Jatropha Genome Database
- JcCA0044231.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0044231.10 + phase: 2 /partial
(171 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30221.m002218 mads box protein, putative 255 8e-69
30174.m008936 mads box protein, putative 56 9e-09
29596.m000699 mads box protein, putative 55 1e-08
30174.m009079 mads box protein, putative 55 2e-08
29648.m001978 mads box protein, putative 54 3e-08
30147.m014133 mads box protein, putative 54 5e-08
29804.m001536 mads box protein, putative 51 2e-07
30138.m003939 mads box protein, putative 50 4e-07
30174.m009080 mads box protein, putative 50 4e-07
30174.m008934 mads box protein, putative 50 6e-07
28333.m000571 mads box protein, putative 49 1e-06
30190.m011098 mads box protein, putative 48 2e-06
29790.m000814 mads box protein, putative 48 2e-06
30170.m013818 mads box protein, putative 47 3e-06
29929.m004629 mads box protein, putative 47 3e-06
29782.m000119 Floral homeotic protein DEFICIENS, putative 47 4e-06
>30221.m002218 mads box protein, putative
Length = 233
Score = 255 bits (651), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 134/170 (78%), Positives = 151/170 (88%), Gaps = 1/170 (0%)
Query: 1 MKQIIERYQKLRGNSIPEHDSLREHLYGELAMLRKETCRLQLNLQLYRGEDMSSISFEDL 60
M+QIIERYQK+ G IPEHDS RE L+GELAMLRKET RLQLN++ Y GEDMSSI FE+L
Sbjct: 64 MEQIIERYQKITGTCIPEHDS-REQLFGELAMLRKETRRLQLNMRRYTGEDMSSIPFEEL 122
Query: 61 GELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNIYRWIQDQRVAMEYHQVT 120
GELEQ+LE SVAK+R+RKNELLQQQLDNLR+KERMLEEENGN+YRWIQ+ R A+EY Q T
Sbjct: 123 GELEQELERSVAKVRDRKNELLQQQLDNLRRKERMLEEENGNMYRWIQEHRAALEYQQAT 182
Query: 121 IEAKPAEHQQVLEQFPFCGEPSSLLQLAIIPSQIQSYHLQLAQPNLQGSG 170
+EAKP EHQQVL+QFPFCGEP+S+LQLA IPSQI YHLQLAQPNLQGS
Sbjct: 183 MEAKPVEHQQVLDQFPFCGEPNSVLQLATIPSQIHPYHLQLAQPNLQGSS 232
>30174.m008936 mads box protein, putative
Length = 157
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 1 MKQIIERYQKL----RGNSIPEHDSLREHLYGELAMLRKETCRLQLNLQLYRGEDMSSIS 56
M+ IERY++ + N P ++++ L E L K+ L+++ + G+ + S +
Sbjct: 1 MQDTIERYRRHVKEHQTNKKPTDENMQHQLKSEAGNLMKKIELLEVSKRKLLGQGLGSCN 60
Query: 57 FEDLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNI 103
E+L ++EQ+LE SV+ IR RKN++ ++Q++ L++KE+ L EN +
Sbjct: 61 LEELQQIEQQLEKSVSSIRARKNQVFKEQIEQLKEKEKQLAAENARL 107
>29596.m000699 mads box protein, putative
Length = 262
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 65/113 (57%), Gaps = 10/113 (8%)
Query: 1 MKQIIERYQKLR------GNSIPEHDSLREHLYGELAMLRKETCRLQLNLQLYRGEDMSS 54
MK IIERY K + GN I E + E AMLR++ LQ N + GE++S
Sbjct: 62 MKSIIERYNKSKEENNQTGNPISEVKFWQR----EAAMLRQQLQNLQENHRQMMGEELSG 117
Query: 55 ISFEDLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNIYRWI 107
+S ++L LE +LE S+ +R +K++LL +++ L +K ++ +EN +Y+ +
Sbjct: 118 LSIKELQNLEGRLEMSLRGVRMKKDQLLMDEIEELNRKGNLIHQENVELYKKV 170
>30174.m009079 mads box protein, putative
Length = 180
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 72/117 (61%), Gaps = 3/117 (2%)
Query: 1 MKQIIERYQKLRGNS---IPEHDSLREHLYGELAMLRKETCRLQLNLQLYRGEDMSSISF 57
M++I+ERY++ + + +E+ E L+ + LQ N + Y GED+ S++
Sbjct: 1 MERILERYERYSYAERQLVATDLNSQENWTLEYNRLKAKVELLQRNHRHYLGEDLDSLTL 60
Query: 58 EDLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNIYRWIQDQRVAM 114
++L LEQ+L++++ IR RKN+L+ + + L+KKE+ ++E+N + + I+++ A+
