Jatropha Genome Database

JcCA0043871.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0043871.10 - phase: 0 
         (218 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30190.m011164 protein binding protein, putative                       256   7e-69
30136.m001022 ank repeat-containingprotein, putative                  191   2e-49
30169.m006408 ank repeat-containingprotein, putative                  176   8e-45
29840.m000619 hypothetical protein                                    172   8e-44
29904.m002945 ank repeat-containingprotein, putative                  101   3e-22
29904.m002944 ank repeat-containingprotein, putative                   97   5e-21
29907.m000650 ank repeat-containingprotein, putative                   84   3e-17
29739.m003767 hypothetical protein                                     64   6e-11

>30190.m011164 protein binding protein, putative
          Length = 325

 Score =  256 bits (653), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 128/204 (62%), Positives = 152/204 (74%), Gaps = 1/204 (0%)

Query: 15  QEVESIVDPLSKEYTNIDGDNANKIFFKTHQQLVIDGEKWMKETATSCTVVGALIITIMF 74
           +EVESIV PLSKE+ N        IF ++H +LV DGEKWMKETATSC+VVGALIITIMF
Sbjct: 123 KEVESIVSPLSKEHLNRFDQRPGDIFSESHLKLVADGEKWMKETATSCSVVGALIITIMF 182

Query: 75  SAAFAVTVGSNDQETGVPIFSQRXXXXXXXXXXXXXXXXXXTSVLMFLGVLTSRYSEVDF 134
           +AAF V  G NDQE+G P+F  +                  TSVL FLGVLTSRY+E DF
Sbjct: 183 TAAFTVP-GGNDQESGFPLFLHKKTFIIFIISDAISLFASSTSVLTFLGVLTSRYAEEDF 241

Query: 135 LKSLPTKLIIGLSALFLSIATMMAAFCSILMIVLKGELNLVLPITLLASIPVILFIFLQF 194
           LKSLPTKLII LS LF+SIA MM AFCS L+I+L+G+LNL++P+ LLASIPV LF+  QF
Sbjct: 242 LKSLPTKLIIALSTLFVSIAAMMVAFCSTLIIMLRGQLNLIMPLVLLASIPVTLFVLQQF 301

Query: 195 PLLVEIFVSTYGLGVFNRKMKYWY 218
           PLLV+IF STYG G+F+RK+K WY
Sbjct: 302 PLLVDIFASTYGPGIFDRKLKNWY 325


>30136.m001022 ank repeat-containingprotein, putative
          Length = 580

 Score =  191 bits (486), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 109/203 (53%), Positives = 131/203 (64%), Gaps = 3/203 (1%)

Query: 15  QEVESIVDPLSKEYTNIDGDNANKIFFKTHQQLVIDGEKWMKETATSCTVVGALIITIMF 74
           +EVESIV P  KE  N        +F ++H++LV +GEKWMK+TATS TVV ALI TIMF
Sbjct: 377 KEVESIVQPKYKEMVNFQRKTPRALFTESHKKLVEEGEKWMKDTATSSTVVAALIATIMF 436

Query: 75  SAAFAVTVGSNDQETGVPIFSQRXXXXXXXXXXXXXXXXXXTSVLMFLGVLTSRYSEVDF 134
           SA F V  G  DQ  G P++                     +S+LMFLG+LT+RY E DF
Sbjct: 437 SAIFTVP-GGYDQ-YGKPLYLYEGVFMVFMVADAMSLFASTSSILMFLGILTARYREEDF 494

Query: 135 LKSLPTKLIIGLSALFLSIATMMAAFCSILMIVLKGELNLVL-PITLLASIPVILFIFLQ 193
           LKSLPTKLI+GLS LF SIATMM  F   L   L+  ++ VL PI LLAS+PV LF  LQ
Sbjct: 495 LKSLPTKLIVGLSTLFFSIATMMITFGVALFTFLRERVSWVLFPIILLASLPVTLFALLQ 554

