Jatropha Genome Database

JcCA0043771.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0043771.10 + phase: 0 
         (334 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29683.m000479 Rop guanine nucleotide exchange factor, putative        475   e-134
30170.m014310 Rop guanine nucleotide exchange factor, putative        362   e-100
28934.m000056 Rop guanine nucleotide exchange factor, putative        321   3e-88
30174.m008604 Rop guanine nucleotide exchange factor, putative        277   4e-75
30143.m001222 Rop guanine nucleotide exchange factor, putative        268   3e-72
30146.m003571 conserved hypothetical protein                          268   3e-72
29912.m005503 conserved hypothetical protein                          233   1e-61
29827.m002639 Rop guanine nucleotide exchange factor, putative        225   2e-59

>29683.m000479 Rop guanine nucleotide exchange factor, putative
          Length = 580

 Score =  475 bits (1223), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 243/300 (81%), Positives = 260/300 (86%), Gaps = 6/300 (2%)

Query: 15  ERCGSYSLSADVXXXXXXXXXXXXXXDG--GEGASSSITSSPRPPGKSSFSFQGPLMLPV 72
           ERCGSYSLSADV               G  GEGAS+SITSSP  P  + F FQ PL+LP 
Sbjct: 23  ERCGSYSLSADVSESESSTSSSFWCRRGFDGEGASTSITSSPPLPSSAKFCFQTPLLLPK 82

Query: 73  IGGKDFMICDVKPEKRETDLSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLS 132
                 ++ D+KPEKR+TDLSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLS
Sbjct: 83  D----LLLWDIKPEKRDTDLSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLS 138

Query: 133 ATVFGELWRLEPLAPQKKSMWRREMEWLLSVSDSIVELVPSIQQFPGGGTYEVMVPRPRS 192
           ATVFGELWRLEPLAPQKKSMWRREMEWLL VSDSIVELVPS+QQFPGGGTYE+M  +PRS
Sbjct: 139 ATVFGELWRLEPLAPQKKSMWRREMEWLLCVSDSIVELVPSVQQFPGGGTYEIMAAQPRS 198

Query: 193 DLYMNLPALKKLDAMLISMLDGFCDTEFWYVDRGIILADGGDCDVYPSSIASARPSIRQE 252
           DLY+NLPALKKLDAMLISMLDGFC+TEFWYVDRGIILADG D DVYPS  ++ RPSIRQE
Sbjct: 199 DLYVNLPALKKLDAMLISMLDGFCETEFWYVDRGIILADGADNDVYPSGFSTGRPSIRQE 258

Query: 253 EKWWLPCPRVPSNGLSEDARKRLQQCRDCTNQILKAAMAINSSVLAEMEIPSAYLETLPK 312
           EKWWLPCP++PSNGLSEDARKRLQQCRDCTNQILKAAMAINSSVLAEMEIP+AYLETLPK
Sbjct: 259 EKWWLPCPKLPSNGLSEDARKRLQQCRDCTNQILKAAMAINSSVLAEMEIPTAYLETLPK 318


>30170.m014310 Rop guanine nucleotide exchange factor, putative
          Length = 523

 Score =  362 bits (928), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 181/239 (75%), Positives = 206/239 (86%), Gaps = 6/239 (2%)

Query: 67  PLMLPVIGGKDFMICDVKPEKRETDLSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISN 126
           P+MLPV+ GK  M+      K E +LS+VEMMKERFAKLLLGEDMSGGGKGVCTALAISN
Sbjct: 65  PIMLPVVPGKHVMM------KMEENLSDVEMMKERFAKLLLGEDMSGGGKGVCTALAISN 118

Query: 127 AITNLSATVFGELWRLEPLAPQKKSMWRREMEWLLSVSDSIVELVPSIQQFPGGGTYEVM 186
           AITNLSA+VFGEL +LEPLAPQKKSMW REM+ LL VSDSIVELVPS+Q  PGGGT+EVM
Sbjct: 119 AITNLSASVFGELRKLEPLAPQKKSMWHREMDLLLCVSDSIVELVPSMQNLPGGGTFEVM 178

