaps = 18/330 (5%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL----SWSCLIDGYVRKGDYDEALAVF 130
N+V++NS++DG GD+ A V LM E+ +L + + LI GY R+ +EA V
Sbjct: 252 NVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVL 311
Query: 131 EEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAK 189
EM R G +E ++ + +D + +++ L + L + +L++ Y K
Sbjct: 312 REMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCK 371
Query: 190 CGAIQEALHVFRSGL---MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
G + EA + + ++P + + +++++ GF GLV +++ +++EM VG++ + +
Sbjct: 372 NGQVSEAERLLMRMVDWDLEP-ESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVV 430
Query: 247 TYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
T+ +LL G ++A + + + K G+TP Y ++D++ + G+ A I
Sbjct: 431 THNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDI 490
Query: 307 PIQ---PTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDG-RYVGLSNVYAIFRRW 362
+ + ++NG K+ AE ++ EL DG Y L + Y
Sbjct: 491 LARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNV 550
Query: 363 DKARSMREAMERMGVKKSPGYSFVEMHGAL 392
++A ++E ME+ + S +E++ +L
Sbjct: 551 EEAFKVKEKMEKEAILPS-----IELYNSL 575
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/388 (20%), Positives = 159/388 (40%), Gaps = 48/388 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML+ GV PD +++ L + + LA+ I GY + N++I+ +
Sbjct: 455 MLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEK 514
Query: 61 IPNARKVFDGIPVKNL----VSWNSMLDGYAKCGDISMARQVFDLMPEQDVLS----WSC 112
+ A + F+ + V++ +++DGY K G++ A +V + M ++ +L ++
Sbjct: 515 MIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNS 574
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LI G + E + + EM + G PN VT +++ G LDK + +I+
Sbjct: 575 LIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKG 634
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEA---------------------LHVFRSGLMKPSDV- 210
+++ + +V + G I EA LH G + +
Sbjct: 635 FAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIA 694
Query: 211 ---------------FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC 255
++N I G G V ++ +FS + + G PD TY L+
Sbjct: 695 DTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGY 754
Query: 256 AHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ---PTA 312
+ G V +A+ D + K G+ P Y +++ + ++G + A + ++ ++ P
Sbjct: 755 SAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNV 814
Query: 313 SMLGALLNGCMNHGKLDLAETVGRKLIE 340
L++G +G A + K+++
Sbjct: 815 ISYNILIDGYCKNGNTREALDLRNKMLK 842
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 11/180 (6%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+L G PD+ T+ L + ++ + K G + N+LI+ +
Sbjct: 735 LLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGN 794
Query: 61 IPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDV----LSWSC 112
+ A+K+FD + +K N++S+N ++DGY K G+ A + + M ++ + +++S
Sbjct: 795 LDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSA 854
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL---CACAHLGALDKGRMMHHYVI 169
LI G+ ++GD +A + +EMR N V ++ C + + K M H I
Sbjct: 855 LIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMMHITI 914
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 38/193 (19%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVF 130
N V +N + G K G + A+++F + + D ++ LI GY G+ ++A ++
Sbjct: 708 NSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLR 767
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
+EM G PN +T +++ G LD+ + +
Sbjct: 768 DEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLF------------------------- 802
Query: 191 GAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLN 250
+ LH+ GL +V +N +I G+ +G +E+LDL ++M G+ P ITY
Sbjct: 803 ----DKLHL--KGL--APNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSA 854
Query: 251 LLSA-CAHGGLVK 262
L+ C G + K
