Jatropha Genome Database

JcCA0044211.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0044211.20 - phase: 0 /pseudo/partial
         (99 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29841.m002903 glycerol kinase, putative                               108   7e-25

>29841.m002903 glycerol kinase, putative
          Length = 521

 Score =  108 bits (269), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 52/83 (62%), Positives = 63/83 (75%)

Query: 17  LQADLLGNAVVRPADIETTXXXXXXXXXXXIGVWKEEEIFATGEKVKTATTFHPNLHEQQ 76
           +QADL+G+ VVRP+DIETT           +G+W E+EIFA+GEK KT T F P L E+ 
Sbjct: 439 IQADLVGHPVVRPSDIETTALGAAYAAGLAVGIWTEKEIFASGEKAKTDTIFCPKLDEEL 498

Query: 77  RKKKVESWCKAVEKSFGLADLSI 99
           RKKKVESWCKAVE++FGLADLSI
Sbjct: 499 RKKKVESWCKAVERTFGLADLSI 521