Query: 187 VPRPRSDLYMNLPALKKLDAMLISMLDGFCDTEFWYVDRGIILADGGDCDVYPSSIASAR 246
           VPRPR DL+MNLPALKKL+ ML+S+LDGFCD EF+YVDRG+I+A G + + +  S +SAR
Sbjct: 179 VPRPRLDLFMNLPALKKLETMLLSILDGFCDAEFYYVDRGVIVAGGNETETFSLSSSSAR 238

Query: 247 PSIRQEEKWWLPCPRVPSNGLSEDARKRLQQCRDCTNQILKAAMAINSSVLAEMEIPSA 305
           PSI +EEKWWLP P+VP NGLSEDARKRLQQC++CTNQILK AMAIN SVL EMEIPSA
Sbjct: 239 PSISREEKWWLPFPKVPQNGLSEDARKRLQQCKECTNQILKVAMAINGSVLTEMEIPSA 297


>28934.m000056 Rop guanine nucleotide exchange factor, putative
          Length = 673

 Score =  321 bits (823), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 158/246 (64%), Positives = 186/246 (75%), Gaps = 6/246 (2%)

Query: 75  GKDFMICDVKPEKRETDLSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSAT 134
           GK   + D K EK+ + +SE+EMMKERF+KLLLGEDMSG G GVCTALAISNAITNL AT
Sbjct: 194 GKKLHLVDRKLEKQASSISEIEMMKERFSKLLLGEDMSGCGNGVCTALAISNAITNLCAT 253

Query: 135 VFGELWRLEPLAPQKKSMWRREMEWLLSVSDSIVELVPSIQQFPGGGTYEVMVPRPRSDL 194
           +FG+LWRLEPL P+KK+MWRREMEW L VSD IVEL+PS Q FP G   EVM  RPRSDL
Sbjct: 254 LFGQLWRLEPLPPEKKAMWRREMEWFLCVSDHIVELIPSWQTFPDGSKLEVMTCRPRSDL 313

Query: 195 YMNLPALKKLDAMLISMLDGFCDTEFWYVDRGIILADGGDCDVYPSSIASARPSIRQEEK 254
           Y+NLPAL+KLD ML+ +LD F +TEFWYVD+GI+ ++      +  ++       RQEEK
Sbjct: 314 YVNLPALRKLDNMLLEILDSFDNTEFWYVDQGILASEADGSSSFRRALQ------RQEEK 367

Query: 255 WWLPCPRVPSNGLSEDARKRLQQCRDCTNQILKAAMAINSSVLAEMEIPSAYLETLPKVW 314
           WWLP PRVP  GL E++RK LQ  RDCTNQ+LKAAMAINS  LA+ME+P  YLE LPK  
Sbjct: 368 WWLPVPRVPPCGLHENSRKELQHKRDCTNQMLKAAMAINSITLADMEVPETYLEGLPKNG 427

Query: 315 FLSLFD 320
             SL D
Sbjct: 428 KASLGD 433


>30174.m008604 Rop guanine nucleotide exchange factor, putative
          Length = 471

 Score =  277 bits (709), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 143/249 (57%), Positives = 177/249 (71%), Gaps = 9/249 (3%)

Query: 86  EKRETDLSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPL 145
           + +ET  SE+EMMKERF+KLLLGEDMSG GKGVCTA+ ISNAITNL ATVFG+  RLEPL
Sbjct: 94  DDQETVDSELEMMKERFSKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQTLRLEPL 153

Query: 146 APQKKSMWRREMEWLLSVSDSIVELVPSI-QQFPGGGTYEVMVPRPRSDLYMNLPALKKL 204
            P+KK+MW+REM+ LLSV D I+E  P+  Q    G   EVM  RPRSD+Y+NLPAL+KL
Sbjct: 154 QPEKKAMWKREMDCLLSVCDYILEFFPAKSQNLKDGTALEVMESRPRSDIYINLPALRKL 213