Sbjct: 855 LIYGFCKQGDMGK 867
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 77/185 (41%), Gaps = 4/185 (2%)
Query: 122 DYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRT 181
D + +E S PN V + G +D + + ++
Sbjct: 689 DSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYC 748
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMK---PSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+L+ Y+ G + +A + R ++K ++ +N++I G G + + LF ++H+
Sbjct: 749 TLIHGYSAAGNVNDAFSL-RDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHL 807
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAE 298
G+ P+ I+Y L+ G +EA + + K G++P Y+ ++ + G + +
Sbjct: 808 KGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGK 867
Query: 299 AYQFL 303
A L
Sbjct: 868 ATNLL 872
>29938.m000599 pentatricopeptide repeat-containing protein, putative
Length = 208
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 100/202 (49%), Gaps = 3/202 (1%)
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
M ++V+SW+ +ID + G +EAL VF M++S +P+ V M +L C + AL G
Sbjct: 1 MENRNVISWTAMIDSHAENGYTNEALCVFRSMQLSKHRPDSVVMARMLSVCGKMKALKLG 60
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA 221
+ +H + + + +V MY CG A F + +K S W ++I
Sbjct: 61 KEIHGHALKKHCESIPFVSAEIVRMYGSCGLNHIAKSFFHAIPVKGS--MAWTAIIEAHG 118
Query: 222 CHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKS 280
+ L ++++ LF EM G P T+ +L+ C G +A F+ + + +
Sbjct: 119 HNNLQRDAIHLFHEMISGGFTPTHFTFTVVLNICDQAGFADDACRIFELMSRRYKIKASE 178
Query: 281 EHYACMVDVMARAGQVAEAYQF 302
EHY+ ++ ++ RAG++ EA +F
Sbjct: 179 EHYSVLIGLLTRAGRIQEAKKF 200
>30076.m004632 pentatricopeptide repeat-containing protein, putative
Length = 878
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 135/270 (50%), Gaps = 20/270 (7%)
Query: 40 GYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMA 95
G + DR NSL+ + S AR++F + K ++ ++N++LD K G + +A
Sbjct: 291 GVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLA 350
Query: 96 RQVFDLMPEQDVL----SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
++ MP +++L ++S +IDGY + G D+AL +F EM+ G + V+ ++L
Sbjct: 351 FEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSV 410
Query: 152 CAHLG----ALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF---RSGL 204
A LG ALD + M + I ++ V +L+ Y K E VF + G
Sbjct: 411 YAKLGRFEQALDVCKEMENAGIRKDV----VTYNALLAGYGKQYRYDEVRRVFEEMKRGR 466
Query: 205 MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEA 264
+ P ++ ++++I ++ GL KE++++F E G+K D + Y L+ A GLV+ +
Sbjct: 467 VSP-NLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESS 525
Query: 265 WYFFDCLGKNGMTPKSEHYACMVDVMARAG 294
D + K G+ P Y ++D R+
Sbjct: 526 VTLLDEMTKEGIRPNVVTYNSIIDAFGRSA 555
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 164/368 (44%), Gaps = 52/368 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML GV PD +TF L + E + + G + D F N+L+
Sbjct: 287 MLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQ 346
Query: 61 IPNARKVFDGIPVKNL----VSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSC 112
+ A ++ +P KN+ V++++M+DGYAK G + A +F+ M D +S++
Sbjct: 347 MDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNT 406
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
L+ Y + G +++AL V +EM +G + + VT ++L D+ R + +
Sbjct: 407 LLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGR 466
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFR----SGLMKPSDVFIWNSMIGGFACHGLVKE 228
+ L+ ++L+D+Y+K G +EA+ VFR +GL +DV +++++I +GLV+
Sbjct: 467 VSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGL--KADVVLYSALIDALCKNGLVES 524
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVD 288
S+ L EM G++P+ +TY +++ A G A D G+ + E + +V
Sbjct: 525 SVTLLDEMTKEGIRPNVVTYNSIIDAF---GRSASAQCVVDDSGET-TALQVESLSSIVV 580
Query: 289 VMARAGQVAE----------------------------------AYQFLCQIPIQPTASM 314
