Jatropha Genome Database

JcCA0043431.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0043431.10 + phase: 0 
         (265 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29932.m000590 ribose-5-phosphate isomerase, putative                  388   e-108
30128.m008607 ribose-5-phosphate isomerase, putative                  303   5e-83
29776.m000478 ribose-5-phosphate isomerase, putative                  102   1e-22

>29932.m000590 ribose-5-phosphate isomerase, putative
          Length = 264

 Score =  388 bits (997), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 196/266 (73%), Positives = 225/266 (84%), Gaps = 7/266 (2%)

Query: 1   MAIPYPHLSMETGLSPLSPYPVILT---QDELKKIAAYKAVEHVESGMVIGLGTGSTAKH 57
           MAIP P       L+ +   P+      QDELKKIAAYKAVE V+SGMV+GLGTGSTAKH
Sbjct: 1   MAIPCPPFIASEKLASMESSPLSPPLLSQDELKKIAAYKAVEFVQSGMVLGLGTGSTAKH 60

Query: 58  AVDRIGELLRQGKLKNIIGIPTSKKTHEQALSVGIPLSDLDSYPIIDLAIDGADEVDPNL 117
           AVDRI +LL QGKL NI+GIPTSKKT +QALS+GIPLSDLDS+P++DLAIDGADEVD +L
Sbjct: 61  AVDRIADLLHQGKLTNIVGIPTSKKTQKQALSLGIPLSDLDSHPVVDLAIDGADEVDSHL 120

Query: 118 NLVKGRGGSLLREKMIEGACKKFIVIVDESKLVKYVGGSGLAMPVEIVPFCWKFTAKRLQ 177
           NLVKGRGGSLLREKMIE ACKKFIVIVDE+KLV ++G +G AMPVE+VPFCWKFT ++LQ
Sbjct: 121 NLVKGRGGSLLREKMIESACKKFIVIVDETKLVPHIGANGGAMPVEVVPFCWKFTQEKLQ 180

Query: 178 ELFGYAGCVAKLRTNGSNGKENGGEPFVTDNGNYIVDLYLKGNMGDLKAASDAILRLAGV 237
            LF YAGCVAKLRT+ + GKE   EPFVTDNGNYIVDL+ K  +GDL+ ASD ILRLAGV
Sbjct: 181 SLFDYAGCVAKLRTD-NGGKE---EPFVTDNGNYIVDLFFKKEIGDLEVASDKILRLAGV 236

Query: 238 VEHGMFINMATTVVVAGELGVTIKNK 263
           VEHGMF++MATTV+VAGELG+TIKNK
Sbjct: 237 VEHGMFLDMATTVIVAGELGITIKNK 262


>30128.m008607 ribose-5-phosphate isomerase, putative
          Length = 284

 Score =  303 bits (776), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 151/241 (62%), Positives = 189/241 (78%), Gaps = 6/241 (2%)

Query: 23  ILTQDELKKIAAYKAVEHVESGMVIGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKK 82
           +LTQD+LKK+AA KAV++V+SGM++GLGTGSTA   V +IGELL+ G+LK+IIGIPTSK+
Sbjct: 50  VLTQDDLKKLAADKAVDYVKSGMILGLGTGSTAAFVVAKIGELLKSGELKDIIGIPTSKR 109

Query: 83  THEQALSVGIPLSDLDSYPIIDLAIDGADEVDPNLNLVKGRGGSLLREKMIEGACKKFIV 142
           T EQALS+GIPLS LD +P +DLAIDGADEVDP+LNLVKGRGG+LLREKM+E A  KF+V
Sbjct: 110 TEEQALSLGIPLSVLDEHPKLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVV 169

Query: 143 IVDESKLVKYVGGSGLAMPVEIVPFCWKFTAKRLQELFGYAGCVAKLRTNGSNGKENGGE 202
           + DE+KLV  +GGS LAMPVE+V FCWK+   RL+ELF   G  AKLR N        G+
Sbjct: 170 VADETKLVDGLGGSKLAMPVEVVQFCWKYNLIRLKELFKDEGVDAKLRLN------EDGK 223

Query: 203 PFVTDNGNYIVDLYLKGNMGDLKAASDAILRLAGVVEHGMFINMATTVVVAGELGVTIKN 262
           P+VTDN NYIVDLY +  + D  AA   I  L GVVEHG+F++MAT V++AG+ G+ +K 
Sbjct: 224 PYVTDNSNYIVDLYFENPIKDGYAAGKEISSLEGVVEHGLFLDMATAVIIAGKTGIDVKT 283

Query: 263 K 263
           K
Sbjct: 284 K 284


>29776.m000478 ribose-5-phosphate isomerase, putative
          Length = 262

 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 113/225 (50%), Gaps = 9/225 (4%)

Query: 45  MVIGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQALSVGIPLSDLDSYPIID 104
           MVIGLG+G  +  A+  +G  LR G LK+I+GIP S  +  +A   GI L        ID
Sbjct: 1   MVIGLGSGHASGMAIQYLGRQLRIGVLKDIVGIPMSIASASEAAKAGIRLDRYQDGSQID 60

Query: 105 LAIDGADEVDPN-LNLVKGRGG-----SLLREKMIEGACKKFIVIVDESKLVKYVGGSGL 158
            A D AD ++ + L  V GR       S ++EK I  A  + + ++ E +    + GS  
Sbjct: 61  FAFDDADVLEEDTLIAVVGRQKMQGEESFIQEKSILNAASRHVFMISEKQYKSRLDGS-- 118

Query: 159 AMPVEIVPFCWKFTAKRLQELFGYAGCVAKLRTNGSNGKENGGEPFVTDNGNYIVDLYLK 218
            +PV I P  W  TA+++ +LF     + +  + G  G   G  P VT  G+ ++D+   
Sbjct: 119 -IPVLIQPLSWMETAEQIDDLFLGDAEIWRRPSIGQAGPLGGDFPLVTREGHNVLDVIFT 177

Query: 219 GNMGDLKAASDAILRLAGVVEHGMFINMATTVVVAGELGVTIKNK 263
             +  L   ++++ ++ GVV+HG+      T V+A + G+ I N 
Sbjct: 178 SPIQSLAEVAESLDKVDGVVDHGIISKFPCTAVIASDSGLYIVNN 222