Query: 205 DAMLISMLDGFCDTEFWYVDRGIILADGGDCDVYPSSIASARPSIRQEEKWWLPCPRVPS 264
           DA+LI +LD F D EFWY ++G + ++      +   I       R+EEKWW+P P VP 
Sbjct: 214 DALLIEILDSFQDNEFWYAEQGSMSSNSTRSGSFRRVIVQ-----RKEEKWWVPVPCVPP 268

Query: 265 NGLSEDARKRLQQCRDCTNQILKAAMAINSSVLAEMEIPSAYLETLPKVWFLSLFD---R 321
            G+SE +RK L+  RDC NQI KAAMAINSS+LAEM+IP  Y+ +LPK    SL D   R
Sbjct: 269 GGISEKSRKHLRHKRDCANQIHKAAMAINSSILAEMDIPDTYMASLPKSGKASLGDIIYR 328

Query: 322 NVCTTSMFT 330
            +CTT  F+
Sbjct: 329 YMCTTDKFS 337


>30143.m001222 Rop guanine nucleotide exchange factor, putative
          Length = 590

 Score =  268 bits (685), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 136/231 (58%), Positives = 158/231 (68%), Gaps = 31/231 (13%)

Query: 82  DVKPEKRETDLSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWR 141
           D K ++  T +SE++MMKERFAKLLLGEDMSG GKGVCTALAISNAITNL  TVFG+LWR
Sbjct: 103 DSKFKQLSTKISEIDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCVTVFGQLWR 162

Query: 142 LEPLAPQKKSMWRREMEWLLSVSDSIVELVPSIQQFPGGGTYEVMVPRPRSDLYMNLPAL 201
           LEPL  +KKSMWRREMEWLL V D IVEL+PS Q FP G   E                 
Sbjct: 163 LEPLPSEKKSMWRREMEWLLCVGDHIVELIPSWQTFPDGSKLE----------------- 205

Query: 202 KKLDAMLISMLDGFCDTEFWYVDRGIILADGGDCDVYPSSIASARPSIRQEEKWWLPCPR 261
                    +LD F DTEFWYVD+GI+  D      +  +I       RQEEKWWLP PR
Sbjct: 206 --------EILDSFADTEFWYVDQGIVAPDADGSTSFRKAIQ------RQEEKWWLPVPR 251

Query: 262 VPSNGLSEDARKRLQQCRDCTNQILKAAMAINSSVLAEMEIPSAYLETLPK 312
           +P+ GLS+ +RK+L   R+CTNQILKAAMAINS  LAEM++P +YLETLPK
Sbjct: 252 LPAGGLSDKSRKQLNHTRECTNQILKAAMAINSIALAEMDVPYSYLETLPK 302


>30146.m003571 conserved hypothetical protein
          Length = 554

 Score =  268 bits (684), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 137/236 (58%), Positives = 172/236 (72%), Gaps = 17/236 (7%)

Query: 86  EKRETDLSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPL 145
           +K+ TD+   E MKERFAKLLLGEDMSGGGKGV +ALA+SNA TNL+A+VFGE  RLEP+
Sbjct: 100 DKQHTDM---EQMKERFAKLLLGEDMSGGGKGVSSALALSNATTNLAASVFGEQQRLEPM 156

Query: 146 APQKKSMWRREMEWLLSVSDSIVELVPSIQQFPGGGTYEVMVPRPRSDLYMNLPALKKLD 205
             ++K+ WR+E++WLLSVSD IVELVPS Q+   G   E+MV R R+DL+MN+PAL+KLD
Sbjct: 157 PAERKARWRKEIDWLLSVSDYIVELVPSQQKNKDGTNMEIMVTRQRTDLHMNIPALRKLD 216

Query: 206 AMLISMLDGFCD-TEFWYVDRGIILADGGDCDVYPSSIASARPSIRQEEKWWLPCPRVPS 264
           AMLI  LD F D  EF+Y+ +          D   S   SA+   R+++KWWLP  +VP 
Sbjct: 217 AMLIDCLDNFKDQNEFYYISK----------DAPDSEKGSAK---RKDDKWWLPTAKVPP 263