A Q A+ +Q + ++ I+P
Sbjct: 581 QEAIESQAADKEDNRIIEIFGKLAAEKACEAKNSGKQEILCILGVFQKMHELKIKPNVVT 640
Query: 315 LGALLNGC 322
A+LN C
Sbjct: 641 FSAILNAC 648
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 129/271 (47%), Gaps = 17/271 (6%)
Query: 66 KVFDGIPVKNL----VSWNSMLDGYAKCGDISMARQVFDLMPE----QDVLSWSCLIDGY 117
++FDG+ + +++NS+L ++ G AR++F M + QD+ +++ L+D
Sbjct: 282 EIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAV 341
Query: 118 VRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
+ G D A + EM PN VT +++ A +G LD M + + + L
Sbjct: 342 CKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDR 401
Query: 178 VLRTSLVDMYAKCGAIQEALHVFR----SGLMKPSDVFIWNSMIGGFACHGLVKESLDLF 233
V +L+ +YAK G ++AL V + +G+ K DV +N+++ G+ E +F
Sbjct: 402 VSYNTLLSVYAKLGRFEQALDVCKEMENAGIRK--DVVTYNALLAGYGKQYRYDEVRRVF 459
Query: 234 SEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARA 293
EM V P+ +TY L+ + GGL KEA F + G+ Y+ ++D + +
Sbjct: 460 EEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKN 519
Query: 294 GQVAEAYQFLCQIP---IQPTASMLGALLNG 321
G V + L ++ I+P ++++
Sbjct: 520 GLVESSVTLLDEMTKEGIRPNVVTYNSIIDA 550
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 129/271 (47%), Gaps = 13/271 (4%)
Query: 120 KGDYDEALAVFE--EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
+GD +A+ FE R SG +++ LG ++ + + + T+
Sbjct: 166 RGDSAKAVRCFEFAVRRESGKNEQGKLASAMISTLGRLGKVELAKAVFDTALKEGYGKTV 225
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRS----GLMKPSDVFIWNSMIGGFACHGL-VKESLDL 232
++L+ Y + G EA+ VF S GLM ++ +N++I G+ K+ +++
Sbjct: 226 YAFSALISAYGRSGYCNEAIKVFDSMKSNGLM--PNLVTYNAVIDACGKGGVEFKKVVEI 283
Query: 233 FSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMAR 292
F M GV+PD IT+ +LL+ C+ GGL + A F + G+ Y ++D + +
Sbjct: 284 FDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCK 343
Query: 293 AGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDG-R 348
GQ+ A++ + ++P I P +++G G+LD A + ++ L D
Sbjct: 344 GGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVS 403
Query: 349 YVGLSNVYAIFRRWDKARSMREAMERMGVKK 379
Y L +VYA R+++A + + ME G++K
Sbjct: 404 YNTLLSVYAKLGRFEQALDVCKEMENAGIRK 434
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 114/228 (50%), Gaps = 9/228 (3%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRV 135
++M+ + G + +A+ VFD ++ V ++S LI Y R G +EA+ VF+ M+
Sbjct: 194 SAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKS 253
Query: 136 SGPKPNEVTMVSVLCACAHLGALDKGRMMHHY--VIDNELPLTLVLRTSLVDMYAKCGAI 193
+G PN VT +V+ AC G ++ +++ + ++ N + + SL+ + ++ G
Sbjct: 254 NGLMPNLVTYNAVIDACGK-GGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLW 312
Query: 194 QEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
+ A +F + + K D+F +N+++ G + + ++ SEM + P+ +TY +
Sbjct: 313 EAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTM 372
Query: 252 LSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
+ A G + +A F+ + G+ Y ++ V A+ G+ +A
Sbjct: 373 IDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQA 420
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 119/270 (44%), Gaps = 30/270 (11%)
Query: 4 VGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPN 63
+GV D +++ L A L + E L + + AG D N+L+ Y
Sbjct: 395 LGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDE 454
Query: 64 ARKVFD----GIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLID 115
R+VF+ G NL+++++++D Y+K G A +VF + DV+ +S LID
Sbjct: 455 VRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALID 514
Query: 116 GYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL 175
+ G + ++ + +EM G +PN VT S++ A + V+D+
Sbjct: 515 ALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSAS-------AQCVVDDSGET 567
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKES------ 229
T + SL + +QEA+ + + I+ + AC K S
Sbjct: 568 TALQVESLSSI-----VVQEAIESQAADKEDNRIIEIFGKLAAEKACEA--KNSGKQEIL 620