Query: 194 FPLLVEIFVSTYGLGVFNRKMKY 216
           FPLLVEIF STYGLG+F +  K+
Sbjct: 555 FPLLVEIFFSTYGLGIFEKSRKW 577


>30169.m006408 ank repeat-containingprotein, putative
          Length = 590

 Score =  176 bits (446), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 92/200 (46%), Positives = 125/200 (62%), Gaps = 2/200 (1%)

Query: 15  QEVESIVDPLSKEYTNIDGDNANKIFFKTHQQLVIDGEKWMKETATSCTVVGALIITIMF 74
           +EVE ++ P  KE  + +G    ++F + H+ LV  GEKWMK+TATSC  V AL+IT++F
Sbjct: 386 KEVEKVIQPSYKELKDKNGRTPRQVFTEGHKSLVEQGEKWMKDTATSCATVAALVITVVF 445

Query: 75  SAAFAVTVGSNDQETGVPIFSQRXXXXXXXXXXXXXXXXXXTSVLMFLGVLTSRYSEVDF 134
           +AAF V  G N+ + G+PI+                     TS+LMFLG+LTSRYSE DF
Sbjct: 446 AAAFTVP-GGNNSDQGIPIYLNETAFVIFAISDALGLFSSSTSLLMFLGILTSRYSEGDF 504

Query: 135 LKSLPTKLIIGLSALFLSIATMMAAFCSILMIVLKGELN-LVLPITLLASIPVILFIFLQ 193
           LK+LP +L IGL  LF SIA+M+AAF +   +VL   +  + +PI L+A  PV LF  LQ
Sbjct: 505 LKALPMRLSIGLITLFFSIASMLAAFSAAFHLVLFHRVKWIAVPIGLVACAPVTLFALLQ 564

Query: 194 FPLLVEIFVSTYGLGVFNRK 213
           FPLL E+  ST+G  VF + 
Sbjct: 565 FPLLSEMISSTFGRSVFRKH 584


>29840.m000619 hypothetical protein
          Length = 233

 Score =  172 bits (437), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 96/196 (48%), Positives = 122/196 (62%), Gaps = 2/196 (1%)

Query: 11  LLSMQEVESIVDPLSKEYTNIDGDNANKIFFKTHQQLVIDGEKWMKETATSCTVVGALII 70
           LL  +EVE IV PL  E  N DG     +F   H++L  +GEKWMKETA+SC +V  LI 
Sbjct: 28  LLWFKEVEKIVQPLYTEMKNFDGQTPECLFSIEHKKLKREGEKWMKETASSCMLVATLIA 87

Query: 71  TIMFSAAFAVTVGSNDQETGVPIFSQRXXXXXXXXXXXXXXXXXXTSVLMFLGVLTSRYS 130
           T+MF+AAF V  G+N+  +G PIF                     TS+L+FL +LTSRY+
Sbjct: 88  TVMFAAAFTVPGGTNEN-SGRPIFLHTRSFMAFVISDALALFSSATSILIFLSILTSRYA 146

Query: 131 EVDFLKSLPTKLIIGLSALFLSIATMMAAFCSILMIVLKGELN-LVLPITLLASIPVILF 189
           E DFL SLP KLI+GL+ LF+SI TMM AF + L +VL+  L    LPI ++A IPV LF
Sbjct: 147 EEDFLHSLPNKLIMGLATLFISITTMMVAFTATLFLVLRHGLEWTTLPIIIVACIPVSLF 206

Query: 190 IFLQFPLLVEIFVSTY 205
             LQFPL+V+I   TY
Sbjct: 207 ASLQFPLVVDIVSHTY 222


>29904.m002945 ank repeat-containingprotein, putative
          Length = 712

 Score =  101 bits (251), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 92/174 (52%), Gaps = 2/174 (1%)

Query: 30  NIDGDNANKIFFKTHQQLVIDGEKWMKETATSCTVVGALIITIMFSAAFAVTVGSNDQET 89
           N  G N ++IF  TH++LV  G +W+ +T+ SC+VV ALI T+ F+++ A   G  D+  
Sbjct: 537 NKKGKNPDEIFTNTHKKLVKSGSQWLVKTSESCSVVAALIATVAFASS-ATVPGGYDERK 595

