Jatropha Genome Database

JcCA0042101.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0042101.10 + phase: 0 
         (462 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m007228 conserved hypothetical protein                          767   0.0  

>30131.m007228 conserved hypothetical protein
          Length = 1492

 Score =  767 bits (1981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/443 (85%), Positives = 409/443 (92%), Gaps = 10/443 (2%)

Query: 1   MTKVYGTGAYDFKRHRVAEYPVELQTQLSDKPVESKPGSTLPSSITLSEIQRDRLTKIAA 60
           MTKVYGTGAYDFKRHRVAEYPVE Q   SD    +KPGSTLP+SITLSEIQRDRLTKIAA
Sbjct: 1   MTKVYGTGAYDFKRHRVAEYPVESQALSSD----NKPGSTLPNSITLSEIQRDRLTKIAA 56

Query: 61  ENWLKTGGTESDGTKKKEFDPELVKQIYETELKVKEGRKTVPLQRVMILEVSQYLENYLW 120
            NWLKTGG+   GT+ + FDP++VKQIYETELKVKEGRK VPLQRVMILEVSQYLENYLW
Sbjct: 57  ANWLKTGGS---GTESEGFDPDVVKQIYETELKVKEGRKPVPLQRVMILEVSQYLENYLW 113

Query: 121 PNFDPETATFEHVMSMILMINEKFRENVAAWLCFYDRKDVFKGFLERVLQLKEGRELSIS 180
           PNFDPETA+FEHVMSMILMINEKFRENVAAWLCFYDRKDVF+GFLERVL+LKEGRELSI+
Sbjct: 114 PNFDPETASFEHVMSMILMINEKFRENVAAWLCFYDRKDVFRGFLERVLKLKEGRELSIA 173

Query: 181 EKTNYLVFMINAFQSLEDEIVSETVLKLGSLQSWHCLSYGRFQMELCLNPELIKKWKRMV 240
           EK NYLVFMINAFQSLEDEIVSETVLKLG LQSWH LSYGRFQMELCLNP+L+KKWKRM+
Sbjct: 174 EKINYLVFMINAFQSLEDEIVSETVLKLGGLQSWHSLSYGRFQMELCLNPDLVKKWKRMI 233

Query: 241 KREIKEAMKGGQPFDPSTSLEVKFLRNLIEEFLDVLDFQIFPQK--SSING-DGLASGFE 297
           K+E KEAMK G+PFDP T+LEVKFLRNL+EEFLDV+ +    +K  +S++G DGL  GF+
Sbjct: 234 KKEAKEAMKRGEPFDPLTALEVKFLRNLVEEFLDVIFYLRTMKKLQNSVDGDDGLHVGFD 293

Query: 298 EVDDSAVLYCERFMEFLIDLLSQLPTRRYLRPLVADVAVVAKCHLSALYKHEKGKLFAQL 357
           EVDD+A+LYCERFMEFLIDLLSQLPTRRYLRPLVADVAVVAKCHLSALY+HEKGKLFAQL
Sbjct: 294 EVDDAAILYCERFMEFLIDLLSQLPTRRYLRPLVADVAVVAKCHLSALYRHEKGKLFAQL 353

Query: 358 VDLLQFYERFEINDHSGTQLTDDEVLQSHYDRFQAFQLLAFKKIPKLRELALSNIGAIHK 417
           VDLLQFYERFEINDH GTQLTDDEVLQSHYDRFQAFQLLAFK +PKLRELALSNIGAI+K
Sbjct: 354 VDLLQFYERFEINDHVGTQLTDDEVLQSHYDRFQAFQLLAFKTMPKLRELALSNIGAINK 413

Query: 418 RADLSKKLSVLSPEELKDLVCAR 440
           RADLSKKLSVLSPEELKDLVC +
Sbjct: 414 RADLSKKLSVLSPEELKDLVCCK 436