Query: 230 --LDLFSEMHIVGVKPDEITYLNLLSACAH 257
L +F +MH + +KP+ +T+ +L+AC+
Sbjct: 621 CILGVFQKMHELKIKPNVVTFSAILNACSR 650
>29235.m000239 pentatricopeptide repeat-containing protein, putative
Length = 676
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 161/344 (46%), Gaps = 17/344 (4%)
Query: 59 RDIPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQD----VLSW 110
D+ +A VF+ +P K N VS+ +++ G + G + +F M E D V ++
Sbjct: 18 NDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTY 77
Query: 111 SCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID 170
+ ++ G EA+ +F EMR G +PN T ++ A L++GR + +++
Sbjct: 78 TVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVE 137
Query: 171 NELPLTLVLRTSLVDMYAKCG---AIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
L ++ +L+D Y K G A QE L + S P++ +N +I GF V
Sbjct: 138 KGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNE-RTYNELICGFCRKKNVH 196
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMV 287
++ L S+M + P +TY +L+ G + A+ + + +NG+ P Y+ +
Sbjct: 197 RAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFI 256
Query: 288 DVMARAGQVAEA---YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAET-VGRKLIELEP 343
D + + G++ EA + L + I+ + AL++G GK+D A + + R L E
Sbjct: 257 DTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCL 316
Query: 344 HQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKS-PGYSFV 386
Y L + R+ +A + E+M + G+K + P Y+ +
Sbjct: 317 PNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTIL 360
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 123/285 (43%), Gaps = 47/285 (16%)
Query: 49 NSLIHMYSSFRDIPNA----RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPE 104
N LI + +++ A K+ + ++V++NS++ G K G + A ++ +LM E
Sbjct: 183 NELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNE 242
Query: 105 QDVL----SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK 160
V+ ++S ID +KG +EA +F ++ G K NEV +++ G +D
Sbjct: 243 NGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDD 302
Query: 161 GR-MMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK------PS----- 208
++ + ++ LP + +L+D K +QEAL + S + K P+
Sbjct: 303 ANSLLDRMLTEDCLPNSSTY-NALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILI 361
Query: 209 --------------------------DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
DV+I+ + I F G +KE+ D+ S M GV
Sbjct: 362 VAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVM 421
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMV 287
PD +TY ++ A GL+ A+ + G P Y+C++
Sbjct: 422 PDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLI 466
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 133/338 (39%), Gaps = 45/338 (13%)
Query: 7 FPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARK 66
+P T+ + A +R + + + + G E + +I+ + R+
Sbjct: 71 YPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRR 130
Query: 67 VFDGIPVKNLV----SWNSMLDGYAKCGDISMARQVFDLMPEQDV----LSWSCLIDGYV 118
+ D + K LV ++N+++DGY K G + A+++ DLM +++ LI G+
Sbjct: 131 ILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFC 190
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALD------------------- 159
RK + A+A+ +M S P+ VT S++ +G LD
Sbjct: 191 RKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQW 250
Query: 160 -----------KGRMMHHYVIDNELP-----LTLVLRTSLVDMYAKCGAIQEALHVFRSG 203
KGR+ V+ N L V+ T+L+D Y K G + +A +
Sbjct: 251 TYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRM 310
Query: 204 LMKPS--DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
L + + +N++I G V+E+L L M G+K TY L+ A G
Sbjct: 311 LTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDF 370
Query: 262 KEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
A D + +G P Y + G + EA
Sbjct: 371 DYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEA 408