Query: 90  GVPIFSQRXXXXXXXXXXXXXXXXXXTSVLMFLGVLTSRYSEVDFLKSLPTKLIIGLSAL 149
           G+P                       T+++ FL + TS + E DF   LP KL +GL++L
Sbjct: 596 GIPNLVGLSAFNVFAISSLLALCFSLTALVYFLAIRTSGFKEHDFAVDLPKKLFVGLASL 655

Query: 150 FLSIATMMAAFCSILMIVLKGEL-NLVLPITLLASIPVILFIFLQFPLLVEIFV 202
           F S+A+++ +FCS   + +  +L +L LPI     + VI+    Q P    + V
Sbjct: 656 FASMASILVSFCSSHSLTVGAKLKSLALPIYTFTGLTVIILAVFQLPFYFNLLV 709


>29904.m002944 ank repeat-containingprotein, putative
          Length = 786

 Score = 97.1 bits (240), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 60/172 (34%), Positives = 89/172 (51%), Gaps = 2/172 (1%)

Query: 30  NIDGDNANKIFFKTHQQLVIDGEKWMKETATSCTVVGALIITIMFSAAFAVTVGSNDQET 89
           N  G    +IF  TH++LV  G +W+ +T+ SC+VV AL+ T+ F+ +  +  G N  E 
Sbjct: 598 NSQGQTPKEIFIVTHKELVAKGSEWLTKTSESCSVVAALVATVAFATSATIPGGVN-PEN 656

Query: 90  GVPIFSQRXXXXXXXXXXXXXXXXXXTSVLMFLGVLTSRYSEVDFLKSLPTKLIIGLSAL 149
           G PI                      T+V+ FL +LTSRY E DF   LP KL +GL++L
Sbjct: 657 GAPILENEPAFEVFAIASLVALCFSVTAVIFFLTILTSRYQENDFAMDLPRKLFLGLTSL 716

Query: 150 FLSIATMMAAFCSILMIVLKGEL-NLVLPITLLASIPVILFIFLQFPLLVEI 200
           F SIA+++ +FC+    VLK  L     P+     +P+  F   Q PL  ++
Sbjct: 717 FTSIASILLSFCAGHFFVLKESLRTAAYPLYAATCLPISFFALSQLPLYFDL 768


>29907.m000650 ank repeat-containingprotein, putative
          Length = 317

 Score = 84.3 bits (207), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 72/134 (53%), Gaps = 2/134 (1%)

Query: 28  YTNIDGDNANKIFFKTHQQLVIDGEKWMKETATSCTVVGALIITIMFSAAFAVTVGSNDQ 87
           + N  G  A ++F +TH +L  D ++W+K T+ SC+V+  LI T+ F+A + V  G ND 
Sbjct: 172 HHNGYGQTALELFEETHSKLHKDAQEWLKRTSESCSVIAVLIATVAFTAIYTVP-GGNDD 230

Query: 88  ETGVPIFSQRXXXXXXXXXXXXXXXXXXTSVLMFLGVLTSRYSEVDFLKSLPTKLIIGLS 147
           +TG+P+  +                   TSV+MFL +LTS +   DF  SLP KL +G +
Sbjct: 231 KTGLPVLLRYPFFSVFTILDIISLASSLTSVVMFLSILTSPFQLQDFRISLPRKLTLGFT 290

Query: 148 ALFLSIATMMAAFC 161
            LF S  +  A  C
Sbjct: 291 FLFFS-GSYHACIC 303


>29739.m003767 hypothetical protein
          Length = 116

 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)

Query: 42 KTHQQLVIDGEKWMKETATSCTVVGALIITIMFSAAFAVTVGSNDQETGVPIFSQR 97
          + H++LV +GEKWMK+ A+SCTV  ALI T++F+AA     G N  E G P FS++
Sbjct: 2  EEHKELVKEGEKWMKDKASSCTVAAALIATVVFAAAITAP-GGNKNEDGYPNFSKQ 56