Sbjct: 61 KELQNLEQQLDTALKHIRTRKNQLMFESISELQKKEKAIQEQNNMLSKQIKEKEKAV 117
>29648.m001978 mads box protein, putative
Length = 234
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 49/190 (25%)
Query: 4 IIERYQKLRGNSIPEHDSLREHLYGELAMLRKETCRLQLNLQLYRGEDMSSISFEDLGEL 63
++++Y KL G + D+ E+L E+ ++KE +Q+ L+ GED+SS+ + +L L
Sbjct: 67 MLDKYHKLSGQRL--WDAKHENLSNEIDRVKKENDNMQIELRHLNGEDISSLKYPELQAL 124
Query: 64 EQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNI--------------YRWIQD 109
E LE+ +A IRN++ E + +++K++ L +EN ++ R +++
Sbjct: 125 EDALETGLAGIRNKQMEYYKM----MKRKDKSLADENQHLSFILHQLEMETKQTVREMEN 180
Query: 110 QRVAMEYHQVTIEAK--------PAEHQQVLE---QFPFCGEPSSLLQLAIIPSQIQSYH 158
+ HQ+ +E K P Q+V + Q PF ++
Sbjct: 181 PYLVSSQHQLQMETKQNMREMENPYHQQRVRDYNSQVPF------------------AFR 222
Query: 159 LQLAQPNLQG 168
+Q QPNLQG
Sbjct: 223 VQPIQPNLQG 232
>30147.m014133 mads box protein, putative
Length = 213
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 1 MKQIIERYQK-----LRGNSIPEHDSLREHLYGELAMLRKETCRLQLNLQLYRGEDMSSI 55
M++ IERY+K S+ + ++E L E A L K+ L+++ + G+ +SS
Sbjct: 62 MQKTIERYRKHAKEVQAAGSVAKEQHVQE-LTEESAALVKKIEELEISQRKLLGQGLSSC 120
Query: 56 SFEDLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEEN 100
S E+L E+ +LE S++ IR+RK +L ++Q++ L+ KER+L EEN
Sbjct: 121 SIEELQEIHSQLERSLSNIRSRKVQLFKEQMEQLKAKERLLLEEN 165
>29804.m001536 mads box protein, putative
Length = 266
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 11/167 (6%)
Query: 1 MKQIIERYQKLRGNSIPEHDSLREHLYG--ELAMLRKETCRLQLNLQLYRGEDMSSISFE 58
M +IERY KL+ + E + E A LRKE LQ + + GE++S +S +
Sbjct: 89 MNSVIERYNKLKEEQQQLMNPASEIKFWQREAASLRKELQYLQESHRQLMGEELSGLSAK 148
Query: 59 DLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNIYRWIQDQRVAMEYHQ 118
DL LE +LE S+ +R +K+++L ++ L +K + EEN +++ +V + Y +
Sbjct: 149 DLQNLENQLEMSLKGVRMKKDQILTDEIRELNRKGNLTYEENLKLHK-----KVELIYQE 203
Query: 119 -VTIEAKPAEHQQVLEQFPFCGEPSSLLQLAIIPSQIQSYHLQLAQP 164
V + K E + V E P +L I + I HLQL+QP
Sbjct: 204 NVELRKKVNEERDVREANKSSHPPYTLSNGYDIHAPI---HLQLSQP 247
>30138.m003939 mads box protein, putative
Length = 244
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 51/75 (68%)
Query: 29 ELAMLRKETCRLQLNLQLYRGEDMSSISFEDLGELEQKLESSVAKIRNRKNELLQQQLDN 88
E A L+ LQ N + + GE++ +++ +DL LEQ+++S++ +R+RKN+L+ + +
Sbjct: 94 EHAKLKARVEVLQRNQRHFMGEELDTLTLKDLQNLEQQIDSALKHVRSRKNQLMYESISE 153
Query: 89 LRKKERMLEEENGNI 103
L+KK++ L+E+N +
Sbjct: 154 LQKKDKALQEQNNQL 168
>30174.m009080 mads box protein, putative
Length = 198
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
Query: 1 MKQIIERYQKLRGNSIPEHDSLRE--HLYGELAMLRKETCRLQLNLQLYRGEDMSSISFE 58
M + IE+YQ+ ++ + S+ + + Y E L+ LQ + + + GED+ ++ +
Sbjct: 22 MAKTIEKYQRCSYGALEANQSVHDTQNSYQEYLKLKSRVEALQRSQRHFLGEDLGNLGTK 81
Query: 59 DLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNIYRWIQDQRVAME 115
DL +LE +L+SS+ +R K+ + QL L++KE ML + N + + +++ A++
Sbjct: 82 DLEQLEHQLDSSLKHVRLTKSNFMLDQLSQLQRKEEMLLQTNNALRKKLEETNAALQ 138
>30174.m008934 mads box protein, putative
Length = 244
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 61/101 (60%), Gaps = 5/101 (4%)
Query: 3 QIIERYQKLRGNSIPEHDSL---REHLYGELAMLRKETCRLQLNLQLYRGEDMSSISFED 59
+ +ERYQ R P+ +S+ ++ Y E+ L+ + LQ + GED+ +S ++
Sbjct: 64 KTLERYQ--RCCFTPQDNSIERETQNWYQEVTKLKAKYESLQRTQRHLLGEDLGPLSVKE 121
