Jatropha Genome Database

JcCA0042831.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0042831.10 - phase: 0 /pseudo
         (342 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28623.m000399 dfg10 protein, putative                                 366   e-102
30131.m007142 dfg10 protein, putative                                 318   3e-87

>28623.m000399 dfg10 protein, putative
          Length = 342

 Score =  366 bits (939), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 189/287 (65%), Positives = 222/287 (77%), Gaps = 6/287 (2%)

Query: 1   MDIRLDWLLRAAWISATLPILIASFPSSRLNSFHQLLLGFSRRGKTMQPSS------HFT 54
           M+I LDWLLR AWI+ TLPIL+AS PSS LNSFHQLLLGF++RGK MQ SS       FT
Sbjct: 1   MEIHLDWLLRLAWIAGTLPILLASLPSSSLNSFHQLLLGFAKRGKIMQLSSSSSSFHKFT 60

Query: 55  VPQRFFLHFYLVGVALTTFLLIIIWGYAYKLASLDSGSLDYSTAASQLVGGSQIYSLHVS 114
           VPQRFFLHFYL+GV  TTFLLI+ W YAYK+  L SGSL YS A++ + GGS++   + S
Sbjct: 61  VPQRFFLHFYLLGVVWTTFLLIVTWHYAYKMTLLGSGSLIYSVASAHMAGGSRMLPFYKS 120

Query: 115 HFPTLAYRHKIWISVFLLLLMEMQVLRRLYETVYVLKYSSSARMHIFGYLVGLFFYTVAP 174
            F      +++W+SVF+LLLMEM VLRRLYETVYVLKYS SARMH+FGYL GLFFYT AP
Sbjct: 121 GFSNTELNYRVWLSVFMLLLMEMHVLRRLYETVYVLKYSPSARMHVFGYLTGLFFYTAAP 180

Query: 175 LTLCYSCAFEAFNFAAYQMIEANVKNQQTVAVDFDWWRLVKPFVKLGWCHWVGAAIFAWG 234
           L+LC+ C FEA N A Y+ IE NVKN++   +DFDWW  + P ++LGWC W GAAIFA G
Sbjct: 181 LSLCHFCIFEALNVAEYRAIEMNVKNEEISPIDFDWWGYMTPILQLGWCQWAGAAIFACG 240

Query: 235 WLHQLRCHAILGSLREDREQNEEYGIPRGDWFEIVSSPHYLAEMRRY 281
           W+HQ RCHAILGSLR+ R Q +EY IP GDWFE+VSSPHYLAEM  Y
Sbjct: 241 WVHQQRCHAILGSLRKQRRQVDEYLIPHGDWFEMVSSPHYLAEMIIY 287


>30131.m007142 dfg10 protein, putative
          Length = 339

 Score =  318 bits (814), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 157/284 (55%), Positives = 196/284 (69%), Gaps = 3/284 (1%)

Query: 1   MDIRLDWLLRAAWISATLPILIASFPSSRLNSFHQLLLGFSRRGKTMQPSSH--FTVPQR 58
           M+  L   LR AWI+  LPI+IAS P  +L SFH+++LGFS+RGK M+ SS   FTVPQR
Sbjct: 1   MEFGLVGFLRVAWIAGILPIVIASLPFPKLGSFHRVILGFSKRGKIMESSSQYKFTVPQR 60

Query: 59  FFLHFYLVGVALTTFLLIIIWGYAYKLASLDSGSLDYSTAASQLVGGSQIYSLHVSHFPT 118
           FF HFY+V V  TTFLL+  W +AYK A L S    YS  +S L GGS I+S   S   +
Sbjct: 61  FFTHFYVVAVVWTTFLLVATWLFAYKTAPLISEPFLYSNISSYLAGGSNIFSFRRSRLIS 120

Query: 119 LAYRHKIWISVFLLLLMEMQVLRRLYETVYVLKYSSSARMHIFGYLVGLFFYTVAPLTLC 178
           + +R+++W+SVFLLLLME+Q LRRL E  YV  YS SARMHIF YL GLFFYT APL+LC
Sbjct: 121 VEHRYRVWLSVFLLLLMEVQALRRLLENSYVFNYSPSARMHIFAYLTGLFFYTAAPLSLC 180

Query: 179 YSCAFEAFNFAAYQMIEANVKNQQTV-AVDFDWWRLVKPFVKLGWCHWVGAAIFAWGWLH 237
            +CA E F F   +  +  +K +  + +++FDWW  V P +KLGW  W+GA +F WG +H
Sbjct: 181 ATCALEVFKFGKDEAAQFIIKGKSAMHSIEFDWWDFVNPLLKLGWYQWIGATLFLWGSIH 240

Query: 238 QLRCHAILGSLREDREQNEEYGIPRGDWFEIVSSPHYLAEMRRY 281
           Q  CH ILGSLRE   + +EY IP GDWFEIVSSPHYLAE+  Y
Sbjct: 241 QHHCHTILGSLREHGRKVDEYVIPHGDWFEIVSSPHYLAEIVIY 284