Query: 265 NGLSEDARKRLQQCRDCTNQILKAAMAINSSVLAEMEIPSAYLETLPKVWFLSLFD 320
           NGLSE +RK LQ  +DC NQ+LKAAMAIN+ VL+EMEIP  Y+E+LPK    SL D
Sbjct: 264 NGLSEASRKFLQYQKDCVNQVLKAAMAINAQVLSEMEIPENYIESLPKNGRASLGD 319


>29912.m005503 conserved hypothetical protein
          Length = 296

 Score =  233 bits (593), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 120/219 (54%), Positives = 155/219 (70%), Gaps = 15/219 (6%)

Query: 85  PEKRETDLSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEP 144
           P  R+   S+++MMKE+FAKLLLGEDMSGGGKGV +ALA+SNAITNL+A+VFGE  RLEP
Sbjct: 88  PSPRDKAPSDIDMMKEKFAKLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEQKRLEP 147

Query: 145 LAPQKKSMWRREMEWLLSVSDSIVELVPSIQQFPGGGTYEVMVPRPRSDLYMNLPALKKL 204
           ++P+ K  WR+E++WLLSV+D IVE VPS QQ   G   E+M  R RSDL MN+PAL+KL
Sbjct: 148 MSPETKIRWRKEIDWLLSVTDHIVEFVPS-QQSNNGINMEIMTTRQRSDLLMNIPALRKL 206

Query: 205 DAMLISMLDGFCD-TEFWYVDRGIILADGGDCDVYPSSIASARPSIRQEEKWWLPCPRVP 263
           D +LI  LD F +  EFWYV +    +D  + +  P          R ++KWW+P  +VP
Sbjct: 207 DTILIDQLDQFGNQNEFWYVSKD---SDESEQETPP----------RNDDKWWIPTVKVP 253

Query: 264 SNGLSEDARKRLQQCRDCTNQILKAAMAINSSVLAEMEI 302
             GLSE  R+ +Q  +D  NQ+LKAAMAIN+ VL+EMEI
Sbjct: 254 PEGLSEVTRRWIQFQKDSVNQVLKAAMAINAQVLSEMEI 292


>29827.m002639 Rop guanine nucleotide exchange factor, putative
          Length = 526

 Score =  225 bits (574), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 110/221 (49%), Positives = 151/221 (68%), Gaps = 15/221 (6%)

Query: 93  SEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKSM 152
           S+VE MKE+FAKLLLGED++GG KG+ TALA+SNAI NL+A+VFGELW+LEPL  + K  
Sbjct: 91  SDVETMKEKFAKLLLGEDITGGCKGLTTALALSNAIANLAASVFGELWKLEPLPEENKKK 150

Query: 153 WRREMEWLLSVSDSIVELVPSIQQFPGGGTYEVMVPRPRSDLYMNLPALKKLDAMLISML 212
           WR+E++WLLS ++ +VELVP+ Q    G T E+M P+ R+D+++NLPAL+KLD+MLI  L
Sbjct: 151 WRKELDWLLSPTNYMVELVPTKQNGANGRTLEIMTPKARADIHVNLPALQKLDSMLIETL 210

Query: 213 DGFCDTEFWYVDRGIILADGGDCDVYPSSIASAR-PSIRQEEKWWLPCPRVPSNGLSEDA 271
           D   + EFWY + G              S A  R  S +Q ++WWLP P+VP+ GLS+  
Sbjct: 211 DSMVNNEFWYSEVG--------------SRAEGRSKSTKQSKRWWLPLPQVPTTGLSDSE 256

Query: 272 RKRLQQCRDCTNQILKAAMAINSSVLAEMEIPSAYLETLPK 312
           RK+L        Q+ KAA +IN ++L EM +P+   + LPK
Sbjct: 257 RKKLLHKSKVVYQVFKAAKSINENILLEMPVPTIIRDALPK 297