Query: 60 LGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEEN 100
L LE++LE ++A R RK +++ +Q+++LRKKER L + N
Sbjct: 122 LQNLEKQLEGALALARQRKTQIMIEQMEDLRKKERHLGDLN 162
>28333.m000571 mads box protein, putative
Length = 173
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 10/113 (8%)
Query: 1 MKQIIERYQKLRGNSIPEHDSL------REHLYGELAMLRKETCRLQLNLQLYRGEDMSS 54
MK IIERY K + EH L + E A+LR++ LQ + + + GE +
Sbjct: 1 MKSIIERYNKTK----EEHQQLLNPTSEVKFWQREAAVLRQQLHNLQESHRQFMGEQLYG 56
Query: 55 ISFEDLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNIYRWI 107
+S +DL LE +LE S+ IR +K ++L ++ L +K ++ +EN +Y+ +
Sbjct: 57 LSVKDLQSLENQLEMSLRGIRTKKEQILTDEIQELSRKGNLIHQENVELYKKV 109
>30190.m011098 mads box protein, putative
Length = 154
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 63/107 (58%), Gaps = 4/107 (3%)
Query: 3 QIIERYQKLR---GNSIPE-HDSLREHLYGELAMLRKETCRLQLNLQLYRGEDMSSISFE 58
+ IERYQK G SI + +H+ + L K+ L+++ + G+ + S +
Sbjct: 7 KTIERYQKKAKDLGISIKTVQECTSQHMKEDTFSLAKKIELLEVSKRKLLGDGLEPCSVD 66
Query: 59 DLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNIYR 105
+L +LE +LE S+ +IR RKN+L ++++ LR++E++L EEN + +
Sbjct: 67 ELQQLENQLERSLTRIRTRKNQLFGEKIEKLREEEKILMEENTKLRK 113
>29790.m000814 mads box protein, putative
Length = 188
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 1 MKQIIERYQKLRG---NSIPEHDSLREHLYG-ELAMLRKETCRLQLNLQLYRGEDMSSIS 56
M+ I++RY++ ++P +DS ++ + E L L+ +L+ + G+D+ +S
Sbjct: 1 MEAILDRYERCASAEKQAVP-NDSEKQGTWCLEYPKLVARIEILERSLRNFAGKDLGPMS 59
Query: 57 FEDLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENG 101
+L LEQ++++++ ++R+RKN+L + L L+K ER L E+N
Sbjct: 60 LRELQHLEQQIDTALKRVRSRKNQLYHESLAALQKNERSLHEQNN 104
>30170.m013818 mads box protein, putative
Length = 287
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 65/105 (61%), Gaps = 7/105 (6%)
Query: 1 MKQIIERYQKL-----RGNSIPEHDSLREHLYGELAMLRKETCRLQLNLQLYRGEDMSSI 55
+K IERY+K +SI E ++ ++ E A LR++ LQ + + G+ +SS+
Sbjct: 107 IKSTIERYKKACSDSSNTSSITEINA--QYYQQESAKLRQQIQMLQNSNRHLMGDSLSSL 164
Query: 56 SFEDLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEEN 100
+ ++L +LE +LE + +IR++K+ELL +++ L+K+E LE E+
Sbjct: 165 TVKELKQLENRLERGITRIRSKKHELLLAEIEYLQKREIELENES 209
>29929.m004629 mads box protein, putative
Length = 182
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 15/133 (11%)
Query: 1 MKQIIERYQKLRGNSIPEHDSLREHL-------YGELAMLRKETCRLQLNLQLYRGEDMS 53
M + +ERYQK + + S RE L Y +L + R Q NL GED+
Sbjct: 4 MLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNL---LGEDLG 60
Query: 54 SISFEDLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNIYRWIQDQRVA 113
+S +DL LE++L+ S+ +IR+ + + + QL +L++KE ML E N + QR+
Sbjct: 61 PLSSKDLESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHMLNEANKTL-----KQRLV 115
Query: 114 MEYHQVTIEAKPA 126
Y ++ P+
Sbjct: 116 EGYQVNAMQLNPS 128
>29782.m000119 Floral homeotic protein DEFICIENS, putative
Length = 235
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Query: 2 KQIIERYQKLRGNS--IPEHDSLREHLYGELAMLRKETCRLQLNLQLYRGEDMSSISFED 59
K+I ++YQK G I ++ +++HL L +L+ +++ GED++ +SF++
Sbjct: 66 KKIFDQYQKTLGIDLWITHYERMQDHL----KKLNDINNKLRRDIRQRMGEDLNDLSFDE 121
Query: 60 LGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEE 98
L LEQ++ ++ IR RK ++ Q + RKKER L E
Sbjct: 122 LRGLEQRMAPALHMIRERKYHFIETQTNTKRKKERNLVE 160